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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT2G35700

Z-value: 0.55

Transcription factors associated with AT2G35700

Gene Symbol Gene ID Gene Info
AT2G35700
AT2G35700 ERF family protein 38

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ERF38arTal_v1_Chr2_+_15005064_150050640.488.9e-03Click!

Activity profile of AT2G35700 motif

Sorted Z-values of AT2G35700 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_15983199 3.44 AT3G44300.1
NIT2
nitrilase 2
Chr3_-_6258426 2.83 AT3G18250.1
AT3G18250
Putative membrane lipoprotein
Chr3_+_18873911 2.78 AT3G50770.1
CML41
calmodulin-like 41
Chr2_-_18781973 2.66 AT2G45570.1
CYP76C2
cytochrome P450, family 76, subfamily C, polypeptide 2
Chr3_-_162905 2.51 AT3G01420.1
DOX1
Peroxidase superfamily protein
Chr1_+_10892445 2.26 AT1G30700.1
AT1G30700
FAD-binding Berberine family protein
Chr5_-_216773 2.14 AT5G01550.1
LECRKA4.2
lectin receptor kinase a4.1
Chr3_-_2699257 2.13 AT3G08860.2
PYD4
PYRIMIDINE 4
Chr5_+_3239617 2.10 AT5G10300.2
MES5
methyl esterase 5
Chr3_-_2699420 2.08 AT3G08860.1
PYD4
PYRIMIDINE 4
Chr1_-_460696 2.07 AT1G02310.1
AT1G02310.2
MAN1
Glycosyl hydrolase superfamily protein
Chr5_+_3239455 2.06 AT5G10300.1
MES5
methyl esterase 5
Chr4_+_10974456 2.05 AT4G20320.2
AT4G20320.4
AT4G20320.3
AT4G20320.1
AT4G20320.5
AT4G20320.6
AT4G20320
CTP synthase family protein
Chr5_-_2176446 2.04 AT5G07010.1
ST2A
sulfotransferase 2A
Chr3_+_9892791 2.03 AT3G26840.1
PES2
Esterase/lipase/thioesterase family protein
Chr5_-_6042938 2.00 AT5G18270.2
AT5G18270.1
ANAC087
NAC domain containing protein 87
Chr2_-_11980003 1.98 AT2G28110.1
FRA8
Exostosin family protein
Chr5_-_23896702 1.98 AT5G59220.2
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
Chr4_-_12018492 1.97 AT4G22920.1
NYE1
non-yellowing 1
Chr4_-_12018643 1.97 AT4G22920.2
NYE1
non-yellowing 1
Chr5_-_23896939 1.94 AT5G59220.1
HAI1
PP2C protein (Clade A protein phosphatases type 2C)
Chr4_+_13653579 1.93 AT4G27260.1
WES1
Auxin-responsive GH3 family protein
Chr5_+_19616066 1.90 AT5G48400.1
AT5G48400.2
ATGLR1.2
Glutamate receptor family protein
Chr4_-_15991536 1.90 AT4G33150.1
AT4G33150.2
AT4G33150
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
Chr4_+_17597110 1.90 AT4G37430.1
CYP91A2
cytochrome P450, family 91, subfamily A, polypeptide 2
Chr1_-_29622445 1.88 AT1G78780.1
AT1G78780.2
AT1G78780.4
AT1G78780
pathogenesis-related family protein
Chr3_-_7999552 1.87 AT3G22560.1
AT3G22560
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr1_-_17076417 1.86 AT1G45145.1
TRX5
thioredoxin H-type 5
Chr2_+_18558885 1.86 AT2G44990.2
AT2G44990.3
AT2G44990.1
CCD7
carotenoid cleavage dioxygenase 7
Chr3_-_1055196 1.86 AT3G04060.1
NAC046
NAC domain containing protein 46
Chr2_+_17251819 1.81 AT2G41380.1
AT2G41380
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_+_22552560 1.76 AT3G60966.1
AT3G60966
RING/U-box superfamily protein
Chr1_-_27837443 1.75 AT1G74020.1
SS2
strictosidine synthase 2
Chr2_+_18577500 1.73 AT2G45040.1
AT2G45040
Matrixin family protein
Chr1_+_1469541 1.73 AT1G05100.1
MAPKKK18
mitogen-activated protein kinase kinase kinase 18
Chr2_+_8097420 1.73 AT2G18690.2
AT2G18690.1
AT2G18690
transmembrane protein
Chr4_-_17494279 1.73 AT4G37150.1
MES9
methyl esterase 9
Chr4_-_15988441 1.71 AT4G33150.3
AT4G33150
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
Chr3_-_23150606 1.71 AT3G62590.1
AT3G62590
alpha/beta-Hydrolases superfamily protein
Chr3_+_18634546 1.68 AT3G50260.1
CEJ1
cooperatively regulated by ethylene and jasmonate 1
Chr2_-_19291632 1.67 AT2G46950.2
AT2G46950.1
CYP709B2
cytochrome P450, family 709, subfamily B, polypeptide 2
Chr3_-_19577141 1.67 AT3G52820.1
PAP22
purple acid phosphatase 22
Chr4_-_15991202 1.66 AT4G33150.4
AT4G33150
lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme
Chr5_+_6826365 1.62 AT5G20230.1
BCB
blue-copper-binding protein
Chr1_-_7534927 1.62 AT1G21520.1
AT1G21520
hypothetical protein
Chr4_-_15573323 1.61 AT4G32250.3
AT4G32250.1
AT4G32250.2
AT4G32250
Protein kinase superfamily protein
Chr3_+_23289243 1.59 AT3G63010.1
GID1B
alpha/beta-Hydrolases superfamily protein
Chr2_+_12871984 1.59 AT2G30140.1
AT2G30140.2
UGT87A2
UDP-Glycosyltransferase superfamily protein
Chr1_+_8720309 1.59 AT1G24600.1
AT1G24600
hypothetical protein
Chr5_+_22460550 1.57 AT5G55410.2
AT5G55410.1
AT5G55410
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_2867203 1.56 AT1G08920.1
AT1G08920.2
AT1G08920.3
ESL1
ERD (early response to dehydration) six-like 1
Chr3_+_3249513 1.55 AT3G10450.3
AT3G10450.2
AT3G10450.1
AT3G10450.4
SCPL7
serine carboxypeptidase-like 7
Chr1_-_23460884 1.54 AT1G63245.1
CLE14
CLAVATA3/ESR-RELATED 14
Chr1_+_29298243 1.54 AT1G77920.1
TGA7
bZIP transcription factor family protein
Chr5_+_5995479 1.53 AT5G18130.2
AT5G18130
transmembrane protein
Chr1_+_6100964 1.52 AT1G17745.1
AT1G17745.2
PGDH
D-3-phosphoglycerate dehydrogenase
Chr1_+_6515373 1.52 AT1G18870.1
AT1G18870.3
ICS2
isochorismate synthase 2
Chr1_+_25473544 1.52 AT1G67920.1
AT1G67920
hypothetical protein
Chr5_+_5995323 1.52 AT5G18130.1
AT5G18130
transmembrane protein
Chr5_-_2079005 1.51 AT5G06720.1
PA2
peroxidase 2
Chr5_+_20130752 1.50 AT5G49600.1
AT5G49600
plant/protein (Protein of unknown function, DUF538)
Chr3_-_20745153 1.49 AT3G55920.1
AT3G55920
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr1_+_9378404 1.46 AT1G27020.1
AT1G27020
plant/protein
Chr2_+_14685170 1.46 AT2G34810.1
AT2G34810
FAD-binding Berberine family protein
Chr3_-_20361560 1.46 AT3G54950.1
pPLAIIIbeta
patatin-like protein 6
Chr1_+_23168767 1.45 AT1G62570.1
FMO GS-OX4
flavin-monooxygenase glucosinolate S-oxygenase 4
Chr4_+_11655562 1.44 AT4G21980.1
AT4G21980.2
APG8A
Ubiquitin-like superfamily protein
Chr1_-_20849054 1.44 AT1G55760.1
AT1G55760
BTB/POZ domain-containing protein
Chr2_-_275002 1.44 AT2G01610.1
AT2G01610
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr5_+_2938193 1.43 AT5G09440.1
EXL4
EXORDIUM like 4
Chr2_-_11800928 1.43 AT2G27660.1
AT2G27660
Cysteine/Histidine-rich C1 domain family protein
Chr3_+_19086344 1.43 AT3G51430.1
AT3G51430.2
YLS2
Calcium-dependent phosphotriesterase superfamily protein
Chr4_+_994726 1.42 AT4G02280.1
SUS3
sucrose synthase 3
Chr1_-_612324 1.42 AT1G02790.1
PGA4
polygalacturonase 4
Chr5_-_5904380 1.41 AT5G17860.2
CAX7
calcium exchanger 7
Chr5_-_5904532 1.40 AT5G17860.1
CAX7
calcium exchanger 7
Chr1_-_27119918 1.40 AT1G72070.1
AT1G72070
Chaperone DnaJ-domain superfamily protein
Chr1_-_5645443 1.39 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
Chr1_-_7086873 1.39 AT1G20440.1
COR47
cold-regulated 47
Chr3_-_6788424 1.39 AT3G19550.1
AT3G19550
glutamate racemase
Chr5_+_8082650 1.39 AT5G23950.2
AT5G23950.1
AT5G23950
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr5_-_18804056 1.39 AT5G46350.1
WRKY8
WRKY DNA-binding protein 8
Chr4_-_10765781 1.38 AT4G19810.1
AT4G19810.2
ChiC
Glycosyl hydrolase family protein with chitinase insertion domain-containing protein
Chr1_-_3323735 1.38 AT1G10140.1
AT1G10140
Uncharacterized conserved protein UCP031279
Chr4_+_7304323 1.38 AT4G12290.2
AT4G12290
Copper amine oxidase family protein
Chr4_+_14065992 1.38 AT4G28460.1
AT4G28460
transmembrane protein
Chr5_-_5759817 1.38 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr4_+_7303985 1.37 AT4G12290.1
AT4G12290
Copper amine oxidase family protein
Chr3_+_25355 1.37 AT3G01080.2
AT3G01080.3
