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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT3G03200

Z-value: 0.97

Transcription factors associated with AT3G03200

Gene Symbol Gene ID Gene Info
AT3G03200
AT3G03200 NAC domain containing protein 45

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NAC045arTal_v1_Chr3_-_738629_7386290.183.5e-01Click!

Activity profile of AT3G03200 motif

Sorted Z-values of AT3G03200 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_16950705 4.39 AT2G40610.1
EXPA8
expansin A8
Chr1_-_29635931 4.29 AT1G78820.1
AT1G78820
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr5_-_15378416 4.28 AT5G38410.3
AT5G38410.2
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr5_-_15378642 4.27 AT5G38410.1
RBCS3B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr3_+_5556710 3.85 AT3G16370.1
AT3G16370
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_4090857 3.78 AT1G12090.1
ELP
extensin-like protein
Chr4_+_18291218 3.55 AT4G39330.1
AT4G39330.2
CAD9
cinnamyl alcohol dehydrogenase 9
Chr4_-_7493080 3.51 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
Chr5_+_4757856 3.47 AT5G14740.3
AT5G14740.6
AT5G14740.1
AT5G14740.7
AT5G14740.8
AT5G14740.2
AT5G14740.4
AT5G14740.5
CA2
carbonic anhydrase 2
Chr1_-_4394343 3.38 AT1G12900.3
AT1G12900.4
AT1G12900.1
AT1G12900.2
AT1G12900.5
GAPA-2
glyceraldehyde 3-phosphate dehydrogenase A subunit 2
Chr1_+_10371675 3.28 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_27338034 3.23 AT1G72600.2
AT1G72600.1
AT1G72600
hydroxyproline-rich glycoprotein family protein
Chr1_-_10475969 3.17 AT1G29920.1
CAB2
chlorophyll A/B-binding protein 2
Chr5_+_4758921 3.13 AT5G14740.9
CA2
carbonic anhydrase 2
Chr1_-_59215 3.11 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
Chr3_+_17228642 3.11 AT3G46780.1
PTAC16
plastid transcriptionally active 16
Chr1_-_7531108 3.06 AT1G21500.1
AT1G21500
hypothetical protein
Chr4_+_2449434 3.04 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
Chr1_-_25049424 3.03 AT1G67090.2
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
Chr1_-_25049667 3.03 AT1G67090.1
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
Chr4_-_176870 3.01 AT4G00400.1
GPAT8
glycerol-3-phosphate acyltransferase 8
Chr5_-_6976036 3.01 AT5G20630.1
GER3
germin 3
Chr2_+_8940833 2.96 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
Chr3_-_9492655 2.92 AT3G25920.1
RPL15
ribosomal protein L15
Chr2_+_16476198 2.88 AT2G39470.1
AT2G39470.2
AT2G39470.3
PnsL1
PsbP-like protein 2
Chr4_+_12660687 2.87 AT4G24510.1
CER2
HXXXD-type acyl-transferase family protein
Chr1_-_27340044 2.85 AT1G72610.1
GER1
germin-like protein 1
Chr5_+_22038165 2.80 AT5G54270.1
LHCB3
light-harvesting chlorophyll B-binding protein 3
Chr4_+_14215473 2.78 AT4G28780.1
AT4G28780
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_4001113 2.78 AT1G11860.3
AT1G11860.1
AT1G11860.2
AT1G11860
Glycine cleavage T-protein family
Chr5_-_4171954 2.75 AT5G13140.1
AT5G13140
Pollen Ole e 1 allergen and extensin family protein
Chr1_+_6409655 2.71 AT1G18620.3
AT1G18620.1
AT1G18620.4
TRM3
LONGIFOLIA protein
Chr5_-_18026077 2.67 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr3_+_251868 2.62 AT3G01680.1
SEOR1
sieve element occlusion amino-terminus protein
Chr1_-_6999839 2.57 AT1G20190.1
EXPA11
expansin 11
Chr1_-_11740399 2.56 AT1G32470.1
AT1G32470
Single hybrid motif superfamily protein
Chr1_-_28423520 2.56 AT1G75690.1
LQY1
DnaJ/Hsp40 cysteine-rich domain superfamily protein
Chr1_-_4530222 2.54 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr3_-_6882235 2.51 AT3G19820.3
AT3G19820.1
AT3G19820.2
DWF1
cell elongation protein / DWARF1 / DIMINUTO (DIM)
Chr2_+_1676999 2.50 AT2G04780.2
FLA7
FASCICLIN-like arabinoogalactan 7
Chr3_-_977474 2.50 AT3G03820.1
SAUR29
SAUR-like auxin-responsive protein family
Chr1_+_19454798 2.49 AT1G52230.1
PSAH2
photosystem I subunit H2
Chr1_+_26141726 2.49 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
EXPA1
expansin A1
Chr5_+_21020014 2.49 AT5G51750.1
SBT1.3
subtilase 1.3
Chr1_-_21614169 2.48 AT1G58270.1
ZW9
TRAF-like family protein
Chr1_+_17918207 2.48 AT1G48480.1
RKL1
receptor-like kinase 1
Chr4_+_620691 2.46 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_+_7252111 2.45 AT1G20850.1
XCP2
xylem cysteine peptidase 2
Chr2_+_1676717 2.44 AT2G04780.1
FLA7
FASCICLIN-like arabinoogalactan 7
Chr3_-_23328789 2.44 AT3G63140.1
CSP41A
chloroplast stem-loop binding protein of 41 kDa
Chr1_+_11532199 2.43 AT1G32060.1
PRK
phosphoribulokinase
Chr3_+_247192 2.42 AT3G01670.2
AT3G01670.1
SEOa
sieve element occlusion protein
Chr4_-_17355891 2.42 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
Chr2_-_15483706 2.41 AT2G36885.2
AT2G36885.1
AT2G36885
translation initiation factor
Chr4_-_16583075 2.39 AT4G34760.1
AT4G34760
SAUR-like auxin-responsive protein family
Chr1_+_5058583 2.39 AT1G14700.4
AT1G14700.1
AT1G14700.3
AT1G14700.2
PAP3
purple acid phosphatase 3
Chr1_-_6999523 2.37 AT1G20190.2
EXPA11
expansin 11
Chr4_+_14517393 2.36 AT4G29610.1
AT4G29610
Cytidine/deoxycytidylate deaminase family protein
Chr5_+_5983683 2.36 AT5G18080.1
SAUR24
SAUR-like auxin-responsive protein family
Chr1_+_6410947 2.36 AT1G18620.5
TRM3
LONGIFOLIA protein
Chr4_+_17243583 2.35 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
Chr4_-_12772438 2.35 AT4G24780.1
AT4G24780.2
AT4G24780
Pectin lyase-like superfamily protein
Chr2_+_19243348 2.34 AT2G46820.1
AT2G46820.2
