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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G18770

Z-value: 1.04

Transcription factors associated with AT4G18770

Gene Symbol Gene ID Gene Info
AT4G18770 myb domain protein 98

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB98arTal_v1_Chr4_+_10311030_103110300.624.3e-04Click!

Activity profile of AT4G18770 motif

Sorted Z-values of AT4G18770 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_15983199 6.47 AT3G44300.1
nitrilase 2
Chr5_-_15825566 5.95 AT5G39520.1
hypothetical protein (DUF1997)
Chr2_+_18066960 4.78 AT2G43510.1
trypsin inhibitor protein 1
Chr4_+_15828228 4.63 AT4G32810.1
AT4G32810.2
carotenoid cleavage dioxygenase 8
Chr5_+_16290386 4.62 AT5G40690.1
histone-lysine N-methyltransferase trithorax-like protein
Chr1_+_10892445 4.54 AT1G30700.1
FAD-binding Berberine family protein
Chr1_-_30053936 4.52 AT1G79900.1
Mitochondrial substrate carrier family protein
Chr4_-_12337599 4.49 AT4G23680.1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr2_+_13581534 4.36 AT2G31945.1
transmembrane protein
Chr2_+_7606728 4.34 AT2G17500.2
AT2G17500.1
AT2G17500.3
AT2G17500.4
Auxin efflux carrier family protein
Chr1_-_3752780 4.25 AT1G11190.1
bifunctional nuclease i
Chr4_+_285876 4.24 AT4G00700.2
AT4G00700.1
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Chr4_+_7156150 4.23 AT4G11910.1
STAY-GREEN-like protein
Chr1_-_460696 4.22 AT1G02310.1
AT1G02310.2
Glycosyl hydrolase superfamily protein
Chr5_-_4183354 4.21 AT5G13170.1
senescence-associated gene 29
Chr4_-_7026224 3.95 AT4G11650.1
osmotin 34
Chr5_-_17166032 3.94 AT5G42800.1
dihydroflavonol 4-reductase
Chr4_-_12853845 3.87 AT4G25000.1
alpha-amylase-like protein
Chr2_+_6244772 3.87 AT2G14620.2
AT2G14620.3
AT2G14620.1
xyloglucan endotransglucosylase/hydrolase 10
Chr5_+_3239617 3.81 AT5G10300.2
methyl esterase 5
Chr2_+_15830870 3.81 AT2G37750.1
hypothetical protein
Chr2_-_18646606 3.80 AT2G45220.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_-_17076417 3.78 AT1G45145.1
thioredoxin H-type 5
Chr5_+_3239455 3.75 AT5G10300.1
methyl esterase 5
Chr3_-_1063103 3.75 AT3G04070.2
AT3G04070.1
NAC domain containing protein 47
Chr5_-_8659352 3.70 AT5G25110.1
CBL-interacting protein kinase 25
Chr5_-_23896702 3.66 AT5G59220.2
PP2C protein (Clade A protein phosphatases type 2C)
Chr1_+_21652988 3.64 AT1G58340.1
MATE efflux family protein
Chr2_+_7845923 3.64 AT2G18050.2
AT2G18050.1
histone H1-3
Chr2_+_18558885 3.62 AT2G44990.2
AT2G44990.3
AT2G44990.1
carotenoid cleavage dioxygenase 7
Chr3_-_19643276 3.61 AT3G52970.1
AT3G52970.2
cytochrome P450, family 76, subfamily G, polypeptide 1
Chr5_-_23896939 3.61 AT5G59220.1
PP2C protein (Clade A protein phosphatases type 2C)
Chr1_+_23887809 3.60 AT1G64360.1
hypothetical protein
Chr5_-_4151201 3.60 AT5G13080.1
WRKY DNA-binding protein 75
Chr4_+_10974456 3.60 AT4G20320.2
AT4G20320.4
AT4G20320.3
AT4G20320.1
AT4G20320.5
AT4G20320.6
CTP synthase family protein
Chr1_-_29622445 3.52 AT1G78780.1
AT1G78780.2
AT1G78780.4
pathogenesis-related family protein
Chr1_-_513698 3.51 AT1G02470.2
AT1G02470.1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr3_+_4603885 3.46 AT3G13950.1
ankyrin
Chr3_+_6089381 3.44 AT3G17790.1
purple acid phosphatase 17
Chr5_+_24958125 3.42 AT5G62150.1
peptidoglycan-binding LysM domain-containing protein
Chr4_-_17494279 3.40 AT4G37150.1
methyl esterase 9
Chr2_-_19291632 3.40 AT2G46950.2
AT2G46950.1
cytochrome P450, family 709, subfamily B, polypeptide 2
Chr5_-_2176446 3.37 AT5G07010.1
sulfotransferase 2A
Chr2_+_17251819 3.34 AT2G41380.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_-_7999552 3.33 AT3G22560.1
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr5_+_579744 3.28 AT5G02580.1
AT5G02580.3
AT5G02580.2
argininosuccinate lyase
Chr4_+_6491017 3.27 AT4G10500.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_+_5389952 3.27 AT1G15670.1
Galactose oxidase/kelch repeat superfamily protein
Chr5_-_9000345 3.23 AT5G25820.1
Exostosin family protein
Chr2_+_12322386 3.21 AT2G28710.1
C2H2-type zinc finger family protein
Chr4_+_18409846 3.20 AT4G39670.1
Glycolipid transfer protein (GLTP) family protein
Chr2_+_8097420 3.19 AT2G18690.2
AT2G18690.1
transmembrane protein
Chr5_+_6826365 3.17 AT5G20230.1
blue-copper-binding protein
Chr1_+_22824414 3.17 AT1G61800.2
AT1G61800.1
glucose-6-phosphate/phosphate translocator 2
Chr1_+_23072222 3.15 AT1G62370.1
RING/U-box superfamily protein
Chr3_+_19089026 3.08 AT3G51440.1
Calcium-dependent phosphotriesterase superfamily protein
Chr4_-_16347364 3.07 AT4G34135.1
AT4G34135.2
UDP-glucosyltransferase 73B2
Chr1_+_26122080 3.07 AT1G69490.1
NAC-like, activated by AP3/PI
Chr5_+_523257 3.07 AT5G02420.1
cyclin-dependent kinase inhibitor SMR3-like protein
Chr1_+_2867203 3.06 AT1G08920.1
AT1G08920.2
AT1G08920.3
ERD (early response to dehydration) six-like 1
Chr4_-_6718550 3.05 AT4G10960.1
UDP-D-glucose/UDP-D-galactose 4-epimerase 5
Chr4_-_9393650 3.04 AT4G16690.1
methyl esterase 16
Chr2_-_8471644 3.00 AT2G19570.1
cytidine deaminase 1
Chr3_-_4079627 2.97 AT3G12830.1
SAUR-like auxin-responsive protein family
Chr1_-_23690807 2.97 AT1G63840.1
RING/U-box superfamily protein
Chr3_-_18241341 2.97 AT3G49210.2
O-acyltransferase (WSD1-like) family protein
Chr5_+_22460550 2.95 AT5G55410.2
AT5G55410.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_-_12345652 2.94 AT4G23700.2
cation/H+ exchanger 17
Chr3_-_18241524 2.92 AT3G49210.1
O-acyltransferase (WSD1-like) family protein
Chr1_+_24763941 2.89 AT1G66390.1
myb domain protein 90
Chr4_-_12346051 2.87 AT4G23700.1
cation/H+ exchanger 17
Chr3_-_8119490 2.85 AT3G22910.1
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr2_-_275002 2.84 AT2G01610.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_-_612324 2.84 AT1G02790.1
polygalacturonase 4
Chr2_+_14685170 2.81 AT2G34810.1
FAD-binding Berberine family protein
Chr1_+_202103 2.80 AT1G01560.3
AT1G01560.2
AT1G01560.1
AT1G01560.4
MAP kinase 11
Chr2_+_6608561 2.79 AT2G15220.1
Plant basic secretory protein (BSP) family protein
Chr4_+_14065992 2.78 AT4G28460.1
transmembrane protein
Chr2_-_16780368 2.77 AT2G40170.1
Stress induced protein
Chr3_+_18634546 2.75 AT3G50260.1
cooperatively regulated by ethylene and jasmonate 1
Chr1_-_28318362 2.74 AT1G75450.1
AT1G75450.2
cytokinin oxidase 5
Chr3_-_1956397 2.73 AT3G06420.1
Ubiquitin-like superfamily protein
Chr1_-_23019494 2.71 AT1G62300.1
WRKY family transcription factor
Chr3_-_84901 2.66 AT3G01270.1
Pectate lyase family protein
Chr1_+_6515373 2.66 AT1G18870.1
AT1G18870.3
isochorismate synthase 2
Chr4_-_10182264 2.64 AT4G18425.1
transmembrane protein, putative (DUF679)
Chr5_+_4461554 2.63 AT5G13820.2
telomeric DNA binding protein 1
Chr5_-_24836933 2.62 AT5G61820.1
AT5G61820.2
stress up-regulated Nod 19 protein
Chr4_-_15507176 2.61 AT4G32070.2
AT4G32070.1
Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
Chr4_-_7410406 2.61 AT4G12490.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_26096114 2.61 AT5G65300.1
hypothetical protein
Chr5_-_5904380 2.60 AT5G17860.2
calcium exchanger 7
Chr5_+_26772644 2.59 AT5G67080.1
mitogen-activated protein kinase kinase kinase 19
Chr3_-_20361560 2.58 AT3G54950.1
patatin-like protein 6
Chr5_-_5904532 2.58 AT5G17860.1
calcium exchanger 7
Chr3_-_6788424 2.58 AT3G19550.1
glutamate racemase
Chr2_+_16997078 2.55 AT2G40740.3
AT2G40740.2
AT2G40740.1
WRKY DNA-binding protein 55
Chr5_+_15501126 2.54 AT5G38710.1
AT5G38710.2
Methylenetetrahydrofolate reductase family protein
Chr1_+_6100964 2.54 AT1G17745.1
AT1G17745.2
D-3-phosphoglycerate dehydrogenase
Chr5_+_4460840 2.51 AT5G13820.1
telomeric DNA binding protein 1
Chr3_+_25355 2.51 AT3G01080.2
AT3G01080.3
AT3G01080.1
WRKY DNA-binding protein 58
Chr2_-_8447355 2.49 AT2G19500.1
cytokinin oxidase 2
Chr4_-_17467109 2.49 AT4G37070.1
AT4G37070.4
AT4G37070.3
AT4G37070.2
Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
Chr2_+_14031998 2.49 AT2G33080.1
receptor like protein 28
Chr1_+_6508797 2.47 AT1G18860.1
WRKY DNA-binding protein 61
Chr3_+_17692666 2.46 AT3G47950.1
H[+]-ATPase 4
Chr3_+_6093990 2.45 AT3G17810.1
pyrimidine 1
Chr1_-_659980 2.43 AT1G02920.1
glutathione S-transferase 7
Chr1_-_27466348 2.43 AT1G73010.1
inorganic pyrophosphatase 1
Chr5_-_10213598 2.42 AT5G28237.1
AT5G28237.2
Pyridoxal-5'-phosphate-dependent enzyme family protein
Chr1_-_16917053 2.40 AT1G44800.1
nodulin MtN21 /EamA-like transporter family protein
Chr3_+_9685932 2.40 AT3G26470.1
Powdery mildew resistance protein, RPW8 domain-containing protein
Chr3_+_17692853 2.39 AT3G47950.2
H[+]-ATPase 4
Chr5_-_18721744 2.36 AT5G46180.1
ornithine-delta-aminotransferase
Chr1_+_28940147 2.36 AT1G77000.2
AT1G77000.3
RNI-like superfamily protein
Chr1_-_5645443 2.36 AT1G16510.1
SAUR-like auxin-responsive protein family
Chr2_+_8207199 2.35 AT2G18950.1
AT2G18950.2
homogentisate phytyltransferase 1
Chr5_+_2352436 2.35 AT5G07430.1
Pectin lyase-like superfamily protein
Chr5_+_206432 2.34 AT5G01520.2
AT5G01520.1
RING/U-box superfamily protein
Chr1_+_28655208 2.34 AT1G76390.2
AT1G76390.1
ARM repeat superfamily protein
Chr1_-_2282828 2.33 AT1G07430.1
highly ABA-induced PP2C protein 2
Chr2_+_11620076 2.31 AT2G27180.1
hypothetical protein
Chr5_+_2938193 2.31 AT5G09440.1
EXORDIUM like 4
Chr3_+_4355138 2.30 AT3G13400.2
SKU5 similar 13
Chr5_-_16085213 2.30 AT5G40240.3
AT5G40240.1
nodulin MtN21 /EamA-like transporter family protein
Chr3_+_23377976 2.29 AT3G63280.1
AT3G63280.3
NIMA-related kinase 4
Chr1_+_28940486 2.28 AT1G77000.4
AT1G77000.1
RNI-like superfamily protein
Chr5_-_2081685 2.27 AT5G06730.1
Peroxidase superfamily protein
Chr1_+_6515644 2.25 AT1G18870.2
isochorismate synthase 2
Chr3_+_4354923 2.25 AT3G13400.1
SKU5 similar 13
Chr2_+_15514923 2.25 AT2G36950.1
Heavy metal transport/detoxification superfamily protein
Chr1_+_26647684 2.25 AT1G70680.2
Caleosin-related family protein
Chr4_-_11585391 2.24 AT4G21830.2
methionine sulfoxide reductase B7
Chr3_-_19165322 2.24 AT3G51660.1
Tautomerase/MIF superfamily protein
Chr1_-_977761 2.23 AT1G03850.1
AT1G03850.2
AT1G03850.3
Glutaredoxin family protein
Chr1_-_7265445 2.22 AT1G20880.3
AT1G20880.1
AT1G20880.2
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_-_22984359 2.22 AT1G62200.2
AT1G62200.1
AT1G62200.3
Major facilitator superfamily protein
Chr1_-_13365172 2.19 AT1G35910.1
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr3_+_16466144 2.18 AT3G45010.1
serine carboxypeptidase-like 48
Chr4_-_11971203 2.18 AT4G22780.1
ACT domain repeat 7
Chr4_+_12909463 2.18 AT4G25170.1
AT4G25170.2
Uncharacterized conserved protein (UCP012943)
Chr4_+_13236253 2.17 AT4G26120.2
Ankyrin repeat family protein / BTB/POZ domain-containing protein
Chr4_-_11971357 2.17 AT4G22780.2
ACT domain repeat 7
Chr3_-_1776840 2.17 AT3G05937.1
hypothetical protein
Chr5_+_25550937 2.17 AT5G63850.1
amino acid permease 4
Chr5_-_1470937 2.17 AT5G04980.4
AT5G04980.3
AT5G04980.1
AT5G04980.2
DNAse I-like superfamily protein
Chr5_+_25322975 2.17 AT5G63130.2
AT5G63130.1
Octicosapeptide/Phox/Bem1p family protein
Chr4_+_13236448 2.16 AT4G26120.1
Ankyrin repeat family protein / BTB/POZ domain-containing protein
Chr5_-_19542760 2.16 AT5G48180.1
nitrile specifier protein 5
Chr5_+_12558154 2.16 AT5G33290.1
xylogalacturonan deficient 1
Chr5_+_19166859 2.15 AT5G47200.1
RAB GTPase homolog 1A
Chr3_+_22925742 2.15 AT3G61900.1
SAUR-like auxin-responsive protein family
Chr2_+_8647721 2.15 AT2G20030.1
RING/U-box superfamily protein
Chr4_+_15862117 2.14 AT4G32870.1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr5_-_18506382 2.14 AT5G45630.1
senescence regulator (Protein of unknown function, DUF584)
Chr3_-_845096 2.14 AT3G03530.1
non-specific phospholipase C4
Chr4_-_11585542 2.13 AT4G21830.1
methionine sulfoxide reductase B7
Chr1_-_29623171 2.12 AT1G78780.5
pathogenesis-related family protein
Chr3_-_6804114 2.12 AT3G19580.2
zinc-finger protein 2
Chr2_-_12938834 2.12 AT2G30360.1
SOS3-interacting protein 4
Chr5_+_25721733 2.12 AT5G64310.1
arabinogalactan protein 1
Chr1_-_167842 2.12 AT1G01453.2
late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
Chr1_-_7906969 2.10 AT1G22400.1
UDP-Glycosyltransferase superfamily protein
Chr5_+_23003909 2.10 AT5G56870.1
beta-galactosidase 4
Chr5_+_2345758 2.09 AT5G07410.1
Pectin lyase-like superfamily protein
Chr3_-_6804296 2.09 AT3G19580.1
zinc-finger protein 2
Chr3_-_3386533 2.08 AT3G10815.1
RING/U-box superfamily protein
Chr1_+_26636110 2.08 AT1G70640.1
octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
Chr4_-_386479 2.08 AT4G00900.2
ER-type Ca2+-ATPase 2
Chr5_-_315405 2.07 AT5G01820.1
serine/threonine protein kinase 1
Chr4_+_9385119 2.07 AT4G16670.2
AT4G16670.3
AT4G16670.1
auxin canalization protein (DUF828)
Chr3_-_10898841 2.07 AT3G28890.1
AT3G28890.2
receptor like protein 43
Chr4_-_16942060 2.07 AT4G35750.1
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Chr5_-_16084957 2.07 AT5G40240.2
nodulin MtN21 /EamA-like transporter family protein
Chr2_-_16215264 2.06 AT2G38790.1
hypothetical protein
Chr2_-_16115204 2.05 AT2G38490.1
CBL-interacting Serine/Threonine-kinase
Chr2_-_19332659 2.05 AT2G47050.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_+_5258715 2.05 AT3G15534.1
hypothetical protein
Chr4_-_386850 2.05 AT4G00900.1
ER-type Ca2+-ATPase 2
Chr1_-_3756998 2.04 AT1G11210.1
cotton fiber protein, putative (DUF761)
Chr5_-_15279317 2.04 AT5G38240.1
AT5G38240.2
AT5G38240.3
Protein kinase family protein
Chr1_-_29623337 2.04 AT1G78780.3
pathogenesis-related family protein
Chr1_+_26647205 2.03 AT1G70680.1
Caleosin-related family protein
Chr3_-_17475274 2.03 AT3G47420.3
AT3G47420.1
AT3G47420.2
putative glycerol-3-phosphate transporter 1
Chr5_+_9648508 2.02 AT5G27350.1
Major facilitator superfamily protein
Chr2_+_837801 2.00 AT2G02870.3
AT2G02870.1
AT2G02870.2
Galactose oxidase/kelch repeat superfamily protein
Chr1_+_455688 2.00 AT1G02305.1
Cysteine proteinases superfamily protein
Chr1_+_10244453 2.00 AT1G29290.1
B-cell lymphoma 6 protein
Chr4_-_10714745 1.99 AT4G19700.1
SBP (S-ribonuclease binding protein) family protein
Chr3_+_6536534 1.99 AT3G18950.1
Transducin/WD40 repeat-like superfamily protein
Chr3_-_10120645 1.99 AT3G27330.1
zinc finger (C3HC4-type RING finger) family protein
Chr5_+_25210301 1.98 AT5G62770.1
membrane-associated kinase regulator, putative (DUF1645)
Chr4_+_8545025 1.98 AT4G14950.1
AT4G14950.3
AT4G14950.2
SNARE associated Golgi protein family
Chr5_-_25813620 1.98 AT5G64570.3
AT5G64570.2
AT5G64570.1
beta-D-xylosidase 4
Chr1_-_21468505 1.98 AT1G58030.1
cationic amino acid transporter 2
Chr3_+_20736508 1.97 AT3G55880.1
AT3G55880.3
AT3G55880.2
AT3G55880.4
Alpha/beta hydrolase related protein
Chr3_-_9471039 1.96 AT3G25882.1
NIM1-interacting 2
Chr4_-_10404393 1.96 AT4G18990.1
AT4G18990.2
xyloglucan endotransglucosylase/hydrolase 29
Chr5_+_26864846 1.95 AT5G67340.2
ARM repeat superfamily protein
Chr4_+_13210230 1.95 AT4G26050.1
plant intracellular ras group-related LRR 8

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G18770

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.8 8.3 GO:0016110 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
1.9 7.6 GO:0016139 glycoside catabolic process(GO:0016139)
1.6 6.3 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
1.2 3.6 GO:0010055 atrichoblast differentiation(GO:0010055)
1.1 4.5 GO:0015697 quaternary ammonium group transport(GO:0015697)
1.1 3.3 GO:0045764 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
1.1 3.2 GO:0006056 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
1.1 3.2 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.9 3.4 GO:0030643 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.8 2.5 GO:0019859 thymine catabolic process(GO:0006210) uracil catabolic process(GO:0006212) beta-alanine biosynthetic process(GO:0019483) thymine metabolic process(GO:0019859)
0.8 2.4 GO:0046203 spermidine catabolic process(GO:0046203)
0.8 3.2 GO:0016098 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.8 2.3 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.8 2.3 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.7 6.5 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.7 6.2 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.7 3.4 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.7 3.4 GO:0006569 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.7 0.7 GO:0010618 aerenchyma formation(GO:0010618)
0.7 2.7 GO:0080029 cellular response to boron-containing substance levels(GO:0080029)
0.6 3.7 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.6 0.6 GO:0071280 cellular response to copper ion(GO:0071280)
0.6 4.3 GO:0080187 floral organ senescence(GO:0080187)
0.6 9.7 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.6 2.4 GO:0006527 arginine catabolic process(GO:0006527)
0.6 4.1 GO:0043090 amino acid import(GO:0043090)
0.6 6.4 GO:0000304 response to singlet oxygen(GO:0000304)
0.6 1.7 GO:0009945 radial axis specification(GO:0009945)
0.6 1.7 GO:0030031 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.5 3.2 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.5 3.7 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.5 1.6 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.5 2.6 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.5 2.5 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.5 3.0 GO:0006216 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.5 1.5 GO:0009107 lipoate biosynthetic process(GO:0009107)
0.5 1.4 GO:0046521 sphingoid catabolic process(GO:0046521)
0.5 4.8 GO:0009405 pathogenesis(GO:0009405)
0.5 2.3 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.4 5.3 GO:0072506 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.4 2.2 GO:1902065 response to L-glutamate(GO:1902065)
0.4 1.7 GO:0015720 allantoin transport(GO:0015720)
0.4 7.8 GO:0015770 sucrose transport(GO:0015770)
0.4 1.3 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.4 5.4 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.4 2.1 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.4 1.7 GO:0045332 phospholipid translocation(GO:0045332)
0.4 4.1 GO:0016584 nucleosome positioning(GO:0016584)
0.4 0.4 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.4 1.2 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.4 1.1 GO:1900369 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.4 1.5 GO:0042040 molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040)
0.4 1.1 GO:0046459 short-chain fatty acid metabolic process(GO:0046459)
0.4 1.1 GO:0046704 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.4 2.9 GO:0031222 arabinan catabolic process(GO:0031222)
0.4 1.8 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.3 1.7 GO:0019323 pentose catabolic process(GO:0019323)
0.3 1.0 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.3 0.3 GO:0046133 pyrimidine ribonucleoside catabolic process(GO:0046133) pyrimidine nucleoside catabolic process(GO:0046135)
0.3 1.0 GO:0006659 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.3 4.2 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.3 1.9 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.3 15.7 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.3 0.9 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.3 0.9 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.3 1.2 GO:0035494 SNARE complex disassembly(GO:0035494)
0.3 0.6 GO:0032025 response to cobalt ion(GO:0032025)
0.3 0.9 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.3 1.5 GO:0030242 pexophagy(GO:0030242)
0.3 2.0 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.3 0.8 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.3 0.8 GO:0034625 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.3 1.4 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.3 3.3 GO:0009410 response to xenobiotic stimulus(GO:0009410)
0.3 1.3 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.3 9.7 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.3 0.8 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.3 3.1 GO:0033358 UDP-L-arabinose biosynthetic process(GO:0033358) extracellular polysaccharide biosynthetic process(GO:0045226) capsule polysaccharide biosynthetic process(GO:0045227) capsule organization(GO:0045230) extracellular polysaccharide metabolic process(GO:0046379)
0.2 1.7 GO:0009942 longitudinal axis specification(GO:0009942)
0.2 3.0 GO:0007584 response to nutrient(GO:0007584)
0.2 4.2 GO:0010555 response to mannitol(GO:0010555)
0.2 1.7 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.2 1.0 GO:0043620 regulation of DNA-templated transcription in response to stress(GO:0043620)
0.2 1.0 GO:0071836 nectar secretion(GO:0071836)
0.2 2.4 GO:1904030 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.2 0.7 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.2 1.2 GO:0070861 regulation of protein exit from endoplasmic reticulum(GO:0070861) positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.2 2.8 GO:0015749 monosaccharide transport(GO:0015749)
0.2 0.2 GO:0032000 positive regulation of fatty acid beta-oxidation(GO:0032000) positive regulation of lipid catabolic process(GO:0050996)
0.2 0.9 GO:0000012 single strand break repair(GO:0000012)
0.2 2.5 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.2 4.5 GO:0006012 galactose metabolic process(GO:0006012)
0.2 2.0 GO:1902025 nitrate import(GO:1902025)
0.2 0.9 GO:0032527 protein exit from endoplasmic reticulum(GO:0032527)
0.2 1.5 GO:0006552 leucine catabolic process(GO:0006552)
0.2 2.6 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.2 1.5 GO:0009268 response to pH(GO:0009268)
0.2 0.6 GO:0051204 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.2 0.8 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.2 2.7 GO:0051262 protein tetramerization(GO:0051262)
0.2 1.2 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.2 0.6 GO:0006884 cell volume homeostasis(GO:0006884)
0.2 0.8 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.2 0.8 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.2 0.8 GO:1902916 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.2 1.9 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.2 10.2 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.2 0.9 GO:0015074 DNA integration(GO:0015074)
0.2 1.5 GO:0080183 response to photooxidative stress(GO:0080183)
0.2 0.9 GO:0009590 detection of gravity(GO:0009590)
0.2 0.5 GO:0071494 cellular response to UV-C(GO:0071494)
0.2 0.7 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.2 0.2 GO:0009188 UDP biosynthetic process(GO:0006225) ribonucleoside diphosphate biosynthetic process(GO:0009188) pyrimidine ribonucleoside diphosphate metabolic process(GO:0009193) pyrimidine ribonucleoside diphosphate biosynthetic process(GO:0009194) UDP metabolic process(GO:0046048)
0.2 11.7 GO:0006885 regulation of pH(GO:0006885)
0.2 1.4 GO:0031537 regulation of anthocyanin metabolic process(GO:0031537)
0.2 1.0 GO:0048530 fruit morphogenesis(GO:0048530)
0.2 7.8 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.2 0.6 GO:0018410 C-terminal protein lipidation(GO:0006501) C-terminal protein amino acid modification(GO:0018410)
0.2 1.9 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.2 0.6 GO:0009304 tRNA transcription(GO:0009304)
0.2 0.6 GO:0055078 sodium ion homeostasis(GO:0055078)
0.2 1.3 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.2 1.1 GO:0045899 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.2 0.8 GO:0033617 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.2 1.2 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.1 0.4 GO:0034389 lipid particle organization(GO:0034389)
0.1 0.4 GO:0033967 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.1 0.7 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 3.5 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.1 0.4 GO:0080182 histone H3-K4 trimethylation(GO:0080182)
0.1 0.9 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.1 0.9 GO:0045487 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 1.2 GO:0032456 endocytic recycling(GO:0032456)
0.1 2.6 GO:0019374 galactolipid metabolic process(GO:0019374)
0.1 0.6 GO:0015700 arsenite transport(GO:0015700)
0.1 0.6 GO:0099636 cytoplasmic streaming(GO:0099636)
0.1 6.6 GO:0006874 cellular calcium ion homeostasis(GO:0006874)
0.1 0.6 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 0.6 GO:0043486 histone exchange(GO:0043486)
0.1 3.7 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.1 0.7 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.1 2.6 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.1 2.6 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.1 5.3 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.1 0.4 GO:0010508 positive regulation of autophagy(GO:0010508)
0.1 2.5 GO:0006995 cellular response to nitrogen starvation(GO:0006995)
0.1 2.0 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 2.1 GO:0006538 glutamate catabolic process(GO:0006538)
0.1 0.4 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.1 0.1 GO:2000068 regulation of defense response to insect(GO:2000068)
0.1 26.8 GO:0071456 cellular response to hypoxia(GO:0071456)
0.1 1.9 GO:0006465 signal peptide processing(GO:0006465)
0.1 6.4 GO:0072329 monocarboxylic acid catabolic process(GO:0072329)
0.1 0.8 GO:0006567 threonine catabolic process(GO:0006567)
0.1 1.3 GO:0002757 pattern recognition receptor signaling pathway(GO:0002221) immune response-activating signal transduction(GO:0002757) innate immune response-activating signal transduction(GO:0002758)
0.1 1.8 GO:0043248 proteasome assembly(GO:0043248)
0.1 0.6 GO:0015867 ADP transport(GO:0015866) ATP transport(GO:0015867) purine ribonucleotide transport(GO:0015868) AMP transport(GO:0080121)
0.1 2.1 GO:0051553 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.1 0.5 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.1 1.3 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 5.1 GO:0006813 potassium ion transport(GO:0006813)
0.1 1.9 GO:0061572 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.1 6.4 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.1 0.5 GO:0060149 negative regulation of posttranscriptional gene silencing(GO:0060149)
0.1 0.5 GO:0010071 root meristem specification(GO:0010071)
0.1 0.6 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.1 1.0 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.1 0.2 GO:0071323 cellular response to chitin(GO:0071323)
0.1 1.1 GO:0010088 phloem development(GO:0010088)
0.1 0.6 GO:0000056 ribosomal small subunit export from nucleus(GO:0000056)
0.1 1.0 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.1 0.7 GO:0048446 petal morphogenesis(GO:0048446)
0.1 0.5 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.1 0.4 GO:0009445 putrescine metabolic process(GO:0009445) putrescine biosynthetic process(GO:0009446) putrescine biosynthetic process from arginine(GO:0033388)
0.1 1.1 GO:0016925 protein sumoylation(GO:0016925)
0.1 0.5 GO:1900363 positive regulation of plant-type hypersensitive response(GO:0034052) regulation of mRNA polyadenylation(GO:1900363)
0.1 0.5 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.1 0.4 GO:0035305 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.1 0.6 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.1 0.2 GO:0051222 positive regulation of protein transport(GO:0051222) positive regulation of intracellular protein transport(GO:0090316) positive regulation of cytoplasmic transport(GO:1903651) positive regulation of cellular protein localization(GO:1903829) positive regulation of establishment of protein localization(GO:1904951)
0.1 1.4 GO:0009901 anther dehiscence(GO:0009901)
0.1 0.2 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.1 2.6 GO:0050826 response to freezing(GO:0050826)
0.1 0.9 GO:0018210 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.1 0.8 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.1 1.4 GO:0048766 root hair initiation(GO:0048766)
0.1 0.6 GO:0009819 drought recovery(GO:0009819)
0.1 0.6 GO:0070542 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.1 4.7 GO:0009631 cold acclimation(GO:0009631)
0.1 1.5 GO:0023014 signal transduction by protein phosphorylation(GO:0023014)
0.1 0.4 GO:0000912 assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) phragmoplast assembly(GO:0000914) assembly of actomyosin apparatus involved in mitotic cytokinesis(GO:1902407)
0.1 0.4 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.1 1.0 GO:0045116 protein neddylation(GO:0045116)
0.1 5.8 GO:0009624 response to nematode(GO:0009624)
0.1 3.2 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.1 5.8 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.1 0.3 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414) mitochondrial tRNA processing(GO:0090646)
0.1 2.9 GO:0009825 multidimensional cell growth(GO:0009825)
0.1 0.7 GO:0006491 N-glycan processing(GO:0006491)
0.1 0.2 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.1 0.2 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.1 0.8 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.1 2.4 GO:0006334 nucleosome assembly(GO:0006334)
0.1 0.7 GO:0043462 regulation of ATPase activity(GO:0043462)
0.1 1.5 GO:0009395 phospholipid catabolic process(GO:0009395)
0.1 0.8 GO:0017157 regulation of exocytosis(GO:0017157)
0.1 0.2 GO:0018279 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.1 0.7 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.1 0.4 GO:0060866 leaf abscission(GO:0060866)
0.1 0.2 GO:0042891 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891) toxin transport(GO:1901998)
0.1 3.4 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 0.4 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 2.1 GO:0016575 histone deacetylation(GO:0016575)
0.1 0.4 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.1 0.6 GO:0080186 developmental vegetative growth(GO:0080186)
0.1 0.5 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 0.3 GO:0006741 NADP biosynthetic process(GO:0006741)
0.1 1.2 GO:0080156 mitochondrial mRNA modification(GO:0080156)
0.1 1.3 GO:0009638 phototropism(GO:0009638)
0.1 0.9 GO:0051865 protein autoubiquitination(GO:0051865)
0.1 2.3 GO:0032200 telomere maintenance(GO:0000723) telomere organization(GO:0032200)
0.1 0.1 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.1 0.8 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.1 0.3 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.1 2.0 GO:0010017 red or far-red light signaling pathway(GO:0010017)
0.1 0.8 GO:0006914 autophagy(GO:0006914)
0.1 0.8 GO:0048359 mucilage metabolic process involved in seed coat development(GO:0048359)
0.1 0.2 GO:1905182 regulation of urease activity(GO:1905181) positive regulation of urease activity(GO:1905182)
0.1 0.8 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.1 1.4 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.1 0.4 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.1 0.5 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.1 0.6 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.1 1.2 GO:0009583 phototransduction(GO:0007602) detection of light stimulus(GO:0009583) red, far-red light phototransduction(GO:0009585)
0.1 0.6 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 1.7 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.1 1.0 GO:0006863 purine nucleobase transport(GO:0006863)
0.1 0.3 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.1 0.2 GO:0048480 stigma development(GO:0048480)
0.1 1.8 GO:0010286 heat acclimation(GO:0010286)
0.1 0.4 GO:0015865 purine nucleotide transport(GO:0015865)
0.1 0.4 GO:1902074 response to salt(GO:1902074)
0.1 0.7 GO:0071900 regulation of protein serine/threonine kinase activity(GO:0071900)
0.1 0.7 GO:0010215 cellulose microfibril organization(GO:0010215)
0.1 0.8 GO:0097031 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.1 2.3 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.1 1.4 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.1 0.3 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.1 1.8 GO:0007033 vacuole organization(GO:0007033)
0.1 0.4 GO:0018344 protein geranylgeranylation(GO:0018344)
0.1 0.2 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.1 2.3 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 0.1 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.0 0.3 GO:0042219 cellular modified amino acid catabolic process(GO:0042219)
0.0 0.2 GO:0015691 cadmium ion transport(GO:0015691)
0.0 0.7 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 0.4 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 1.8 GO:0010941 regulation of cell death(GO:0010941)
0.0 1.1 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0 3.4 GO:0009615 response to virus(GO:0009615)
0.0 2.4 GO:0010256 endomembrane system organization(GO:0010256)
0.0 1.4 GO:0016109 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.0 0.2 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.2 GO:0090114 COPII-coated vesicle budding(GO:0090114)
0.0 0.5 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.1 GO:0045860 positive regulation of protein kinase activity(GO:0045860)
0.0 0.2 GO:1902326 positive regulation of chlorophyll biosynthetic process(GO:1902326)
0.0 0.1 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.0 1.1 GO:0016042 lipid catabolic process(GO:0016042)
0.0 0.3 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298) negative regulation of intracellular signal transduction(GO:1902532)
0.0 1.8 GO:0009846 pollen germination(GO:0009846)
0.0 0.3 GO:0042026 protein refolding(GO:0042026)
0.0 0.4 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.0 1.8 GO:0006888 ER to Golgi vesicle-mediated transport(GO:0006888)
0.0 0.8 GO:0030071 regulation of mitotic metaphase/anaphase transition(GO:0030071) regulation of metaphase/anaphase transition of cell cycle(GO:1902099)
0.0 0.4 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.0 1.4 GO:0048510 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.9 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.1 GO:0051180 vitamin transport(GO:0051180)
0.0 0.2 GO:0032366 intracellular sterol transport(GO:0032366)
0.0 0.9 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.0 0.7 GO:0007031 peroxisome organization(GO:0007031)
0.0 0.6 GO:2000008 protein localization to cell surface(GO:0034394) regulation of protein localization to cell surface(GO:2000008)
0.0 0.8 GO:0051085 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.0 0.6 GO:0035196 production of miRNAs involved in gene silencing by miRNA(GO:0035196)
0.0 6.9 GO:0016192 vesicle-mediated transport(GO:0016192)
0.0 0.4 GO:0002237 response to molecule of bacterial origin(GO:0002237)
0.0 1.7 GO:0034976 response to endoplasmic reticulum stress(GO:0034976)
0.0 1.0 GO:0030048 actin filament-based movement(GO:0030048)
0.0 0.7 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 1.8 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.3 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.0 0.1 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.0 2.7 GO:0006486 protein glycosylation(GO:0006486) macromolecule glycosylation(GO:0043413)
0.0 0.1 GO:0071267 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.0 3.3 GO:0045944 positive regulation of transcription from RNA polymerase II promoter(GO:0045944)
0.0 0.3 GO:0010076 maintenance of floral meristem identity(GO:0010076)
0.0 0.3 GO:0009299 mRNA transcription(GO:0009299)
0.0 5.9 GO:0044257 cellular protein catabolic process(GO:0044257)
0.0 0.2 GO:0080060 integument development(GO:0080060)
0.0 0.1 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)
0.0 0.3 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.2 GO:0006771 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.0 0.4 GO:0006289 nucleotide-excision repair(GO:0006289)
0.0 0.1 GO:0046900 tetrahydrofolylpolyglutamate metabolic process(GO:0046900)
0.0 0.6 GO:0006338 chromatin remodeling(GO:0006338)
0.0 5.0 GO:0016567 protein ubiquitination(GO:0016567)
0.0 0.3 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.6 GO:0048767 root hair elongation(GO:0048767)
0.0 0.1 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.0 0.2 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.9 GO:0010200 response to chitin(GO:0010200)
0.0 0.5 GO:0000380 alternative mRNA splicing, via spliceosome(GO:0000380)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 4.2 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.5 7.1 GO:0005801 cis-Golgi network(GO:0005801)
0.4 1.7 GO:0034271 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.4 3.6 GO:0017119 Golgi transport complex(GO:0017119)
0.4 6.7 GO:0031965 nuclear membrane(GO:0031965)
0.3 1.0 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.3 1.6 GO:0033263 CORVET complex(GO:0033263)
0.3 0.9 GO:0034457 Mpp10 complex(GO:0034457)
0.3 0.8 GO:0098576 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.3 4.4 GO:0000786 nucleosome(GO:0000786)
0.3 1.6 GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
0.2 1.4 GO:0017053 transcriptional repressor complex(GO:0017053)
0.2 2.7 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.2 0.9 GO:0030897 HOPS complex(GO:0030897)
0.2 0.6 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.2 3.2 GO:0072686 mitotic spindle(GO:0072686)
0.2 0.8 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.2 1.2 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.2 0.5 GO:0030689 Noc complex(GO:0030689)
0.2 2.5 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.2 3.4 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.2 0.5 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.2 1.4 GO:0030127 COPII vesicle coat(GO:0030127)
0.2 0.8 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.2 4.0 GO:0000781 chromosome, telomeric region(GO:0000781)
0.2 0.5 GO:0012507 ER to Golgi transport vesicle membrane(GO:0012507)
0.2 10.5 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.2 0.6 GO:0034715 pICln-Sm protein complex(GO:0034715)
0.1 0.7 GO:0098554 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.1 2.2 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.1 1.5 GO:0098852 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.1 1.5 GO:0005675 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.1 1.1 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.1 0.6 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.1 1.5 GO:0043230 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.1 2.5 GO:0009986 cell surface(GO:0009986)
0.1 0.4 GO:0034703 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.1 0.8 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.1 4.0 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.1 1.7 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.1 0.8 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 1.3 GO:0030125 clathrin vesicle coat(GO:0030125)
0.1 0.6 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.1 0.6 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.1 1.0 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.1 1.2 GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261)
0.1 2.4 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 9.2 GO:0005887 integral component of plasma membrane(GO:0005887)
0.1 4.9 GO:0005770 late endosome(GO:0005770)
0.1 2.2 GO:0044463 cell projection part(GO:0044463)
0.1 0.4 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 3.8 GO:0016592 mediator complex(GO:0016592)
0.1 1.4 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.1 0.6 GO:0031298 replication fork protection complex(GO:0031298)
0.1 0.6 GO:0030014 CCR4-NOT complex(GO:0030014)
0.1 0.4 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.1 0.2 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.1 0.9 GO:0008180 COP9 signalosome(GO:0008180)
0.1 1.6 GO:0009574 preprophase band(GO:0009574)
0.1 0.9 GO:0005682 U5 snRNP(GO:0005682)
0.1 0.3 GO:0031501 mannosyltransferase complex(GO:0031501) dolichol-phosphate-mannose synthase complex(GO:0033185)
0.1 0.6 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.1 2.5 GO:0031903 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.1 0.3 GO:0035102 PRC1 complex(GO:0035102)
0.1 1.1 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.1 0.2 GO:0005846 nuclear cap binding complex(GO:0005846)
0.1 0.4 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.1 0.3 GO:0009569 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.1 1.3 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.1 0.6 GO:0031234 extrinsic component of cytoplasmic side of plasma membrane(GO:0031234)
0.1 0.6 GO:0072546 ER membrane protein complex(GO:0072546)
0.1 0.8 GO:0005769 early endosome(GO:0005769)
0.1 1.2 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.1 1.3 GO:0000145 exocyst(GO:0000145)
0.1 0.4 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.1 1.7 GO:0009504 cell plate(GO:0009504)
0.1 1.6 GO:0090575 RNA polymerase II transcription factor complex(GO:0090575)
0.0 0.2 GO:0043076 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 1.0 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.7 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.1 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.0 0.3 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.8 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 1.2 GO:0031201 SNARE complex(GO:0031201)
0.0 1.9 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.7 GO:0030134 ER to Golgi transport vesicle(GO:0030134)
0.0 2.8 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 1.9 GO:0015629 actin cytoskeleton(GO:0015629)
0.0 0.9 GO:0032040 small-subunit processome(GO:0032040)
0.0 0.4 GO:0042575 DNA polymerase complex(GO:0042575)
0.0 0.5 GO:0035097 histone methyltransferase complex(GO:0035097)
0.0 0.7 GO:0005764 lysosome(GO:0005764)
0.0 21.8 GO:0005783 endoplasmic reticulum(GO:0005783)
0.0 1.0 GO:0000502 proteasome complex(GO:0000502)
0.0 1.2 GO:0005635 nuclear envelope(GO:0005635)
0.0 0.4 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.0 0.7 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.0 1.3 GO:0030964 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.3 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.2 GO:0005685 U1 snRNP(GO:0005685)
0.0 0.4 GO:0055028 cortical microtubule(GO:0055028)
0.0 0.1 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 0.9 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.5 GO:0090406 pollen tube(GO:0090406)
0.0 0.2 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.9 7.6 GO:0046593 mandelonitrile lyase activity(GO:0046593)
1.6 4.9 GO:0008909 isochorismate synthase activity(GO:0008909)
1.5 4.5 GO:1901474 azole transmembrane transporter activity(GO:1901474)
1.3 5.2 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
1.1 10.2 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
1.1 6.5 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
1.1 3.2 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
1.1 3.2 GO:0015119 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
1.0 4.2 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
1.0 4.2 GO:0070401 NADP+ binding(GO:0070401)
1.0 3.9 GO:0004556 alpha-amylase activity(GO:0004556)
0.9 4.3 GO:0008309 double-stranded DNA exodeoxyribonuclease activity(GO:0008309) T/G mismatch-specific endonuclease activity(GO:0043765)
0.8 5.8 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
0.8 2.4 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.8 4.0 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.8 3.2 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.8 2.4 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.8 3.0 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.7 2.9 GO:0047782 coniferin beta-glucosidase activity(GO:0047782)
0.7 2.1 GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.7 3.4 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.7 4.8 GO:0019871 ion channel inhibitor activity(GO:0008200) channel inhibitor activity(GO:0016248) sodium channel regulator activity(GO:0017080) sodium channel inhibitor activity(GO:0019871)
0.7 2.7 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.6 4.5 GO:1990137 plant seed peroxidase activity(GO:1990137)
0.6 2.5 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.6 6.8 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.6 3.0 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.6 1.8 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.6 1.7 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.6 2.8 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.5 3.8 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.5 1.6 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.5 2.6 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.5 3.0 GO:0004126 cytidine deaminase activity(GO:0004126)
0.5 1.5 GO:0016979 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.5 1.4 GO:0031071 cysteine desulfurase activity(GO:0031071)
0.5 3.2 GO:0050551 myrcene synthase activity(GO:0050551)
0.5 3.2 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.4 1.8 GO:0004352 glutamate dehydrogenase (NAD+) activity(GO:0004352)
0.4 1.3 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.4 1.3 GO:0018488 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.4 2.5 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.4 6.1 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.4 1.2 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.4 1.5 GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017)
0.4 4.9 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.4 1.1 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.4 2.2 GO:0015368 calcium:cation antiporter activity(GO:0015368)
0.4 1.1 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.4 4.0 GO:0008199 ferric iron binding(GO:0008199)
0.4 1.1 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.4 2.2 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.3 2.4 GO:0004834 tryptophan synthase activity(GO:0004834)
0.3 12.6 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.3 6.1 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.3 1.0 GO:0004775 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.3 1.6 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
0.3 1.3 GO:0033862 UMP kinase activity(GO:0033862)
0.3 0.9 GO:0003856 3-dehydroquinate synthase activity(GO:0003856)
0.3 0.9 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.3 1.7 GO:0015505 allantoin uptake transmembrane transporter activity(GO:0005274) uracil:cation symporter activity(GO:0015505) uptake transmembrane transporter activity(GO:0015563)
0.3 2.6 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.3 3.4 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.3 2.8 GO:0035198 miRNA binding(GO:0035198)
0.3 0.5 GO:0052578 sesquiterpene synthase activity(GO:0010334) alpha-farnesene synthase activity(GO:0052578)
0.3 2.7 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.3 0.8 GO:0098748 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.3 2.4 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.3 0.8 GO:0051669 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.3 1.0 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.3 1.0 GO:0016649 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.3 3.1 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.3 1.3 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.2 2.5 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.2 0.7 GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity(GO:0004571)
0.2 0.7 GO:0047912 galacturonokinase activity(GO:0047912)
0.2 1.2 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.2 1.7 GO:0008022 protein C-terminus binding(GO:0008022)
0.2 0.5 GO:0030332 cyclin binding(GO:0030332)
0.2 1.4 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.2 2.7 GO:0102391 acyl-CoA ligase activity(GO:0003996) decanoate--CoA ligase activity(GO:0102391)
0.2 0.9 GO:0004300 enoyl-CoA hydratase activity(GO:0004300)
0.2 2.0 GO:0004096 catalase activity(GO:0004096)
0.2 3.2 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.2 0.6 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.2 1.3 GO:0070547 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.2 0.8 GO:0008686 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.2 1.7 GO:0001653 peptide receptor activity(GO:0001653)
0.2 0.8 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.2 4.1 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.2 1.2 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.2 2.9 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.2 0.8 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.2 0.6 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.2 7.0 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.2 2.0 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.2 0.5 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.2 3.6 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.2 3.9 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.2 0.5 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.2 0.8 GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds(GO:0016863)
0.2 1.5 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.2 0.7 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.2 3.1 GO:0016844 strictosidine synthase activity(GO:0016844)
0.2 6.5 GO:0004707 MAP kinase activity(GO:0004707)
0.2 1.9 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.2 2.3 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.2 0.6 GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters(GO:0016892)
0.2 0.3 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.2 1.9 GO:0052742 phosphatidylinositol kinase activity(GO:0052742)
0.2 0.9 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.2 0.8 GO:0008732 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.2 12.1 GO:0019901 protein kinase binding(GO:0019901)
0.1 1.8 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.1 0.4 GO:0036009 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.1 0.4 GO:0032131 alkylated DNA binding(GO:0032131)
0.1 0.6 GO:0070034 telomerase RNA binding(GO:0070034)
0.1 1.1 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 1.4 GO:0015179 L-amino acid transmembrane transporter activity(GO:0015179)
0.1 2.0 GO:0004629 phospholipase C activity(GO:0004629)
0.1 0.7 GO:0004758 serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454)
0.1 2.2 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.1 2.4 GO:0005504 fatty acid binding(GO:0005504)
0.1 0.5 GO:0047714 galactolipase activity(GO:0047714)
0.1 0.6 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.1 0.5 GO:0097157 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)
0.1 0.8 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.1 2.4 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.1 3.9 GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor(GO:0016671)
0.1 0.8 GO:0016004 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.1 3.8 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.3 GO:0050263 uridine nucleosidase activity(GO:0045437) ribosylpyrimidine nucleosidase activity(GO:0050263)
0.1 12.6 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.1 1.4 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 0.4 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 0.5 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 1.4 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.1 0.3 GO:0008428 ribonuclease inhibitor activity(GO:0008428) 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity(GO:0047443)
0.1 0.8 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.1 0.8 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.1 0.6 GO:0032977 membrane insertase activity(GO:0032977)
0.1 2.0 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 1.4 GO:0035064 methylated histone binding(GO:0035064)
0.1 0.4 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.1 0.5 GO:0044390 ubiquitin-like protein conjugating enzyme binding(GO:0044390)
0.1 0.6 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.1 0.3 GO:0052596 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.1 4.8 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.1 0.6 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.1 0.3 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.1 4.4 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.1 0.3 GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity(GO:0004582)
0.1 0.2 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.1 0.3 GO:0050815 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.1 1.0 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.1 0.3 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.1 0.3 GO:0019156 isoamylase activity(GO:0019156)
0.1 0.4 GO:0070139 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.1 1.8 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.1 0.4 GO:0022842 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.1 1.2 GO:0031369 translation initiation factor binding(GO:0031369)
0.1 4.7 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.1 0.1 GO:0008517 folic acid transporter activity(GO:0008517)
0.1 0.5 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.1 0.5 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 10.5 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.1 0.6 GO:0016208 AMP binding(GO:0016208)
0.1 0.3 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 1.7 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.1 0.3 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.1 0.5 GO:0004849 uridine kinase activity(GO:0004849)
0.1 0.5 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 2.7 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.1 0.1 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.1 0.2 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.1 0.4 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.1 0.4 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.4 GO:0004663 Rab geranylgeranyltransferase activity(GO:0004663)
0.1 0.4 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 2.0 GO:0005179 hormone activity(GO:0005179)
0.1 1.0 GO:0019902 phosphatase binding(GO:0019902)
0.1 0.3 GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.1 1.2 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.1 0.7 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.1 6.9 GO:0003779 actin binding(GO:0003779)
0.1 0.5 GO:0016885 CoA carboxylase activity(GO:0016421) ligase activity, forming carbon-carbon bonds(GO:0016885)
0.1 0.4 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 1.2 GO:0008066 glutamate receptor activity(GO:0008066)
0.0 0.2 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 0.3 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.0 6.2 GO:0000989 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 9.1 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.0 0.4 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 1.3 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.8 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.5 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 0.2 GO:0044389 ubiquitin-like protein ligase binding(GO:0044389)
0.0 0.1 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.0 4.9 GO:0008234 cysteine-type peptidase activity(GO:0008234)
0.0 1.4 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.6 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.7 GO:0017025 TBP-class protein binding(GO:0017025)
0.0 1.1 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.9 GO:0016776 phosphotransferase activity, phosphate group as acceptor(GO:0016776)
0.0 1.4 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.6 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.3 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.0 0.8 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.6 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 1.9 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.3 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.0 0.4 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.0 0.2 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.0 0.6 GO:0034594 phosphatidylinositol trisphosphate phosphatase activity(GO:0034594)
0.0 0.1 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity(GO:0010309)
0.0 0.2 GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor(GO:0016647)
0.0 0.2 GO:0000014 single-stranded DNA endodeoxyribonuclease activity(GO:0000014)
0.0 4.0 GO:0019001 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 1.3 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.3 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.0 0.2 GO:0017022 myosin binding(GO:0017022)
0.0 0.2 GO:0004806 triglyceride lipase activity(GO:0004806)
0.0 1.3 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.2 GO:0016151 nickel cation binding(GO:0016151)
0.0 5.9 GO:0005509 calcium ion binding(GO:0005509)
0.0 1.3 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 0.7 GO:0008081 phosphoric diester hydrolase activity(GO:0008081)
0.0 0.1 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.0 0.3 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 2.1 GO:0003924 GTPase activity(GO:0003924)
0.0 0.1 GO:0047958 glycine:2-oxoglutarate aminotransferase activity(GO:0047958)
0.0 0.1 GO:0030275 LRR domain binding(GO:0030275)
0.0 0.8 GO:0008408 3'-5' exonuclease activity(GO:0008408)
0.0 0.2 GO:0000339 RNA cap binding(GO:0000339)
0.0 0.4 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.2 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 2.3 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 1.0 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.6 GO:0016597 amino acid binding(GO:0016597)
0.0 0.3 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.3 GO:0003951 NAD+ kinase activity(GO:0003951)
0.0 0.1 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.6 GO:0005543 phospholipid binding(GO:0005543)
0.0 0.3 GO:0008146 sulfotransferase activity(GO:0008146)
0.0 0.1 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.0 0.1 GO:0032041 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 1.5 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.7 GO:0003743 translation initiation factor activity(GO:0003743)
0.0 5.5 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 0.1 GO:0016755 transferase activity, transferring amino-acyl groups(GO:0016755)
0.0 0.2 GO:0019208 phosphatase regulator activity(GO:0019208) protein phosphatase regulator activity(GO:0019888)
0.0 4.9 GO:0020037 heme binding(GO:0020037)
0.0 0.6 GO:0016298 lipase activity(GO:0016298)
0.0 0.2 GO:0036002 pre-mRNA binding(GO:0036002)
0.0 0.6 GO:0005484 SNAP receptor activity(GO:0005484)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 4.8 PID RAC1 PATHWAY RAC1 signaling pathway
0.4 0.4 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.3 1.0 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.3 0.9 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.3 1.1 PID SMAD2 3NUCLEAR PATHWAY Regulation of nuclear SMAD2/3 signaling
0.3 1.5 PID PLK1 PATHWAY PLK1 signaling events
0.2 0.8 PID ATF2 PATHWAY ATF-2 transcription factor network
0.2 0.6 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.1 0.4 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.4 PID HIF2PATHWAY HIF-2-alpha transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 3.2 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.3 0.9 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 0.9 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.2 0.9 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.2 1.4 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.2 0.9 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.2 0.8 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.2 5.3 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.1 0.3 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.1 0.8 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.4 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.1 0.4 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.1 0.6 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
0.0 0.1 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.0 0.1 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.0 0.4 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.0 0.4 REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS Genes involved in Metabolism of lipids and lipoproteins