AT3G01080.1
WRKY58
WRKY DNA-binding protein 58
Chr2_-_14863412 1.36 AT2G35300.1
LEA18
Late embryogenesis abundant protein, group 1 protein
Chr3_-_4474364 1.36 AT3G13672.2
AT3G13672.1
AT3G13672
TRAF-like superfamily protein
Chr5_-_26096114 1.35 AT5G65300.1
AT5G65300
hypothetical protein
Chr4_+_7239200 1.35 AT4G12080.1
AHL1
AT-hook motif nuclear-localized protein 1
Chr5_+_2204206 1.35 AT5G07100.5
AT5G07100.3
AT5G07100.4
AT5G07100.2
AT5G07100.1
WRKY26
WRKY DNA-binding protein 26
Chr4_-_11971203 1.34 AT4G22780.1
ACR7
ACT domain repeat 7
Chr5_-_1580875 1.34 AT5G05340.1
PRX52
Peroxidase superfamily protein
Chr4_-_11971357 1.33 AT4G22780.2
ACR7
ACT domain repeat 7
Chr5_+_8202919 1.33 AT5G24200.1
AT5G24200.2
AT5G24200.3
AT5G24200
alpha/beta-Hydrolases superfamily protein
Chr3_-_1956397 1.32 AT3G06420.1
ATG8H
Ubiquitin-like superfamily protein
Chr1_+_4416315 1.32 AT1G12940.1
NRT2.5
nitrate transporter2.5
Chr4_+_7148124 1.32 AT4G11890.3
AT4G11890.1
AT4G11890.4
ARCK1
Protein kinase superfamily protein
Chr5_+_19381519 1.32 AT5G47860.1
AT5G47860
Gut esterase (DUF1350)
Chr5_+_2355759 1.31 AT5G07440.2
AT5G07440.1
GDH2
glutamate dehydrogenase 2
Chr1_+_27132014 1.31 AT1G72120.1
AT1G72120
Major facilitator superfamily protein
Chr5_+_20764096 1.31 AT5G51070.1
ERD1
Clp ATPase
Chr2_-_17806073 1.30 AT2G42790.1
CSY3
citrate synthase 3
Chr3_+_5471735 1.30 AT3G16150.1
ASPGB1
N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
Chr1_+_6515644 1.30 AT1G18870.2
ICS2
isochorismate synthase 2
Chr5_-_18611166 1.29 AT5G45880.1
AT5G45880
Pollen Ole e 1 allergen and extensin family protein
Chr5_-_25813620 1.28 AT5G64570.3
AT5G64570.2
AT5G64570.1
XYL4
beta-D-xylosidase 4
Chr3_+_9685932 1.28 AT3G26470.1
AT3G26470
Powdery mildew resistance protein, RPW8 domain-containing protein
Chr1_+_11945250 1.28 AT1G32960.1
SBT3.3
Subtilase family protein
Chr1_-_3756998 1.28 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
Chr4_-_8123835 1.27 AT4G14090.1
AT4G14090
UDP-Glycosyltransferase superfamily protein
Chr2_-_10127589 1.27 AT2G23790.1
AT2G23790
calcium uniporter (DUF607)
Chr5_+_2355962 1.26 AT5G07440.3
GDH2
glutamate dehydrogenase 2
Chr2_+_15514923 1.26 AT2G36950.1
AT2G36950
Heavy metal transport/detoxification superfamily protein
Chr3_-_9471039 1.26 AT3G25882.1
NIMIN-2
NIM1-interacting 2
Chr3_-_7676519 1.25 AT3G21780.1
UGT71B6
UDP-glucosyl transferase 71B6
Chr3_+_815550 1.25 AT3G03440.1
AT3G03440
ARM repeat superfamily protein
Chr2_-_13929763 1.25 AT2G32830.1
PHT1%3B5
phosphate transporter 1;5
Chr5_-_9247540 1.25 AT5G26340.1
MSS1
Major facilitator superfamily protein
Chr4_+_17440177 1.25 AT4G36990.1
HSF4
heat shock factor 4
Chr4_+_9407611 1.24 AT4G16740.4
AT4G16740.3
AT4G16740.1
TPS03
terpene synthase 03
Chr1_-_17266724 1.22 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
Chr5_-_10213598 1.21 AT5G28237.1
AT5G28237.2
AT5G28237
Pyridoxal-5'-phosphate-dependent enzyme family protein
Chr3_-_7818985 1.21 AT3G22160.1
AT3G22160
VQ motif-containing protein
Chr4_-_14820595 1.20 AT4G30270.1
XTH24
xyloglucan endotransglucosylase/hydrolase 24
Chr1_+_28655208 1.20 AT1G76390.2
AT1G76390.1
PUB43
ARM repeat superfamily protein
Chr1_-_6782216 1.19 AT1G19610.1
PDF1.4
defensin-like protein
Chr1_-_2282828 1.19 AT1G07430.1
HAI2
highly ABA-induced PP2C protein 2
Chr1_-_10184512 1.19 AT1G29160.1
AT1G29160
Dof-type zinc finger DNA-binding family protein
Chr1_-_27119715 1.18 AT1G72070.2
AT1G72070
Chaperone DnaJ-domain superfamily protein
Chr2_+_8998450 1.18 AT2G20920.1
AT2G20920
chaperone (DUF3353)
Chr1_-_10139228 1.17 AT1G29050.1
TBL38
TRICHOME BIREFRINGENCE-LIKE 38
Chr5_+_206432 1.17 AT5G01520.2
AT5G01520.1
AIRP2
RING/U-box superfamily protein
Chr1_-_167842 1.17 AT1G01453.2
AT1G01453
late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
Chr1_+_10897925 1.16 AT1G30720.1
AT1G30720
FAD-binding Berberine family protein
Chr1_+_3945584 1.16 AT1G11700.1
AT1G11700
senescence regulator (Protein of unknown function, DUF584)
Chr5_+_25210301 1.16 AT5G62770.1
AT5G62770
membrane-associated kinase regulator, putative (DUF1645)
Chr1_-_10046552 1.16 AT1G28580.1
AT1G28580.2
AT1G28580
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_+_4355138 1.15 AT3G13400.2
sks13
SKU5 similar 13
Chr3_+_4036945 1.15 AT3G12700.1
AT3G12700.3
AT3G12700.2
NANA
Eukaryotic aspartyl protease family protein
Chr3_-_21303230 1.15 AT3G57540.1
AT3G57540
Remorin family protein
Chr4_-_10182264 1.15 AT4G18425.1
AT4G18425
transmembrane protein, putative (DUF679)
Chr1_+_26038905 1.14 AT1G69260.1
AFP1
ABI five binding protein
Chr2_-_17263017 1.14 AT2G41410.1
AT2G41410
Calcium-binding EF-hand family protein
Chr3_-_19165322 1.14 AT3G51660.1
AT3G51660
Tautomerase/MIF superfamily protein
Chr4_+_9385119 1.14 AT4G16670.2
AT4G16670.3
AT4G16670.1
AT4G16670
auxin canalization protein (DUF828)
Chr3_-_11400332 1.13 AT3G29590.1
AT5MAT
HXXXD-type acyl-transferase family protein
Chr5_-_2090430 1.13 AT5G06760.1
LEA4-5
Late Embryogenesis Abundant 4-5
Chr3_+_4354923 1.12 AT3G13400.1
sks13
SKU5 similar 13
Chr2_-_761013 1.12 AT2G02710.2
AT2G02710.3
AT2G02710.4
AT2G02710.1
PLPB
PAS/LOV protein B
Chr4_+_12741032 1.12 AT4G24690.1
NBR1
ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein
Chr3_+_22925742 1.12 AT3G61900.1
AT3G61900
SAUR-like auxin-responsive protein family
Chr2_-_13613573 1.11 AT2G31990.1
AT2G31990.3
AT2G31990.2
AT2G31990
Exostosin family protein
Chr2_-_9266393 1.11 AT2G21660.2
GRP7
cold, circadian rhythm, and rna binding 2
Chr1_-_4305907 1.11 AT1G12640.1
LPLAT1
MBOAT (membrane bound O-acyl transferase) family protein
Chr3_+_16466144 1.10 AT3G45010.1
scpl48
serine carboxypeptidase-like 48
Chr2_-_9266557 1.10 AT2G21660.1
GRP7
cold, circadian rhythm, and rna binding 2
Chr1_-_24362054 1.09 AT1G65520.1
ECI1
delta(3), delta(2)-enoyl CoA isomerase 1
Chr5_+_5209717 1.09 AT5G15960.1
KIN1
stress-responsive protein (KIN1) / stress-induced protein (KIN1)
Chr1_-_29623171 1.09 AT1G78780.5
AT1G78780
pathogenesis-related family protein
Chr4_+_17631500 1.08 AT4G37520.1
AT4G37520.2
AT4G37520
Peroxidase superfamily protein
Chr5_-_15279317 1.08 AT5G38240.1
AT5G38240.2
AT5G38240.3
AT5G38240
Protein kinase family protein
Chr3_-_1039603 1.08 AT3G04010.1
AT3G04010
O-Glycosyl hydrolases family 17 protein
Chr1_+_3154390 1.08 AT1G09740.1
AT1G09740.2
AT1G09740
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr2_+_8647721 1.08 AT2G20030.1
AT2G20030
RING/U-box superfamily protein
Chr1_-_168088 1.07 AT1G01453.1
AT1G01453
late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
Chr4_-_9421857 1.07 AT4G16750.1
AT4G16750
Integrase-type DNA-binding superfamily protein
Chr1_-_575085 1.07 AT1G02660.1
AT1G02660
alpha/beta-Hydrolases superfamily protein
Chr5_-_2529421 1.07 AT5G07920.1
AT5G07920.3
AT5G07920.2
DGK1
diacylglycerol kinase1
Chr5_-_315405 1.06 AT5G01820.1
SR1
serine/threonine protein kinase 1
Chr5_+_20891163 1.06 AT5G51440.1
AT5G51440
HSP20-like chaperones superfamily protein
Chr5_+_15634444 1.06 AT5G39050.1
PMAT1
HXXXD-type acyl-transferase family protein
Chr3_+_9541483 1.06 AT3G26110.1
AT3G26110
Anther-specific protein agp1-like protein
Chr3_+_19875375 1.06 AT3G53600.1
AT3G53600
C2H2-type zinc finger family protein
Chr5_+_7138762 1.05 AT5G21020.2
AT5G21020
transmembrane protein
Chr1_-_29623337 1.04 AT1G78780.3
AT1G78780
pathogenesis-related family protein
Chr1_-_977761 1.04 AT1G03850.1
AT1G03850.2
AT1G03850.3
GRXS13
Glutaredoxin family protein