PSI-P
photosystem I P subunit
Chr4_+_11202728 2.33 AT4G20940.1
GHR1
Leucine-rich receptor-like protein kinase family protein
Chr1_-_84864 2.32 AT1G01190.1
AT1G01190.2
CYP78A8
cytochrome P450, family 78, subfamily A, polypeptide 8
Chr4_+_13725546 2.32 AT4G27440.2
AT4G27440.1
PORB
protochlorophyllide oxidoreductase B
Chr5_-_1293723 2.32 AT5G04530.1
KCS19
3-ketoacyl-CoA synthase 19
Chr1_+_4868346 2.31 AT1G14250.1
AT1G14250
GDA1/CD39 nucleoside phosphatase family protein
Chr4_-_8307934 2.31 AT4G14440.1
HCD1
3-hydroxyacyl-CoA dehydratase 1
Chr1_+_6410033 2.30 AT1G18620.2
TRM3
LONGIFOLIA protein
Chr5_-_17581275 2.28 AT5G43750.1
PnsB5
NAD(P)H dehydrogenase 18
Chr5_-_6842946 2.27 AT5G20270.1
HHP1
heptahelical transmembrane protein1
Chr2_-_7954680 2.27 AT2G18300.1
AT2G18300.3
AT2G18300.2
HBI1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_-_18370698 2.26 AT4G39510.1
CYP96A12
cytochrome P450, family 96, subfamily A, polypeptide 12
Chr4_+_493546 2.25 AT4G01150.1
AT4G01150.2
AT4G01150
CURVATURE THYLAKOID 1A-like protein
Chr2_-_11727654 2.24 AT2G27420.1
AT2G27420
Cysteine proteinases superfamily protein
Chr3_+_19421397 2.23 AT3G52380.1
CP33
chloroplast RNA-binding protein 33
Chr1_+_3664187 2.23 AT1G10960.1
FD1
ferredoxin 1
Chr3_+_6180621 2.22 AT3G18050.1
AT3G18050
GPI-anchored protein
Chr5_-_5966785 2.22 AT5G18020.1
SAUR20
SAUR-like auxin-responsive protein family
Chr1_-_6319427 2.22 AT1G18360.1
AT1G18360
alpha/beta-Hydrolases superfamily protein
Chr1_+_10477885 2.21 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
Chr3_+_8586359 2.20 AT3G23805.1
RALFL24
ralf-like 24
Chr2_-_19563960 2.18 AT2G47750.1
GH3.9
putative indole-3-acetic acid-amido synthetase GH3.9
Chr3_-_15617149 2.18 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_-_12173951 2.18 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
BGAL8
beta-galactosidase 8
Chr1_+_16871696 2.18 AT1G44575.2
NPQ4
Chlorophyll A-B binding family protein
Chr5_-_18371021 2.17 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr1_+_16871511 2.17 AT1G44575.3
NPQ4
Chlorophyll A-B binding family protein
Chr3_-_15617309 2.16 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_10321011 2.16 AT1G29500.1
AT1G29500
SAUR-like auxin-responsive protein family
Chr1_+_16870221 2.16 AT1G44575.1
NPQ4
Chlorophyll A-B binding family protein
Chr5_+_19825078 2.15 AT5G48900.1
AT5G48900
Pectin lyase-like superfamily protein
Chr3_-_5469594 2.15 AT3G16140.1
PSAH-1
photosystem I subunit H-1
Chr1_+_5489145 2.15 AT1G15980.1
PnsB1
NDH-dependent cyclic electron flow 1
Chr2_+_14173579 2.15 AT2G33450.1
PRPL28
Ribosomal L28 family
Chr3_+_19845097 2.15 AT3G53530.2
AT3G53530.1
NAKR3
Chloroplast-targeted copper chaperone protein
Chr3_+_22086333 2.14 AT3G59780.1
AT3G59780
Rhodanese/Cell cycle control phosphatase superfamily protein
Chr3_+_4956349 2.14 AT3G14760.1
AT3G14760
transmembrane protein
Chr3_+_2563803 2.14 AT3G08030.1
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr3_+_21076505 2.13 AT3G56940.1
AT3G56940.2
CRD1
dicarboxylate diiron protein, putative (Crd1)
Chr1_+_27452748 2.13 AT1G72970.1
AT1G72970.2
HTH
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr1_+_310169 2.13 AT1G01900.1
SBTI1.1
subtilase family protein
Chr4_-_7353117 2.12 AT4G12420.1
AT4G12420.2
SKU5
Cupredoxin superfamily protein
Chr2_+_18286321 2.12 AT2G44230.1
AT2G44230
hypothetical protein (DUF946)
Chr1_-_20803449 2.12 AT1G55670.1
PSAG
photosystem I subunit G
Chr3_-_2130451 2.11 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr2_+_19191247 2.11 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr3_+_2564153 2.11 AT3G08030.2
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr4_-_18165740 2.10 AT4G38970.2
FBA2
fructose-bisphosphate aldolase 2
Chr1_-_28603932 2.10 AT1G76240.1
AT1G76240
DUF241 domain protein (DUF241)
Chr4_-_18166008 2.10 AT4G38970.1
FBA2
fructose-bisphosphate aldolase 2
Chr5_-_24990331 2.09 AT5G62220.1
GT18
glycosyltransferase 18
Chr5_+_6457026 2.09 AT5G19190.1
AT5G19190
hypothetical protein
Chr1_+_28428671 2.08 AT1G75710.1
AT1G75710
C2H2-like zinc finger protein
Chr3_-_1136397 2.08 AT3G04290.1
LTL1
Li-tolerant lipase 1
Chr2_+_14427509 2.08 AT2G34170.3
AT2G34170.2
AT2G34170.1
AT2G34170.4
AT2G34170.5
AT2G34170.6
AT2G34170
hypothetical protein (DUF688)
Chr1_+_23911024 2.07 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
Chr5_+_18945543 2.07 AT5G46690.2
AT5G46690.1
bHLH071
beta HLH protein 71
Chr4_-_13398307 2.06 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
Chr5_-_21068327 2.06 AT5G51820.1
PGM
phosphoglucomutase
Chr5_-_23308680 2.06 AT5G57560.1
TCH4
Xyloglucan endotransglucosylase/hydrolase family protein
Chr3_+_188321 2.06 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
Chr4_-_13958107 2.05 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_-_19467455 2.04 AT3G52500.1
AT3G52500
Eukaryotic aspartyl protease family protein
Chr3_-_7187521 2.04 AT3G20570.1
ENODL9
early nodulin-like protein 9
Chr1_-_30041952 2.03 AT1G79850.1
RPS17
ribosomal protein S17
Chr4_-_9157133 2.03 AT4G16155.1
AT4G16155
dihydrolipoamide dehydrogenase
Chr5_-_753657 2.02 AT5G03170.1
FLA11
FASCICLIN-like arabinogalactan-protein 11
Chr4_+_12876822 2.01 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
Chr5_-_26453199 2.00 AT5G66190.2
AT5G66190.1
FNR1
ferredoxin-NADP[+]-oxidoreductase 1
Chr2_+_1033598 1.98 AT2G03410.1
AT2G03410
Mo25 family protein
Chr4_-_10203469 1.98 AT4G18480.1
CHLI1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_+_1952505 1.98 AT5G06390.1
FLA17
FASCICLIN-like arabinogalactan protein 17 precursor
Chr1_+_1231452 1.98 AT1G04520.1
PDLP2
plasmodesmata-located protein 2
Chr2_+_11550705 1.97 AT2G27060.1
AT2G27060.2
AT2G27060.3
AT2G27060
Leucine-rich repeat protein kinase family protein
Chr2_-_7727404 1.97 AT2G17780.2
AT2G17780.4
AT2G17780.5
AT2G17780.8
AT2G17780.10
AT2G17780.9
AT2G17780.1
AT2G17780.6
AT2G17780.3
AT2G17780.7
MCA2
PLAC8 family protein
Chr1_+_29117500 1.97 AT1G77490.1
AT1G77490.2
TAPX
thylakoidal ascorbate peroxidase
Chr4_+_160643 1.96 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr3_-_17495033 1.96 AT3G47470.1
LHCA4
light-harvesting chlorophyll-protein complex I subunit A4
Chr2_-_17827648 1.95 AT2G42840.1
PDF1
protodermal factor 1
Chr3_-_219104 1.94 AT3G01550.2
AT3G01550.1
PPT2
phosphoenolpyruvate (pep)/phosphate translocator 2
Chr3_-_6436046 1.94 AT3G18710.1
PUB29
plant U-box 29
Chr3_-_23165387 1.94 AT3G62630.1
AT3G62630
stress response NST1-like protein (DUF1645)
Chr2_-_15797059 1.93 AT2G37660.1
AT2G37660
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_-_5433851 1.93 AT3G16000.1
MFP1
MAR binding filament-like protein 1
Chr1_+_2047886 1.92 AT1G06680.2
PSBP-1
photosystem II subunit P-1
Chr1_+_2047634 1.92 AT1G06680.1
PSBP-1
photosystem II subunit P-1
Chr1_-_22317070 1.92 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr5_+_18530834 1.92 AT5G45680.1
FKBP13
FK506-binding protein 13
Chr4_-_14204061 1.92 AT4G28750.1
PSAE-1
Photosystem I reaction centre subunit IV / PsaE protein
Chr4_+_9803624 1.91 AT4G17600.1
LIL3:1
Chlorophyll A-B binding family protein
Chr3_+_20780175 1.91 AT3G55990.1
ESK1
trichome birefringence-like protein (DUF828)
Chr5_-_19899301 1.91 AT5G49100.1
AT5G49100
vitellogenin-like protein
Chr1_-_29485389 1.90 AT1G78370.1
GSTU20
glutathione S-transferase TAU 20
Chr4_-_16384468 1.90 AT4G34220.1
AT4G34220
Leucine-rich repeat protein kinase family protein
Chr3_-_3277930 1.90 AT3G10520.1
HB2
hemoglobin 2
Chr3_-_4042075 1.90 AT3G12710.1
AT3G12710
DNA glycosylase superfamily protein
Chr1_+_25374072 1.90 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
Chr1_-_11548016 1.89 AT1G32100.1
PRR1
pinoresinol reductase 1
Chr4_-_15429113 1.89 AT4G31890.2
AT4G31890.1
AT4G31890.3
AT4G31890
ARM repeat superfamily protein
Chr1_-_25833966 1.88 AT1G68780.1
AT1G68780
RNI-like superfamily protein
Chr1_-_1169034 1.88 AT1G04360.1
AT1G04360
RING/U-box superfamily protein
Chr4_+_13177356 1.88 AT4G25960.1
ABCB2
P-glycoprotein 2
Chr5_+_5968352 1.88 AT5G18030.1
AT5G18030
SAUR-like auxin-responsive protein family
Chr5_-_19166135 1.86 AT5G47190.1
AT5G47190
Ribosomal protein L19 family protein
Chr1_+_24229063 1.86 AT1G65230.1
AT1G65230
transmembrane protein, putative (DUF2358)
Chr5_+_6387341 1.86 AT5G19090.1
AT5G19090.4
AT5G19090.3
AT5G19090.2
AT5G19090
Heavy metal transport/detoxification superfamily protein
Chr1_+_9259750 1.86 AT1G26770.2
EXPA10
expansin A10
Chr2_+_19521774 1.86 AT2G47590.1
PHR2
photolyase/blue-light receptor 2
Chr5_+_4974671 1.85 AT5G15310.2
AT5G15310.4
AT5G15310.3
AT5G15310.1
MYB16
myb domain protein 16
Chr2_+_6542166 1.85 AT2G15090.1
KCS8
3-ketoacyl-CoA synthase 8
Chr1_-_6579314 1.85 AT1G19050.1
ARR7
response regulator 7
Chr4_+_4886962 1.85 AT4G08040.1
ACS11
1-aminocyclopropane-1-carboxylate synthase 11
Chr5_-_20940895 1.85 AT5G51550.1
EXL3
EXORDIUM like 3
Chr5_-_5310951 1.83 AT5G16250.1
AT5G16250
transmembrane protein
Chr3_+_20709294 1.83 AT3G55800.1
SBPASE
sedoheptulose-bisphosphatase
Chr3_-_2656297 1.83 AT3G08740.1
AT3G08740
elongation factor P (EF-P) family protein
Chr2_+_12014412 1.82 AT2G28190.1
CSD2
copper/zinc superoxide dismutase 2
Chr1_-_11872926 1.82 AT1G32780.1
AT1G32780
GroES-like zinc-binding dehydrogenase family protein
Chr2_-_13797237 1.81 AT2G32500.2
AT2G32500.1
AT2G32500
Stress responsive alpha-beta barrel domain protein
Chr2_+_12254888 1.81 AT2G28605.1
AT2G28605
Photosystem II reaction center PsbP family protein
Chr4_+_11663186 1.81 AT4G22010.1
sks4
SKU5 similar 4
Chr3_+_20016837 1.81 AT3G54050.1
AT3G54050.2
HCEF1
high cyclic electron flow 1
Chr1_+_9259432 1.80 AT1G26770.1
EXPA10
expansin A10
Chr2_-_1149261 1.79 AT2G03750.1
AT2G03750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_-_1307973 1.78 AT1G04680.1
AT1G04680
Pectin lyase-like superfamily protein
Chr2_+_15445294 1.78 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr1_-_1702749 1.78 AT1G05675.1
AT1G05675
UDP-Glycosyltransferase superfamily protein
Chr4_-_2352025 1.78 AT4G04640.1
ATPC1
ATPase, F1 complex, gamma subunit protein
Chr2_-_11173278 1.78 AT2G26250.1
KCS10
3-ketoacyl-CoA synthase 10
Chr5_-_1726932 1.78 AT5G05740.1
AT5G05740.3
AT5G05740.2
EGY2
ethylene-dependent gravitropism-deficient and yellow-green-like 2
Chr1_-_23137254 1.77 AT1G62510.1
AT1G62510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_13830429 1.77 AT5G35630.1
GS2
glutamine synthetase 2
Chr3_+_6752422 1.76 AT3G19480.1
AT3G19480
D-3-phosphoglycerate dehydrogenase
Chr5_+_13831020 1.76 AT5G35630.2
GS2
glutamine synthetase 2
Chr5_+_24167996 1.76 AT5G60020.1
AT5G60020.2
LAC17
laccase 17
Chr5_+_13830746 1.76 AT5G35630.3
GS2
glutamine synthetase 2
Chr5_+_15421573 1.76 AT5G38520.2
AT5G38520
alpha/beta-Hydrolases superfamily protein
Chr1_-_18690503 1.76 AT1G50450.1
AT1G50450
Saccharopine dehydrogenase

Network of associatons between targets according to the STRING database.

First level regulatory network of AT3G03200

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 8.6 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
1.2 10.5 GO:0051513 regulation of monopolar cell growth(GO:0051513)
1.0 4.8 GO:0042550 photosystem I stabilization(GO:0042550)
1.0 3.8 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
1.0 2.9 GO:0042353 fucose biosynthetic process(GO:0042353)
0.8 7.3 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.7 1.5 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.7 2.9 GO:0080093 regulation of photorespiration(GO:0080093)
0.7 14.0 GO:0006949 syncytium formation(GO:0006949)
0.7 7.3 GO:0019676 ammonia assimilation cycle(GO:0019676)
0.7 9.9 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.7 2.1 GO:1903961 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.7 3.5 GO:0031055 chromatin remodeling at centromere(GO:0031055)
0.7 16.1 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.7 3.3 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.6 4.5 GO:0010067 procambium histogenesis(GO:0010067)
0.6 1.9 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.6 3.1 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.6 1.9 GO:0035017 cuticle pattern formation(GO:0035017)
0.6 1.7 GO:0030811 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.6 2.9 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.6 1.7 GO:0046385 nucleoside triphosphate catabolic process(GO:0009143) pyrimidine deoxyribonucleoside triphosphate metabolic process(GO:0009211) pyrimidine deoxyribonucleotide metabolic process(GO:0009219) pyrimidine deoxyribonucleotide biosynthetic process(GO:0009221) deoxyribonucleotide catabolic process(GO:0009264) 2'-deoxyribonucleotide biosynthetic process(GO:0009265) deoxyribose phosphate biosynthetic process(GO:0046385)
0.5 1.6 GO:0042660 positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.5 3.8 GO:1902932 positive regulation of alcohol biosynthetic process(GO:1902932)
0.5 2.7 GO:0010226 response to lithium ion(GO:0010226)
0.5 1.6 GO:0010541 acropetal auxin transport(GO:0010541)
0.5 1.6 GO:0090058 metaxylem development(GO:0090058)
0.5 2.6 GO:0042549 photosystem II stabilization(GO:0042549)
0.5 2.0 GO:0070509 calcium ion import(GO:0070509)
0.5 2.5 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.5 2.9 GO:0042659 regulation of cell fate specification(GO:0042659)
0.5 1.9 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
0.5 8.7 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.5 1.9 GO:0015669 gas transport(GO:0015669)
0.5 1.9 GO:0019218 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.5 1.4 GO:0071457 cellular response to ozone(GO:0071457)
0.5 3.7 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.5 1.8 GO:0006824 cobalt ion transport(GO:0006824)
0.5 1.4 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.4 6.3 GO:0030497 fatty acid elongation(GO:0030497)
0.4 2.7 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.4 0.9 GO:0090603 sieve element differentiation(GO:0090603)
0.4 2.6 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.4 6.9 GO:0015976 carbon utilization(GO:0015976)
0.4 6.5 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.4 2.6 GO:0000719 photoreactive repair(GO:0000719)
0.4 0.4 GO:0048530 fruit morphogenesis(GO:0048530)
0.4 2.1 GO:0010450 inflorescence meristem growth(GO:0010450)
0.4 1.2 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.4 1.6 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.4 2.4 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.4 5.7 GO:0009765 photosynthesis, light harvesting(GO:0009765)
0.4 1.2 GO:0072526 pyridoxal metabolic process(GO:0042817) pyridine-containing compound catabolic process(GO:0072526)
0.4 2.0 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.4 4.8 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.4 0.4 GO:0009803 cinnamic acid metabolic process(GO:0009803)
0.4 4.0 GO:0010088 phloem development(GO:0010088)
0.4 2.8 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.4 2.4 GO:0046087 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.4 2.0 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.4 4.3 GO:0045492 xylan biosynthetic process(GO:0045492)
0.4 0.4 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.4 43.8 GO:0015979 photosynthesis(GO:0015979)
0.4 4.5 GO:0032544 plastid translation(GO:0032544)
0.4 1.1 GO:0045857 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.4 2.2 GO:0048533 sporocyte differentiation(GO:0048533)
0.4 1.1 GO:0006659 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.4 1.4 GO:0006023 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.4 1.4 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.4 7.8 GO:0045493 xylan catabolic process(GO:0045493)
0.4 10.5 GO:0042335 cuticle development(GO:0042335)
0.4 1.8 GO:0035970 peptidyl-threonine dephosphorylation(GO:0035970)
0.3 2.4 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.3 4.2 GO:0007143 female meiotic division(GO:0007143)
0.3 2.0 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.3 1.0 GO:0009660 amyloplast organization(GO:0009660)
0.3 1.6 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.3 1.6 GO:0051318 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.3 1.3 GO:0010376 stomatal complex formation(GO:0010376)
0.3 5.8 GO:0009959 negative gravitropism(GO:0009959)
0.3 27.5 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.3 1.2 GO:0000023 maltose metabolic process(GO:0000023)
0.3 0.9 GO:0019594 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.3 0.3 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.3 0.9 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.3 4.4 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.3 4.4 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.3 0.9 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.3 9.0 GO:0006284 base-excision repair(GO:0006284)
0.3 0.9 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.3 1.1 GO:0051211 anisotropic cell growth(GO:0051211)
0.3 1.1 GO:0080003 thalianol metabolic process(GO:0080003)
0.3 1.1 GO:0009865 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.3 1.4 GO:0009590 detection of gravity(GO:0009590)
0.3 1.4 GO:0009647 skotomorphogenesis(GO:0009647)
0.3 2.7 GO:0033619 membrane protein proteolysis(GO:0033619)
0.3 0.8 GO:0048729 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.3 1.9 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.3 1.3 GO:1901571 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.3 1.9 GO:1902969 mitotic DNA replication(GO:1902969)
0.3 0.3 GO:0050891 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.3 0.8 GO:0046102 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.3 0.8 GO:0033506 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.3 4.4 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.3 0.5 GO:1901672 positive regulation of systemic acquired resistance(GO:1901672)
0.3 0.8 GO:0080117 secondary growth(GO:0080117) lateral growth(GO:0080190)
0.3 1.0 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.3 0.8 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.2 1.0 GO:0051455 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.2 1.2 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.2 1.2 GO:0001578 microtubule bundle formation(GO:0001578)
0.2 0.7 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.2 1.2 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.2 16.5 GO:0007018 microtubule-based movement(GO:0007018)
0.2 4.3 GO:0010025 wax biosynthetic process(GO:0010025)
0.2 0.7 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.2 3.6 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.2 0.7 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.2 0.5 GO:0007112 male meiosis cytokinesis(GO:0007112)
0.2 1.2 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.2 0.9 GO:0002943 tRNA dihydrouridine synthesis(GO:0002943)
0.2 0.7 GO:0034969 histone arginine methylation(GO:0034969)
0.2 0.2 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.2 1.3 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.2 0.7 GO:0051639 actin filament network formation(GO:0051639)
0.2 1.8 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.2 0.7 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.2 1.1 GO:2000574 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.2 11.7 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.2 0.8 GO:0030856 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.2 4.0 GO:0031425 chloroplast RNA processing(GO:0031425)
0.2 0.8 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.2 0.6 GO:1900151 regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.2 0.8 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.2 1.3 GO:0097502 mannosylation(GO:0097502)
0.2 1.2 GO:0071586 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.2 3.3 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.2 3.3 GO:0000373 Group II intron splicing(GO:0000373)
0.2 1.2 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.2 1.8 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.2 3.6 GO:0008544 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.2 1.0 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.2 0.6 GO:0010045 response to nickel cation(GO:0010045)
0.2 2.2 GO:0009641 shade avoidance(GO:0009641)
0.2 0.8 GO:2000279 regulation of telomere maintenance via telomerase(GO:0032210) regulation of telomere maintenance via telomere lengthening(GO:1904356) negative regulation of DNA biosynthetic process(GO:2000279)
0.2 5.2 GO:0016129 phytosteroid biosynthetic process(GO:0016129) brassinosteroid biosynthetic process(GO:0016132)
0.2 0.8 GO:0080141 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.2 0.6 GO:0042539 hypotonic salinity response(GO:0042539)
0.2 0.8 GO:0072718 response to cisplatin(GO:0072718)
0.2 5.0 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.2 1.1 GO:0000379 tRNA-type intron splice site recognition and cleavage(GO:0000379)
0.2 0.8 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.2 0.9 GO:0048629 trichome patterning(GO:0048629)
0.2 10.2 GO:0007267 cell-cell signaling(GO:0007267)
0.2 0.9 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.2 1.8 GO:0046083 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.2 1.4 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.2 0.5 GO:0035404 histone-serine phosphorylation(GO:0035404) histone H3-S10 phosphorylation(GO:0043987)
0.2 1.1 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.2 4.3 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.2 0.5 GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.2 0.7 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.2 0.5 GO:0010446 response to alkaline pH(GO:0010446)
0.2 2.8 GO:0009299 mRNA transcription(GO:0009299)
0.2 0.2 GO:0051480 regulation of cytosolic calcium ion concentration(GO:0051480)
0.2 1.5 GO:0043410 positive regulation of MAPK cascade(GO:0043410)
0.2 0.5 GO:0010047 fruit dehiscence(GO:0010047)
0.2 1.3 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.2 0.7 GO:0099636 cytoplasmic streaming(GO:0099636)
0.2 1.1 GO:0033384 geranyl diphosphate metabolic process(GO:0033383) geranyl diphosphate biosynthetic process(GO:0033384)
0.2 1.6 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.2 0.3 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.2 1.3 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.2 1.1 GO:0048658 anther wall tapetum development(GO:0048658)
0.2 1.4 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.2 1.1 GO:2000601 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.2 0.8 GO:0071490 cellular response to far red light(GO:0071490)
0.1 4.7 GO:0010928 regulation of auxin mediated signaling pathway(GO:0010928)
0.1 13.0 GO:0045490 pectin catabolic process(GO:0045490)
0.1 2.5 GO:0070726 cell wall assembly(GO:0070726) plant-type cell wall assembly(GO:0071668)
0.1 2.5 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.1 1.4 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.1 1.9 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.1 1.0 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 0.6 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.1 1.0 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.1 1.5 GO:0010158 abaxial cell fate specification(GO:0010158)
0.1 0.4 GO:0007130 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.1 0.5 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.1 0.4 GO:2001009 regulation of plant-type cell wall cellulose biosynthetic process(GO:2001009)
0.1 2.2 GO:0050821 protein stabilization(GO:0050821)
0.1 0.5 GO:0052746 inositol phosphorylation(GO:0052746)
0.1 0.8 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 0.6 GO:0010359 regulation of anion channel activity(GO:0010359)
0.1 0.6 GO:0042391 regulation of membrane potential(GO:0042391)
0.1 0.6 GO:0007043 cell-cell junction assembly(GO:0007043)
0.1 3.1 GO:0009638 phototropism(GO:0009638)
0.1 0.2 GO:0031054 pre-miRNA processing(GO:0031054)
0.1 2.0 GO:0009686 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)
0.1 0.4 GO:0008153 para-aminobenzoic acid biosynthetic process(GO:0008153)
0.1 0.5 GO:0010338 leaf formation(GO:0010338)
0.1 1.0 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.1 0.4 GO:1902534 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.1 0.6 GO:0035279 leaf proximal/distal pattern formation(GO:0010589) mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795)
0.1 0.3 GO:0007032 endosome organization(GO:0007032)
0.1 0.5 GO:0046949 fatty-acyl-CoA biosynthetic process(GO:0046949)
0.1 0.5 GO:0071431 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.1 0.3 GO:1990532 stress response to nickel ion(GO:1990532)
0.1 1.6 GO:0071483 cellular response to blue light(GO:0071483)
0.1 0.8 GO:0006552 leucine catabolic process(GO:0006552)
0.1 0.3 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.1 1.4 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.1 0.5 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.1 0.4 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.1 0.5 GO:0007142 male meiosis II(GO:0007142)
0.1 6.4 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.1 0.8 GO:0045003 double-strand break repair via synthesis-dependent strand annealing(GO:0045003)
0.1 2.3 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.1 3.2 GO:0030705 vesicle transport along actin filament(GO:0030050) cytoskeleton-dependent intracellular transport(GO:0030705) actin filament-based transport(GO:0099515) vesicle cytoskeletal trafficking(GO:0099518)
0.1 0.4 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.1 0.4 GO:0034367 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.1 1.1 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.1 1.4 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 0.7 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 0.4 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.1 6.8 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.1 3.0 GO:0000272 polysaccharide catabolic process(GO:0000272)
0.1 0.6 GO:0010449 root meristem growth(GO:0010449)
0.1 0.4 GO:0010375 stomatal complex patterning(GO:0010375)
0.1 0.3 GO:0009584 detection of visible light(GO:0009584)
0.1 0.4 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.1 0.9 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 2.3 GO:0010584 pollen exine formation(GO:0010584)
0.1 1.2 GO:0009704 de-etiolation(GO:0009704)
0.1 0.8 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.1 1.2 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.1 2.1 GO:0010027 thylakoid membrane organization(GO:0010027)
0.1 0.6 GO:0090057 root radial pattern formation(GO:0090057)
0.1 0.3 GO:0043132 NAD transport(GO:0043132)
0.1 0.3 GO:0000494 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.1 0.4 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.1 0.6 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 0.5 GO:0019419 sulfate reduction(GO:0019419)
0.1 0.7 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.1 0.4 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 0.3 GO:0033259 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.1 0.4 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 0.6 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 0.3 GO:0048479 style development(GO:0048479)
0.1 1.5 GO:0006270 DNA replication initiation(GO:0006270)
0.1 0.3 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 0.6 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.1 0.5 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.1 0.7 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 0.9 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.1 0.9 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.1 0.2 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.1 1.2 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.1 0.8 GO:0036065 fucosylation(GO:0036065)
0.1 0.4 GO:0032012 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012) regulation of Ras protein signal transduction(GO:0046578) regulation of small GTPase mediated signal transduction(GO:0051056)
0.1 1.2 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 0.2 GO:0009093 cysteine catabolic process(GO:0009093)
0.1 2.1 GO:0007062 sister chromatid cohesion(GO:0007062)
0.1 2.7 GO:2000030 regulation of response to red or far red light(GO:2000030)
0.1 0.3 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.1 1.1 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.1 0.8 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.1 0.4 GO:0007602 phototransduction(GO:0007602) detection of light stimulus(GO:0009583) red, far-red light phototransduction(GO:0009585)
0.1 0.2 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.1 0.9 GO:0008156 negative regulation of DNA replication(GO:0008156) negative regulation of DNA-dependent DNA replication(GO:2000104)
0.1 10.3 GO:0009657 plastid organization(GO:0009657)
0.1 1.9 GO:0009612 response to mechanical stimulus(GO:0009612)
0.1 0.5 GO:0045338 farnesyl diphosphate metabolic process(GO:0045338)
0.1 0.7 GO:0046451 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.1 0.3 GO:0019427 acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.1 0.2 GO:0016094 polyprenol biosynthetic process(GO:0016094)
0.1 2.3 GO:0007131 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.1 0.8 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.1 0.2 GO:0019252 starch biosynthetic process(GO:0019252)
0.1 0.8 GO:0010143 cutin biosynthetic process(GO:0010143)
0.1 0.2 GO:0048439 flower morphogenesis(GO:0048439)
0.1 0.5 GO:0015689 molybdate ion transport(GO:0015689)
0.1 0.6 GO:0009799 specification of symmetry(GO:0009799)
0.1 0.3 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.1 0.7 GO:0010214 seed coat development(GO:0010214)
0.1 0.8 GO:0010332 response to gamma radiation(GO:0010332)
0.1 1.7 GO:0010582 floral meristem determinacy(GO:0010582)
0.1 0.4 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.1 0.3 GO:0016131 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.1 0.3 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.1 1.1 GO:0010152 pollen maturation(GO:0010152)
0.1 0.5 GO:0006308 DNA catabolic process(GO:0006308)
0.1 0.2 GO:0035335 peptidyl-tyrosine dephosphorylation(GO:0035335)
0.1 0.4 GO:0010262 somatic embryogenesis(GO:0010262)
0.1 0.4 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 0.1 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 0.4 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.1 0.5 GO:0009231 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.1 0.3 GO:0048598 embryonic morphogenesis(GO:0048598)
0.1 0.5 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 1.6 GO:0009960 endosperm development(GO:0009960)
0.1 0.2 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 0.3 GO:0015824 proline transport(GO:0015824)
0.1 1.3 GO:0042330 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.1 0.3 GO:0014074 response to purine-containing compound(GO:0014074) response to organophosphorus(GO:0046683)
0.1 0.6 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.1 0.3 GO:0032958 inositol phosphate biosynthetic process(GO:0032958)
0.1 0.2 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.1 1.5 GO:0010075 regulation of meristem growth(GO:0010075)
0.1 4.9 GO:0080167 response to karrikin(GO:0080167)
0.1 0.7 GO:0010274 hydrotropism(GO:0010274)
0.1 0.6 GO:0005987 sucrose catabolic process(GO:0005987)
0.1 1.7 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.2 GO:0071423 malate transmembrane transport(GO:0071423)
0.0 0.2 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.0 0.2 GO:0015739 sialic acid transport(GO:0015739)
0.0 0.6 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 1.2 GO:0048825 cotyledon development(GO:0048825)
0.0 0.3 GO:0070982 L-asparagine biosynthetic process(GO:0070981) L-asparagine metabolic process(GO:0070982)
0.0 0.3 GO:0032875 regulation of DNA endoreduplication(GO:0032875)
0.0 0.5 GO:1904668 regulation of ubiquitin protein ligase activity(GO:1904666) positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0 0.4 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 1.8 GO:0009809 lignin biosynthetic process(GO:0009809)
0.0 0.7 GO:0009958 positive gravitropism(GO:0009958)
0.0 0.2 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.0 0.2 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.5 GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation(GO:0006616)
0.0 0.3 GO:0016926 protein desumoylation(GO:0016926)
0.0 0.4 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.6 GO:0030488 tRNA methylation(GO:0030488)
0.0 1.0 GO:0032543 mitochondrial translation(GO:0032543)
0.0 0.2 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.0 0.5 GO:0036297 interstrand cross-link repair(GO:0036297)
0.0 0.3 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.2 GO:0006751 glutathione catabolic process(GO:0006751) cellular modified amino acid catabolic process(GO:0042219)
0.0 0.1 GO:0042344 indole glucosinolate catabolic process(GO:0042344) ER body organization(GO:0080119)
0.0 0.3 GO:0046654 tetrahydrofolate biosynthetic process(GO:0046654)
0.0 0.2 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.0 0.1 GO:0006430 lysyl-tRNA aminoacylation(GO:0006430)
0.0 0.5 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.3 GO:0010208 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.0 0.6 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.4 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.1 GO:0051103 DNA ligation involved in DNA repair(GO:0051103)
0.0 1.0 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 0.4 GO:0018401 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.0 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.0 1.0 GO:0048481 plant ovule development(GO:0048481)
0.0 0.4 GO:0010363 regulation of plant-type hypersensitive response(GO:0010363)
0.0 0.2 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.0 3.2 GO:0009860 pollen tube growth(GO:0009860)
0.0 0.4 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.0 0.1 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 0.1 GO:0016120 carotene biosynthetic process(GO:0016120)
0.0 0.1 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.0 0.6 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.3 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.3 GO:0070475 rRNA base methylation(GO:0070475)
0.0 1.1 GO:0006400 tRNA modification(GO:0006400)
0.0 0.6 GO:0019915 lipid storage(GO:0019915)
0.0 0.1 GO:0043981 histone H4-K5 acetylation(GO:0043981)
0.0 0.4 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.0 0.1 GO:0009190 cyclic nucleotide biosynthetic process(GO:0009190) cyclic purine nucleotide metabolic process(GO:0052652)
0.0 0.2 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.1 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.0 0.1 GO:0051653 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.0 0.6 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.2 GO:0009240 isopentenyl diphosphate biosynthetic process(GO:0009240) isopentenyl diphosphate metabolic process(GO:0046490)
0.0 0.0 GO:0030656 regulation of vitamin metabolic process(GO:0030656)
0.0 0.2 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.0 0.2 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.0 0.7 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.8 GO:0009664 plant-type cell wall organization(GO:0009664)
0.0 0.7 GO:0042274 ribosomal small subunit biogenesis(GO:0042274)
0.0 0.1 GO:0015780 nucleotide-sugar transport(GO:0015780)
0.0 0.2 GO:0080027 response to herbivore(GO:0080027)
0.0 0.7 GO:0006414 translational elongation(GO:0006414)
0.0 0.1 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.0 0.6 GO:0043038 amino acid activation(GO:0043038) tRNA aminoacylation(GO:0043039)
0.0 0.1 GO:0070898 RNA polymerase III transcriptional preinitiation complex assembly(GO:0070898)
0.0 0.2 GO:0007009 plasma membrane organization(GO:0007009)
0.0 0.1 GO:0051503 adenine nucleotide transport(GO:0051503)
0.0 0.0 GO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.0 0.1 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 0.2 GO:0010218 response to far red light(GO:0010218)
0.0 0.8 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 0.5 GO:0010101 post-embryonic root morphogenesis(GO:0010101) lateral root morphogenesis(GO:0010102)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 4.5 GO:0030093 chloroplast photosystem I(GO:0030093)
1.0 9.3 GO:0009517 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
1.0 8.1 GO:0009538 photosystem I reaction center(GO:0009538)
0.9 0.9 GO:0016328 lateral plasma membrane(GO:0016328)
0.8 4.2 GO:0005960 glycine cleavage complex(GO:0005960)
0.8 4.0 GO:0009897 external side of plasma membrane(GO:0009897)
0.6 2.5 GO:0010330 cellulose synthase complex(GO:0010330)
0.6 15.4 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.6 1.8 GO:0043668 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.5 8.2 GO:0009531 secondary cell wall(GO:0009531)
0.5 0.5 GO:0009509 chromoplast(GO:0009509)
0.5 1.4 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.4 3.0 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.4 2.9 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.4 6.6 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.4 2.0 GO:0010007 magnesium chelatase complex(GO:0010007)
0.4 14.3 GO:0031977 thylakoid lumen(GO:0031977)
0.3 18.6 GO:0010287 plastoglobule(GO:0010287)
0.3 1.3 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.3 2.0 GO:0031209 SCAR complex(GO:0031209)
0.3 3.0 GO:0042555 MCM complex(GO:0042555)
0.3 0.9 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.3 2.7 GO:0010369 chromocenter(GO:0010369)
0.3 1.2 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.3 81.6 GO:0009534 chloroplast thylakoid(GO:0009534)
0.3 2.5 GO:0030139 endocytic vesicle(GO:0030139)
0.3 0.8 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.3 2.4 GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.2 17.1 GO:0009579 thylakoid(GO:0009579)
0.2 3.9 GO:0010319 stromule(GO:0010319)
0.2 1.2 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.2 0.7 GO:0032432 actin filament bundle(GO:0032432)
0.2 1.1 GO:0030286 dynein complex(GO:0030286)
0.2 0.9 GO:0032807 DNA ligase IV complex(GO:0032807)
0.2 1.9 GO:0016272 prefoldin complex(GO:0016272)
0.2 1.1 GO:0000214 tRNA-intron endonuclease complex(GO:0000214)
0.2 0.7 GO:0032044 DSIF complex(GO:0032044)
0.2 2.2 GO:0045298 tubulin complex(GO:0045298)
0.2 1.5 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.2 1.2 GO:0035619 root hair(GO:0035618) root hair tip(GO:0035619)
0.1 0.9 GO:0000796 condensin complex(GO:0000796)
0.1 1.0 GO:0000798 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.1 0.4 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 2.7 GO:0031012 extracellular matrix(GO:0031012)
0.1 0.6 GO:0000783 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.1 3.3 GO:0005871 kinesin complex(GO:0005871)
0.1 0.5 GO:0032133 chromosome passenger complex(GO:0032133)
0.1 0.3 GO:0009501 amyloplast(GO:0009501)
0.1 0.5 GO:0031298 replication fork protection complex(GO:0031298)
0.1 0.8 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.1 0.9 GO:0031261 DNA replication preinitiation complex(GO:0031261)
0.1 1.4 GO:0009986 cell surface(GO:0009986)
0.1 2.9 GO:0005875 microtubule associated complex(GO:0005875)
0.1 1.2 GO:0072686 mitotic spindle(GO:0072686)
0.1 18.5 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 1.0 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 1.6 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.1 1.8 GO:0016459 myosin complex(GO:0016459)
0.1 0.4 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 21.4 GO:0048046 apoplast(GO:0048046)
0.1 0.7 GO:0044665 MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339)
0.1 2.0 GO:0016324 apical plasma membrane(GO:0016324)
0.1 0.5 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 0.9 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.1 14.6 GO:0009505 plant-type cell wall(GO:0009505)
0.1 0.3 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.1 1.3 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.1 0.5 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.1 0.6 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.1 0.2 GO:0005905 clathrin-coated pit(GO:0005905)
0.1 2.7 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 1.6 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.1 0.3 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.1 0.3 GO:0000812 Swr1 complex(GO:0000812)
0.1 0.4 GO:0005876 spindle microtubule(GO:0005876)
0.1 1.3 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 27.9 GO:0009570 chloroplast stroma(GO:0009570)
0.1 0.5 GO:0005784 Sec61 translocon complex(GO:0005784)
0.1 0.7 GO:0005880 nuclear microtubule(GO:0005880)
0.1 0.4 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.1 1.4 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.2 GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.0 0.3 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 2.5 GO:0031969 chloroplast membrane(GO:0031969)
0.0 0.3 GO:0098562 cytoplasmic side of membrane(GO:0098562)
0.0 4.2 GO:0005615 extracellular space(GO:0005615)
0.0 0.4 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 1.6 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.0 0.4 GO:0000815 ESCRT III complex(GO:0000815)
0.0 4.8 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 0.2 GO:0000938 GARP complex(GO:0000938)
0.0 0.9 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 3.2 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.5 GO:0005769 early endosome(GO:0005769)
0.0 0.2 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.0 6.3 GO:0009941 chloroplast envelope(GO:0009941)
0.0 3.3 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.2 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 0.3 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.2 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.1 GO:0005846 nuclear cap binding complex(GO:0005846)
0.0 0.8 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 0.3 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.0 0.5 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.0 0.5 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 4.0 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.0 GO:0097361 CIA complex(GO:0097361)
0.0 1.2 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.1 GO:0000126 transcription factor TFIIIB complex(GO:0000126)
0.0 0.5 GO:0032040 small-subunit processome(GO:0032040)
0.0 0.1 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.0 0.7 GO:0015629 actin cytoskeleton(GO:0015629)
0.0 0.0 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.0 0.1 GO:0090576 transcription factor TFIIIC complex(GO:0000127) RNA polymerase III transcription factor complex(GO:0090576)
0.0 0.1 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.0 0.1 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.4 14.6 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
2.2 6.5 GO:0051738 xanthophyll binding(GO:0051738)
1.5 5.9 GO:0050162 oxalate oxidase activity(GO:0050162)
1.2 3.7 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
1.1 3.4 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
1.0 4.2 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.9 3.6 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.9 8.0 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.9 2.6 GO:0010242 oxygen evolving activity(GO:0010242)
0.8 2.3 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.7 6.5 GO:0009922 fatty acid elongase activity(GO:0009922)
0.7 2.7 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.7 3.3 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.7 2.0 GO:0016643 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.6 5.2 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.6 1.9 GO:0005344 oxygen transporter activity(GO:0005344)
0.6 1.9 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.6 1.8 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.6 4.2 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.6 3.5 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.6 13.3 GO:0016168 chlorophyll binding(GO:0016168)
0.6 1.7 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.6 2.3 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.6 1.7 GO:0016642 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.5 2.1 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.5 4.1 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.5 5.6 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.5 1.5 GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.5 5.8 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.5 0.5 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.5 1.9 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.5 3.2 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.5 2.3 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.4 8.9 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.4 8.0 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.4 1.3 GO:0004560 alpha-L-fucosidase activity(GO:0004560)
0.4 5.3 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.4 1.3 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.4 2.6 GO:0003913 DNA photolyase activity(GO:0003913)
0.4 2.1 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.4 1.2 GO:0015099 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.4 2.0 GO:0015434 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.4 5.3 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.4 3.6 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.4 2.0 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.4 2.4 GO:0004126 cytidine deaminase activity(GO:0004126)
0.4 2.0 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.4 5.7 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.4 1.1 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.3 1.4 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.3 1.3 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.3 1.0 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.3 2.0 GO:0016851 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.3 2.0 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.3 2.6 GO:0042299 lupeol synthase activity(GO:0042299)
0.3 1.9 GO:0015120 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.3 9.3 GO:0008266 poly(U) RNA binding(GO:0008266)
0.3 1.9 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.3 4.4 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.3 4.4 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.3 1.6 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.3 0.9 GO:0043140 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.3 0.9 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.3 1.2 GO:0070402 NADPH binding(GO:0070402)
0.3 2.7 GO:0010428 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.3 0.9 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.3 1.4 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.3 2.3 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.3 1.7 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.3 2.0 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.3 6.9 GO:0004565 beta-galactosidase activity(GO:0004565)
0.3 2.7 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.3 2.7 GO:0016872 intramolecular lyase activity(GO:0016872)
0.3 5.9 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.3 2.4 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.3 2.6 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.3 4.4 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.3 0.8 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.3 2.3 GO:0043495 protein anchor(GO:0043495)
0.3 18.7 GO:0003777 microtubule motor activity(GO:0003777)
0.3 1.0 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.3 3.0 GO:0019104 DNA N-glycosylase activity(GO:0019104)
0.3 0.8 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.2 2.9 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.2 0.5 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.2 1.0 GO:0016882 cyclo-ligase activity(GO:0016882)
0.2 1.0 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.2 1.4 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.2 1.9 GO:0010011 auxin binding(GO:0010011)
0.2 0.7 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.2 5.9 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.2 0.9 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.2 1.8 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.2 1.8 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.2 3.2 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.2 2.4 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.2 1.3 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.2 7.1 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.2 1.1 GO:0045505 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.2 0.4 GO:0019789 SUMO transferase activity(GO:0019789)
0.2 0.9 GO:0035241 protein-arginine omega-N monomethyltransferase activity(GO:0035241)
0.2 2.3 GO:0016161 beta-amylase activity(GO:0016161)
0.2 3.1 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.2 0.6 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.2 0.8 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.2 0.4 GO:0052736 beta-glucanase activity(GO:0052736)
0.2 2.3 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.2 1.3 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.2 1.5 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.2 0.4 GO:0008192 mRNA guanylyltransferase activity(GO:0004484) polynucleotide 5'-phosphatase activity(GO:0004651) RNA guanylyltransferase activity(GO:0008192) polynucleotide phosphatase activity(GO:0098518)
0.2 1.7 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.2 1.1 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.2 0.7 GO:0042409 caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.2 0.6 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.2 0.6 GO:0010521 telomerase inhibitor activity(GO:0010521)
0.2 0.7 GO:0010285 L,L-diaminopimelate aminotransferase activity(GO:0010285)
0.2 0.9 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.2 0.5 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.2 1.5 GO:0005350 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.2 1.8 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.2 0.5 GO:0008061 chitin binding(GO:0008061)
0.2 1.2 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.2 0.9 GO:0016768 spermine synthase activity(GO:0016768)
0.2 0.9 GO:0008430 selenium binding(GO:0008430)
0.2 3.4 GO:0005199 structural constituent of cell wall(GO:0005199)
0.2 1.0 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.2 0.8 GO:0035197 siRNA binding(GO:0035197)
0.2 0.3 GO:0004557 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.2 1.3 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.2 1.1 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.2 0.6 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.2 4.3 GO:0008810 cellulase activity(GO:0008810)
0.2 1.3 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.2 6.9 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.2 3.0 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.2 1.8 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.2 2.0 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.2 1.1 GO:0034237 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.2 1.2 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.1 10.0 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 2.5 GO:0070628 proteasome binding(GO:0070628)
0.1 4.2 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 3.4 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 0.7 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 0.4 GO:0005034 osmosensor activity(GO:0005034)
0.1 1.5 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.1 0.5 GO:0035174 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.1 1.0 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.5 GO:0004310 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.1 0.4 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.1 0.5 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.1 2.4 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 0.5 GO:0003680 AT DNA binding(GO:0003680)
0.1 0.2 GO:0047517 1,4-beta-D-xylan synthase activity(GO:0047517)
0.1 5.0 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 2.3 GO:0008138 protein tyrosine/serine/threonine phosphatase activity(GO:0008138)
0.1 0.2 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.1 5.7 GO:0016759 cellulose synthase activity(GO:0016759)
0.1 0.8 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.1 13.2 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 0.5 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.1 0.5 GO:0032977 membrane insertase activity(GO:0032977)
0.1 0.5 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.1 0.8 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 0.8 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.3 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.1 0.3 GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.1 3.2 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.1 0.7 GO:0004663 Rab geranylgeranyltransferase activity(GO:0004663)
0.1 0.6 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.8 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.5 GO:0034511 U3 snoRNA binding(GO:0034511)
0.1 1.4 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 0.5 GO:0016724 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.1 1.7 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.4 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.1 0.5 GO:0043765 T/G mismatch-specific endonuclease activity(GO:0043765)
0.1 5.8 GO:0043621 protein self-association(GO:0043621)
0.1 1.7 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 0.4 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.1 1.1 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 1.0 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 0.3 GO:1990259 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.1 0.9 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.1 0.3 GO:0016880 ammonia ligase activity(GO:0016211) acid-ammonia (or amide) ligase activity(GO:0016880)
0.1 0.4 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.1 1.0 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 0.6 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 0.9 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.1 6.0 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 0.4 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.1 0.6 GO:0001671 ATPase activator activity(GO:0001671)
0.1 2.1 GO:0008378 galactosyltransferase activity(GO:0008378)
0.1 0.3 GO:0070140 ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.1 0.3 GO:0046976 histone methyltransferase activity (H3-K27 specific)(GO:0046976)
0.1 0.4 GO:0036374 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.1 2.9 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.1 0.3 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 0.2 GO:0080102 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.1 1.2 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 0.3 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.1 0.5 GO:0048487 beta-tubulin binding(GO:0048487)
0.1 0.2 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.1 0.4 GO:0004033 aldo-keto reductase (NADP) activity(GO:0004033) alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.1 0.4 GO:0010313 phytochrome binding(GO:0010313)
0.1 0.4 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.1 GO:0015928 fucosidase activity(GO:0015928)
0.1 0.7 GO:0031078 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 1.3 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.1 1.1 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.1 1.2 GO:0003725 double-stranded RNA binding(GO:0003725)
0.1 1.7 GO:0004568 chitinase activity(GO:0004568)
0.1 1.4 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.1 0.3 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.1 0.5 GO:0016151 nickel cation binding(GO:0016151)
0.1 0.3 GO:0047627 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.1 0.5 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.1 1.3 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 0.3 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.1 0.9 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 0.7 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.1 0.5 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.1 0.9 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 0.6 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.1 1.2 GO:0030599 pectinesterase activity(GO:0030599)
0.1 2.0 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.1 0.2 GO:0016453 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.1 0.2 GO:0004477 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.1 0.3 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.1 0.2 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.4 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.1 0.4 GO:0004340 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 0.6 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.1 1.4 GO:0033558 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.1 0.3 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.1 1.7 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.7 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.1 1.7 GO:0005179 hormone activity(GO:0005179)
0.1 1.2 GO:0048029 monosaccharide binding(GO:0048029)
0.1 0.4 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.1 0.5 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.5 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 0.2 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.0 0.2 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)
0.0 2.8 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.4 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.0 0.5 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 0.1 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.0 0.2 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.0 1.1 GO:0051087 chaperone binding(GO:0051087)
0.0 0.2 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.0 11.7 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.2 GO:0016892 tRNA-intron endonuclease activity(GO:0000213) endoribonuclease activity, producing 3'-phosphomonoesters(GO:0016892)
0.0 0.1 GO:0004046 aminoacylase activity(GO:0004046)
0.0 1.0 GO:0060090 binding, bridging(GO:0060090)
0.0 1.3 GO:0009975 cyclase activity(GO:0009975)
0.0 0.2 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.0 0.4 GO:0004096 catalase activity(GO:0004096)
0.0 0.5 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.4 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 0.4 GO:0015198 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.0 0.1 GO:0019825 oxygen binding(GO:0019825)
0.0 0.5 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 0.7 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 0.3 GO:0051011 microtubule minus-end binding(GO:0051011)
0.0 0.6 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 0.5 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.2 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.0 0.1 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.4 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.0 1.0 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.1 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.0 0.2 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 4.7 GO:0008168 methyltransferase activity(GO:0008168)
0.0 0.6 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.2 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.0 0.4 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 1.1 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.2 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.1 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.0 0.3 GO:0071617 lysophospholipid acyltransferase activity(GO:0071617)
0.0 1.3 GO:0008408 3'-5' exonuclease activity(GO:0008408)
0.0 1.3 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.3 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.4 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.9 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.0 0.1 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.0 0.2 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.1 GO:0004824 lysine-tRNA ligase activity(GO:0004824)
0.0 0.3 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.3 GO:0016405 CoA-ligase activity(GO:0016405)
0.0 5.8 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 0.1 GO:0001032 polymerase III regulatory region sequence-specific DNA binding(GO:0000992) RNA polymerase III type 3 promoter sequence-specific DNA binding(GO:0001006) RNA polymerase III regulatory region DNA binding(GO:0001016) RNA polymerase III type 3 promoter DNA binding(GO:0001032)
0.0 0.2 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.0 0.1 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.0 0.1 GO:0036456 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.0 0.3 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.1 GO:0000339 RNA cap binding(GO:0000339)
0.0 0.1 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.0 0.2 GO:0005085 guanyl-nucleotide exchange factor activity(GO:0005085)
0.0 0.1 GO:0004970 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.0 0.0 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.3 GO:0031386 protein tag(GO:0031386)
0.0 0.2 GO:0008308 voltage-gated anion channel activity(GO:0008308)
0.0 0.1 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.0 0.3 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.6 PID AP1 PATHWAY AP-1 transcription factor network
0.2 1.4 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.2 1.3 PID ATM PATHWAY ATM pathway
0.1 0.4 PID HIV NEF PATHWAY HIV-1 Nef: Negative effector of Fas and TNF-alpha
0.1 0.5 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.1 1.0 PID CMYB PATHWAY C-MYB transcription factor network
0.1 0.6 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.7 NABA CORE MATRISOME Ensemble of genes encoding core extracellular matrix including ECM glycoproteins, collagens and proteoglycans
0.1 0.2 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.2 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I
0.0 0.2 PID E2F PATHWAY E2F transcription factor network
0.0 0.0 PID PTP1B PATHWAY Signaling events mediated by PTP1B

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 6.6 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.4 1.2 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.4 1.9 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.3 0.3 REACTOME SIGNALING BY NOTCH1 Genes involved in Signaling by NOTCH1
0.3 1.4 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.3 1.4 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.3 1.9 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.2 0.4 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.2 4.9 REACTOME INFLUENZA VIRAL RNA TRANSCRIPTION AND REPLICATION Genes involved in Influenza Viral RNA Transcription and Replication
0.2 0.8 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.2 1.0 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.2 0.6 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.1 0.4 REACTOME NOD1 2 SIGNALING PATHWAY Genes involved in NOD1/2 Signaling Pathway
0.1 1.5 REACTOME ACTIVATION OF THE PRE REPLICATIVE COMPLEX Genes involved in Activation of the pre-replicative complex
0.1 0.5 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.1 0.4 REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT Genes involved in SLC-mediated transmembrane transport
0.1 0.1 REACTOME TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRONLESS TRANSCRIPT Genes involved in Transport of Mature mRNA Derived from an Intronless Transcript
0.0 0.2 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1