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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G61380

Z-value: 0.52

Transcription factors associated with AT5G61380

Gene Symbol Gene ID Gene Info
AT5G61380 CCT motif -containing response regulator protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
TOC1arTal_v1_Chr5_+_24674963_246749630.203.1e-01Click!

Activity profile of AT5G61380 motif

Sorted Z-values of AT5G61380 motif

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr1_-_467873_467880 1.52 AT1G02340.2
AT1G02340.1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr1_-_37757_37871 0.91 AT1G01060.3
AT1G01060.2
AT1G01060.4
AT1G01060.1
AT1G01060.6
AT1G01060.7
AT1G01060.5
Homeodomain-like superfamily protein
arTal_v1_Chr4_+_9449114_9449114 0.89 AT4G16780.1
homeobox protein 2
arTal_v1_Chr5_+_206432_206432 0.88 AT5G01520.2
AT5G01520.1
RING/U-box superfamily protein
arTal_v1_Chr1_-_37230_37230 0.75 AT1G01060.8
Homeodomain-like superfamily protein
arTal_v1_Chr1_+_11827359_11827467 0.73 AT1G32700.1
AT1G32700.2
PLATZ transcription factor family protein
arTal_v1_Chr1_-_156011_156011 0.73 AT1G01420.1
UDP-glucosyl transferase 72B3
arTal_v1_Chr1_-_156178_156178 0.73 AT1G01420.2
UDP-glucosyl transferase 72B3
arTal_v1_Chr3_+_151725_151725 0.60 AT3G01400.1
ARM repeat superfamily protein
arTal_v1_Chr3_+_22804998_22804998 0.57 AT3G61630.1
cytokinin response factor 6
arTal_v1_Chr1_-_28318362_28318375 0.54 AT1G75450.1
AT1G75450.2
cytokinin oxidase 5
arTal_v1_Chr4_-_9598282_9598282 0.42 AT4G17070.1
peptidyl-prolyl cis-trans isomerase
arTal_v1_Chr2_+_19246681_19246681 0.42 AT2G46830.3
circadian clock associated 1
arTal_v1_Chr1_+_2152798_2152880 0.42 AT1G07010.1
AT1G07010.2
AT1G07010.3
Calcineurin-like metallo-phosphoesterase superfamily protein
arTal_v1_Chr2_+_19245591_19245684 0.41 AT2G46830.1
AT2G46830.2
circadian clock associated 1
arTal_v1_Chr1_+_26612359_26612359 0.40 AT1G70580.2
AT1G70580.1
alanine-2-oxoglutarate aminotransferase 2
arTal_v1_Chr1_+_26612999_26612999 0.39 AT1G70580.3
alanine-2-oxoglutarate aminotransferase 2
arTal_v1_Chr4_-_9779939_9779939 0.39 AT4G17550.1
Major facilitator superfamily protein
arTal_v1_Chr1_+_26612768_26612768 0.39 AT1G70580.4
alanine-2-oxoglutarate aminotransferase 2
arTal_v1_Chr5_+_579744_579852 0.36 AT5G02580.1
AT5G02580.3
AT5G02580.2
argininosuccinate lyase
arTal_v1_Chr5_-_19218007_19218007 0.32 AT5G47370.1
Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein
arTal_v1_Chr5_+_4394283_4394283 0.31 AT5G13640.3
phospholipid:diacylglycerol acyltransferase
arTal_v1_Chr5_+_25113948_25113948 0.29 AT5G62570.4
AT5G62570.1
AT5G62570.3
Calmodulin binding protein-like protein
arTal_v1_Chr2_+_13381767_13381767 0.29 AT2G31380.1
salt tolerance homologue
arTal_v1_Chr4_-_6840036_6840036 0.28 AT4G11220.1
VIRB2-interacting protein 2
arTal_v1_Chr4_+_15583332_15583363 0.27 AT4G32280.1
AT4G32280.2
AT4G32280.3
indole-3-acetic acid inducible 29
arTal_v1_Chr3_-_21830207_21830207 0.27 AT3G59060.3
phytochrome interacting factor 3-like 6
arTal_v1_Chr5_+_4392937_4392937 0.27 AT5G13640.1
AT5G13640.2
phospholipid:diacylglycerol acyltransferase
arTal_v1_Chr3_-_21830507_21830630 0.26 AT3G59060.1
AT3G59060.4
phytochrome interacting factor 3-like 6
arTal_v1_Chr5_-_25920254_25920254 0.26 AT5G64840.1
general control non-repressible 5
arTal_v1_Chr3_-_21830837_21830837 0.25 AT3G59060.2
phytochrome interacting factor 3-like 6
arTal_v1_Chr1_-_5955037_5955143 0.23 AT1G17370.2
AT1G17370.1
