Project
GSE43616: Time-course of wild-type Arabidopsis leaf
Navigation
Downloads
Results for AT3G10800
Z-value: 2.03
Transcription factors associated with AT3G10800
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
AT3G10800
|
AT3G10800 | Basic-leucine zipper (bZIP) transcription factor family protein |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| BZIP28 | arTal_v1_Chr3_+_3379168_3379168 | 0.92 | 6.3e-12 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| arTal_v1_Chr2_+_10906460_10906460 Show fit | 13.75 |
AT2G25625.2
|
histone deacetylase-like protein |
|
| arTal_v1_Chr3_+_5234457_5234457 Show fit | 13.40 |
AT3G15500.1
|
NAC domain containing protein 3 |
|
| arTal_v1_Chr2_+_10906215_10906215 Show fit | 13.31 |
AT2G25625.1
|
histone deacetylase-like protein |
|
| arTal_v1_Chr1_+_5290747_5290747 Show fit | 12.51 |
AT1G15380.2
|
Lactoylglutathione lyase / glyoxalase I family protein |
|
| arTal_v1_Chr1_+_5290582_5290582 Show fit | 12.23 |
AT1G15380.1
|
Lactoylglutathione lyase / glyoxalase I family protein |
|
| arTal_v1_Chr5_-_4183354_4183354 Show fit | 11.17 |
AT5G13170.1
|
senescence-associated gene 29 |
|
| arTal_v1_Chr1_-_10356482_10356482 Show fit | 11.14 |
AT1G29640.1
|
senescence regulator (Protein of unknown function, DUF584) |
|
| arTal_v1_Chr2_-_14146471_14146555 Show fit | 10.78 |
AT2G33380.2
AT2G33380.1 |
Caleosin-related family protein |
|
| arTal_v1_Chr1_+_25426234_25426234 Show fit | 10.66 |
AT1G67810.1
|
sulfur E2 |
|
| arTal_v1_Chr3_-_1055196_1055196 Show fit | 10.58 |
AT3G04060.1
|
NAC domain containing protein 46 |
Network of associatons between targets according to the STRING database.
First level regulatory network of AT3G10800
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.0 | 30.4 | GO:2000031 | regulation of salicylic acid mediated signaling pathway(GO:2000031) |
| 0.1 | 28.8 | GO:0051603 | proteolysis involved in cellular protein catabolic process(GO:0051603) |
| 0.1 | 28.7 | GO:0071456 | cellular response to hypoxia(GO:0071456) |
| 0.2 | 26.7 | GO:0007568 | aging(GO:0007568) |
| 0.4 | 23.3 | GO:0009631 | cold acclimation(GO:0009631) |
| 0.1 | 18.4 | GO:0050832 | defense response to fungus(GO:0050832) |
| 0.2 | 18.2 | GO:0010431 | seed maturation(GO:0010431) |
| 3.8 | 15.3 | GO:1902457 | negative regulation of stomatal opening(GO:1902457) |
| 0.2 | 14.3 | GO:0009615 | response to virus(GO:0009615) |
| 3.5 | 14.1 | GO:0042759 | long-chain fatty acid biosynthetic process(GO:0042759) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 98.0 | GO:0005634 | nucleus(GO:0005634) |
| 0.0 | 33.3 | GO:0005739 | mitochondrion(GO:0005739) |
| 0.1 | 30.3 | GO:0031225 | anchored component of membrane(GO:0031225) |
| 0.1 | 24.5 | GO:0016021 | integral component of membrane(GO:0016021) |
| 0.5 | 23.6 | GO:0000323 | lytic vacuole(GO:0000323) |
| 0.3 | 19.1 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
| 0.1 | 15.2 | GO:0005789 | endoplasmic reticulum membrane(GO:0005789) |
| 0.2 | 13.4 | GO:0000139 | Golgi membrane(GO:0000139) |
| 0.7 | 9.8 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
| 0.6 | 9.7 | GO:0031970 | organelle envelope lumen(GO:0031970) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 54.9 | GO:0000976 | regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212) |
| 0.4 | 25.7 | GO:0004197 | cysteine-type endopeptidase activity(GO:0004197) |
| 1.3 | 16.6 | GO:0032440 | 2-alkenal reductase [NAD(P)] activity(GO:0032440) |
| 0.1 | 14.2 | GO:0008047 | enzyme activator activity(GO:0008047) |
| 1.2 | 13.3 | GO:0031127 | galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127) |
| 1.6 | 13.0 | GO:0004506 | squalene monooxygenase activity(GO:0004506) |
| 0.1 | 12.9 | GO:0004175 | endopeptidase activity(GO:0004175) |
| 0.3 | 11.9 | GO:0000156 | phosphorelay response regulator activity(GO:0000156) |
| 0.8 | 11.7 | GO:0004709 | MAP kinase kinase kinase activity(GO:0004709) |
| 0.3 | 11.7 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.6 | 4.9 | PID IL12 2PATHWAY | IL12-mediated signaling events |
| 0.5 | 3.4 | PID MTOR 4PATHWAY | mTOR signaling pathway |
| 0.3 | 2.3 | PID P73PATHWAY | p73 transcription factor network |
| 0.1 | 1.1 | PID ATR PATHWAY | ATR signaling pathway |
| 0.2 | 1.0 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.5 | 4.5 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
| 0.7 | 4.3 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
| 0.6 | 2.3 | REACTOME INTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Intrinsic Pathway for Apoptosis |
| 0.1 | 1.5 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
| 0.1 | 1.1 | REACTOME POL SWITCHING | Genes involved in Polymerase switching |
| 0.3 | 1.0 | REACTOME GLUCONEOGENESIS | Genes involved in Gluconeogenesis |
| 0.1 | 0.9 | REACTOME INNATE IMMUNE SYSTEM | Genes involved in Innate Immune System |
| 0.2 | 0.8 | REACTOME PEROXISOMAL LIPID METABOLISM | Genes involved in Peroxisomal lipid metabolism |