Chr5_+_25322975 1.04 AT5G63130.2
AT5G63130.1
AT5G63130
Octicosapeptide/Phox/Bem1p family protein
Chr4_+_15383633 1.04 AT4G31800.2
WRKY18
WRKY DNA-binding protein 18
Chr1_-_10071108 1.04 AT1G28650.1
AT1G28650
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_-_9075631 1.04 AT2G21180.1
AT2G21180
transmembrane protein
Chr2_-_476650 1.04 AT2G02010.1
GAD4
glutamate decarboxylase 4
Chr5_+_8541713 1.04 AT5G24860.3
AT5G24860.1
FPF1
flowering promoting factor 1
Chr5_+_23067828 1.04 AT5G57010.1
AT5G57010
calmodulin-binding family protein
Chr5_+_26864846 1.04 AT5G67340.2
AT5G67340
ARM repeat superfamily protein
Chr4_+_15383197 1.03 AT4G31800.3
WRKY18
WRKY DNA-binding protein 18
Chr3_-_22959018 1.03 AT3G61990.1
OMTF3
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_6338209 1.02 AT5G18980.1
AT5G18980.2
AT5G18980
ARM repeat superfamily protein
Chr4_-_17041131 1.02 AT4G36010.2
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr5_+_5560607 1.02 AT5G16910.1
CSLD2
cellulose-synthase like D2
Chr3_-_21285941 1.02 AT3G57510.1
ADPG1
Pectin lyase-like superfamily protein
Chr2_+_7516330 1.01 AT2G17290.2
AT2G17290.1
CPK6
Calcium-dependent protein kinase family protein
Chr4_-_17041326 1.01 AT4G36010.1
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr1_+_25865471 1.01 AT1G68820.1
AT1G68820.3
AT1G68820.2
AT1G68820
Transmembrane Fragile-X-F-associated protein
Chr1_-_11719988 1.01 AT1G32450.1
NRT1.5
nitrate transporter 1.5
Chr3_+_5258715 1.01 AT3G15534.1
AT3G15534
hypothetical protein
Chr3_-_6826585 1.01 AT3G19660.1
AT3G19660
hypothetical protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G35700

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 4.2 GO:0016139 glycoside catabolic process(GO:0016139)
0.9 3.6 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.9 3.4 GO:0097438 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.6 1.9 GO:0016118 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.6 1.7 GO:0044236 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.6 1.7 GO:0010446 response to alkaline pH(GO:0010446)
0.5 3.8 GO:0006597 spermine biosynthetic process(GO:0006597)
0.5 2.1 GO:0019322 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.5 1.5 GO:0015802 basic amino acid transport(GO:0015802)
0.5 1.5 GO:0002215 defense response to nematode(GO:0002215)
0.5 2.9 GO:0071732 cellular response to nitric oxide(GO:0071732)
0.4 2.2 GO:0010271 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.4 1.3 GO:0016540 protein autoprocessing(GO:0016540)
0.4 1.7 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.4 1.3 GO:0043290 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.4 2.0 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.4 3.4 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.4 1.5 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.3 1.0 GO:0044277 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.3 3.4 GO:0050691 regulation of defense response to virus by host(GO:0050691)
0.3 1.0 GO:0010288 response to lead ion(GO:0010288)
0.3 1.0 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
0.3 1.3 GO:0070509 calcium ion import(GO:0070509)
0.3 1.2 GO:0016098 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.3 0.9 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.3 1.5 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.3 0.9 GO:0009945 radial axis specification(GO:0009945)
0.3 0.6 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.3 1.7 GO:0006145 purine nucleobase catabolic process(GO:0006145)
0.3 0.9 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.3 2.2 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.3 1.8 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.3 0.8 GO:0018119 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.3 3.3 GO:0046149 chlorophyll catabolic process(GO:0015996) pigment catabolic process(GO:0046149)
0.2 0.7 GO:0050000 chromosome localization(GO:0050000) protein heterooligomerization(GO:0051291) protein localization to nuclear envelope(GO:0090435)
0.2 2.5 GO:0015749 monosaccharide transport(GO:0015749)
0.2 1.9 GO:1902456 regulation of stomatal opening(GO:1902456)
0.2 0.7 GO:0034486 vacuolar transmembrane transport(GO:0034486)
0.2 0.9 GO:0033306 phytol metabolic process(GO:0033306)
0.2 8.7 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.2 2.2 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.2 0.9 GO:0010480 microsporocyte differentiation(GO:0010480)
0.2 2.2 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.2 1.1 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.2 1.1 GO:0019323 pentose catabolic process(GO:0019323)
0.2 1.0 GO:0051289 protein homotetramerization(GO:0051289)
0.2 0.4 GO:0016241 regulation of macroautophagy(GO:0016241)
0.2 1.9 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.2 0.8 GO:0045332 phospholipid translocation(GO:0045332)
0.2 0.6 GO:0010353 response to trehalose(GO:0010353)
0.2 1.2 GO:0015846 polyamine transport(GO:0015846)
0.2 0.6 GO:0046740 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.2 2.9 GO:0009697 salicylic acid biosynthetic process(GO:0009697)
0.2 0.2 GO:0015744 succinate transport(GO:0015744)
0.2 0.4 GO:0070542 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.2 0.7 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.2 2.6 GO:0015706 nitrate transport(GO:0015706)
0.2 0.5 GO:1990258 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.2 0.5 GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process(GO:1990116)
0.2 2.2 GO:0048317 seed morphogenesis(GO:0048317)
0.2 0.7 GO:0071836 nectar secretion(GO:0071836)
0.2 2.1 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.2 0.5 GO:0071569 protein ufmylation(GO:0071569)
0.2 1.4 GO:1901002 positive regulation of response to salt stress(GO:1901002)
0.2 2.7 GO:0006538 glutamate catabolic process(GO:0006538)
0.2 0.5 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.2 3.0 GO:0010555 response to mannitol(GO:0010555)
0.2 0.2 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.2 0.6 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.2 0.5 GO:0046203 spermidine catabolic process(GO:0046203)
0.2 1.7 GO:0070370 cellular heat acclimation(GO:0070370)
0.2 0.5 GO:0055089 fatty acid homeostasis(GO:0055089)
0.2 0.9 GO:0006624 vacuolar protein processing(GO:0006624)
0.2 0.5 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.2 1.2 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.2 0.8 GO:0006116 NADH oxidation(GO:0006116)
0.2 2.6 GO:0019374 galactolipid metabolic process(GO:0019374)
0.1 0.4 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.1 1.9 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.1 0.6 GO:0019477 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.1 0.4 GO:0009264 deoxyribonucleotide catabolic process(GO:0009264)
0.1 0.4 GO:0032196 transposition(GO:0032196)
0.1 6.4 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.1 0.5 GO:1902916 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.1 0.5 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.1 0.4 GO:1904062 positive regulation of potassium ion transport(GO:0043268) regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.1 2.3 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.1 0.4 GO:0002188 translation reinitiation(GO:0002188)
0.1 2.0 GO:0080027 response to herbivore(GO:0080027)
0.1 1.3 GO:0052317 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.1 0.7 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 1.6 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.4 GO:0019368 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.1 6.8 GO:0002239 response to oomycetes(GO:0002239)
0.1 0.5 GO:0030259 lipid glycosylation(GO:0030259)
0.1 0.3 GO:0040030 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.1 0.2 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
0.1 1.2 GO:0016584 nucleosome positioning(GO:0016584)
0.1 0.3 GO:0042787 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.1 0.6 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.1 0.7 GO:0034087 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.1 0.3 GO:0010203 response to very low fluence red light stimulus(GO:0010203)
0.1 0.7 GO:0032781 positive regulation of ATPase activity(GO:0032781)
0.1 1.1 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.1 0.4 GO:0046786 viral replication complex formation and maintenance(GO:0046786)
0.1 0.8 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.1 0.2 GO:0009866 induced systemic resistance, ethylene mediated signaling pathway(GO:0009866)
0.1 0.5 GO:0080024 indolebutyric acid metabolic process(GO:0080024) response to indolebutyric acid(GO:0080026)
0.1 0.3 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 1.7 GO:0031408 oxylipin biosynthetic process(GO:0031408)
0.1 0.9 GO:0006670 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.1 0.6 GO:0080190 lateral growth(GO:0080190)
0.1 1.2 GO:0031126 snoRNA 3'-end processing(GO:0031126)
0.1 0.3 GO:0098534 centrosome cycle(GO:0007098) centriole replication(GO:0007099) centrosome organization(GO:0051297) centrosome duplication(GO:0051298) centriole assembly(GO:0098534)
0.1 0.7 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.1 0.3 GO:0006094 gluconeogenesis(GO:0006094)
0.1 0.3 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.1 2.4 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.1 0.6 GO:2000757 negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.1 0.2 GO:0008215 spermine metabolic process(GO:0008215)
0.1 1.1 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.1 0.6 GO:0006591 ornithine metabolic process(GO:0006591)
0.1 0.3 GO:0045740 positive regulation of DNA replication(GO:0045740)
0.1 1.9 GO:0009593 detection of chemical stimulus(GO:0009593)
0.1 0.3 GO:0080182 histone H3-K4 trimethylation(GO:0080182)
0.1 0.4 GO:0034497 protein localization to pre-autophagosomal structure(GO:0034497)
0.1 0.2 GO:0010507 negative regulation of autophagy(GO:0010507)
0.1 2.6 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.1 0.4 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.1 0.5 GO:0006825 copper ion transport(GO:0006825)
0.1 0.7 GO:0015914 phospholipid transport(GO:0015914)
0.1 0.4 GO:0048530 fruit morphogenesis(GO:0048530)
0.1 0.8 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.1 0.3 GO:0030308 negative regulation of cell growth(GO:0030308)
0.1 0.4 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.1 3.3 GO:0034620 cellular response to unfolded protein(GO:0034620)
0.1 0.6 GO:0045899 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.1 0.8 GO:0031537 regulation of anthocyanin metabolic process(GO:0031537)
0.1 0.5 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.1 0.6 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 0.8 GO:0043902 positive regulation of multi-organism process(GO:0043902)
0.1 2.0 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.1 0.5 GO:0006283 transcription-coupled nucleotide-excision repair(GO:0006283)
0.1 1.4 GO:0051260 protein homooligomerization(GO:0051260)
0.1 0.8 GO:0070828 heterochromatin organization(GO:0070828)
0.1 0.6 GO:0033617 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.1 0.3 GO:0016578 histone deubiquitination(GO:0016578)
0.1 1.9 GO:0006914 autophagy(GO:0006914)
0.1 0.3 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.1 0.6 GO:0042182 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.1 0.9 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 0.2 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.1 0.3 GO:0060919 auxin influx(GO:0060919)
0.1 0.3 GO:0031440 regulation of mRNA 3'-end processing(GO:0031440) regulation of mRNA polyadenylation(GO:1900363)
0.1 1.5 GO:0043666 regulation of phosphoprotein phosphatase activity(GO:0043666)
0.1 0.2 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.1 0.5 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.1 0.2 GO:1901654 response to ketone(GO:1901654)
0.1 0.1 GO:0031023 microtubule organizing center organization(GO:0031023)
0.1 2.7 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.1 0.3 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.1 0.5 GO:0044375 regulation of peroxisome size(GO:0044375)
0.1 1.9 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.1 0.6 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 12.8 GO:0071456 cellular response to hypoxia(GO:0071456)
0.1 0.5 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 0.2 GO:0043545 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) metal incorporation into metallo-molybdopterin complex(GO:0042040) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.1 0.6 GO:0000578 embryonic axis specification(GO:0000578)
0.1 0.6 GO:0050777 negative regulation of immune response(GO:0050777)
0.1 0.2 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 1.4 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.1 0.3 GO:0016115 terpenoid catabolic process(GO:0016115)
0.1 0.2 GO:0034247 snoRNA splicing(GO:0034247)
0.1 1.1 GO:1902644 abscisic acid metabolic process(GO:0009687) apocarotenoid metabolic process(GO:0043288) tertiary alcohol metabolic process(GO:1902644)
0.1 0.3 GO:0010047 fruit dehiscence(GO:0010047)
0.1 1.3 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.1 0.5 GO:0006290 pyrimidine dimer repair(GO:0006290)
0.1 0.2 GO:0010219 regulation of vernalization response(GO:0010219)
0.1 2.0 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.1 0.6 GO:0045116 protein neddylation(GO:0045116)
0.1 0.4 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.1 1.6 GO:0010286 heat acclimation(GO:0010286)
0.1 0.5 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.1 1.5 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.1 0.7 GO:0010076 maintenance of floral meristem identity(GO:0010076)
0.0 3.4 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.5 GO:0002213 defense response to insect(GO:0002213)
0.0 0.3 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.0 0.2 GO:0016074 snoRNA metabolic process(GO:0016074)
0.0 0.3 GO:0009187 cyclic nucleotide metabolic process(GO:0009187)
0.0 1.3 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.0 0.5 GO:0009610 response to symbiotic fungus(GO:0009610)
0.0 0.2 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.0 0.4 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.0 0.3 GO:0009625 response to insect(GO:0009625)
0.0 0.7 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.0 1.4 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 0.4 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.0 0.2 GO:0051096 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0 0.3 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.0 0.2 GO:0060260 regulation of transcription initiation from RNA polymerase II promoter(GO:0060260) positive regulation of transcription initiation from RNA polymerase II promoter(GO:0060261) positive regulation of DNA-templated transcription, initiation(GO:2000144)
0.0 0.4 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 0.3 GO:1902074 response to salt(GO:1902074)
0.0 0.5 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.0 1.8 GO:0045732 positive regulation of protein catabolic process(GO:0045732)
0.0 0.2 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.0 0.2 GO:0090342 cell aging(GO:0007569) regulation of cell aging(GO:0090342)
0.0 0.2 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.0 0.2 GO:0006552 leucine catabolic process(GO:0006552)
0.0 0.3 GO:0051452 vacuolar acidification(GO:0007035) intracellular pH reduction(GO:0051452)
0.0 0.3 GO:0016925 protein sumoylation(GO:0016925)
0.0 1.0 GO:0051085 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.0 0.3 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.1 GO:0000012 single strand break repair(GO:0000012)
0.0 0.3 GO:0042026 protein refolding(GO:0042026)
0.0 1.2 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 2.4 GO:0009738 abscisic acid-activated signaling pathway(GO:0009738)
0.0 0.4 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.9 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 1.1 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.5 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.1 GO:0010117 photoprotection(GO:0010117)
0.0 0.5 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.0 0.4 GO:0060321 acceptance of pollen(GO:0060321)
0.0 0.4 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 3.3 GO:0010200 response to chitin(GO:0010200)
0.0 0.1 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.0 0.8 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.2 GO:0010152 pollen maturation(GO:0010152)
0.0 0.6 GO:0051781 positive regulation of cell division(GO:0051781)
0.0 2.4 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.1 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.0 0.1 GO:0052543 callose deposition in cell wall(GO:0052543)
0.0 1.2 GO:0034605 cellular response to heat(GO:0034605)
0.0 1.2 GO:0042430 indole-containing compound metabolic process(GO:0042430)
0.0 0.4 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.6 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.0 0.2 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.0 0.1 GO:0018279 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.0 0.4 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.0 0.3 GO:0009901 anther dehiscence(GO:0009901)
0.0 0.5 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.0 GO:0006883 cellular sodium ion homeostasis(GO:0006883) vacuolar sequestering(GO:0043181)
0.0 0.2 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.0 0.4 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.4 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.1 GO:0006071 glycerol metabolic process(GO:0006071)
0.0 0.1 GO:0006285 base-excision repair, AP site formation(GO:0006285)
0.0 1.4 GO:0034976 response to endoplasmic reticulum stress(GO:0034976)
0.0 0.3 GO:0017157 regulation of exocytosis(GO:0017157) regulation of secretion(GO:0051046) regulation of secretion by cell(GO:1903530)
0.0 1.0 GO:0071370 cellular response to gibberellin stimulus(GO:0071370)
0.0 0.5 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 2.1 GO:0006090 pyruvate metabolic process(GO:0006090)
0.0 4.7 GO:0010228 vegetative to reproductive phase transition of meristem(GO:0010228)
0.0 0.3 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)
0.0 0.7 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 0.5 GO:0006298 mismatch repair(GO:0006298)
0.0 0.3 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0 1.2 GO:0006888 ER to Golgi vesicle-mediated transport(GO:0006888)
0.0 0.8 GO:0018394 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.0 0.2 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.2 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.0 0.2 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.3 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 0.2 GO:0016554 cytidine to uridine editing(GO:0016554)
0.0 0.5 GO:0055046 microgametogenesis(GO:0055046)
0.0 0.2 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.2 GO:0010078 maintenance of root meristem identity(GO:0010078)
0.0 1.9 GO:0009751 response to salicylic acid(GO:0009751)
0.0 0.8 GO:0016144 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.0 0.3 GO:0009682 induced systemic resistance(GO:0009682)
0.0 1.0 GO:0006972 hyperosmotic response(GO:0006972)
0.0 0.1 GO:0006449 regulation of translational termination(GO:0006449)
0.0 0.7 GO:0042023 DNA endoreduplication(GO:0042023)
0.0 0.1 GO:0097468 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.0 0.3 GO:0015833 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.0 0.0 GO:1901562 response to paraquat(GO:1901562)
0.0 0.3 GO:0006020 inositol metabolic process(GO:0006020)
0.0 0.6 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.0 0.2 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.3 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 0.4 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.3 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.1 GO:0008216 spermidine metabolic process(GO:0008216)
0.0 0.5 GO:0006383 transcription from RNA polymerase III promoter(GO:0006383)
0.0 0.1 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 6.6 GO:0016567 protein ubiquitination(GO:0016567)
0.0 0.2 GO:0060966 regulation of gene silencing by RNA(GO:0060966)
0.0 0.2 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.0 0.9 GO:0008037 cell recognition(GO:0008037) recognition of pollen(GO:0048544)
0.0 0.2 GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.0 1.9 GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process(GO:0043161)
0.0 3.4 GO:0016311 dephosphorylation(GO:0016311)
0.0 4.1 GO:0006366 transcription from RNA polymerase II promoter(GO:0006366)
0.0 0.1 GO:0030322 stabilization of membrane potential(GO:0030322)
0.0 1.4 GO:0051603 proteolysis involved in cellular protein catabolic process(GO:0051603)
0.0 0.1 GO:0046493 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.0 0.2 GO:0080156 mitochondrial mRNA modification(GO:0080156)
0.0 0.3 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.0 0.6 GO:0072329 monocarboxylic acid catabolic process(GO:0072329)
0.0 0.0 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.0 0.1 GO:0006097 glyoxylate cycle(GO:0006097)
0.0 0.1 GO:0000919 cell plate assembly(GO:0000919)
0.0 0.3 GO:0019674 NAD metabolic process(GO:0019674)
0.0 0.5 GO:0009247 glycolipid biosynthetic process(GO:0009247)
0.0 0.6 GO:0010431 seed maturation(GO:0010431)
0.0 0.1 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.8 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 0.1 GO:0050826 response to freezing(GO:0050826)
0.0 1.8 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.0 0.4 GO:0019722 calcium-mediated signaling(GO:0019722)
0.0 0.2 GO:0000028 ribosomal small subunit assembly(GO:0000028)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.3 GO:0034703 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.4 2.3 GO:0005776 autophagosome(GO:0005776)
0.4 1.1 GO:0009514 glyoxysome(GO:0009514)
0.3 2.2 GO:0005784 Sec61 translocon complex(GO:0005784)
0.3 0.5 GO:0034457 Mpp10 complex(GO:0034457)
0.3 3.9 GO:0005801 cis-Golgi network(GO:0005801)
0.2 0.7 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.2 1.4 GO:0016363 nuclear matrix(GO:0016363)
0.2 0.5 GO:1990112 RQC complex(GO:1990112)
0.2 0.7 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.2 1.0 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.2 0.8 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.2 1.4 GO:0017119 Golgi transport complex(GO:0017119)
0.1 0.6 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.1 2.4 GO:0031970 organelle envelope lumen(GO:0031970)
0.1 1.1 GO:0000813 ESCRT I complex(GO:0000813)
0.1 0.7 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.1 0.2 GO:0005640 nuclear outer membrane(GO:0005640)
0.1 2.6 GO:0031012 extracellular matrix(GO:0031012)
0.1 1.1 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.1 0.8 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.1 1.0 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.6 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.1 1.4 GO:0000109 nucleotide-excision repair complex(GO:0000109)
0.1 0.4 GO:0031932 TORC2 complex(GO:0031932)
0.1 0.3 GO:0005814 centrosome(GO:0005813) centriole(GO:0005814)
0.1 0.5 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.1 2.2 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.1 0.4 GO:0030286 dynein complex(GO:0030286)
0.1 0.4 GO:0072588 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.1 0.5 GO:0005845 mRNA cap binding complex(GO:0005845)
0.1 0.7 GO:1902562 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.1 0.5 GO:0031371 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 0.6 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.1 0.6 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 0.4 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 0.7 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.1 0.2 GO:0032301 MutSalpha complex(GO:0032301)
0.1 2.3 GO:1903293 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.1 1.0 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.1 2.8 GO:0005764 lysosome(GO:0005764)
0.1 0.3 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.1 0.4 GO:0035145 exon-exon junction complex(GO:0035145)
0.1 0.2 GO:0005655 nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.1 0.4 GO:0034045 pre-autophagosomal structure membrane(GO:0034045)
0.1 0.4 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 0.2 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.1 0.6 GO:0005844 polysome(GO:0005844)
0.1 0.9 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.1 1.8 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.1 0.8 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.1 1.1 GO:0030118 clathrin coat(GO:0030118)
0.1 0.2 GO:0030897 HOPS complex(GO:0030897)
0.1 1.0 GO:0000792 heterochromatin(GO:0000792)
0.1 0.6 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.1 0.4 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 0.5 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.0 0.1 GO:0031080 nuclear pore outer ring(GO:0031080)
0.0 0.5 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.7 GO:0035097 histone methyltransferase complex(GO:0035097)
0.0 5.6 GO:0042025 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 0.7 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.0 0.2 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.0 5.0 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.4 GO:0030686 90S preribosome(GO:0030686)
0.0 6.4 GO:0000325 plant-type vacuole(GO:0000325)
0.0 0.7 GO:0051286 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 0.7 GO:0044452 nucleolar part(GO:0044452)
0.0 0.2 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.0 0.1 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.0 0.3 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.2 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 0.5 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 0.3 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.4 GO:0005682 U5 snRNP(GO:0005682)
0.0 0.3 GO:0010445 nuclear dicing body(GO:0010445)
0.0 0.2 GO:0071012 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.0 0.3 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.4 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.2 GO:0000124 SAGA complex(GO:0000124)
0.0 0.2 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.0 2.0 GO:0005635 nuclear envelope(GO:0005635)
0.0 0.2 GO:0005675 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.0 0.3 GO:0000815 ESCRT III complex(GO:0000815)
0.0 2.8 GO:0005681 spliceosomal complex(GO:0005681)
0.0 0.3 GO:0098799 outer mitochondrial membrane protein complex(GO:0098799)
0.0 0.2 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 1.2 GO:0098687 chromosomal region(GO:0098687)
0.0 0.1 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 0.4 GO:0031358 intrinsic component of plastid outer membrane(GO:0031354) integral component of plastid outer membrane(GO:0031355) intrinsic component of chloroplast outer membrane(GO:0031358) integral component of chloroplast outer membrane(GO:0031359)
0.0 1.0 GO:0005819 spindle(GO:0005819)
0.0 1.2 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.3 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 1.0 GO:0045271 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.3 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 2.7 GO:0000151 ubiquitin ligase complex(GO:0000151)
0.0 0.3 GO:0032040 small-subunit processome(GO:0032040)
0.0 1.0 GO:0005615 extracellular space(GO:0005615)
0.0 0.7 GO:0090406 pollen tube(GO:0090406)
0.0 0.2 GO:0045283 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.0 1.1 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 0.5 GO:0016592 mediator complex(GO:0016592)
0.0 0.2 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.1 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 4.9 GO:0005774 vacuolar membrane(GO:0005774)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 4.2 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.9 2.8 GO:0008909 isochorismate synthase activity(GO:0008909)
0.9 2.6 GO:0004353 glutamate dehydrogenase [NAD(P)+] activity(GO:0004353)
0.8 3.8 GO:0016768 spermine synthase activity(GO:0016768)
0.7 2.2 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.7 2.8 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.6 1.9 GO:0010331 gibberellin binding(GO:0010331)
0.6 3.4 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.6 2.2 GO:0052578 alpha-farnesene synthase activity(GO:0052578)
0.5 2.0 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.5 1.4 GO:0019779 Atg8 ligase activity(GO:0019776) Atg8 activating enzyme activity(GO:0019779)
0.4 2.2 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.4 1.3 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.4 1.3 GO:0015292 uniporter activity(GO:0015292)
0.4 2.0 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.4 1.5 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.4 2.6 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.4 4.0 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.4 1.4 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.4 1.1 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.3 1.0 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.3 1.0 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.3 2.3 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.3 1.0 GO:0052635 C-20 gibberellin 2-beta-dioxygenase activity(GO:0052635)
0.3 1.6 GO:0015116 sulfate transmembrane transporter activity(GO:0015116)