oligouridylate binding protein 1B
arTal_v1_Chr3_+_22733243_22733247 0.22 AT3G61430.1
AT3G61430.2
plasma membrane intrinsic protein 1A
arTal_v1_Chr5_+_25114421_25114421 0.22 AT5G62570.2
Calmodulin binding protein-like protein
arTal_v1_Chr4_+_9601348_9601348 0.20 AT4G17080.1
Histone H3 K4-specific methyltransferase SET7/9 family protein
arTal_v1_Chr4_-_18077369_18077369 0.18 AT4G38700.1
Disease resistance-responsive (dirigent-like protein) family protein
arTal_v1_Chr3_-_21471694_21471694 0.18 AT3G57990.1
hypothetical protein
arTal_v1_Chr2_-_19297529_19297537 0.17 AT2G46970.2
AT2G46970.3
phytochrome interacting factor 3-like 1
arTal_v1_Chr1_-_27595142_27595197 0.17 AT1G73390.4
AT1G73390.3
AT1G73390.5
AT1G73390.2
Endosomal targeting BRO1-like domain-containing protein
arTal_v1_Chr5_-_24953232_24953362 0.15 AT5G62130.2
AT5G62130.3
AT5G62130.1
AT5G62130.4
Per1-like family protein
arTal_v1_Chr5_+_20192159_20192159 0.14 AT5G49700.1
Putative AT-hook DNA-binding family protein
arTal_v1_Chr1_-_27594510_27594615 0.12 AT1G73390.1
AT1G73390.7
Endosomal targeting BRO1-like domain-containing protein
arTal_v1_Chr5_-_265633_265633 0.11 AT5G01710.1
methyltransferase
arTal_v1_Chr4_-_16950620_16950620 0.09 AT4G35780.1
ACT-like protein tyrosine kinase family protein
arTal_v1_Chr3_+_9867652_9867652 0.08 AT3G26810.1
auxin signaling F-box 2
arTal_v1_Chr5_+_437365_437365 0.08 AT5G02200.2
AT5G02200.1
far-red-elongated hypocotyl1-like protein
arTal_v1_Chr4_+_14192569_14192569 0.06 AT4G28720.1
Flavin-binding monooxygenase family protein
arTal_v1_Chr4_-_11956918_11956918 0.06 AT4G22756.1
sterol C4-methyl oxidase 1-2
arTal_v1_Chr4_+_2618372_2618372 0.05 AT4G05100.1
myb domain protein 74
arTal_v1_Chr2_+_385171_385171 0.04 AT2G01850.1
endoxyloglucan transferase A3
arTal_v1_Chr2_-_19297858_19297858 0.03 AT2G46970.1
phytochrome interacting factor 3-like 1
arTal_v1_Chr1_-_27595752_27595752 0.01 AT1G73390.6
Endosomal targeting BRO1-like domain-containing protein
arTal_v1_Chr5_+_18835605_18835618 0.01 AT5G46450.2
AT5G46450.1
AT5G46450.3
Disease resistance protein (TIR-NBS-LRR class) family

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G61380

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.5 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.1 1.2 GO:0009080 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.1 0.9 GO:0080190 lateral growth(GO:0080190)
0.1 0.5 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 2.3 GO:0009585 phototransduction(GO:0007602) red, far-red light phototransduction(GO:0009585)
0.1 0.3 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.0 0.4 GO:0072506 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.0 0.6 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.0 0.3 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.1 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.0 0.9 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.0 0.4 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 GO:0098827 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 GO:0047958 glycine:2-oxoglutarate aminotransferase activity(GO:0047958)
0.2 0.6 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.2 1.1 GO:0019904 protein domain specific binding(GO:0019904)
0.1 0.5 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 1.5 GO:0080043 quercetin 3-O-glucosyltransferase activity(GO:0080043)
0.0 0.2 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.1 GO:0010011 auxin binding(GO:0010011)