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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G41315

Z-value: 0.51

Transcription factors associated with AT5G41315

Gene Symbol Gene ID Gene Info
AT5G41315 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
GL3arTal_v1_Chr5_+_16529090_16529090-0.633.1e-04Click!

Activity profile of AT5G41315 motif

Sorted Z-values of AT5G41315 motif

Promoter Log-likelihood Transcript Gene Gene Info
arTal_v1_Chr3_-_197974_197974 2.47 AT3G01500.1
carbonic anhydrase 1
arTal_v1_Chr3_-_198160_198160 2.44 AT3G01500.2
carbonic anhydrase 1
arTal_v1_Chr3_-_198664_198664 2.41 AT3G01500.3
carbonic anhydrase 1
arTal_v1_Chr3_-_197564_197564 2.35 AT3G01500.4
carbonic anhydrase 1
arTal_v1_Chr5_+_8863224_8863224 2.03 AT5G25460.1
transmembrane protein, putative (Protein of unknown function, DUF642)
arTal_v1_Chr5_-_7738535_7738535 1.68 AT5G23060.2
AT5G23060.1
calcium sensing receptor
arTal_v1_Chr5_-_25373904_25373904 1.63 AT5G63310.1
nucleoside diphosphate kinase 2
arTal_v1_Chr1_-_28419635_28419635 1.63 AT1G75680.1
glycosyl hydrolase 9B7
arTal_v1_Chr3_-_5469594_5469594 1.56 AT3G16140.1
photosystem I subunit H-1
arTal_v1_Chr1_+_13208683_13208683 1.54 AT1G35680.1
Ribosomal protein L21
arTal_v1_Chr5_-_17581275_17581275 1.52 AT5G43750.1
NAD(P)H dehydrogenase 18
arTal_v1_Chr2_-_15137012_15137012 1.48 AT2G36050.1
ovate family protein 15
arTal_v1_Chr4_-_18428412_18428578 1.47 AT4G39710.2
AT4G39710.3
AT4G39710.1
FK506-binding protein 16-2
arTal_v1_Chr5_+_18528267_18528267 1.40 AT5G45670.1
GDSL-like Lipase/Acylhydrolase superfamily protein
arTal_v1_Chr3_+_18417568_18417568 1.30 AT3G49670.1
Leucine-rich receptor-like protein kinase family protein
arTal_v1_Chr2_+_11550705_11550841 1.27 AT2G27060.1
AT2G27060.2
AT2G27060.3
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr2_-_14322082_14322082 1.22 AT2G33850.1
E6-like protein
arTal_v1_Chr1_+_27452748_27452766 1.18 AT1G72970.1
AT1G72970.2
Glucose-methanol-choline (GMC) oxidoreductase family protein
arTal_v1_Chr2_+_18417243_18417243 1.17 AT2G44640.1
TRIGALACTOSYLDIACYLGLYCEROL-like protein
arTal_v1_Chr5_+_4535367_4535401 1.16 AT5G14060.1
AT5G14060.2
AT5G14060.3
Aspartate kinase family protein
arTal_v1_Chr1_+_6460598_6460598 1.11 AT1G18730.3
AT1G18730.2
AT1G18730.4
NDH dependent flow 6
arTal_v1_Chr4_+_14566183_14566265 1.11 AT4G29740.3
AT4G29740.2
AT4G29740.1
cytokinin oxidase 4
arTal_v1_Chr5_-_26845294_26845294 1.10 AT5G67280.1
receptor-like kinase
arTal_v1_Chr2_+_15117015_15117015 1.08 AT2G36000.2
AT2G36000.1
Mitochondrial transcription termination factor family protein
arTal_v1_Chr3_-_23089357_23089357 1.05 AT3G62390.2
AT3G62390.1
TRICHOME BIREFRINGENCE-LIKE 6
arTal_v1_Chr4_-_18068293_18068293 1.02 AT4G38660.1
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr4_-_18067873_18067873 1.01 AT4G38660.2
Pathogenesis-related thaumatin superfamily protein
arTal_v1_Chr5_-_22232949_22232949 0.97 AT5G54720.1
Ankyrin repeat family protein
arTal_v1_Chr5_-_26555781_26555886 0.97 AT5G66530.1
AT5G66530.2
AT5G66530.3
Galactose mutarotase-like superfamily protein
arTal_v1_Chr4_+_13992210_13992210 0.96 AT4G28220.2
AT4G28220.1
NAD(P)H dehydrogenase B1
arTal_v1_Chr1_+_6460844_6460844 0.93 AT1G18730.5
NDH dependent flow 6
arTal_v1_Chr1_-_25714807_25714807 0.92 AT1G68530.2
3-ketoacyl-CoA synthase 6
arTal_v1_Chr1_-_25715024_25715024 0.91 AT1G68530.1
3-ketoacyl-CoA synthase 6
arTal_v1_Chr1_+_6460403_6460403 0.90 AT1G18730.1
NDH dependent flow 6
arTal_v1_Chr2_+_19492867_19492909 0.90 AT2G47500.1
AT2G47500.2
P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein
arTal_v1_Chr5_+_6138717_6138717 0.89 AT5G18500.3
AT5G18500.4
AT5G18500.5
Protein kinase superfamily protein
arTal_v1_Chr1_-_28453820_28453820 0.88 AT1G75780.1
tubulin beta-1 chain
arTal_v1_Chr5_+_23903872_23903872 0.87 AT5G59250.1
Major facilitator superfamily protein
arTal_v1_Chr3_-_7434743_7434743 0.86 AT3G21190.1
O-fucosyltransferase family protein
arTal_v1_Chr5_-_18776735_18776839 0.86 AT5G46290.2
AT5G46290.3
AT5G46290.1
3-ketoacyl-acyl carrier protein synthase I
arTal_v1_Chr5_+_6138242_6138242 0.84 AT5G18500.1
AT5G18500.2
Protein kinase superfamily protein
arTal_v1_Chr1_+_5361865_5361865 0.83 AT1G15570.1
CYCLIN A2;3
arTal_v1_Chr3_-_5812690_5812780 0.81 AT3G17040.2
AT3G17040.4
AT3G17040.3
AT3G17040.1
high chlorophyll fluorescent 107
arTal_v1_Chr1_+_17065858_17065858 0.81 AT1G45130.2
beta-galactosidase 5
arTal_v1_Chr1_+_17065111_17065111 0.79 AT1G45130.1
beta-galactosidase 5
arTal_v1_Chr5_-_26555447_26555447 0.77 AT5G66530.4
Galactose mutarotase-like superfamily protein
arTal_v1_Chr4_+_15779911_15779911 0.76 AT4G32710.1
Protein kinase superfamily protein
arTal_v1_Chr3_-_3782954_3782981 0.75 AT3G11945.2
AT3G11945.1
homogentisate prenyltransferase
arTal_v1_Chr3_-_1958304_1958304 0.74 AT3G06430.1
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_+_26884203_26884303 0.74 AT5G67385.3
AT5G67385.1
AT5G67385.5
AT5G67385.4
Phototropic-responsive NPH3 family protein
arTal_v1_Chr1_+_3611490_3611490 0.73 AT1G10850.1
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr5_+_21988457_21988457 0.72 AT5G54180.1
plastid transcriptionally active 15
arTal_v1_Chr3_-_19861097_19861178 0.72 AT3G53560.1
AT3G53560.2
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr5_+_6138927_6138927 0.71 AT5G18500.6
Protein kinase superfamily protein
arTal_v1_Chr2_-_18873972_18873972 0.70 AT2G45850.3
AT2G45850.1
AT hook motif DNA-binding family protein
arTal_v1_Chr3_+_22607099_22607130 0.70 AT3G61080.1
AT3G61080.2
Protein kinase superfamily protein
arTal_v1_Chr5_-_26899736_26899736 0.69 AT5G67411.1
GRAS family transcription factor
arTal_v1_Chr1_-_9024081_9024081 0.68 AT1G26100.1
Cytochrome b561/ferric reductase transmembrane protein family
arTal_v1_Chr3_+_18340934_18340976 0.68 AT3G49470.1
AT3G49470.2
nascent polypeptide-associated complex subunit alpha-like protein 2
arTal_v1_Chr5_+_26883663_26883663 0.67 AT5G67385.2
Phototropic-responsive NPH3 family protein
arTal_v1_Chr3_+_19188844_19188844 0.66 AT3G51740.1
inflorescence meristem receptor-like kinase 2
arTal_v1_Chr2_-_18873684_18873684 0.66 AT2G45850.2
AT hook motif DNA-binding family protein
arTal_v1_Chr4_+_148958_148958 0.66 AT4G00340.2
receptor-like protein kinase 4
arTal_v1_Chr4_+_148612_148612 0.65 AT4G00340.1
receptor-like protein kinase 4
arTal_v1_Chr2_+_9354842_9354842 0.65 AT2G21960.1
transmembrane protein
arTal_v1_Chr1_+_9515114_9515114 0.65 AT1G27400.1
Ribosomal protein L22p/L17e family protein
arTal_v1_Chr1_+_2642072_2642212 0.65 AT1G08390.1
AT1G08390.2
recQ-mediated instability-like protein
arTal_v1_Chr3_+_6632637_6632676 0.64 AT3G19180.1
AT3G19180.2
plastid division protein
arTal_v1_Chr2_+_19534473_19534503 0.63 AT2G47630.1
AT2G47630.2
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr4_+_13515432_13515432 0.63 AT4G26900.1
HIS HF
arTal_v1_Chr2_+_17044932_17044932 0.63 AT2G40840.1
disproportionating enzyme 2
arTal_v1_Chr1_+_25719958_25719958 0.62 AT1G68540.1
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr4_+_9854322_9854322 0.62 AT4G17700.1
hypothetical protein
arTal_v1_Chr1_-_17973303_17973402 0.61 AT1G48610.2
AT1G48610.1
AT hook motif-containing protein
arTal_v1_Chr4_-_16154722_16154742 0.61 AT4G33625.2
AT4G33625.3
AT4G33625.1
vacuole protein
arTal_v1_Chr2_+_19535143_19535143 0.61 AT2G47630.3
alpha/beta-Hydrolases superfamily protein
arTal_v1_Chr5_+_280674_280674 0.59 AT5G01740.1
Nuclear transport factor 2 (NTF2) family protein
arTal_v1_Chr2_-_9460908_9460919 0.59 AT2G22250.1
AT2G22250.2
AT2G22250.3
aspartate aminotransferase
arTal_v1_Chr3_-_3119391_3119391 0.59 AT3G10113.1
Homeodomain-like superfamily protein
arTal_v1_Chr1_+_29741728_29741728 0.59 AT1G79060.1
TPRXL
arTal_v1_Chr5_-_3249911_3249966 0.58 AT5G10330.7
AT5G10330.6
AT5G10330.2
AT5G10330.8
histidinol phosphate aminotransferase 1
arTal_v1_Chr1_-_19476234_19476234 0.58 AT1G52300.1
Zinc-binding ribosomal protein family protein
arTal_v1_Chr3_+_484256_484287 0.57 AT3G02370.1
AT3G02370.4
AT3G02370.2
AT3G02370.3
tRNA-splicing endonuclease subunit
arTal_v1_Chr3_+_5061681_5061681 0.57 AT3G15030.2
AT3G15030.3
AT3G15030.4
AT3G15030.1
TCP family transcription factor 4
arTal_v1_Chr4_+_13844059_13844059 0.56 AT4G27760.1
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr1_+_24901882_24901978 0.55 AT1G66760.2
AT1G66760.1
AT1G66760.4
AT1G66760.3
MATE efflux family protein
arTal_v1_Chr3_-_22316611_22316625 0.55 AT3G60370.1
AT3G60370.2
FKBP-like peptidyl-prolyl cis-trans isomerase family protein
arTal_v1_Chr5_+_1319074_1319074 0.54 AT5G04590.1
sulfite reductase
arTal_v1_Chr2_-_8730525_8730525 0.53 AT2G20240.1
GPI-anchored adhesin-like protein, putative (DUF3741)
arTal_v1_Chr1_+_29210496_29210496 0.53 AT1G77720.1
putative protein kinase 1
arTal_v1_Chr1_-_27541952_27541952 0.53 AT1G73230.1
Nascent polypeptide-associated complex NAC
arTal_v1_Chr2_+_11178064_11178110 0.52 AT2G26260.1
AT2G26260.2
3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2
arTal_v1_Chr4_-_16116383_16116383 0.52 AT4G33500.1
Protein phosphatase 2C family protein
arTal_v1_Chr5_-_3250648_3250648 0.51 AT5G10330.4
AT5G10330.5
AT5G10330.3
histidinol phosphate aminotransferase 1
arTal_v1_Chr3_+_5344989_5344989 0.51 AT3G15800.1
Glycosyl hydrolase superfamily protein
arTal_v1_Chr3_+_8941066_8941066 0.50 AT3G24520.1
heat shock transcription factor C1
arTal_v1_Chr2_+_868359_868359 0.50 AT2G02980.1
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr3_+_22470519_22470519 0.49 AT3G60810.1
AT3G60810.2
DUF1499 family protein
arTal_v1_Chr1_-_26354613_26354613 0.49 AT1G69970.2
CLAVATA3/ESR-RELATED 26
arTal_v1_Chr3_+_9122197_9122215 0.49 AT3G25030.4
AT3G25030.1
AT3G25030.2
RING/U-box superfamily protein
arTal_v1_Chr1_-_28117405_28117422 0.48 AT1G74840.2
AT1G74840.1
Homeodomain-like superfamily protein
arTal_v1_Chr1_+_25720172_25720172 0.48 AT1G68540.2
NAD(P)-binding Rossmann-fold superfamily protein
arTal_v1_Chr4_+_17515042_17515042 0.48 AT4G37220.1
Cold acclimation protein WCOR413 family
arTal_v1_Chr5_-_26842104_26842104 0.48 AT5G67270.1
end binding protein 1C
arTal_v1_Chr1_+_3639835_3639835 0.46 AT1G10910.2
AT1G10910.1
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr5_-_22230500_22230500 0.46 AT5G54710.1
Ankyrin repeat family protein
arTal_v1_Chr1_-_3103677_3103677 0.46 AT1G09575.2
calcium uniporter-like protein (DUF607)
arTal_v1_Chr5_-_22230663_22230663 0.46 AT5G54710.2
Ankyrin repeat family protein
arTal_v1_Chr3_+_5566367_5566367 0.46 AT3G16400.2
nitrile specifier protein 1
arTal_v1_Chr3_+_5566083_5566083 0.46 AT3G16400.1
nitrile specifier protein 1
arTal_v1_Chr4_+_2417800_2417813 0.45 AT4G04750.3
AT4G04750.2
AT4G04750.1
Major facilitator superfamily protein
arTal_v1_Chr1_+_3849201_3849201 0.45 AT1G11440.1
hypothetical protein
arTal_v1_Chr2_-_8240018_8240018 0.45 AT2G18990.1
thioredoxin-like/ATP-binding protein
arTal_v1_Chr5_-_17877658_17877658 0.45 AT5G44370.1
phosphate transporter 4;6
arTal_v1_Chr1_-_22512271_22512333 0.44 AT1G61100.1
AT1G61100.2
disease resistance protein (TIR class)
arTal_v1_Chr1_-_3137684_3137684 0.43 AT1G09690.1
Translation protein SH3-like family protein
arTal_v1_Chr5_-_900298_900298 0.42 AT5G03555.1
permease, cytosine/purines, uracil, thiamine, allantoin family protein
arTal_v1_Chr1_-_29993724_29993766 0.42 AT1G79700.1
AT1G79700.3
AT1G79700.2
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr2_+_17922019_17922021 0.42 AT2G43110.1
AT2G43110.2
U3 containing 90S pre-ribosomal complex subunit
arTal_v1_Chr1_-_22368714_22368714 0.41 AT1G60770.1
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr1_+_27780855_27780855 0.41 AT1G73875.1
DNAse I-like superfamily protein
arTal_v1_Chr4_+_16118830_16118917 0.41 AT4G33520.2
AT4G33520.1
AT4G33520.3
AT4G33520.4
P-type ATP-ase 1
arTal_v1_Chr1_+_91342_91376 0.41 AT1G01220.4
AT1G01220.1
AT1G01220.3
AT1G01220.2
AT1G01220.6
AT1G01220.5
L-fucokinase/GDP-L-fucose pyrophosphorylase
arTal_v1_Chr4_-_13383641_13383641 0.40 AT4G26500.1
chloroplast sulfur E
arTal_v1_Chr2_+_9488413_9488542 0.40 AT2G22330.2
AT2G22330.1
cytochrome P450, family 79, subfamily B, polypeptide 3
arTal_v1_Chr1_-_3103176_3103176 0.40 AT1G09575.1
calcium uniporter-like protein (DUF607)
arTal_v1_Chr3_+_1086516_1086516 0.40 AT3G04140.1
Ankyrin repeat family protein
arTal_v1_Chr5_+_7741792_7741792 0.39 AT5G23070.1
Thymidine kinase
arTal_v1_Chr5_+_454777_454777 0.39 AT5G02250.1
Ribonuclease II/R family protein
arTal_v1_Chr2_-_12702443_12702443 0.39 AT2G29720.1
FAD/NAD(P)-binding oxidoreductase family protein
arTal_v1_Chr5_+_5494228_5494228 0.38 AT5G16720.1
caldesmon-like protein (Protein of unknown function, DUF593)
arTal_v1_Chr1_-_26807183_26807183 0.38 AT1G71060.1
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr2_+_9874907_9874907 0.38 AT2G23180.1
cytochrome P450, family 96, subfamily A, polypeptide 1
arTal_v1_Chr5_-_24574387_24574387 0.38 AT5G61070.1
histone deacetylase of the RPD3/HDA1 superfamily 18
arTal_v1_Chr4_+_17516424_17516424 0.37 AT4G37230.1
Photosystem II manganese-stabilising protein (PsbO) family
arTal_v1_Chr5_-_5642623_5642623 0.37 AT5G17160.1
aspartic/glutamic acid-rich protein
arTal_v1_Chr1_+_7029629_7029629 0.36 AT1G20300.1
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr1_-_2751620_2751620 0.36 AT1G08640.1
Chloroplast J-like domain 1
arTal_v1_Chr4_+_9771297_9771297 0.35 AT4G17520.1
Hyaluronan / mRNA binding family
arTal_v1_Chr4_+_8309384_8309384 0.35 AT4G14450.1
hypothetical protein
arTal_v1_Chr1_+_27781006_27781006 0.35 AT1G73875.2
AT1G73875.3
DNAse I-like superfamily protein
arTal_v1_Chr1_+_91642_91692 0.35 AT1G01220.7
AT1G01220.8
L-fucokinase/GDP-L-fucose pyrophosphorylase
arTal_v1_Chr3_-_1970946_1970946 0.34 AT3G06435.2
Expressed protein
arTal_v1_Chr3_+_9124270_9124270 0.34 AT3G25040.1
endoplasmic reticulum retention defective 2B
arTal_v1_Chr5_-_277641_277682 0.34 AT5G01730.9
AT5G01730.3
AT5G01730.8
AT5G01730.10
AT5G01730.4
AT5G01730.11
SCAR family protein 4
arTal_v1_Chr2_-_7685176_7685202 0.34 AT2G17695.2
AT2G17695.1
AT2G17695.3
outer envelope protein
arTal_v1_Chr4_+_18432659_18432659 0.34 AT4G39730.1
Lipase/lipooxygenase, PLAT/LH2 family protein
arTal_v1_Chr2_-_11145103_11145103 0.34 AT2G26180.1
IQ-domain 6
arTal_v1_Chr5_-_26425448_26425448 0.34 AT5G66080.1
Protein phosphatase 2C family protein
arTal_v1_Chr1_+_26545189_26545414 0.33 AT1G70430.2
AT1G70430.3
AT1G70430.1
AT1G70430.4
Protein kinase superfamily protein
arTal_v1_Chr3_+_2044352_2044352 0.33 AT3G06560.1
poly(A) polymerase 3
arTal_v1_Chr1_+_28449905_28449905 0.33 AT1G75770.1
hypothetical protein
arTal_v1_Chr5_+_16394462_16394509 0.33 AT5G40910.2
AT5G40910.4
AT5G40910.5
AT5G40910.3
AT5G40910.6
AT5G40910.1
AT5G40910.7
Disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr4_-_15317135_15317160 0.33 AT4G31600.2
AT4G31600.1
UDP-N-acetylglucosamine (UAA) transporter family
arTal_v1_Chr5_-_3250964_3250964 0.32 AT5G10330.1
histidinol phosphate aminotransferase 1
arTal_v1_Chr1_-_5858446_5858550 0.32 AT1G17140.1
AT1G17140.2
interactor of constitutive active rops 1
arTal_v1_Chr1_-_29993058_29993058 0.32 AT1G79700.4
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr2_-_12722463_12722527 0.32 AT2G29790.2
AT2G29790.3
AT2G29790.1
maternally expressed family protein
arTal_v1_Chr3_+_17527507_17527507 0.32 AT3G47570.1
Leucine-rich repeat protein kinase family protein
arTal_v1_Chr2_-_15641773_15641773 0.32 AT2G37240.1
Thioredoxin superfamily protein
arTal_v1_Chr5_+_16529455_16529455 0.31 AT5G41315.1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr1_+_7911843_7911843 0.31 AT1G22410.1
Class-II DAHP synthetase family protein
arTal_v1_Chr5_-_26898016_26898016 0.31 AT5G67410.1
transcriptional regulator of RNA polII, SAGA, subunit
arTal_v1_Chr3_-_1970784_1970784 0.31 AT3G06435.1
Expressed protein
arTal_v1_Chr5_-_277886_277886 0.31 AT5G01730.1
AT5G01730.2
AT5G01730.7
SCAR family protein 4
arTal_v1_Chr5_-_26343546_26343546 0.31 AT5G65830.1
receptor like protein 57
arTal_v1_Chr5_-_26341789_26341789 0.30 AT5G65820.1
Pentatricopeptide repeat (PPR) superfamily protein
arTal_v1_Chr1_-_28448646_28448735 0.30 AT1G75760.3
AT1G75760.1
AT1G75760.2
ER lumen protein retaining receptor family protein
arTal_v1_Chr1_+_7554671_7554840 0.30 AT1G21560.2
AT1G21560.3
AT1G21560.6
AT1G21560.4
AT1G21560.5
AT1G21560.1
hypothetical protein
arTal_v1_Chr5_+_16395507_16395507 0.30 AT5G40910.9
Disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr3_+_19371135_19371135 0.29 AT3G52230.1
hypothetical protein
arTal_v1_Chr5_+_20317405_20317405 0.29 AT5G49945.1
hypothetical protein (DUF1682)
arTal_v1_Chr2_-_5656518_5656518 0.29 AT2G13570.1
nuclear factor Y, subunit B7
arTal_v1_Chr5_-_24096532_24096532 0.29 AT5G59800.1
methyl-CPG-binding domain 7
arTal_v1_Chr5_-_26424653_26424653 0.29 AT5G66080.2
Protein phosphatase 2C family protein
arTal_v1_Chr3_+_9120859_9120859 0.29 AT3G25030.3
RING/U-box superfamily protein
arTal_v1_Chr4_-_13690478_13690538 0.29 AT4G27340.2
AT4G27340.3
AT4G27340.1
Met-10+ like family protein
arTal_v1_Chr1_-_3637250_3637250 0.29 AT1G10900.3
AT1G10900.2
AT1G10900.1
Phosphatidylinositol-4-phosphate 5-kinase family protein
arTal_v1_Chr5_-_26897679_26897679 0.29 AT5G67410.2
transcriptional regulator of RNA polII, SAGA, subunit
arTal_v1_Chr4_+_1321758_1321843 0.29 AT4G02990.1
AT4G02990.2
Mitochondrial transcription termination factor family protein
arTal_v1_Chr1_+_28423896_28423896 0.28 AT1G75700.1
HVA22-like protein G
arTal_v1_Chr1_+_28423495_28423598 0.28 AT1G75700.2
AT1G75700.3
HVA22-like protein G
arTal_v1_Chr1_-_11909049_11909049 0.28 AT1G32860.1
Glycosyl hydrolase superfamily protein
arTal_v1_Chr2_-_7821379_7821387 0.28 AT2G17970.10
AT2G17970.6
AT2G17970.7
AT2G17970.5
AT2G17970.8
AT2G17970.4
AT2G17970.1
AT2G17970.9
AT2G17970.2
AT2G17970.3
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
arTal_v1_Chr1_+_4391671_4391671 0.28 AT1G12890.1
Integrase-type DNA-binding superfamily protein
arTal_v1_Chr3_-_8936279_8936298 0.28 AT3G24515.1
AT3G24515.2
AT3G24515.4
AT3G24515.3
ubiquitin-conjugating enzyme 37
arTal_v1_Chr1_-_88409_88409 0.27 AT1G01200.1
RAB GTPase homolog A3
arTal_v1_Chr3_+_19474945_19474945 0.27 AT3G52525.1
ovate family protein 6
arTal_v1_Chr5_+_24003888_24003888 0.27 AT5G59570.1
AT5G59570.2
Homeodomain-like superfamily protein
arTal_v1_Chr3_+_18998182_18998182 0.27 AT3G51140.2
DnaJ (DUF3353)
arTal_v1_Chr5_+_16395162_16395162 0.27 AT5G40910.8
Disease resistance protein (TIR-NBS-LRR class) family
arTal_v1_Chr3_+_10076809_10076819 0.27 AT3G27280.1
AT3G27280.2
prohibitin 4
arTal_v1_Chr5_+_5229513_5229513 0.27 AT5G16020.1
gamete-expressed 3
arTal_v1_Chr5_+_16529090_16529090 0.27 AT5G41315.2
AT5G41315.3
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
arTal_v1_Chr4_+_12972685_12972685 0.26 AT4G25370.1
Double Clp-N motif protein
arTal_v1_Chr1_-_6418690_6418693 0.26 AT1G18640.3
AT1G18640.2
3-phosphoserine phosphatase
arTal_v1_Chr5_+_17857325_17857325 0.26 AT5G44330.1
Tetratricopeptide repeat (TPR)-like superfamily protein
arTal_v1_Chr4_+_17695496_17695496 0.26 AT4G37660.1
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
arTal_v1_Chr4_+_8475101_8475221 0.26 AT4G14760.3
AT4G14760.1
kinase interacting (KIP1-like) family protein
arTal_v1_Chr4_-_3762441_3762441 0.26 AT4G06632.1

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G41315

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 9.7 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.3 1.7 GO:0071277 cellular response to calcium ion(GO:0071277)
0.3 1.3 GO:0010480 microsporocyte differentiation(GO:0010480)
0.3 1.6 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.2 0.7 GO:0035444 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
0.2 1.2 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.2 0.8 GO:1990428 miRNA transport(GO:1990428)
0.2 1.1 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.2 0.5 GO:0051447 negative regulation of meiotic nuclear division(GO:0045835) negative regulation of meiotic cell cycle(GO:0051447)
0.2 1.2 GO:0051127 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.2 0.6 GO:0000023 maltose metabolic process(GO:0000023)
0.1 2.9 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.1 0.9 GO:0097502 mannosylation(GO:0097502)
0.1 2.0 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 0.5 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 1.1 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.1 0.3 GO:0015786 UDP-glucose transport(GO:0015786)
0.1 0.8 GO:0042350 GDP-L-fucose biosynthetic process(GO:0042350) GDP-L-fucose metabolic process(GO:0046368)
0.1 0.5 GO:0019419 sulfate reduction(GO:0019419)
0.1 0.7 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.1 0.3 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.1 0.6 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.1 0.4 GO:0030856 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.1 0.9 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 0.9 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 0.4 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.1 1.2 GO:0032365 intracellular lipid transport(GO:0032365)
0.1 0.4 GO:0042549 photosystem II stabilization(GO:0042549)
0.1 0.4 GO:0043100 pyrimidine nucleobase salvage(GO:0043100)
0.1 0.4 GO:0009120 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.1 0.6 GO:0031542 positive regulation of anthocyanin biosynthetic process(GO:0031542)
0.1 0.2 GO:0000492 box C/D snoRNP assembly(GO:0000492)
0.1 0.4 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.1 1.4 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 0.3 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 0.7 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.1 1.0 GO:1900865 chloroplast RNA modification(GO:1900865)
0.1 0.8 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
0.0 1.8 GO:0042335 cuticle development(GO:0042335)
0.0 0.6 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.5 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.3 GO:0009303 rRNA transcription(GO:0009303)
0.0 0.2 GO:0034389 lipid particle organization(GO:0034389)
0.0 0.5 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.2 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.2 GO:1901465 positive regulation of tetrapyrrole biosynthetic process(GO:1901465)
0.0 0.5 GO:0032409 regulation of transporter activity(GO:0032409)
0.0 0.2 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.0 0.5 GO:0010207 photosystem II assembly(GO:0010207)
0.0 1.9 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.3 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 1.2 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.5 GO:0009750 response to fructose(GO:0009750)
0.0 0.1 GO:0019499 cyanide metabolic process(GO:0019499)
0.0 0.2 GO:0046451 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 1.2 GO:0008037 cell recognition(GO:0008037) recognition of pollen(GO:0048544)
0.0 0.3 GO:0006378 mRNA polyadenylation(GO:0006378)
0.0 0.2 GO:0030308 positive regulation of mitochondrion organization(GO:0010822) negative regulation of cell growth(GO:0030308)
0.0 0.1 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.0 1.0 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.3 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 1.4 GO:0080167 response to karrikin(GO:0080167)
0.0 0.2 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.2 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.0 0.1 GO:0010444 G1/S transition of mitotic cell cycle(GO:0000082) guard mother cell cytokinesis(GO:0010235) guard mother cell differentiation(GO:0010444) meiotic cytokinesis(GO:0033206)
0.0 0.6 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.7 GO:0006612 protein targeting to membrane(GO:0006612)
0.0 0.1 GO:0016120 carotene biosynthetic process(GO:0016120)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 10.2 GO:0010319 stromule(GO:0010319)
0.2 1.0 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.2 1.6 GO:0009538 photosystem I reaction center(GO:0009538)
0.2 2.9 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.2 1.2 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.2 0.5 GO:0035371 microtubule plus-end(GO:0035371)
0.1 0.6 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.1 0.9 GO:0031209 SCAR complex(GO:0031209)
0.0 0.6 GO:0000124 SAGA complex(GO:0000124)
0.0 2.0 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.0 0.4 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.0 0.2 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.2 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.7 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.3 GO:0010369 chromocenter(GO:0010369)
0.0 0.1 GO:0042721 mitochondrial inner membrane protein insertion complex(GO:0042721)
0.0 0.4 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.4 GO:0000776 kinetochore(GO:0000776)
0.0 4.7 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.3 GO:0005801 cis-Golgi network(GO:0005801)
0.0 2.6 GO:0042170 plastid membrane(GO:0042170)
0.0 8.1 GO:0009532 plastid stroma(GO:0009532)
0.0 0.2 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.3 GO:0035838 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 5.8 GO:0009579 thylakoid(GO:0009579)
0.0 0.2 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 1.9 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.4 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.3 1.3 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.3 9.7 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.3 0.8 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.2 0.7 GO:0015087 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.2 1.2 GO:0004072 aspartate kinase activity(GO:0004072)
0.2 0.6 GO:0004359 glutaminase activity(GO:0004359)
0.2 0.6 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134) heteropolysaccharide binding(GO:0010297)
0.2 0.6 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.2 1.6 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.2 1.2 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.2 0.5 GO:0051010 microtubule plus-end binding(GO:0051010)
0.2 1.1 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.2 1.7 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.1 0.4 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.1 0.5 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.1 0.4 GO:0010242 oxygen evolving activity(GO:0010242)
0.1 1.3 GO:0016161 beta-amylase activity(GO:0016161)
0.1 0.3 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.1 0.2 GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives(GO:0016855) racemase activity, acting on amino acids and derivatives(GO:0036361) amino-acid racemase activity(GO:0047661)
0.1 0.4 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.1 1.8 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 0.6 GO:0046923 ER retention sequence binding(GO:0046923)
0.1 0.8 GO:0070568 guanylyltransferase activity(GO:0070568)
0.1 0.3 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.1 0.3 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.1 1.6 GO:0008810 cellulase activity(GO:0008810)
0.1 1.5 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 0.3 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 0.2 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.1 0.6 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.2 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.0 1.0 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 0.4 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.3 GO:0004096 catalase activity(GO:0004096)
0.0 0.5 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 2.0 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.2 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.0 0.2 GO:0005536 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.0 0.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.3 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.2 GO:0043495 protein anchor(GO:0043495)
0.0 0.4 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 1.5 GO:0043621 protein self-association(GO:0043621)
0.0 0.8 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 0.1 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.0 0.3 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.2 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 0.8 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.9 GO:0019843 rRNA binding(GO:0019843)
0.0 0.0 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.0 0.2 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.6 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.3 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.3 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 1.0 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.4 GO:0015205 nucleobase transmembrane transporter activity(GO:0015205)
0.0 2.9 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.6 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.2 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.0 0.5 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.1 GO:0016859 cis-trans isomerase activity(GO:0016859)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 9.7 PID CMYB PATHWAY C-MYB transcription factor network
0.1 0.4 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.0 0.1 ST GRANULE CELL SURVIVAL PATHWAY Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.6 9.7 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.1 0.3 REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC Genes involved in Formation of tubulin folding intermediates by CCT/TriC