0.3 0.9 GO:0003995 acyl-CoA dehydrogenase activity(GO:0003995)
0.3 0.9 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.3 0.9 GO:0008481 sphinganine kinase activity(GO:0008481)
0.3 2.3 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.3 1.4 GO:0003680 AT DNA binding(GO:0003680)
0.3 0.8 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.3 1.3 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.3 0.8 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.2 1.2 GO:0050551 (E)-beta-ocimene synthase activity(GO:0034768) myrcene synthase activity(GO:0050551)
0.2 1.2 GO:0005355 glucose transmembrane transporter activity(GO:0005355)
0.2 1.0 GO:0032791 lead ion binding(GO:0032791)
0.2 2.0 GO:0009011 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.2 1.2 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.2 1.7 GO:0004834 tryptophan synthase activity(GO:0004834)
0.2 1.2 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.2 2.1 GO:0071617 lysophospholipid acyltransferase activity(GO:0071617)
0.2 0.7 GO:0070678 preprotein binding(GO:0070678)
0.2 1.6 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.2 0.9 GO:0003935 GTP cyclohydrolase II activity(GO:0003935) 3,4-dihydroxy-2-butanone-4-phosphate synthase activity(GO:0008686)
0.2 0.7 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.2 2.6 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.2 1.1 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.2 0.6 GO:0008936 nicotinamidase activity(GO:0008936)
0.2 1.0 GO:0030371 translation repressor activity(GO:0030371)
0.2 1.2 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.2 2.0 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.2 0.2 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.2 0.9 GO:0033897 ribonuclease T2 activity(GO:0033897)
0.2 2.0 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.2 0.5 GO:1990259 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.2 2.5 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.2 3.0 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.2 1.2 GO:0004031 aldehyde oxidase activity(GO:0004031)
0.2 1.7 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.2 0.8 GO:0004322 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.2 0.6 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.2 0.5 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.2 1.2 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.1 2.0 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.1 1.7 GO:0051879 Hsp90 protein binding(GO:0051879)
0.1 1.9 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.1 0.6 GO:0016748 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.1 1.0 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.8 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.1 0.7 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 0.9 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.1 1.5 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.1 0.5 GO:0016531 copper chaperone activity(GO:0016531)
0.1 0.6 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.1 1.4 GO:0008061 chitin binding(GO:0008061)
0.1 0.8 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.1 0.4 GO:0019781 NEDD8 activating enzyme activity(GO:0019781)
0.1 1.1 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.1 0.3 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.1 0.5 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.1 0.8 GO:0080025 phosphatidylinositol-3,5-bisphosphate binding(GO:0080025)
0.1 2.2 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.1 0.4 GO:0031516 far-red light photoreceptor activity(GO:0031516)
0.1 1.4 GO:0002020 protease binding(GO:0002020)
0.1 2.4 GO:0097602 cullin family protein binding(GO:0097602)
0.1 0.7 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.1 1.4 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 0.4 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.1 1.1 GO:0016161 beta-amylase activity(GO:0016161)
0.1 11.4 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.1 1.4 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.4 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.1 0.6 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.1 0.6 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.1 0.6 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.4 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.1 0.4 GO:0051959 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.1 1.6 GO:0005504 fatty acid binding(GO:0005504)
0.1 1.0 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.1 1.4 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 0.4 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.3 GO:0004113 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.1 2.0 GO:0008066 glutamate receptor activity(GO:0008066)
0.1 0.6 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.1 0.7 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 0.6 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.1 0.3 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.1 1.2 GO:0031491 nucleosome binding(GO:0031491)
0.1 0.5 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.1 0.5 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.1 9.5 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 0.4 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.1 0.4 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.3 GO:0001671 ATPase activator activity(GO:0001671)
0.1 1.1 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.1 0.9 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.1 0.1 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 1.4 GO:0008146 sulfotransferase activity(GO:0008146)
0.1 4.7 GO:0032182 ubiquitin-like protein binding(GO:0032182) ubiquitin binding(GO:0043130)
0.1 0.2 GO:0032143 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.1 0.5 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.9 GO:0052742 phosphatidylinositol kinase activity(GO:0052742)
0.1 0.9 GO:0017025 TBP-class protein binding(GO:0017025)
0.1 4.5 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.1 0.4 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.1 0.4 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.1 0.3 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 0.4 GO:0009884 cytokinin receptor activity(GO:0009884)
0.1 0.6 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 0.7 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 0.5 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 0.4 GO:0047893 flavonol 3-O-glucosyltransferase activity(GO:0047893) daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.1 0.9 GO:0090599 alpha-glucosidase activity(GO:0090599)
0.1 0.2 GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity(GO:0008534)
0.1 0.4 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.1 0.5 GO:0043995 histone acetyltransferase activity (H4-K5 specific)(GO:0043995)
0.1 0.3 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.1 2.5 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.1 0.7 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.1 0.4 GO:0016208 AMP binding(GO:0016208)
0.1 0.3 GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity(GO:0035242)
0.1 0.4 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 1.9 GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor(GO:0016671)
0.1 7.8 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.1 0.5 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.1 3.3 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.1 1.2 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.2 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.0 0.7 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 1.3 GO:0080044 quercetin 7-O-glucosyltransferase activity(GO:0080044)
0.0 2.6 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 0.3 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.5 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.0 0.3 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 0.3 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 1.4 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.5 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.1 GO:0045430 chalcone isomerase activity(GO:0045430)
0.0 0.5 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 0.5 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.0 0.2 GO:0038199 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 0.2 GO:0048038 quinone binding(GO:0048038)
0.0 0.5 GO:0008252 nucleotidase activity(GO:0008252)
0.0 0.3 GO:0030151 molybdenum ion binding(GO:0030151)
0.0 0.2 GO:0016843 amine-lyase activity(GO:0016843)
0.0 0.4 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.0 0.2 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.0 3.3 GO:0003724 RNA helicase activity(GO:0003724)
0.0 0.5 GO:0051787 misfolded protein binding(GO:0051787)
0.0 1.9 GO:0036442 hydrogen-exporting ATPase activity(GO:0036442)
0.0 0.6 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.0 0.1 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.0 0.9 GO:0031386 protein tag(GO:0031386)
0.0 0.1 GO:0010296 prenylcysteine methylesterase activity(GO:0010296)
0.0 8.4 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.0 0.2 GO:0016676 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 0.3 GO:1901981 phosphatidylinositol phosphate binding(GO:1901981)
0.0 1.4 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 1.6 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.0 0.5 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.3 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.4 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.4 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.8 GO:0015662 ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism(GO:0015662)
0.0 3.7 GO:0003682 chromatin binding(GO:0003682)
0.0 0.6 GO:0030276 clathrin binding(GO:0030276)
0.0 0.1 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.5 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.0 0.8 GO:0005496 steroid binding(GO:0005496)
0.0 0.2 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.4 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.3 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 2.4 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.2 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.7 GO:0003684 damaged DNA binding(GO:0003684)
0.0 0.9 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.4 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.3 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.0 0.2 GO:0090079 translation activator activity(GO:0008494) translation regulator activity, nucleic acid binding(GO:0090079) mitochondrial ribosome binding(GO:0097177)
0.0 0.1 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.0 0.4 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.7 GO:0042393 histone binding(GO:0042393)
0.0 1.9 GO:0000989 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 0.9 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.2 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.0 0.1 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.0 0.3 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.3 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 0.2 GO:0015462 protein-transmembrane transporting ATPase activity(GO:0015462)
0.0 1.8 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.0 GO:0016530 metallochaperone activity(GO:0016530)
0.0 1.1 GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor(GO:0016620)
0.0 0.8 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.1 GO:0047714 galactolipase activity(GO:0047714)
0.0 0.9 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 1.0 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 1.0 GO:0004683 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.2 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.0 1.0 GO:0005096 GTPase activator activity(GO:0005096)
0.0 0.2 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.1 GO:0022841 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.0 0.2 GO:0009824 AMP dimethylallyltransferase activity(GO:0009824)
0.0 0.1 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 1.6 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.1 GO:0004340 glucokinase activity(GO:0004340)
0.0 0.1 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.0 0.2 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.2 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.0 0.2 GO:0008417 fucosyltransferase activity(GO:0008417)
0.0 0.6 GO:0008320 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.0 0.1 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.0 0.1 GO:0016885 CoA carboxylase activity(GO:0016421) ligase activity, forming carbon-carbon bonds(GO:0016885)
0.0 0.1 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 0.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.0 GO:0005080 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.3 PID MYC PATHWAY C-MYC pathway
0.3 0.9 PID IL12 2PATHWAY IL12-mediated signaling events
0.2 1.9 PID RAC1 PATHWAY RAC1 signaling pathway
0.1 0.4 PID TRKR PATHWAY Neurotrophic factor-mediated Trk receptor signaling
0.1 0.3 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.1 0.2 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.0 0.3 PID MTOR 4PATHWAY mTOR signaling pathway
0.0 0.3 PID P73PATHWAY p73 transcription factor network
0.0 0.1 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.9 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.2 0.9 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import
0.1 0.6 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 7ALPHA HYDROXYCHOLESTEROL Genes involved in Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
0.1 0.7 REACTOME L1CAM INTERACTIONS Genes involved in L1CAM interactions
0.1 0.4 REACTOME FRS2 MEDIATED CASCADE Genes involved in FRS2-mediated cascade
0.1 0.3 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.1 0.4 REACTOME MEIOTIC SYNAPSIS Genes involved in Meiotic Synapsis
0.1 0.7 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.7 REACTOME RNA POL II PRE TRANSCRIPTION EVENTS Genes involved in RNA Polymerase II Pre-transcription Events
0.1 1.1 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism
0.1 0.4 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.1 0.5 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.1 0.2 REACTOME RESOLUTION OF AP SITES VIA THE MULTIPLE NUCLEOTIDE PATCH REPLACEMENT PATHWAY Genes involved in Resolution of AP sites via the multiple-nucleotide patch replacement pathway
0.1 0.3 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.0 0.3 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.0 0.1 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT