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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT3G24050

Z-value: 1.39

Transcription factors associated with AT3G24050

Gene Symbol Gene ID Gene Info
AT3G24050
AT3G24050 GATA transcription factor 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
GATA1arTal_v1_Chr3_+_8685739_8685739-0.671.1e-04Click!

Activity profile of AT3G24050 motif

Sorted Z-values of AT3G24050 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_-_25343369 6.05 AT5G63180.1
AT5G63180
Pectin lyase-like superfamily protein
Chr3_-_11013451 5.54 AT3G29030.1
EXPA5
expansin A5
Chr5_+_26767599 4.99 AT5G67070.1
RALFL34
ralf-like 34
Chr3_+_23345754 4.42 AT3G63200.1
PLP9
PATATIN-like protein 9
Chr5_-_4171954 4.34 AT5G13140.1
AT5G13140
Pollen Ole e 1 allergen and extensin family protein
Chr5_-_753657 3.43 AT5G03170.1
FLA11
FASCICLIN-like arabinogalactan-protein 11
Chr3_+_8586359 3.39 AT3G23805.1
RALFL24
ralf-like 24
Chr1_-_28603932 3.37 AT1G76240.1
AT1G76240
DUF241 domain protein (DUF241)
Chr3_+_3698658 3.34 AT3G11700.1
FLA18
FASCICLIN-like arabinogalactan protein 18 precursor
Chr2_+_19145218 3.27 AT2G46630.1
AT2G46630
serine/arginine repetitive matrix protein
Chr5_-_17581275 3.27 AT5G43750.1
PnsB5
NAD(P)H dehydrogenase 18
Chr2_+_13940187 3.18 AT2G32860.2
AT2G32860.1
BGLU33
beta glucosidase 33
Chr1_-_26515188 3.18 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr1_+_22444307 3.02 AT1G60950.1
FED A
2Fe-2S ferredoxin-like superfamily protein
Chr1_+_23144385 2.97 AT1G62520.1
AT1G62520
sulfated surface-like glycoprotein
Chr1_+_11532199 2.91 AT1G32060.1
PRK
phosphoribulokinase
Chr1_+_3031046 2.91 AT1G09390.1
AT1G09390
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_-_2182538 2.64 AT5G07020.1
AT5G07020
proline-rich family protein
Chr4_+_9803624 2.64 AT4G17600.1
LIL3:1
Chlorophyll A-B binding family protein
Chr4_+_8470179 2.56 AT4G14750.2
AT4G14750.3
AT4G14750.1
IQD19
IQ-domain 19
Chr1_-_4217412 2.53 AT1G12380.1
AT1G12380
hypothetical protein
Chr1_-_6940832 2.52 AT1G20010.1
TUB5
tubulin beta-5 chain
Chr2_+_16869189 2.51 AT2G40400.1
AT2G40400.2
AT2G40400.3
AT2G40400
DUF399 family protein, putative (DUF399 and DUF3411)
Chr1_-_29647691 2.47 AT1G78860.1
AT1G78860
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr1_+_28498821 2.45 AT1G75900.1
AT1G75900
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_-_10304812 2.43 AT2G24230.1
AT2G24230
Leucine-rich repeat protein kinase family protein
Chr4_+_17986384 2.38 AT4G38430.1
ROPGEF1
rho guanyl-nucleotide exchange factor 1
Chr1_-_1307973 2.37 AT1G04680.1
AT1G04680
Pectin lyase-like superfamily protein
Chr3_+_20344785 2.35 AT3G54920.1
PMR6
Pectin lyase-like superfamily protein
Chr1_+_564018 2.34 AT1G02640.1
BXL2
beta-xylosidase 2
Chr4_-_11612903 2.30 AT4G21890.1
AT4G21890
zinc finger MYND domain protein
Chr5_+_4341262 2.28 AT5G13510.1
EMB3136
Ribosomal protein L10 family protein
Chr2_+_19240131 2.27 AT2G46810.3
AT2G46810.2
AT2G46810.4
AT2G46810
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_-_1035969 2.24 AT2G03420.1
AT2G03420
hypothetical protein
Chr3_-_6855513 2.22 AT3G19720.3
AT3G19720.2
AT3G19720.1
ARC5
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_+_26354853 2.13 AT5G65890.2
AT5G65890.3
AT5G65890.1
ACR1
ACT domain repeat 1
Chr5_+_22175461 2.08 AT5G54585.1
AT5G54585
hypothetical protein
Chr1_-_2289336 2.04 AT1G07450.1
AT1G07450
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_6487153 1.99 AT1G18810.1
AT1G18810
