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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G08520

Z-value: 1.06

Transcription factors associated with AT5G08520

Gene Symbol Gene ID Gene Info
AT5G08520
AT5G08520 Duplicated homeodomain-like superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT5G08520arTal_v1_Chr5_-_2758540_27585400.019.6e-01Click!

Activity profile of AT5G08520 motif

Sorted Z-values of AT5G08520 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_-_17907638 3.89 AT5G44420.1
PDF1.2
plant defensin 1.2
Chr4_+_13391293 3.05 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
Chr4_+_13390754 2.76 AT4G26530.3
FBA5
Aldolase superfamily protein
Chr2_-_1800472 2.73 AT2G05070.1
LHCB2.2
photosystem II light harvesting complex protein 2.2
Chr1_+_6927736 2.53 AT1G19960.1
AT1G19960
transcription factor
Chr1_-_10473502 2.48 AT1G29910.1
CAB3
chlorophyll A/B binding protein 3
Chr2_-_6493512 2.31 AT2G15020.1
AT2G15020
hypothetical protein
Chr1_-_4090857 2.27 AT1G12090.1
ELP
extensin-like protein
Chr5_-_15382071 2.26 AT5G38420.1
RBCS2B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr5_-_15378416 2.25 AT5G38410.3
AT5G38410.2
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr1_+_11532199 2.24 AT1G32060.1
PRK
phosphoribulokinase
Chr5_-_15378642 2.23 AT5G38410.1
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr5_+_4757856 2.21 AT5G14740.3
AT5G14740.6
AT5G14740.1
AT5G14740.7
AT5G14740.8
AT5G14740.2
AT5G14740.4
AT5G14740.5
CA2
carbonic anhydrase 2
Chr2_+_16476198 2.20 AT2G39470.1
AT2G39470.2
AT2G39470.3
PnsL1
PsbP-like protein 2
Chr2_+_11087280 2.16 AT2G26010.1
PDF1.3
plant defensin 1.3
Chr4_+_6408007 2.14 AT4G10340.1
LHCB5
light harvesting complex of photosystem II 5
Chr5_-_20204595 2.08 AT5G49730.1
AT5G49730.2
FRO6
ferric reduction oxidase 6
Chr1_-_7531108 2.06 AT1G21500.1
AT1G21500
hypothetical protein
Chr3_+_2717557 1.99 AT3G08940.2
AT3G08940.1
LHCB4.2
light harvesting complex photosystem II
Chr1_-_26726652 1.93 AT1G70890.1
MLP43
MLP-like protein 43
Chr1_+_3008910 1.81 AT1G09310.1
AT1G09310
plant/protein (Protein of unknown function, DUF538)
Chr1_+_7949476 1.79 AT1G22500.1
ATL15
RING/U-box superfamily protein
Chr5_+_6457026 1.79 AT5G19190.1
AT5G19190
hypothetical protein
Chr3_-_197974 1.78 AT3G01500.1
CA1
carbonic anhydrase 1
Chr1_-_28245453 1.73 AT1G75250.1
AT1G75250.2
RL6
RAD-like 6
Chr3_-_198160 1.72 AT3G01500.2
CA1
carbonic anhydrase 1
Chr5_+_16711042 1.72 AT5G41761.1
AT5G41761
hypothetical protein
Chr5_+_426226 1.71 AT5G02160.1
AT5G02160
transmembrane protein
Chr1_-_24062804 1.70 AT1G64780.1
AMT1%3B2
ammonium transporter 1;2
Chr3_-_17337733 1.70 AT3G47070.1
AT3G47070
thylakoid soluble phosphoprotein
Chr5_+_4758921 1.70 AT5G14740.9
CA2
carbonic anhydrase 2
Chr2_+_6518749 1.70 AT2G15050.3
AT2G15050.1
AT2G15050.2
LTP
lipid transfer protein
Chr3_-_198664 1.69 AT3G01500.3
CA1
carbonic anhydrase 1
Chr4_-_17777445 1.67 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
Chr5_+_8365601 1.65 AT5G24490.1
AT5G24490
30S ribosomal protein
Chr4_-_7857933 1.64 AT4G13500.1
AT4G13500
transmembrane protein
Chr4_+_12609373 1.63 AT4G24350.2
AT4G24350.4
AT4G24350.3
AT4G24350.1
AT4G24350
Phosphorylase superfamily protein
Chr1_+_4001113 1.61 AT1G11860.3
AT1G11860.1
AT1G11860.2
AT1G11860
Glycine cleavage T-protein family
Chr3_-_197564 1.61 AT3G01500.4
CA1
carbonic anhydrase 1
Chr1_-_27171410 1.60 AT1G72200.1
AT1G72200
RING/U-box superfamily protein
Chr1_-_6487153 1.59 AT1G18810.1
AT1G18810
phytochrome kinase substrate-like protein
Chr1_-_7043392 1.59 AT1G20340.1
DRT112
Cupredoxin superfamily protein
Chr1_-_25049424 1.58 AT1G67090.2
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
Chr1_-_25049667 1.58 AT1G67090.1
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
Chr5_-_25629615 1.58 AT5G64040.2
AT5G64040.1
PSAN
photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
Chr1_-_28423520 1.56 AT1G75690.1
LQY1
DnaJ/Hsp40 cysteine-rich domain superfamily protein
Chr4_+_17243583 1.55 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
Chr5_-_22186633 1.55 AT5G54610.1
ANK
ankyrin
Chr2_+_2026162 1.54 AT2G05520.4
AT2G05520.5
AT2G05520.6
AT2G05520.3
GRP-3
glycine-rich protein 3
Chr3_+_11527756 1.54 AT3G29670.1
PMAT2
HXXXD-type acyl-transferase family protein
Chr5_+_26573964 1.53 AT5G66590.1
AT5G66590
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr3_-_9492655 1.53 AT3G25920.1
RPL15
ribosomal protein L15
Chr1_+_898480 1.52 AT1G03600.1
PSB27
photosystem II family protein
Chr4_-_2673243 1.52 AT4G05180.1
AT4G05180.2
PSBQ-2
photosystem II subunit Q-2
Chr2_-_12277417 1.52 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
Chr3_-_7377186 1.52 AT3G21055.1
AT3G21055.2
PSBTN
photosystem II subunit T
Chr2_+_2025991 1.51 AT2G05520.2
AT2G05520.1
GRP-3
glycine-rich protein 3
Chr1_+_24057297 1.51 AT1G64770.1
AT1G64770.2
PnsB2
NDH-dependent cyclic electron flow 1
Chr2_-_2588448 1.51 AT2G06520.1
PSBX
photosystem II subunit X
Chr1_+_22700073 1.50 AT1G61520.2
LHCA3
PSI type III chlorophyll a/b-binding protein
Chr1_+_22699893 1.50 AT1G61520.1
LHCA3
PSI type III chlorophyll a/b-binding protein
Chr1_+_22699715 1.50 AT1G61520.3
LHCA3
PSI type III chlorophyll a/b-binding protein
Chr3_-_4744263 1.48 AT3G14240.1
AT3G14240
Subtilase family protein
Chr5_+_15703078 1.48 AT5G39210.1
CRR7
chlororespiratory reduction 7
Chr4_+_18296388 1.45 AT4G39350.1
CESA2
cellulose synthase A2
Chr2_-_12277245 1.45 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
Chr1_+_6450585 1.45 AT1G18710.1
MYB47
myb domain protein 47
Chr1_-_29518028 1.44 AT1G78450.1
AT1G78450
SOUL heme-binding family protein
Chr3_-_1832190 1.44 AT3G06070.1
AT3G06070
hypothetical protein
Chr2_+_1076863 1.44 AT2G03550.1
AT2G03550
alpha/beta-Hydrolases superfamily protein
Chr4_+_7521257 1.43 AT4G12800.2
AT4G12800.1
PSAL
photosystem I subunit l
Chr5_-_7419335 1.43 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
Chr1_+_24229063 1.42 AT1G65230.1
AT1G65230
transmembrane protein, putative (DUF2358)
Chr3_-_5271984 1.41 AT3G15570.1
AT3G15570
Phototropic-responsive NPH3 family protein
Chr1_+_26705420 1.40 AT1G70820.1
AT1G70820.2
AT1G70820
phosphoglucomutase, putative / glucose phosphomutase
Chr5_+_6006035 1.40 AT5G18170.1
GDH1
glutamate dehydrogenase 1
Chr4_-_7591259 1.40 AT4G12980.1
AT4G12980
Auxin-responsive family protein
Chr4_-_13398307 1.40 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
Chr1_+_24057063 1.39 AT1G64770.3
PnsB2
NDH-dependent cyclic electron flow 1
Chr2_-_1149261 1.37 AT2G03750.1
AT2G03750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_-_10329941 1.35 AT2G24270.3
AT2G24270.4
AT2G24270.2
AT2G24270.1
ALDH11A3
aldehyde dehydrogenase 11A3
Chr4_-_11648644 1.34 AT4G21960.1
PRXR1
Peroxidase superfamily protein
Chr1_+_3015237 1.34 AT1G09340.2
AT1G09340.1
CRB
chloroplast RNA binding protein
Chr2_+_10667898 1.33 AT2G25080.1
GPX1
glutathione peroxidase 1
Chr1_-_19454697 1.33 AT1G52220.3
AT1G52220.2
AT1G52220.4
AT1G52220.1
AT1G52220
CURVATURE THYLAKOID protein
Chr5_+_18697235 1.32 AT5G46110.2
AT5G46110.1
AT5G46110.3
AT5G46110.4
APE2
Glucose-6-phosphate/phosphate translocator-like protein
Chr1_+_27991165 1.31 AT1G74470.1
AT1G74470
Pyridine nucleotide-disulfide oxidoreductase family protein
Chr4_+_8360996 1.31 AT4G14560.1
IAA1
indole-3-acetic acid inducible
Chr5_+_7703041 1.31 AT5G23010.2
AT5G23010.1
AT5G23010.3
MAM1
methylthioalkylmalate synthase 1
Chr1_+_28335502 1.29 AT1G75490.1
AT1G75490
Integrase-type DNA-binding superfamily protein
Chr1_-_19052582 1.28 AT1G51400.1
AT1G51400
Photosystem II 5 kD protein
Chr2_+_11041331 1.27 AT2G25900.2
AT2G25900.1
ATCTH
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr5_-_20940895 1.27 AT5G51550.1
EXL3
EXORDIUM like 3
Chr1_+_6942625 1.27 AT1G20020.1
AT1G20020.2
AT1G20020.3
FNR2
ferredoxin-NADP[+]-oxidoreductase 2
Chr5_+_22175461 1.26 AT5G54585.1
AT5G54585
hypothetical protein
Chr4_-_13022996 1.26 AT4G25490.1
CBF1
C-repeat/DRE binding factor 1
Chr1_+_16871696 1.26 AT1G44575.2
NPQ4
Chlorophyll A-B binding family protein
Chr4_+_11424666 1.26 AT4G21445.1
AT4G21445
receptor-interacting protein
Chr1_+_16871511 1.26 AT1G44575.3
NPQ4
Chlorophyll A-B binding family protein
Chr3_+_188321 1.26 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
Chr2_+_1679307 1.25 AT2G04790.10
AT2G04790.6
AT2G04790.5
AT2G04790.7
AT2G04790.9
AT2G04790.8
AT2G04790.13
AT2G04790.12
AT2G04790.11
AT2G04790.14
AT2G04790.15
AT2G04790.16
AT2G04790.4
AT2G04790.3
AT2G04790.1
AT2G04790.2
AT2G04790
PTB domain engulfment adapter
Chr4_-_1230164 1.25 AT4G02770.1
PSAD-1
photosystem I subunit D-1
Chr1_+_5608682 1.25 AT1G16410.1
AT1G16410.2
CYP79F1
cytochrome p450 79f1
Chr2_+_9636346 1.24 AT2G22670.1
AT2G22670.4
AT2G22670.2
AT2G22670.5
AT2G22670.3
IAA8
indoleacetic acid-induced protein 8
Chr1_-_19472582 1.24 AT1G52290.2
AT1G52290.1
PERK15
Protein kinase superfamily protein
Chr1_+_16870221 1.23 AT1G44575.1
NPQ4
Chlorophyll A-B binding family protein
Chr3_-_7557969 1.23 AT3G21460.1
AT3G21460
Glutaredoxin family protein
Chr4_+_13388290 1.22 AT4G26520.2
AT4G26520.1
AT4G26520.3
FBA7
Aldolase superfamily protein
Chr4_-_16536224 1.21 AT4G34620.1
SSR16
small subunit ribosomal protein 16
Chr4_-_545566 1.21 AT4G01310.1
AT4G01310
Ribosomal L5P family protein
Chr1_-_29352946 1.21 AT1G78060.1
AT1G78060
Glycosyl hydrolase family protein
Chr4_-_10188981 1.21 AT4G18440.1
AT4G18440
L-Aspartase-like family protein
Chr4_+_2076832 1.20 AT4G04293.1
AT4G04293

Chr1_-_74731 1.20 AT1G01170.2
AT1G01170.1
AT1G01170
ozone-responsive stress-like protein (DUF1138)
Chr2_+_17894796 1.20 AT2G43030.1
AT2G43030
Ribosomal protein L3 family protein
Chr2_+_12597018 1.19 AT2G29340.2
AT2G29340.1
AT2G29340.3
AT2G29340.4
AT2G29340
NAD-dependent epimerase/dehydratase family protein
Chr2_-_10737800 1.19 AT2G25200.1
AT2G25200
hypothetical protein (DUF868)
Chr5_+_208866 1.19 AT5G01530.1
LHCB4.1
light harvesting complex photosystem II
Chr3_-_20475332 1.18 AT3G55240.1
AT3G55240
Plant protein 1589 of unknown function
Chr1_+_25374072 1.18 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
Chr3_+_16525245 1.17 AT3G45140.1
AT3G45140.2
LOX2
lipoxygenase 2
Chr1_+_557092 1.17 AT1G02620.1
AT1G02620
Ras-related small GTP-binding family protein
Chr5_+_15641442 1.17 AT5G39080.1
AT5G39080
HXXXD-type acyl-transferase family protein
Chr3_+_256295 1.14 AT3G01690.1
AT3G01690
alpha/beta-Hydrolases superfamily protein
Chr5_-_5367612 1.13 AT5G16410.1
AT5G16410
HXXXD-type acyl-transferase family protein
Chr1_-_29011247 1.13 AT1G77210.3
AT1G77210.2
STP14
sugar transporter 14
Chr3_-_5175523 1.12 AT3G15356.1
AT3G15356
Legume lectin family protein
Chr4_-_2352025 1.11 AT4G04640.1
ATPC1
ATPase, F1 complex, gamma subunit protein
Chr3_+_17993999 1.11 AT3G48550.2
AT3G48550
SHOOT GRAVITROPISM-like protein
Chr3_-_5254458 1.11 AT3G15530.2
AT3G15530.1
AT3G15530
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_17893067 1.11 AT5G44410.1
AT5G44410
FAD-binding Berberine family protein
Chr1_-_6308010 1.10 AT1G18330.2
EPR1
Homeodomain-like superfamily protein
Chr3_+_3130072 1.10 AT3G10120.1
AT3G10120
hypothetical protein
Chr5_-_13959830 1.10 AT5G35790.1
G6PD1
glucose-6-phosphate dehydrogenase 1
Chr5_-_18026077 1.09 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr1_-_6308243 1.09 AT1G18330.1
EPR1
Homeodomain-like superfamily protein
Chr1_-_4921535 1.09 AT1G14380.3
AT1G14380.4
AT1G14380.2
AT1G14380.5
AT1G14380.6
AT1G14380.7
AT1G14380.1
IQD28
IQ-domain 28
Chr2_-_18778374 1.09 AT2G45560.3
AT2G45560.2
CYP76C1
cytochrome P450, family 76, subfamily C, polypeptide 1
Chr2_+_15106940 1.08 AT2G35960.1
NHL12
NDR1/HIN1-like 12
Chr1_+_19806263 1.08 AT1G53160.1
AT1G53160.2
AT1G53160.3
SPL4
squamosa promoter binding protein-like 4
Chr1_+_17123785 1.08 AT1G45201.3
AT1G45201.1
AT1G45201.2
TLL1
triacylglycerol lipase-like 1
Chr5_-_7410102 1.08 AT5G22380.1
NAC090
NAC domain containing protein 90
Chr4_+_14192569 1.07 AT4G28720.1
YUC8
Flavin-binding monooxygenase family protein
Chr1_+_8168443 1.07 AT1G23050.1
AT1G23050
hydroxyproline-rich glycoprotein family protein
Chr3_+_9406669 1.07 AT3G25770.1
AOC2
allene oxide cyclase 2
Chr1_+_29735952 1.06 AT1G79040.1
PSBR
photosystem II subunit R
Chr5_+_13689817 1.06 AT5G35490.1
MRU1
mto 1 responding up 1
Chr2_+_13518199 1.06 AT2G31790.1
AT2G31790
UDP-Glycosyltransferase superfamily protein
Chr2_-_15273115 1.06 AT2G36400.1
GRF3
growth-regulating factor 3
Chr3_+_21982989 1.06 AT3G59480.1
AT3G59480
pfkB-like carbohydrate kinase family protein
Chr1_-_1552587 1.05 AT1G05310.1
AT1G05310
Pectin lyase-like superfamily protein
Chr5_-_23849107 1.05 AT5G59080.1
AT5G59080.2
AT5G59080
hypothetical protein
Chr2_-_18778676 1.05 AT2G45560.1
CYP76C1
cytochrome P450, family 76, subfamily C, polypeptide 1
Chr2_+_9786316 1.04 AT2G22990.5
AT2G22990.4
AT2G22990.3
AT2G22990.2
SNG1
sinapoylglucose 1
Chr1_+_6460598 1.04 AT1G18730.3
AT1G18730.2
AT1G18730.4
PnsB4
NDH dependent flow 6
Chr3_-_589693 1.03 AT3G02730.1
TRXF1
thioredoxin F-type 1
Chr1_-_29012096 1.02 AT1G77210.1
STP14
sugar transporter 14
Chr1_+_28327698 1.02 AT1G75460.1
AT1G75460
ATP-dependent protease La (LON) domain protein
Chr3_+_17987378 1.02 AT3G48530.1
KING1
SNF1-related protein kinase regulatory subunit gamma 1
Chr3_+_10017321 1.02 AT3G27160.1
AT3G27160.2
GHS1
Ribosomal protein S21 family protein
Chr3_-_16558169 1.02 AT3G45210.1
AT3G45210
transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
Chr4_-_7893727 1.01 AT4G13575.1
AT4G13575.2
AT4G13575
hypothetical protein
Chr2_+_12542933 1.01 AT2G29180.1
AT2G29180
transmembrane protein
Chr2_+_9786087 1.01 AT2G22990.6
AT2G22990.1
SNG1
sinapoylglucose 1
Chr3_+_17993819 1.01 AT3G48550.1
AT3G48550
SHOOT GRAVITROPISM-like protein
Chr4_+_10651744 1.01 AT4G19530.1
AT4G19530.2
AT4G19530
disease resistance protein (TIR-NBS-LRR class) family
Chr3_+_16945433 1.00 AT3G46130.3
AT3G46130.4
MYB48
myb domain protein 48
Chr3_+_16945230 1.00 AT3G46130.2
AT3G46130.1
MYB48
myb domain protein 48
Chr1_-_22096620 1.00 AT1G60010.1
AT1G60010
D-ribose-binding periplasmic protein
Chr3_+_19342014 1.00 AT3G52150.1
AT3G52150.2
PSRP2
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr5_-_21391561 1.00 AT5G52780.1
AT5G52780
transmembrane protein, putative (DUF3464)
Chr4_-_7312684 1.00 AT4G12310.1
CYP706A5
cytochrome P450, family 706, subfamily A, polypeptide 5
Chr2_-_18630779 1.00 AT2G45190.1
AFO
Plant-specific transcription factor YABBY family protein
Chr2_-_12415661 0.99 AT2G28900.1
OEP16-1
outer plastid envelope protein 16-1
Chr5_+_21170048 0.99 AT5G52100.1
CRR1
Dihydrodipicolinate reductase, bacterial/plant
Chr5_+_26568572 0.99 AT5G66570.1
PSBO1
PS II oxygen-evolving complex 1
Chr1_-_12688543 0.99 AT1G34640.1
AT1G34640
peptidase
Chr2_-_18630428 0.99 AT2G45190.2
AFO
Plant-specific transcription factor YABBY family protein
Chr5_+_10477771 0.99 AT5G28500.2
AT5G28500
rubisco accumulation factor-like protein
Chr5_+_5907775 0.99 AT5G17870.1
PSRP6
plastid-specific 50S ribosomal protein 6
Chr1_-_28557615 0.98 AT1G76110.1
AT1G76110
HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein
Chr5_+_10477556 0.98 AT5G28500.1
AT5G28500
rubisco accumulation factor-like protein
Chr2_-_14310608 0.98 AT2G33830.2
AT2G33830
Dormancy/auxin associated family protein
Chr2_-_18873972 0.98 AT2G45850.3
AT2G45850.1
AT2G45850
AT hook motif DNA-binding family protein
Chr3_+_8152038 0.98 AT3G22970.2
AT3G22970.1
AT3G22970
hypothetical protein (DUF506)
Chr4_-_9497313 0.97 AT4G16880.1
AT4G16880
Leucine-rich repeat (LRR) family protein
Chr2_-_14310339 0.97 AT2G33830.1
AT2G33830
Dormancy/auxin associated family protein
Chr2_+_16927501 0.97 AT2G40530.1
AT2G40530
transmembrane protein
Chr5_+_5907589 0.97 AT5G17870.2
PSRP6
plastid-specific 50S ribosomal protein 6
Chr2_+_15980848 0.97 AT2G38140.1
PSRP4
plastid-specific ribosomal protein 4
Chr2_-_15636522 0.96 AT2G37220.1
AT2G37220
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr4_+_13388719 0.96 AT4G26520.4
FBA7
Aldolase superfamily protein
Chr2_+_19472573 0.96 AT2G47450.1
CAO
chloroplast signal recognition particle component (CAO)
Chr2_+_19191247 0.96 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr1_+_21043348 0.96 AT1G56220.2
AT1G56220.1
AT1G56220
Dormancy/auxin associated family protein
Chr1_+_21042951 0.96 AT1G56220.4
AT1G56220.5
AT1G56220.3
AT1G56220
Dormancy/auxin associated family protein
Chr1_-_8983314 0.95 AT1G25560.1
TEM1
AP2/B3 transcription factor family protein
Chr3_-_8181853 0.95 AT3G23030.1
IAA2
indole-3-acetic acid inducible 2
Chr4_-_12886695 0.95 AT4G25100.1
AT4G25100.3
AT4G25100.4
FSD1
Fe superoxide dismutase 1
Chr5_-_6591305 0.95 AT5G19530.1
AT5G19530.2
ACL5
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G08520

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 10.7 GO:0015976 carbon utilization(GO:0015976)
0.6 15.3 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.6 1.7 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.5 1.5 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.5 8.7 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.4 1.3 GO:0035436 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.4 1.7 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.4 3.8 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.4 1.2 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.4 2.0 GO:0010450 inflorescence meristem growth(GO:0010450)
0.4 1.2 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.4 1.9 GO:0006106 fumarate metabolic process(GO:0006106)
0.4 7.1 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.4 1.4 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.4 1.1 GO:0009233 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
0.3 1.0 GO:1990532 stress response to nickel ion(GO:1990532)
0.3 1.3 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.3 3.9 GO:0032544 plastid translation(GO:0032544)
0.3 5.5 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.3 3.3 GO:0010206 photosystem II repair(GO:0010206)
0.3 3.3 GO:1901959 positive regulation of cutin biosynthetic process(GO:1901959)
0.3 0.9 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.3 1.7 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.3 0.8 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.3 0.8 GO:2001294 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.3 0.8 GO:0010266 response to vitamin B1(GO:0010266)
0.3 0.8 GO:0015840 urea transport(GO:0015840)
0.3 0.8 GO:0000050 urea cycle(GO:0000050)
0.2 1.2 GO:0035627 ceramide transport(GO:0035627)
0.2 1.6 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.2 1.6 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.2 0.9 GO:0033306 phytol metabolic process(GO:0033306)
0.2 1.1 GO:0071323 cellular response to chitin(GO:0071323)
0.2 1.1 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.2 0.9 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.2 0.9 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.2 1.0 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.2 0.6 GO:0034982 mitochondrial protein processing(GO:0034982) cristae formation(GO:0042407)
0.2 3.6 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.2 1.0 GO:0042549 photosystem II stabilization(GO:0042549)
0.2 2.6 GO:0010044 response to aluminum ion(GO:0010044)
0.2 0.6 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.2 1.0 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.2 4.2 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.2 24.4 GO:0015979 photosynthesis(GO:0015979)
0.2 0.9 GO:0048442 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.2 0.6 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.2 0.9 GO:0005980 glycogen catabolic process(GO:0005980)
0.2 1.2 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.2 1.0 GO:0006565 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.2 0.7 GO:0009106 lipoate metabolic process(GO:0009106)
0.2 1.3 GO:0042362 fat-soluble vitamin metabolic process(GO:0006775) vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360) fat-soluble vitamin biosynthetic process(GO:0042362)
0.2 0.5 GO:0055068 nickel cation transmembrane transport(GO:0035444) cobalt ion homeostasis(GO:0055068)
0.2 0.3 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 0.5 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.2 0.9 GO:0043478 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.2 0.8 GO:0019742 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.1 0.6 GO:0010117 photoprotection(GO:0010117) response to paraquat(GO:1901562)
0.1 0.9 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 0.7 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.1 0.3 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.1 0.7 GO:0007142 male meiosis II(GO:0007142)
0.1 0.7 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 1.4 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 0.6 GO:0097468 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.1 1.1 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.4 GO:0031441 negative regulation of mRNA 3'-end processing(GO:0031441) negative regulation of mRNA processing(GO:0050686) negative regulation of mRNA polyadenylation(GO:1900364) negative regulation of mRNA metabolic process(GO:1903312)
0.1 1.6 GO:1902182 shoot apical meristem development(GO:1902182)
0.1 0.5 GO:0006788 heme oxidation(GO:0006788)
0.1 0.8 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.1 0.6 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.1 1.7 GO:0006465 signal peptide processing(GO:0006465)
0.1 0.1 GO:0071217 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217)
0.1 1.3 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 0.8 GO:0006591 ornithine metabolic process(GO:0006591)
0.1 0.5 GO:0006729 tetrahydrobiopterin biosynthetic process(GO:0006729) tetrahydrobiopterin metabolic process(GO:0046146)
0.1 0.7 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.1 1.4 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.1 0.5 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.1 1.7 GO:0055069 zinc ion homeostasis(GO:0055069)
0.1 1.7 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.1 1.8 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.1 1.7 GO:0006538 glutamate catabolic process(GO:0006538)
0.1 2.2 GO:0007602 phototransduction(GO:0007602) detection of light stimulus(GO:0009583) red, far-red light phototransduction(GO:0009585)
0.1 0.3 GO:0010451 regulation of floral meristem growth(GO:0010080) floral meristem growth(GO:0010451)
0.1 4.3 GO:0019761 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.1 0.6 GO:0046345 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.1 0.4 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.1 0.5 GO:0009245 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.1 0.4 GO:1990428 plastoquinone biosynthetic process(GO:0010236) miRNA transport(GO:1990428)
0.1 0.7 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 1.0 GO:1902025 nitrate import(GO:1902025)
0.1 0.5 GO:0006517 protein deglycosylation(GO:0006517)
0.1 0.5 GO:0006013 mannose metabolic process(GO:0006013)
0.1 0.5 GO:0043489 RNA stabilization(GO:0043489)
0.1 2.2 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 0.7 GO:0009645 response to low light intensity stimulus(GO:0009645)
0.1 0.3 GO:0046102 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.1 1.4 GO:0000373 Group II intron splicing(GO:0000373)
0.1 0.1 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.1 0.8 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.1 0.3 GO:2000001 regulation of DNA damage checkpoint(GO:2000001)
0.1 0.6 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.1 0.2 GO:0090342 regulation of cell aging(GO:0090342)
0.1 2.7 GO:0051667 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.1 1.0 GO:0010050 vegetative phase change(GO:0010050)
0.1 0.6 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 0.8 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.1 1.7 GO:0009638 phototropism(GO:0009638)
0.1 1.3 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.1 0.2 GO:0010394 homogalacturonan biosynthetic process(GO:0010289) homogalacturonan metabolic process(GO:0010394)
0.1 1.3 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.1 0.4 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 0.6 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.1 0.3 GO:0019388 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.1 0.4 GO:0010390 histone monoubiquitination(GO:0010390)
0.1 0.7 GO:0009799 specification of symmetry(GO:0009799)
0.1 0.3 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.1 0.5 GO:0006880 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.1 0.2 GO:0090549 response to carbon starvation(GO:0090549)
0.1 0.3 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.1 0.2 GO:0036292 DNA rewinding(GO:0036292) replication fork protection(GO:0048478)
0.1 1.1 GO:0055070 copper ion homeostasis(GO:0055070)
0.1 0.2 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.1 0.3 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.1 0.2 GO:0018196 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.1 1.0 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.1 1.3 GO:0043487 regulation of RNA stability(GO:0043487)
0.1 0.6 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 1.8 GO:0006284 base-excision repair(GO:0006284)
0.1 0.7 GO:0045995 regulation of embryonic development(GO:0045995)
0.1 1.0 GO:0009299 mRNA transcription(GO:0009299)
0.1 0.2 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 0.2 GO:0010288 response to lead ion(GO:0010288)
0.1 0.8 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.1 0.4 GO:0097034 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.1 0.5 GO:0046500 S-adenosylmethionine metabolic process(GO:0046500)
0.1 0.2 GO:0090143 nucleoid organization(GO:0090143)
0.1 0.3 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 0.9 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 1.8 GO:0010197 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.1 0.2 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 0.1 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.1 1.0 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.1 1.0 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 0.1 GO:0090224 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.0 0.5 GO:0009608 response to symbiont(GO:0009608)
0.0 0.4 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.0 0.4 GO:0015804 neutral amino acid transport(GO:0015804)
0.0 0.3 GO:0051095 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0 0.1 GO:0010185 regulation of cellular defense response(GO:0010185)
0.0 0.7 GO:0071450 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.0 0.3 GO:0045833 negative regulation of lipid metabolic process(GO:0045833)
0.0 0.4 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.0 0.5 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.0 0.3 GO:0080117 secondary growth(GO:0080117)
0.0 0.4 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 0.1 GO:0045604 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.0 1.1 GO:0019915 lipid storage(GO:0019915)
0.0 0.5 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 1.3 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.1 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.0 0.2 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.0 0.8 GO:0010152 pollen maturation(GO:0010152)
0.0 0.8 GO:0015986 ATP biosynthetic process(GO:0006754) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.0 0.2 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 0.3 GO:0009061 anaerobic respiration(GO:0009061)
0.0 0.2 GO:0019419 sulfate reduction(GO:0019419)
0.0 0.5 GO:0060261 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.0 0.8 GO:0009082 branched-chain amino acid biosynthetic process(GO:0009082)
0.0 0.4 GO:0043171 peptide catabolic process(GO:0043171)
0.0 0.1 GO:0000480 endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000472) endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000480)
0.0 4.3 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 0.2 GO:0009647 skotomorphogenesis(GO:0009647)
0.0 0.7 GO:0010229 inflorescence development(GO:0010229)
0.0 0.6 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.0 0.1 GO:0034367 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.0 0.4 GO:0033260 nuclear DNA replication(GO:0033260)
0.0 0.1 GO:0006425 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.0 0.1 GO:0071836 nectar secretion(GO:0071836)
0.0 1.0 GO:0016485 protein processing(GO:0016485)
0.0 0.6 GO:0009306 protein secretion(GO:0009306)
0.0 0.3 GO:1990937 xylan acetylation(GO:1990937)
0.0 0.2 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.4 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.1 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.0 0.1 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.1 GO:0043447 cellular alkane metabolic process(GO:0043446) alkane biosynthetic process(GO:0043447)
0.0 1.6 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.8 GO:0009644 response to high light intensity(GO:0009644)
0.0 0.1 GO:0010500 transmitting tissue development(GO:0010500)
0.0 0.6 GO:0006739 NADP metabolic process(GO:0006739)
0.0 0.2 GO:0006526 arginine biosynthetic process(GO:0006526)
0.0 0.1 GO:0006097 glyoxylate cycle(GO:0006097)
0.0 0.1 GO:0000492 box C/D snoRNP assembly(GO:0000492)
0.0 1.6 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.2 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.4 GO:0098586 virus induced gene silencing(GO:0009616) modulation by symbiont of RNA levels in host(GO:0052018) modulation of RNA levels in other organism involved in symbiotic interaction(GO:0052249) cellular response to virus(GO:0098586)
0.0 0.2 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 0.7 GO:0099518 vesicle transport along actin filament(GO:0030050) actin filament-based transport(GO:0099515) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.1 GO:0042891 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.0 0.6 GO:0050918 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.0 0.3 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.2 GO:0042177 negative regulation of protein catabolic process(GO:0042177)
0.0 11.0 GO:0006412 translation(GO:0006412)
0.0 0.1 GO:0007032 endosome organization(GO:0007032)
0.0 0.6 GO:0042026 protein refolding(GO:0042026)
0.0 0.4 GO:0031167 rRNA methylation(GO:0031167)
0.0 0.2 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.0 0.7 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.0 0.2 GO:0045739 positive regulation of DNA repair(GO:0045739)
0.0 0.3 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.8 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 0.2 GO:0080113 regulation of seed growth(GO:0080113)
0.0 0.1 GO:0036065 fucosylation(GO:0036065)
0.0 0.1 GO:0015739 sialic acid transport(GO:0015739)
0.0 0.1 GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation(GO:0006388)
0.0 1.0 GO:0010224 response to UV-B(GO:0010224)
0.0 0.0 GO:0031539 positive regulation of anthocyanin metabolic process(GO:0031539)
0.0 0.6 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.0 0.6 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.0 0.1 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.0 0.2 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.4 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.0 0.1 GO:0090114 COPII-coated vesicle budding(GO:0090114)
0.0 0.1 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 0.1 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.0 0.1 GO:0031507 heterochromatin assembly(GO:0031507)
0.0 0.3 GO:0006665 sphingolipid metabolic process(GO:0006665)
0.0 0.1 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.0 0.4 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.0 0.5 GO:0009825 multidimensional cell growth(GO:0009825)
0.0 0.1 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.0 0.1 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.2 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 0.4 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.2 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.0 0.4 GO:0030041 actin filament polymerization(GO:0030041)
0.0 0.1 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.1 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.2 GO:0005983 starch catabolic process(GO:0005983)
0.0 0.2 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.1 GO:0001510 RNA methylation(GO:0001510)
0.0 0.0 GO:0010358 leaf shaping(GO:0010358)
0.0 1.9 GO:0009451 RNA modification(GO:0009451)
0.0 0.1 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.9 GO:0000724 double-strand break repair via homologous recombination(GO:0000724)
0.0 0.2 GO:0015743 malate transport(GO:0015743)
0.0 0.3 GO:0006613 cotranslational protein targeting to membrane(GO:0006613) SRP-dependent cotranslational protein targeting to membrane(GO:0006614)
0.0 0.1 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 9.1 GO:0030076 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.5 1.6 GO:0030093 chloroplast photosystem I(GO:0030093)
0.4 7.0 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.3 14.2 GO:0010319 stromule(GO:0010319)
0.3 2.7 GO:0009538 photosystem I reaction center(GO:0009538)
0.3 2.6 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.3 8.1 GO:0009523 photosystem II(GO:0009523)
0.2 1.7 GO:0005787 signal peptidase complex(GO:0005787)
0.2 9.3 GO:0031977 thylakoid lumen(GO:0031977)
0.2 1.7 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.2 11.0 GO:0010287 plastoglobule(GO:0010287)
0.2 0.6 GO:0060293 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.2 0.8 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.2 0.7 GO:0030681 ribonuclease MRP complex(GO:0000172) nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.1 0.6 GO:0016461 unconventional myosin complex(GO:0016461)
0.1 38.4 GO:0009534 chloroplast thylakoid(GO:0009534)
0.1 8.4 GO:0009579 thylakoid(GO:0009579)
0.1 0.8 GO:1902555 tRNA-intron endonuclease complex(GO:0000214) endoribonuclease complex(GO:1902555)
0.1 0.5 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.1 0.3 GO:1990298 bub1-bub3 complex(GO:1990298)
0.1 0.4 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.1 0.6 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 0.4 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 1.1 GO:0009508 plastid chromosome(GO:0009508)
0.1 0.3 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.1 0.7 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 0.1 GO:0034719 SMN-Sm protein complex(GO:0034719)
0.1 3.7 GO:0009707 chloroplast outer membrane(GO:0009707)
0.1 1.5 GO:0045239 tricarboxylic acid cycle enzyme complex(GO:0045239)
0.1 0.9 GO:0009295 nucleoid(GO:0009295)
0.1 0.2 GO:0000811 GINS complex(GO:0000811)
0.1 1.0 GO:0009531 secondary cell wall(GO:0009531)
0.1 0.2 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.1 0.5 GO:0010168 ER body(GO:0010168)
0.1 1.0 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 0.7 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.1 0.4 GO:0009547 plastid ribosome(GO:0009547)
0.0 2.7 GO:0005811 lipid particle(GO:0005811)
0.0 0.3 GO:0000314 organellar small ribosomal subunit(GO:0000314)
0.0 0.5 GO:0005880 nuclear microtubule(GO:0005880)
0.0 0.1 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.0 7.8 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.2 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 2.0 GO:0005875 microtubule associated complex(GO:0005875)
0.0 0.6 GO:0055028 cortical microtubule(GO:0055028)
0.0 1.9 GO:0005840 ribosome(GO:0005840)
0.0 0.9 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.4 GO:0045298 tubulin complex(GO:0045298)
0.0 0.3 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.0 0.7 GO:0000313 organellar ribosome(GO:0000313)
0.0 0.1 GO:0030874 nucleolar chromatin(GO:0030874)
0.0 0.1 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.4 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.0 0.2 GO:0044545 NSL complex(GO:0044545)
0.0 0.1 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.0 0.3 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 1.0 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 1.0 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 2.7 GO:0015935 small ribosomal subunit(GO:0015935)
0.0 1.6 GO:0016607 nuclear speck(GO:0016607)
0.0 0.2 GO:0031969 chloroplast membrane(GO:0031969)
0.0 9.6 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.1 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.0 3.8 GO:0009941 chloroplast envelope(GO:0009941)
0.0 0.3 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 2.6 GO:0044391 ribosomal subunit(GO:0044391)
0.0 0.2 GO:0005815 microtubule organizing center(GO:0005815)
0.0 0.1 GO:0030127 COPII vesicle coat(GO:0030127)
0.0 0.1 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 0.1 GO:0070531 BRCA1-A complex(GO:0070531) BRISC complex(GO:0070552)
0.0 0.2 GO:0042555 MCM complex(GO:0042555)
0.0 0.1 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 3.8 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.1 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.1 GO:0005828 kinetochore microtubule(GO:0005828)
0.0 0.2 GO:0009986 cell surface(GO:0009986)
0.0 0.1 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.1 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.0 0.1 GO:0012507 ER to Golgi transport vesicle membrane(GO:0012507)
0.0 0.1 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.7 9.9 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
1.3 3.8 GO:0051738 xanthophyll binding(GO:0051738)
0.7 15.3 GO:0016168 chlorophyll binding(GO:0016168)
0.7 2.6 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.6 8.3 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.5 1.4 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
0.4 1.3 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.4 1.3 GO:0004528 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.4 1.7 GO:0004349 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.4 2.2 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.4 1.2 GO:0016842 amidine-lyase activity(GO:0016842)
0.4 1.9 GO:0004333 fumarate hydratase activity(GO:0004333)
0.3 1.7 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.3 1.7 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.3 1.0 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.3 1.0 GO:0010242 oxygen evolving activity(GO:0010242)
0.3 10.5 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.3 1.3 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.3 1.3 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.3 1.6 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.3 1.5 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.3 1.2 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.3 0.9 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.3 1.4 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.3 0.8 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.3 1.1 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.3 0.8 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.3 0.8 GO:0009374 biotin binding(GO:0009374)
0.3 0.8 GO:0008519 ammonium transmembrane transporter activity(GO:0008519) urea transmembrane transporter activity(GO:0015204)
0.3 0.8 GO:0080106 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.3 0.8 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.3 0.8 GO:0042577 sphingosine-1-phosphate phosphatase activity(GO:0042392) lipid phosphatase activity(GO:0042577)
0.2 1.2 GO:0035620 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.2 0.9 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.2 0.9 GO:0008301 DNA binding, bending(GO:0008301)
0.2 0.9 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.2 0.8 GO:0004556 alpha-amylase activity(GO:0004556)
0.2 0.8 GO:0000213 tRNA-intron endonuclease activity(GO:0000213)
0.2 1.9 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.2 2.0 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.2 1.8 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.2 0.5 GO:0004359 glutaminase activity(GO:0004359)
0.2 0.5 GO:0015087 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.2 0.5 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.2 1.1 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.2 0.6 GO:0009885 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.2 1.4 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 1.0 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.1 0.6 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.1 0.6 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.1 0.4 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 0.4 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.1 3.0 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 0.4 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.1 3.2 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 0.5 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.1 1.1 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.1 0.4 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 1.1 GO:0030976 transferase activity, transferring aldehyde or ketonic groups(GO:0016744) thiamine pyrophosphate binding(GO:0030976)
0.1 0.5 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.1 0.3 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.1 1.2 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.1 0.3 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.1 0.6 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 0.6 GO:0004049 anthranilate synthase activity(GO:0004049)
0.1 0.5 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
0.1 2.1 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.7 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.1 0.9 GO:0043495 protein anchor(GO:0043495)
0.1 2.2 GO:0000250 lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.1 1.1 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.1 1.5 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.1 0.6 GO:0016426 tRNA (adenine) methyltransferase activity(GO:0016426)
0.1 0.3 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.1 3.7 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.1 0.5 GO:0030267 glyoxylate reductase (NADP) activity(GO:0030267)
0.1 1.8 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 0.2 GO:0032791 lead ion binding(GO:0032791)
0.1 0.4 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.1 0.9 GO:0008199 ferric iron binding(GO:0008199)
0.1 1.4 GO:0008146 sulfotransferase activity(GO:0008146)
0.1 0.8 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 0.5 GO:0003933 GTP cyclohydrolase activity(GO:0003933)
0.1 0.5 GO:0048487 beta-tubulin binding(GO:0048487)
0.1 0.4 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.2 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.1 0.3 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.1 0.7 GO:0004549 ribonuclease P activity(GO:0004526) tRNA-specific ribonuclease activity(GO:0004549)
0.1 1.7 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 0.2 GO:0097617 annealing activity(GO:0097617)
0.1 0.6 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.1 0.6 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 0.9 GO:0000036 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process(GO:0000036) ACP phosphopantetheine attachment site binding(GO:0044620) prosthetic group binding(GO:0051192)
0.1 0.3 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.1 0.3 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.1 0.6 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.1 0.8 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.1 0.3 GO:0046870 cadmium ion binding(GO:0046870)
0.1 1.6 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 0.5 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.1 1.9 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 1.1 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 0.4 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.1 0.9 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 2.1 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.2 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.1 1.0 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 0.4 GO:0052853 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.1 0.2 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.1 0.8 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 0.3 GO:0016312 inositol bisphosphate phosphatase activity(GO:0016312)
0.1 0.3 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.1 0.7 GO:0008097 5S rRNA binding(GO:0008097)
0.0 2.1 GO:0019843 rRNA binding(GO:0019843)
0.0 0.2 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.0 0.1 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.0 1.0 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.2 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.0 1.1 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.7 GO:0003727 single-stranded RNA binding(GO:0003727)
0.0 0.3 GO:0016851 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.0 0.4 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.3 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.5 GO:0009008 DNA-methyltransferase activity(GO:0009008)
0.0 0.4 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.0 0.2 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.0 0.9 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 8.6 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.1 GO:0071771 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.0 0.1 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.1 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.0 0.3 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.0 0.1 GO:0015462 protein-transmembrane transporting ATPase activity(GO:0015462)
0.0 0.3 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.0 0.1 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.0 0.1 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.2 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.0 1.3 GO:0022884 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.0 0.1 GO:0051731 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113) polynucleotide 5'-hydroxyl-kinase activity(GO:0051731)
0.0 0.1 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.0 0.1 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.0 1.0 GO:0005179 hormone activity(GO:0005179)
0.0 0.2 GO:0051117 ATPase binding(GO:0051117)
0.0 0.2 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.0 0.2 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.3 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.3 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 0.3 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.3 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.0 0.4 GO:0003746 translation elongation factor activity(GO:0003746)
0.0 0.2 GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity(GO:0015165)
0.0 0.1 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.0 0.3 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.1 GO:0036456 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.0 2.6 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.3 GO:0004860 protein kinase inhibitor activity(GO:0004860)
0.0 0.7 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.1 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.0 3.3 GO:0030246 carbohydrate binding(GO:0030246)
0.0 0.2 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.0 0.2 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 3.5 GO:0043531 ADP binding(GO:0043531)
0.0 0.1 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.0 0.2 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.0 0.4 GO:0015248 sterol transporter activity(GO:0015248)
0.0 6.0 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 0.6 GO:0016597 amino acid binding(GO:0016597)
0.0 0.7 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.4 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 3.8 GO:0008168 methyltransferase activity(GO:0008168)
0.0 1.2 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 0.1 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.5 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.6 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.1 GO:0019534 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 0.1 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.1 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.0 0.3 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.3 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.0 0.1 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.1 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.0 0.1 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.1 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.1 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.3 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 0.1 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.0 0.6 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.5 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.2 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 3.9 GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen(GO:0016705)
0.0 0.2 GO:0008143 poly(A) binding(GO:0008143)
0.0 0.3 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.0 6.7 GO:0003729 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 7.0 PID CMYB PATHWAY C-MYB transcription factor network
0.3 0.8 PID AVB3 OPN PATHWAY Osteopontin-mediated events
0.2 1.3 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.1 0.8 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.1 1.0 PID E2F PATHWAY E2F transcription factor network
0.1 0.6 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.3 PID ATF2 PATHWAY ATF-2 transcription factor network
0.1 0.2 PID ARF 3PATHWAY Arf1 pathway
0.0 0.2 PID CIRCADIAN PATHWAY Circadian rhythm pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 10.7 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.4 1.3 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.2 0.6 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 1.2 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 0.6 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.1 2.3 REACTOME PEPTIDE CHAIN ELONGATION Genes involved in Peptide chain elongation
0.1 0.4 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.1 0.2 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.1 0.2 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport
0.1 0.4 REACTOME SIGNALING BY PDGF Genes involved in Signaling by PDGF
0.0 0.1 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.0 0.2 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.0 0.3 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production