phytochrome kinase substrate-like protein
Chr1_+_4157654 1.98 AT1G12244.1
AT1G12244
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr1_-_8310916 1.96 AT1G23390.1
AT1G23390
Kelch repeat-containing F-box family protein
Chr1_+_9191503 1.93 AT1G26600.2
AT1G26600.1
CLE9
CLAVATA3/ESR-RELATED 9
Chr1_+_29871326 1.91 AT1G79420.1
AT1G79420
C-type mannose receptor (DUF620)
Chr5_+_26356126 1.87 AT5G65890.5
ACR1
ACT domain repeat 1
Chr4_+_8520819 1.85 AT4G14890.1
FdC1
2Fe-2S ferredoxin-like superfamily protein
Chr5_+_26355873 1.84 AT5G65890.4
ACR1
ACT domain repeat 1
Chr3_+_7096310 1.82 AT3G20350.1
AT3G20350
actin cytoskeleton-regulatory complex pan-like protein
Chr1_-_21507679 1.79 AT1G58080.1
ATP-PRT1
ATP phosphoribosyl transferase 1
Chr3_-_821652 1.79 AT3G03450.1
RGL2
RGA-like 2
Chr3_-_19897412 1.78 AT3G53680.2
AT3G53680
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Chr3_-_19897955 1.78 AT3G53680.1
AT3G53680
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Chr4_+_10989910 1.73 AT4G20360.1
AT4G20360.2
RABE1b
RAB GTPase homolog E1B
Chr3_+_2126312 1.73 AT3G06740.1
GATA15
GATA transcription factor 15
Chr1_+_3400554 1.73 AT1G10380.2
AT1G10380.1
AT1G10380
Putative membrane lipoprotein
Chr1_+_7680390 1.71 AT1G21880.2
AT1G21880.1
LYM1
lysm domain GPI-anchored protein 1 precursor
Chr5_-_6174944 1.71 AT5G18570.1
EMB269
GTP1/OBG family protein
Chr3_-_3782954 1.70 AT3G11945.2
AT3G11945.1
HST
homogentisate prenyltransferase
Chr3_-_21805335 1.69 AT3G59010.1
PME61
pectin methylesterase 61
Chr3_+_12104312 1.68 AT3G30460.2
AT3G30460.1
AT3G30460
RING/U-box superfamily protein
Chr2_+_417427 1.67 AT2G01910.2
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
Chr2_+_19239694 1.66 AT2G46810.1
AT2G46810
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_+_416021 1.64 AT2G01910.1
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
Chr5_+_19031301 1.57 AT5G46880.1
AT5G46880.3
HB-7
homeobox-7
Chr1_-_28549586 1.56 AT1G76080.1
CDSP32
chloroplastic drought-induced stress protein of 32 kD
Chr4_-_17123855 1.56 AT4G36180.1
AT4G36180
Leucine-rich receptor-like protein kinase family protein
Chr5_-_17635915 1.56 AT5G43870.1
AT5G43870.2
AT5G43870
auxin canalization protein (DUF828)
Chr2_-_3527460 1.56 AT2G07690.2
AT2G07690.1
MCM5
Minichromosome maintenance (MCM2/3/5) family protein
Chr2_+_11595076 1.55 AT2G27130.1
AT2G27130
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_-_12527803 1.55 AT2G29130.1
LAC2
laccase 2
Chr1_-_1611815 1.55 AT1G05470.2
AT1G05470.1
CVP2
DNAse I-like superfamily protein
Chr5_+_25050679 1.51 AT5G62380.2
NAC101
NAC-domain protein 101
Chr4_-_12903151 1.50 AT4G25150.1
AT4G25150
HAD superfamily, subfamily IIIB acid phosphatase
Chr2_+_1238630 1.49 AT2G03955.1
AT2G03955
Cysteine-rich protein
Chr2_+_18718348 1.46 AT2G45420.1
LBD18
LOB domain-containing protein 18
Chr4_+_13985023 1.45 AT4G28190.2
ULT1
Developmental regulator, ULTRAPETALA
Chr4_+_17150740 1.42 AT4G36250.1
ALDH3F1
aldehyde dehydrogenase 3F1
Chr1_-_11015913 1.42 AT1G30930.1
AT1G30930
F-box family protein
Chr3_-_22811024 1.40 AT3G61640.1
AGP20
arabinogalactan protein 20
Chr1_+_26157702 1.39 AT1G69560.2
AT1G69560.1
MYB105
myb domain protein 105
Chr4_+_13984695 1.37 AT4G28190.1
ULT1
Developmental regulator, ULTRAPETALA
Chr5_+_25050152 1.36 AT5G62380.1
NAC101
NAC-domain protein 101
Chr1_-_30186716 1.34 AT1G80280.1
AT1G80280
alpha/beta-Hydrolases superfamily protein
Chr1_-_18484331 1.34 AT1G49920.2
AT1G49920.1
AT1G49920
MuDR family transposase
Chr4_+_553332 1.34 AT4G01335.2
AT4G01335.1
AT4G01335
TATA box-binding protein associated factor RNA polymerase I subunit B-like protein
Chr4_-_8093552 1.33 AT4G14010.1
RALFL32
ralf-like 32
Chr2_+_2924360 1.33 AT2G07050.2
AT2G07050.1
CAS1
cycloartenol synthase 1
Chr3_-_23195917 1.31 AT3G62700.1
ABCC14
multidrug resistance-associated protein 10
Chr2_+_875233 1.31 AT2G03000.1
AT2G03000
RING/U-box superfamily protein
Chr2_+_17381647 1.30 AT2G41690.1
HSFB3
heat shock transcription factor B3
Chr5_-_1207679 1.30 AT5G04310.2
AT5G04310.3
AT5G04310
Pectin lyase-like superfamily protein
Chr5_+_21039533 1.28 AT5G51790.3
AT5G51790.2
AT5G51790.1
AT5G51790.4
AT5G51790
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_+_16118830 1.27 AT4G33520.2
AT4G33520.1
AT4G33520.3
AT4G33520.4
PAA1
P-type ATP-ase 1
Chr3_-_7839467 1.27 AT3G22210.1
AT3G22210
transmembrane protein
Chr3_+_2637592 1.26 AT3G08680.1
AT3G08680
Leucine-rich repeat protein kinase family protein
Chr2_+_7994011 1.25 AT2G18420.2
AT2G18420
Gibberellin-regulated family protein
Chr2_+_18977344 1.25 AT2G46210.1
SLD2
Fatty acid/sphingolipid desaturase
Chr1_+_10582060 1.24 AT1G30110.1
NUDX25
nudix hydrolase homolog 25
Chr3_+_2637432 1.24 AT3G08680.2
AT3G08680
Leucine-rich repeat protein kinase family protein
Chr5_+_6290358 1.24 AT5G18860.1
AT5G18860.2
NSH3
inosine-uridine preferring nucleoside hydrolase family protein
Chr5_+_22721373 1.24 AT5G56120.1
AT5G56120
RNA polymerase II elongation factor
Chr1_-_24929054 1.23 AT1G66810.3
AT1G66810.2
AT1G66810
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr1_+_10581735 1.23 AT1G30110.2
NUDX25
nudix hydrolase homolog 25
Chr5_-_23678002 1.23 AT5G58580.1
ATL63
TOXICOS EN LEVADURA 63
Chr5_+_19030844 1.22 AT5G46880.2
HB-7
homeobox-7
Chr5_+_19570238 1.17 AT5G48300.1
ADG1
ADP glucose pyrophosphorylase 1
Chr2_+_7993801 1.14 AT2G18420.1
AT2G18420
Gibberellin-regulated family protein
Chr3_+_16968423 1.13 AT3G46200.2
AT3G46200.3
AT3G46200.1
AT3G46200.4
NUDT9
nudix hydrolase homolog 9
Chr3_-_411873 1.13 AT3G02210.1
COBL1
COBRA-like protein 1 precursor
Chr5_+_4658441 1.13 AT5G14450.1
AT5G14450
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_+_11014789 1.11 AT2G25820.1
ESE2
Integrase-type DNA-binding superfamily protein
Chr2_-_11968712 1.10 AT2G28085.1
AT2G28085
SAUR-like auxin-responsive protein family
Chr2_-_8000825 1.10 AT2G18450.1
SDH1-2
succinate dehydrogenase 1-2
Chr5_-_11184514 1.09 AT5G29550.1
AT5G29550

Chr1_-_3655685 1.09 AT1G10930.1
RECQ4A
DNA helicase (RECQl4A)
Chr1_+_5448611 1.09 AT1G15830.1
AT1G15830.3
AT1G15830
hypothetical protein
Chr2_-_8194396 1.09 AT2G18910.1
AT2G18910
hydroxyproline-rich glycoprotein family protein
Chr3_+_16969245 1.09 AT3G46200.5
AT3G46200.6
NUDT9
nudix hydrolase homolog 9
Chr4_-_10955584 1.08 AT4G20290.1
AT4G20290
transmembrane protein
Chr1_-_4651549 1.08 AT1G13600.1
bZIP58
basic leucine-zipper 58
Chr5_-_6438242 1.08 AT5G19165.1
AT5G19165

Chr3_-_12666444 1.07 AT3G31023.1
AT3G31023

Chr5_-_10839826 1.06 AT5G28823.1
AT5G28823
hypothetical protein
Chr1_-_24928803 1.06 AT1G66810.1
AT1G66810
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr5_-_1207946 1.05 AT5G04310.1
AT5G04310
Pectin lyase-like superfamily protein
Chr3_+_8761419 1.04 AT3G24220.1
NCED6
nine-cis-epoxycarotenoid dioxygenase 6
Chr1_-_20703460 1.04 AT1G55440.1
AT1G55440
Cysteine/Histidine-rich C1 domain family protein
Chr1_-_11590035 1.04 AT1G32180.2
CSLD6
cellulose synthase-like D6
Chr1_-_11589651 1.04 AT1G32180.1
CSLD6
cellulose synthase-like D6
Chr4_-_5401591 1.03 AT4G08490.1
AT4G08490

Chr5_-_24779945 1.03 AT5G61660.1
AT5G61660
glycine-rich protein
Chr5_-_3334913 1.03 AT5G10550.1
GTE2
global transcription factor group E2
Chr5_-_23890431 1.02 AT5G59200.1
OTP80
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_25678468 1.02 AT1G68470.1
AT1G68470
Exostosin family protein
Chr4_-_18547556 1.01 AT4G40000.1
AT4G40000
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_16908007 1.01 AT5G42280.1
AT5G42280.2
AT5G42280
Cysteine/Histidine-rich C1 domain family protein
Chr5_+_1624563 1.00 AT5G05490.2
SYN1
Rad21/Rec8-like family protein
Chr5_+_24134225 1.00 AT5G59930.2
AT5G59930.1
AT5G59930
Cysteine/Histidine-rich C1 domain family protein
Chr1_+_18742027 1.00 AT1G50610.1
PRK5
Leucine-rich repeat protein kinase family protein
Chr5_+_1624206 1.00 AT5G05490.1
SYN1
Rad21/Rec8-like family protein
Chr3_+_23315506 0.99 AT3G63095.1
AT3G63095
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_7930657 0.99 AT1G22460.1
AT1G22460
O-fucosyltransferase family protein
Chr5_-_19447866 0.99 AT5G48000.1
CYP708A2
cytochrome P450, family 708, subfamily A, polypeptide 2
Chr2_-_14965438 0.98 AT2G35620.1
AT2G35620.3
AT2G35620.2
FEI2
Leucine-rich repeat protein kinase family protein
Chr2_+_15847450 0.98 AT2G37820.1
AT2G37820
Cysteine/Histidine-rich C1 domain family protein
Chr1_+_8885020 0.97 AT1G25340.1
MYB116
myb domain protein 116
Chr1_+_8885210 0.97 AT1G25340.2
AT1G25340.3
MYB116
myb domain protein 116
Chr3_-_10628201 0.97 AT3G28380.1
ABCB17
P-glycoprotein 17
Chr1_+_5448060 0.97 AT1G15830.2
AT1G15830
hypothetical protein
Chr5_-_2378824 0.97 AT5G07510.2
AT5G07510.1
AT5G07510.3
GRP14
glycine-rich protein 14
Chr1_-_22885052 0.97 AT1G61900.3
AT1G61900.2
AT1G61900.1
AT1G61900
hypothetical protein
Chr3_-_17902872 0.96 AT3G48344.1
AT3G48344
hypothetical protein
Chr4_+_11352958 0.96 AT4G21340.1
B70
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_+_11211244 0.96 AT4G20960.1
PyrD
Cytidine/deoxycytidylate deaminase family protein
Chr4_-_18546473 0.96 AT4G40000.2
AT4G40000
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_2417800 0.94 AT4G04750.3
AT4G04750.2
AT4G04750.1
AT4G04750
Major facilitator superfamily protein
Chr5_-_7445400 0.94 AT5G22460.2
AT5G22460
alpha/beta-Hydrolases superfamily protein
Chr1_-_27265806 0.94 AT1G72430.1
AT1G72430
SAUR-like auxin-responsive protein family
Chr3_+_17183042 0.94 AT3G46640.1
AT3G46640.3
AT3G46640.2
PCL1
Homeodomain-like superfamily protein
Chr2_-_14644355 0.93 AT2G34710.1
PHB
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Chr1_+_4310969 0.92 AT1G12663.1
AT1G12663
thionin-like protein
Chr5_-_19447149 0.92 AT5G48000.7
AT5G48000.4
AT5G48000.2
AT5G48000.3
AT5G48000.5
AT5G48000.6
CYP708A2
cytochrome P450, family 708, subfamily A, polypeptide 2
Chr5_-_595056 0.91 AT5G02640.1
AT5G02640
hypothetical protein
Chr2_-_16725774 0.91 AT2G40050.2
AT2G40050.1
AT2G40050
Cysteine/Histidine-rich C1 domain family protein
Chr2_+_17963747 0.91 AT2G43220.1
AT2G43220
Cysteine/Histidine-rich C1 domain family protein
Chr1_+_2105048 0.91 AT1G06850.1
AT1G06850.2
bZIP52
basic leucine-zipper 52
Chr2_+_13515199 0.90 AT2G31780.1
ARI11
RING/U-box superfamily protein
Chr5_-_13740702 0.89 AT5G35555.1
AT5G35555

Chr2_-_14320555 0.89 AT2G33847.2
AT2G33847
hypothetical protein
Chr3_-_16253535 0.89 AT3G44710.1
AT3G44710
transmembrane protein, putative (DUF247)
Chr4_+_10211577 0.89 AT4G18510.1
CLE2
CLAVATA3/ESR-related 2
Chr5_-_7445573 0.89 AT5G22460.3
AT5G22460.1
AT5G22460
alpha/beta-Hydrolases superfamily protein
Chr2_-_14320714 0.89 AT2G33847.1
AT2G33847
hypothetical protein
Chr5_+_9014082 0.89 AT5G25850.1
AT5G25850
F-box/RNI-like/FBD-like domains-containing protein
Chr5_+_4541780 0.88 AT5G14070.1
ROXY2
Thioredoxin superfamily protein
Chr1_-_29671219 0.88 AT1G78915.1
AT1G78915.2
AT1G78915.3
AT1G78915
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_-_14965207 0.87 AT2G35620.4
FEI2
Leucine-rich repeat protein kinase family protein
Chr3_+_21752533 0.86 AT3G58820.1
AT3G58820
F-box/RNI-like superfamily protein
Chr5_+_25836514 0.86 AT5G64640.1
AT5G64640
Plant invertase/pectin methylesterase inhibitor superfamily
Chr3_+_3661164 0.86 AT3G11590.2
AT3G11590
golgin family A protein
Chr1_-_12313518 0.85 AT1G33900.1
AT1G33900
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_-_30260732 0.85 AT1G80480.1
PTAC17
plastid transcriptionally active 17
Chr5_-_2908658 0.85 AT5G09360.1
LAC14
laccase 14
Chr3_-_4250703 0.85 AT3G13220.1
ABCG26
ABC-2 type transporter family protein
Chr5_-_22921139 0.84 AT5G56620.1
NAC099
NAC domain containing protein 99
Chr5_-_24489778 0.84 AT5G60880.2
AT5G60880.1
BASL
breaking of asymmetry in the stomatal lineage
Chr2_+_9020944 0.84 AT2G21010.1
AT2G21010
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr2_-_19650287 0.83 AT2G48030.1
AT2G48030.2
AT2G48030
DNAse I-like superfamily protein
Chr5_-_14117927 0.83 AT5G35965.1
AT5G35965

Chr3_-_10587759 0.83 AT3G28330.1
AT3G28330
F-box family protein-like protein
Chr4_-_14740742 0.82 AT4G30140.1
CDEF1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_7227566 0.82 AT1G20795.1
AT1G20795
F-box family protein
Chr4_+_5659793 0.82 AT4G08867.1
AT4G08867
hypothetical protein
Chr5_-_22921499 0.82 AT5G56620.3
AT5G56620.2
NAC099
NAC domain containing protein 99
Chr4_-_53449 0.81 AT4G00140.1
EDA34
Calcium-binding EF-hand family protein
Chr5_-_10578143 0.81 AT5G28580.2
AT5G28580

Chr3_-_4799612 0.81 AT3G14370.1
WAG2
Protein kinase superfamily protein
Chr3_-_4227528 0.80 AT3G13140.1
AT3G13140
hydroxyproline-rich glycoprotein family protein
Chr4_-_3958339 0.80 AT4G06702.1
AT4G06702

Chr3_+_3660298 0.80 AT3G11590.1
AT3G11590
golgin family A protein
Chr3_+_17256338 0.80 AT3G46850.1
AT3G46850
Subtilase family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G24050

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 2.9 GO:0090058 metaxylem development(GO:0090058)
0.7 2.2 GO:0071242 cellular response to ammonium ion(GO:0071242)
0.7 2.6 GO:0033306 phytol metabolic process(GO:0033306)
0.6 2.5 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.6 2.8 GO:0010080 regulation of floral meristem growth(GO:0010080) inflorescence meristem growth(GO:0010450)
0.6 3.3 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.5 2.0 GO:0090172 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.5 1.9 GO:0080003 thalianol metabolic process(GO:0080003)
0.4 3.4 GO:0009643 photosynthetic acclimation(GO:0009643)
0.4 1.7 GO:1990428 miRNA transport(GO:1990428)
0.4 1.2 GO:0006148 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.4 2.4 GO:0051098 regulation of binding(GO:0051098)
0.4 2.3 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.3 0.8 GO:0030638 polyketide metabolic process(GO:0030638)
0.3 1.3 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.3 1.3 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.2 1.5 GO:0010067 procambium histogenesis(GO:0010067) inositol trisphosphate metabolic process(GO:0032957)
0.2 2.9 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.2 7.4 GO:0080022 primary root development(GO:0080022)
0.2 12.3 GO:0007267 cell-cell signaling(GO:0007267)
0.2 1.6 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.2 2.8 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.2 2.2 GO:0016559 peroxisome fission(GO:0016559)
0.2 0.9 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.2 1.2 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.2 1.9 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.2 13.1 GO:0045490 pectin catabolic process(GO:0045490)
0.1 0.7 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.1 0.6 GO:0019388 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.1 0.4 GO:2001009 regulation of plant-type cell wall cellulose biosynthetic process(GO:2001009)
0.1 1.1 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.1 1.4 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.1 1.1 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.1 0.8 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 0.5 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.1 1.2 GO:1903426 regulation of reactive oxygen species biosynthetic process(GO:1903426)
0.1 1.8 GO:0000105 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 1.0 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 1.8 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.1 0.8 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.1 1.2 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.1 0.4 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.1 2.6 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 0.6 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 1.1 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.1 1.0 GO:0006771 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.1 0.9 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.1 2.0 GO:0009638 phototropism(GO:0009638)
0.1 0.3 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.1 1.4 GO:0010089 xylem development(GO:0010089)
0.1 0.6 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 4.5 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.1 2.8 GO:0016145 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 1.0 GO:1900865 chloroplast RNA modification(GO:1900865)
0.1 0.5 GO:0010117 photoprotection(GO:0010117)
0.0 0.4 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.0 1.3 GO:0070417 cellular response to cold(GO:0070417)
0.0 0.6 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.1 GO:0019320 hexose catabolic process(GO:0019320)
0.0 0.3 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.0 0.8 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.0 0.5 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 1.4 GO:0010197 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 0.7 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 1.0 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.5 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 0.6 GO:0046620 regulation of organ growth(GO:0046620)
0.0 1.8 GO:0009644 response to high light intensity(GO:0009644)
0.0 1.0 GO:0019915 lipid storage(GO:0019915)
0.0 0.1 GO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.0 0.3 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.0 1.0 GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032436) positive regulation of proteasomal protein catabolic process(GO:1901800)
0.0 0.5 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.0 1.3 GO:0048825 cotyledon development(GO:0048825)
0.0 0.8 GO:0010223 secondary shoot formation(GO:0010223) shoot axis formation(GO:0010346)
0.0 1.8 GO:0006885 regulation of pH(GO:0006885)
0.0 1.7 GO:0048653 anther development(GO:0048653)
0.0 1.0 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 1.6 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.3 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.6 GO:0009686 gibberellin biosynthetic process(GO:0009686)
0.0 0.2 GO:0015804 neutral amino acid transport(GO:0015804)
0.0 0.2 GO:0030307 positive regulation of cell growth(GO:0030307)
0.0 2.0 GO:0000226 microtubule cytoskeleton organization(GO:0000226)
0.0 0.5 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.0 GO:0030893 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.2 3.3 GO:0009531 secondary cell wall(GO:0009531)
0.2 2.5 GO:0045298 tubulin complex(GO:0045298)
0.2 1.6 GO:0042555 MCM complex(GO:0042555)
0.1 3.3 GO:0009574 preprophase band(GO:0009574)
0.1 2.4 GO:0016324 apical plasma membrane(GO:0016324)
0.1 1.1 GO:0045283 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.1 1.3 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.1 2.9 GO:0010319 stromule(GO:0010319)
0.1 0.8 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.1 2.8 GO:0005811 lipid particle(GO:0005811)
0.1 14.1 GO:0048046 apoplast(GO:0048046)
0.0 0.7 GO:0035838 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 0.9 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.4 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 0.7 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 10.1 GO:0031225 anchored component of membrane(GO:0031225)
0.0 1.2 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.0 2.0 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 0.1 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.0 8.9 GO:0009535 chloroplast thylakoid membrane(GO:0009535)
0.0 1.7 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 4.9 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.6 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 0.4 GO:0042651 thylakoid membrane(GO:0042651)
0.0 0.8 GO:0090406 pollen tube(GO:0090406)
0.0 1.6 GO:0009534 chloroplast thylakoid(GO:0009534)
0.0 2.4 GO:0015934 large ribosomal subunit(GO:0015934)
0.0 1.9 GO:0044215 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 1.3 GO:0099503 secretory vesicle(GO:0099503)
0.0 5.0 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.6 GO:0005770 late endosome(GO:0005770)
0.0 0.8 GO:0005635 nuclear envelope(GO:0005635)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.7 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
0.5 12.9 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.5 2.5 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.4 1.3 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.3 1.2 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.3 2.6 GO:0043495 protein anchor(GO:0043495)
0.3 1.4 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.3 9.5 GO:0005179 hormone activity(GO:0005179)
0.3 0.8 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.3 1.3 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.2 0.7 GO:0004651 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192)
0.2 1.5 GO:0046030 inositol trisphosphate phosphatase activity(GO:0046030)
0.2 1.6 GO:0004003 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.2 0.6 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.2 1.0 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.2 1.1 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.2 1.8 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.2 5.8 GO:0016597 amino acid binding(GO:0016597)
0.1 1.0 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 1.2 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.1 2.4 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 2.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 1.1 GO:0009378 four-way junction helicase activity(GO:0009378)
0.1 0.8 GO:0019158 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 1.9 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.1 0.5 GO:0015105 arsenite transmembrane transporter activity(GO:0015105)
0.1 2.6 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.1 0.6 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.1 1.3 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 0.2 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.1 0.2 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.0 0.6 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 2.5 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 1.1 GO:0010333 terpene synthase activity(GO:0010333)
0.0 2.5 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.7 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.4 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 5.5 GO:0008017 microtubule binding(GO:0008017)
0.0 0.3 GO:0017022 myosin binding(GO:0017022)
0.0 0.5 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 1.0 GO:0031624 ubiquitin conjugating enzyme binding(GO:0031624)
0.0 1.7 GO:0030247 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 0.4 GO:0019903 protein phosphatase binding(GO:0019903)
0.0 0.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 1.2 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 2.6 GO:0001012 RNA polymerase II regulatory region sequence-specific DNA binding(GO:0000977) RNA polymerase II regulatory region DNA binding(GO:0001012)
0.0 0.1 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.0 1.2 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 1.1 GO:0005451 monovalent cation:proton antiporter activity(GO:0005451)
0.0 0.4 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.7 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.9 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 5.4 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 0.2 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.0 0.4 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 1.0 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 3.1 GO:0042803 protein homodimerization activity(GO:0042803)
0.0 0.3 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 1.7 GO:0009055 electron carrier activity(GO:0009055)
0.0 2.1 GO:0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances(GO:0016820) ATPase activity, coupled to transmembrane movement of substances(GO:0042626) ATPase activity, coupled to movement of substances(GO:0043492)
0.0 0.8 GO:0016763 transferase activity, transferring pentosyl groups(GO:0016763)
0.0 0.5 GO:0071949 FAD binding(GO:0071949)
0.0 0.8 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 1.2 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.4 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.2 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.9 GO:0015144 carbohydrate transmembrane transporter activity(GO:0015144)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.0 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.2 1.6 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA