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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT2G06200

Z-value: 2.92

Transcription factors associated with AT2G06200

Gene Symbol Gene ID Gene Info
AT2G06200
AT2G06200 growth-regulating factor 6

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
GRF6arTal_v1_Chr2_+_2426176_24262390.048.6e-01Click!

Activity profile of AT2G06200 motif

Sorted Z-values of AT2G06200 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_17855637 9.63 AT4G37990.1
ELI3-2
cinnamyl alcohol dehydrogenase 8
Chr3_-_8007836 9.35 AT3G22600.1
AT3G22600
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_15828228 8.70 AT4G32810.1
AT4G32810.2
CCD8
carotenoid cleavage dioxygenase 8
Chr1_-_30053936 8.64 AT1G79900.1
BAC2
Mitochondrial substrate carrier family protein
Chr3_-_21189859 8.06 AT3G57260.1
AT3G57260.2
BGL2
beta-1,3-glucanase 2
Chr3_+_17724400 7.87 AT3G48020.1
AT3G48020
hypothetical protein
Chr4_+_12461907 7.49 AT4G24000.1
CSLG2
cellulose synthase like G2
Chr1_-_10356482 7.48 AT1G29640.1
AT1G29640
senescence regulator (Protein of unknown function, DUF584)
Chr1_-_4571229 7.34 AT1G13340.1
AT1G13340
Regulator of Vps4 activity in the MVB pathway protein
Chr1_-_19698482 7.27 AT1G52890.1
NAC019
NAC domain containing protein 19
Chr3_+_19239305 7.23 AT3G51860.1
AT3G51860.2
CAX3
cation exchanger 3
Chr3_-_23410360 7.23 AT3G63380.1
AT3G63380
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr5_-_26857086 7.15 AT5G67310.1
CYP81G1
cytochrome P450, family 81, subfamily G, polypeptide 1
Chr4_-_12018492 7.10 AT4G22920.1
NYE1
non-yellowing 1
Chr4_-_12018643 7.08 AT4G22920.2
NYE1
non-yellowing 1
Chr3_-_7999552 6.71 AT3G22560.1
AT3G22560
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr4_-_16344818 6.65 AT4G34131.1
UGT73B3
UDP-glucosyl transferase 73B3
Chr4_+_13653579 6.63 AT4G27260.1
WES1
Auxin-responsive GH3 family protein
Chr2_-_16014991 6.43 AT2G38240.1
AT2G38240
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr2_+_7693596 6.36 AT2G17710.1
AT2G17710
Big1
Chr4_+_12463312 6.35 AT4G24000.2
CSLG2
cellulose synthase like G2
Chr1_-_27834207 6.21 AT1G74010.1
AT1G74010
Calcium-dependent phosphotriesterase superfamily protein
Chr3_+_18634546 6.21 AT3G50260.1
CEJ1
cooperatively regulated by ethylene and jasmonate 1
Chr5_-_2079005 6.10 AT5G06720.1
PA2
peroxidase 2
Chr1_-_28024860 6.09 AT1G74590.1
GSTU10
glutathione S-transferase TAU 10
Chr4_+_10398857 6.09 AT4G18980.1
AtS40-3
AtS40-3
Chr1_-_27475962 5.95 AT1G73040.1
AT1G73040
Mannose-binding lectin superfamily protein
Chr5_+_5995479 5.94 AT5G18130.2
AT5G18130
transmembrane protein
Chr5_+_5995323 5.91 AT5G18130.1
AT5G18130
transmembrane protein
Chr3_+_6097201 5.90 AT3G17820.1
GLN1.3
glutamine synthetase 1.3
Chr5_+_4271730 5.86 AT5G13330.1
Rap2.6L
related to AP2 6l
Chr4_-_15573323 5.81 AT4G32250.3
AT4G32250.1
AT4G32250.2
AT4G32250
Protein kinase superfamily protein
Chr1_-_5338326 5.80 AT1G15520.1
AT1G15520.2
ABCG40
pleiotropic drug resistance 12
Chr1_+_3288087 5.69 AT1G10070.3
AT1G10070.2
AT1G10070.1
BCAT-2
branched-chain amino acid transaminase 2
Chr1_+_25473544 5.68 AT1G67920.1
AT1G67920
hypothetical protein
Chr5_+_2938193 5.56 AT5G09440.1
EXL4
EXORDIUM like 4
Chr1_+_202103 5.55 AT1G01560.3
AT1G01560.2
AT1G01560.1
AT1G01560.4
MPK11
MAP kinase 11
Chr5_-_23673287 5.51 AT5G58570.1
AT5G58570
transmembrane protein
Chr3_+_9887917 5.49 AT3G26830.1
PAD3
Cytochrome P450 superfamily protein
Chr1_-_12398418 5.46 AT1G34060.1
AT1G34060
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr3_+_512220 5.40 AT3G02480.1
AT3G02480
Late embryogenesis abundant protein (LEA) family protein
Chr3_+_995217 5.39 AT3G03870.1
AT3G03870
transmembrane protein
Chr3_+_1635194 5.38 AT3G05630.1
PLDP2
phospholipase D P2
Chr3_+_995062 5.38 AT3G03870.2
AT3G03870
transmembrane protein
Chr5_+_8202919 5.37 AT5G24200.1
AT5G24200.2
AT5G24200.3
AT5G24200
alpha/beta-Hydrolases superfamily protein
Chr2_+_11263889 5.36 AT2G26480.1
UGT76D1
UDP-glucosyl transferase 76D1
Chr4_+_10818128 5.30 AT4G19970.1
AT4G19970
nucleotide-diphospho-sugar transferase family protein
Chr4_-_12242706 5.25 AT4G23450.4
AT4G23450.6
AT4G23450.2
AT4G23450.5
AT4G23450.3
AT4G23450.1
AIRP1
RING/U-box superfamily protein
Chr5_-_25608987 5.23 AT5G63970.2
RGLG3
Copine (Calcium-dependent phospholipid-binding protein) family
Chr1_-_12397986 5.19 AT1G34060.2
AT1G34060
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr5_-_25609306 5.09 AT5G63970.1
RGLG3
Copine (Calcium-dependent phospholipid-binding protein) family
Chr5_-_9716418 5.06 AT5G27520.1
PNC2
peroxisomal adenine nucleotide carrier 2
Chr5_+_20764096 5.03 AT5G51070.1
ERD1
Clp ATPase
Chr4_+_14065992 5.00 AT4G28460.1
AT4G28460
transmembrane protein
Chr1_-_430720 4.95 AT1G02220.1
NAC003
NAC domain containing protein 3
Chr2_-_7707954 4.93 AT2G17740.1
AT2G17740
Cysteine/Histidine-rich C1 domain family protein
Chr3_+_9685932 4.88 AT3G26470.1
AT3G26470
Powdery mildew resistance protein, RPW8 domain-containing protein
Chr3_-_350010 4.87 AT3G02040.1
SRG3
senescence-related gene 3
Chr5_+_16301072 4.82 AT5G40730.1
AGP24
arabinogalactan protein 24
Chr4_-_15507176 4.80 AT4G32070.2
AT4G32070.1
Phox4
Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
Chr5_+_4461554 4.78 AT5G13820.2
TBP1
telomeric DNA binding protein 1
Chr3_-_2651101 4.78 AT3G08720.4
AT3G08720.3
AT3G08720.2
AT3G08720.1
S6K2
serine/threonine protein kinase 2
Chr5_-_2081685 4.77 AT5G06730.1
AT5G06730
Peroxidase superfamily protein
Chr3_-_1660380 4.76 AT3G05675.3
AT3G05675.2
AT3G05675.1
AT3G05675
BTB/POZ domain-containing protein
Chr4_-_11971203 4.71 AT4G22780.1
ACR7
ACT domain repeat 7
Chr1_+_11937499 4.69 AT1G32940.1
AT1G32940.3
AT1G32940.4
SBT3.5
Subtilase family protein
Chr4_-_11971357 4.69 AT4G22780.2
ACR7
ACT domain repeat 7
Chr4_-_11585391 4.68 AT4G21830.2
MSRB7
methionine sulfoxide reductase B7
Chr3_+_3967058 4.65 AT3G12510.1
AT3G12510
MADS-box family protein
Chr2_+_8207199 4.63 AT2G18950.1
AT2G18950.2
HPT1
homogentisate phytyltransferase 1
Chr4_+_12977192 4.57 AT4G25390.1
AT4G25390.2
AT4G25390
Protein kinase superfamily protein
Chr1_-_1011145 4.56 AT1G03940.1
AT1G03940
HXXXD-type acyl-transferase family protein
Chr2_-_15425129 4.54 AT2G36800.1
DOGT1
don-glucosyltransferase 1
Chr5_+_4460840 4.54 AT5G13820.1
TBP1
telomeric DNA binding protein 1
Chr3_+_17692666 4.52 AT3G47950.1
HA4
H[+]-ATPase 4
Chr3_-_22945288 4.50 AT3G61960.2
AT3G61960.1
AT3G61960
Protein kinase superfamily protein
Chr1_+_12448543 4.50 AT1G34180.1
AT1G34180.3
AT1G34180.2
AT1G34180.4
NAC016
NAC domain containing protein 16
Chr5_+_206432 4.48 AT5G01520.2
AT5G01520.1
AIRP2
RING/U-box superfamily protein
Chr2_-_15092353 4.47 AT2G35940.3
AT2G35940.1
BLH1
BEL1-like homeodomain 1
Chr4_-_11585542 4.46 AT4G21830.1
MSRB7
methionine sulfoxide reductase B7
Chr1_-_27569823 4.44 AT1G73330.1
DR4
drought-repressed 4
Chr3_-_1286760 4.44 AT3G04720.1
PR4
pathogenesis-related 4
Chr5_-_20977668 4.44 AT5G51640.1
YLS7
trichome birefringence-like protein (DUF828)
Chr2_-_15092178 4.43 AT2G35940.2
BLH1
BEL1-like homeodomain 1
Chr2_+_11620076 4.40 AT2G27180.1
AT2G27180
hypothetical protein
Chr3_+_17692853 4.39 AT3G47950.2
HA4
H[+]-ATPase 4
Chr1_-_5133860 4.37 AT1G14880.1
PCR1
PLANT CADMIUM RESISTANCE 1
Chr1_-_24001593 4.37 AT1G64610.2
AT1G64610
Transducin/WD40 repeat-like superfamily protein
Chr5_+_5209717 4.37 AT5G15960.1
KIN1
stress-responsive protein (KIN1) / stress-induced protein (KIN1)
Chr4_+_6146623 4.34 AT4G09750.1
AT4G09750
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_-_17976774 4.32 AT3G48520.1
CYP94B3
cytochrome P450, family 94, subfamily B, polypeptide 3
Chr2_-_13613573 4.27 AT2G31990.1
AT2G31990.3
AT2G31990.2
AT2G31990
Exostosin family protein
Chr5_+_1602205 4.26 AT5G05410.2
AT5G05410.1
DREB2A
DRE-binding protein 2A
Chr1_+_30135024 4.22 AT1G80110.1
PP2-B11
phloem protein 2-B11
Chr4_-_10321573 4.22 AT4G18800.1
RABA1d
RAB GTPase homolog A1D
Chr3_+_20564236 4.21 AT3G55470.1
AT3G55470
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr4_+_7607241 4.21 AT4G13030.1
AT4G13030.2
AT4G13030.3
AT4G13030
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_-_24002058 4.21 AT1G64610.1
AT1G64610
Transducin/WD40 repeat-like superfamily protein
Chr3_+_16466144 4.19 AT3G45010.1
scpl48
serine carboxypeptidase-like 48
Chr3_-_6086203 4.18 AT3G17770.1
AT3G17770
Dihydroxyacetone kinase
Chr1_-_24967574 4.16 AT1G66920.1
AT1G66920.2
AT1G66920.3
AT1G66920
Protein kinase superfamily protein
Chr3_+_20564081 4.16 AT3G55470.2
AT3G55470
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr1_-_1257893 4.15 AT1G04580.1
AO4
aldehyde oxidase 4
Chr4_+_12741032 4.15 AT4G24690.1
NBR1
ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein
Chr3_-_8040152 4.13 AT3G22750.1
AT3G22750
Protein kinase superfamily protein
Chr3_+_9496102 4.11 AT3G25950.1
AT3G25950
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Chr1_+_24357749 4.08 AT1G65500.1
AT1G65500
transmembrane protein
Chr1_+_9825169 4.08 AT1G28130.1
GH3.17
Auxin-responsive GH3 family protein
Chr5_+_22468579 4.06 AT5G55460.1
AT5G55460
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_-_17263017 4.05 AT2G41410.1
AT2G41410
Calcium-binding EF-hand family protein
Chr2_+_18216574 4.05 AT2G44010.1
AT2G44010
hypothetical protein
Chr4_+_9385119 4.05 AT4G16670.2
AT4G16670.3
AT4G16670.1
AT4G16670
auxin canalization protein (DUF828)
Chr4_-_17559104 4.03 AT4G37310.1
CYP81H1
cytochrome P450, family 81, subfamily H, polypeptide 1
Chr2_-_852321 4.03 AT2G02930.1
GSTF3
glutathione S-transferase F3
Chr4_-_14393381 4.00 AT4G29190.1
OZF2
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr3_+_19875375 4.00 AT3G53600.1
AT3G53600
C2H2-type zinc finger family protein
Chr4_-_11694564 3.99 AT4G22070.3
AT4G22070.4
AT4G22070.1
AT4G22070.2
WRKY31
WRKY DNA-binding protein 31
Chr1_+_9825914 3.98 AT1G28130.2
GH3.17
Auxin-responsive GH3 family protein
Chr2_+_15514923 3.98 AT2G36950.1
AT2G36950
Heavy metal transport/detoxification superfamily protein
Chr1_-_10806317 3.98 AT1G30500.1
AT1G30500.2
NF-YA7
nuclear factor Y, subunit A7
Chr5_-_315405 3.97 AT5G01820.1
SR1
serine/threonine protein kinase 1
Chr2_-_8447355 3.97 AT2G19500.1
CKX2
cytokinin oxidase 2
Chr5_+_16801707 3.97 AT5G42010.2
AT5G42010.1
AT5G42010
Transducin/WD40 repeat-like superfamily protein
Chr1_-_21468505 3.95 AT1G58030.1
CAT2
cationic amino acid transporter 2
Chr5_+_26864846 3.94 AT5G67340.2
AT5G67340
ARM repeat superfamily protein
Chr3_-_11384145 3.94 AT3G29575.1
AT3G29575.4
AT3G29575.3
AFP3
ABI five binding protein 3
Chr2_-_14051400 3.94 AT2G33150.1
PKT3
peroxisomal 3-ketoacyl-CoA thiolase 3
Chr5_-_22507879 3.93 AT5G55560.1
AT5G55560
Protein kinase superfamily protein
Chr4_-_7414955 3.93 AT4G12500.1
AT4G12500
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_17798979 3.93 AT1G48210.5
AT1G48210.7
AT1G48210.4
AT1G48210.6
AT1G48210
Protein kinase superfamily protein
Chr3_-_6804114 3.91 AT3G19580.2
ZF2
zinc-finger protein 2
Chr5_+_21030943 3.90 AT5G51770.1
AT5G51770
Protein kinase superfamily protein
Chr5_-_1887031 3.89 AT5G06230.2
AT5G06230.3
AT5G06230.1
TBL9
TRICHOME BIREFRINGENCE-LIKE 9
Chr4_-_18232011 3.89 AT4G39140.5
AT4G39140.1
AT4G39140.2
AT4G39140.4
AT4G39140.3
AT4G39140
RING/U-box superfamily protein
Chr1_+_455688 3.88 AT1G02305.1
AT1G02305
Cysteine proteinases superfamily protein
Chr3_-_16984867 3.87 AT3G46230.1
HSP17.4
heat shock protein 17.4
Chr5_+_6212773 3.86 AT5G18640.2
AT5G18640.1
AT5G18640.3
AT5G18640.4
AT5G18640.5
AT5G18640
alpha/beta-Hydrolases superfamily protein
Chr1_-_19993334 3.86 AT1G53580.2
AT1G53580.1
GLY3
glyoxalase II 3
Chr3_-_6804296 3.86 AT3G19580.1
ZF2
zinc-finger protein 2
Chr2_-_13266446 3.86 AT2G31130.2
AT2G31130.6
AT2G31130.1
AT2G31130.5
AT2G31130.4
AT2G31130.3
AT2G31130
hypothetical protein
Chr5_+_1176005 3.84 AT5G04250.2
AT5G04250.1
AT5G04250
Cysteine proteinases superfamily protein
Chr5_-_3368082 3.84 AT5G10650.2
AT5G10650
RING/U-box superfamily protein
Chr5_-_3368264 3.83 AT5G10650.3
AT5G10650
RING/U-box superfamily protein
Chr4_-_10148656 3.82 AT4G18360.4
AT4G18360.2
AT4G18360.1
AT4G18360.3
GOX3
Aldolase-type TIM barrel family protein
Chr2_-_476650 3.81 AT2G02010.1
GAD4
glutamate decarboxylase 4
Chr1_-_17928930 3.80 AT1G48490.4
AT1G48490.2
AT1G48490.1
AT1G48490.3
AT1G48490
Protein kinase superfamily protein
Chr1_+_25865471 3.80 AT1G68820.1
AT1G68820.3
AT1G68820.2
AT1G68820
Transmembrane Fragile-X-F-associated protein
Chr5_+_26864395 3.79 AT5G67340.1
AT5G67340
ARM repeat superfamily protein
Chr4_+_9112686 3.79 AT4G16110.1
RR2
response regulator 2
Chr5_-_3368439 3.78 AT5G10650.1
AT5G10650
RING/U-box superfamily protein
Chr4_-_8464485 3.77 AT4G14746.1
AT4G14746.2
AT4G14746
neurogenic locus notch-like protein
Chr3_-_1791887 3.77 AT3G05970.1
LACS6
long-chain acyl-CoA synthetase 6
Chr1_-_11418464 3.76 AT1G31820.1
PUT1
Amino acid permease family protein
Chr1_-_22360149 3.75 AT1G60730.2
AT1G60730.3
AT1G60730.1
AT1G60730
NAD(P)-linked oxidoreductase superfamily protein
Chr5_+_25550937 3.73 AT5G63850.1
AAP4
amino acid permease 4
Chr3_+_20849762 3.72 AT3G56200.1
AT3G56200
Transmembrane amino acid transporter family protein
Chr2_-_15151575 3.72 AT2G36080.3
AT2G36080.2
AT2G36080.4
AT2G36080.1
ABS2
AP2/B3-like transcriptional factor family protein
Chr1_-_5268602 3.71 AT1G15300.1
CYTOSLEEPER

Chr1_+_11937183 3.70 AT1G32940.2
SBT3.5
Subtilase family protein
Chr3_+_23295285 3.70 AT3G63030.1
MBD4
methyl-CPG-binding domain 4
Chr5_-_896433 3.70 AT5G03550.1
AT5G03550
MATH domain/coiled-coil protein
Chr4_+_12314025 3.69 AT4G23610.1
AT4G23610
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr5_-_3687854 3.69 AT5G11520.1
ASP3
aspartate aminotransferase 3
Chr1_+_26702493 3.69 AT1G70800.1
EHB1
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr3_-_9898006 3.66 AT3G26850.2
AT3G26850.1
AT3G26850
histone-lysine N-methyltransferase
Chr5_+_9974411 3.66 AT5G27940.1
WPP3
WPP domain protein 3
Chr3_-_21285941 3.66 AT3G57510.1
ADPG1
Pectin lyase-like superfamily protein
Chr5_-_5360710 3.65 AT5G16380.1
AT5G16380
autophagy-like protein, putative (Protein of unknown function, DUF538)
Chr2_-_476997 3.65 AT2G02010.2
GAD4
glutamate decarboxylase 4
Chr3_-_5796893 3.63 AT3G16990.1
AT3G16990
heme oxygenase-like, multi-helical
Chr5_+_3536189 3.63 AT5G11110.1
SPS2F
sucrose phosphate synthase 2F
Chr3_+_17285565 3.62 AT3G46930.1
AT3G46930.2
AT3G46930.5
AT3G46930.3
AT3G46930.6
AT3G46930.4
AT3G46930
Protein kinase superfamily protein
Chr1_-_2501581 3.58 AT1G08050.1
AT1G08050
Zinc finger (C3HC4-type RING finger) family protein
Chr3_+_21656484 3.57 AT3G58570.1
AT3G58570
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_17798431 3.57 AT1G48210.1
AT1G48210.2
AT1G48210.3
AT1G48210
Protein kinase superfamily protein
Chr1_-_1547798 3.57 AT1G05300.2
AT1G05300.1
ZIP5
zinc transporter 5 precursor
Chr1_+_22733359 3.55 AT1G61610.2
AT1G61610.1
AT1G61610
S-locus lectin protein kinase family protein
Chr2_+_9585549 3.54 AT2G22560.1
NET2D
Kinase interacting (KIP1-like) family protein
Chr5_+_21771811 3.51 AT5G53590.1
AT5G53590
SAUR-like auxin-responsive protein family
Chr1_-_29077390 3.50 AT1G77380.1
AAP3
amino acid permease 3
Chr2_-_16466941 3.48 AT2G39435.2
AT2G39435.3
AT2G39435.6
AT2G39435.5
AT2G39435.1
TRM18
Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein
Chr3_-_1462917 3.47 AT3G05165.4
AT3G05165.1
AT3G05165.6
AT3G05165.3
AT3G05165.5
AT3G05165.2
AT3G05165
Major facilitator superfamily protein
Chr4_-_7658302 3.47 AT4G13180.1
AT4G13180
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_+_12023940 3.46 AT2G28200.1
AT2G28200
C2H2-type zinc finger family protein
Chr1_+_29099839 3.46 AT1G77450.1
NAC032
NAC domain containing protein 32
Chr3_-_3325046 3.43 AT3G10640.2
AT3G10640.1
VPS60.1
SNF7 family protein
Chr5_-_4085376 3.42 AT5G12930.1
AT5G12930
inactive rhomboid protein
Chr2_+_10629662 3.41 AT2G25000.1
AT2G25000.2
AT2G25000.3
AT2G25000.4
WRKY60
WRKY DNA-binding protein 60
Chr3_+_2641012 3.41 AT3G08690.1
AT3G08690.2
UBC11
ubiquitin-conjugating enzyme 11
Chr2_+_11164575 3.40 AT2G26230.1
AT2G26230
uricase / urate oxidase / nodulin 35
Chr1_+_29073840 3.39 AT1G77370.1
AT1G77370.2
AT1G77370
Glutaredoxin family protein
Chr2_-_13327496 3.37 AT2G31260.1
APG9
autophagy 9 (APG9)
Chr5_-_24501770 3.36 AT5G60900.1
RLK1
receptor-like protein kinase 1
Chr4_-_10599182 3.34 AT4G19430.1
AT4G19430
hypothetical protein
Chr2_+_14183263 3.34 AT2G33490.3
AT2G33490.1
AT2G33490.2
AT2G33490
hydroxyproline-rich glycoprotein family protein
Chr5_-_9148391 3.33 AT5G26170.1
WRKY50
WRKY DNA-binding protein 50
Chr1_+_7610241 3.32 AT1G21670.1
AT1G21670
DPP6 amino-terminal domain protein
Chr4_-_17206033 3.32 AT4G36430.1
AT4G36430
Peroxidase superfamily protein
Chr5_-_19422533 3.31 AT5G47960.1
RABA4C
RAB GTPase homolog A4C
Chr5_+_25692425 3.30 AT5G64230.1
AT5G64230
1,8-cineole synthase

Network of associatons between targets according to the STRING database.

First level regulatory network of AT2G06200

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.9 8.7 GO:0016124 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
2.2 11.2 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system(GO:0010201)
2.2 11.1 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
2.2 8.6 GO:0015697 quaternary ammonium group transport(GO:0015697)
2.1 8.2 GO:0010351 lithium ion transport(GO:0010351)
2.0 6.1 GO:0002215 defense response to nematode(GO:0002215)
2.0 12.2 GO:0009413 response to flooding(GO:0009413)
1.8 7.3 GO:0045332 phospholipid translocation(GO:0045332)
1.7 6.6 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
1.6 1.6 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
1.6 4.7 GO:0010124 phenylacetate catabolic process(GO:0010124)
1.5 9.1 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
1.5 5.8 GO:0019377 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
1.4 5.8 GO:0015692 lead ion transport(GO:0015692)
1.4 4.2 GO:1902347 response to strigolactone(GO:1902347)
1.4 5.6 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
1.4 8.2 GO:0034087 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
1.4 5.4 GO:0044805 late nucleophagy(GO:0044805)
1.3 5.4 GO:0034720 histone H3-K4 demethylation(GO:0034720)
1.3 1.3 GO:0070601 centromeric sister chromatid cohesion(GO:0070601)
1.3 5.2 GO:0071836 nectar secretion(GO:0071836)
1.2 4.9 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) glycerophospholipid catabolic process(GO:0046475) cellular trivalent inorganic anion homeostasis(GO:0072502)
1.2 3.6 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
1.2 7.1 GO:0043409 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
1.2 3.5 GO:0015802 basic amino acid transport(GO:0015802)
1.2 3.5 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
1.1 5.6 GO:0060151 peroxisome localization(GO:0060151)
1.1 10.9 GO:0000304 response to singlet oxygen(GO:0000304)
1.1 6.5 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
1.1 4.3 GO:0048480 stigma development(GO:0048480)
1.1 8.4 GO:0010310 regulation of hydrogen peroxide metabolic process(GO:0010310)
1.0 3.1 GO:0010045 response to nickel cation(GO:0010045)
1.0 5.1 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
1.0 3.0 GO:0009915 phloem sucrose loading(GO:0009915)
1.0 1.0 GO:0071280 cellular response to copper ion(GO:0071280)
1.0 2.9 GO:0009107 lipoate biosynthetic process(GO:0009107)
1.0 7.7 GO:0044375 regulation of peroxisome size(GO:0044375)
0.9 2.8 GO:1904580 regulation of intracellular mRNA localization(GO:1904580)
0.9 5.4 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.9 3.5 GO:0042256 mature ribosome assembly(GO:0042256)
0.8 2.5 GO:0090435 protein localization to nuclear envelope(GO:0090435)
0.8 5.9 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.8 4.2 GO:0006103 2-oxoglutarate metabolic process(GO:0006103)
0.8 5.9 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.8 2.5 GO:0010353 response to trehalose(GO:0010353)
0.8 2.5 GO:0034247 snoRNA splicing(GO:0034247)
0.8 2.4 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.8 1.6 GO:0034767 positive regulation of ion transmembrane transport(GO:0034767)
0.8 2.4 GO:0050685 positive regulation of RNA splicing(GO:0033120) positive regulation of mRNA processing(GO:0050685)
0.8 4.0 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.8 7.0 GO:0034311 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.8 3.8 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.8 4.6 GO:0043090 amino acid import(GO:0043090)
0.7 2.2 GO:0070922 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.7 4.4 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.7 3.6 GO:0051601 exocyst localization(GO:0051601)
0.7 2.9 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.7 2.2 GO:1900364 negative regulation of mRNA 3'-end processing(GO:0031441) negative regulation of mRNA processing(GO:0050686) negative regulation of mRNA polyadenylation(GO:1900364) negative regulation of mRNA metabolic process(GO:1903312)
0.7 2.9 GO:2000036 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.7 5.7 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.7 12.8 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.7 2.8 GO:0031538 negative regulation of anthocyanin metabolic process(GO:0031538)
0.7 1.4 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.7 4.0 GO:0015846 polyamine transport(GO:0015846)
0.7 3.9 GO:0060866 leaf abscission(GO:0060866)
0.6 1.9 GO:0071485 cellular response to absence of light(GO:0071485)
0.6 0.6 GO:0070861 regulation of protein exit from endoplasmic reticulum(GO:0070861) positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.6 3.9 GO:0006552 leucine catabolic process(GO:0006552)
0.6 5.8 GO:0048209 regulation of vesicle targeting, to, from or within Golgi(GO:0048209)
0.6 2.5 GO:0010507 negative regulation of autophagy(GO:0010507)
0.6 4.4 GO:0045898 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.6 1.3 GO:1900363 regulation of mRNA polyadenylation(GO:1900363)
0.6 1.9 GO:0090143 nucleoid organization(GO:0090143)
0.6 2.5 GO:1902583 multi-organism intracellular transport(GO:1902583)
0.6 8.0 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.6 5.5 GO:0052317 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.6 2.4 GO:1902065 response to L-glutamate(GO:1902065)
0.6 4.8 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.6 4.2 GO:0019405 alditol catabolic process(GO:0019405) glycerol catabolic process(GO:0019563)
0.6 3.6 GO:1990019 protein storage vacuole organization(GO:1990019)
0.6 3.5 GO:0071398 response to fatty acid(GO:0070542) cellular response to fatty acid(GO:0071398)
0.6 1.8 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.6 8.5 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.6 1.7 GO:0042787 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.6 3.9 GO:0070813 hydrogen sulfide metabolic process(GO:0070813)
0.6 3.3 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.5 2.2 GO:0045046 protein import into peroxisome membrane(GO:0045046)
0.5 3.8 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.5 4.8 GO:0006491 N-glycan processing(GO:0006491)
0.5 2.1 GO:0031087 nuclear-transcribed mRNA catabolic process, deadenylation-independent decay(GO:0031086) deadenylation-independent decapping of nuclear-transcribed mRNA(GO:0031087)
0.5 1.5 GO:0010184 cytokinin transport(GO:0010184)
0.5 3.1 GO:0009745 sucrose mediated signaling(GO:0009745)
0.5 8.7 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.5 4.1 GO:0070070 proton-transporting V-type ATPase complex assembly(GO:0070070)
0.5 3.0 GO:0006145 purine nucleobase catabolic process(GO:0006145)
0.5 3.0 GO:0010071 root meristem specification(GO:0010071)
0.5 3.0 GO:0010273 detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169)
0.5 1.5 GO:0051204 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.5 3.4 GO:0010439 regulation of glucosinolate biosynthetic process(GO:0010439)
0.5 1.5 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.5 1.5 GO:0097033 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.5 1.9 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.5 3.3 GO:0009099 valine biosynthetic process(GO:0009099)
0.5 3.7 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.5 3.7 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.5 4.6 GO:0016574 histone ubiquitination(GO:0016574)
0.4 6.7 GO:0043248 proteasome assembly(GO:0043248)
0.4 15.5 GO:0045324 late endosome to vacuole transport(GO:0045324)
0.4 2.6 GO:0043617 cellular response to sucrose starvation(GO:0043617)
0.4 6.1 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.4 3.0 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.4 1.7 GO:0060862 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.4 4.7 GO:0055062 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.4 1.3 GO:0006348 chromatin silencing at telomere(GO:0006348)
0.4 3.4 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.4 0.9 GO:0048729 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.4 1.7 GO:0006527 arginine catabolic process(GO:0006527)
0.4 1.7 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.4 2.9 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.4 1.7 GO:0030259 lipid glycosylation(GO:0030259)
0.4 3.3 GO:0034052 positive regulation of plant-type hypersensitive response(GO:0034052)
0.4 4.1 GO:0050879 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.4 1.2 GO:0002188 translation reinitiation(GO:0002188)
0.4 4.5 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.4 2.1 GO:0046487 glyoxylate metabolic process(GO:0046487)
0.4 2.0 GO:0006777 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.4 2.0 GO:0048530 fruit morphogenesis(GO:0048530)
0.4 3.6 GO:0009229 thiamine diphosphate biosynthetic process(GO:0009229) thiamine diphosphate metabolic process(GO:0042357)
0.4 2.0 GO:0080009 mRNA methylation(GO:0080009)
0.4 2.0 GO:0035627 ceramide transport(GO:0035627)
0.4 2.0 GO:0043903 regulation of symbiosis, encompassing mutualism through parasitism(GO:0043903)
0.4 0.8 GO:1903580 regulation of oxidative phosphorylation(GO:0002082) positive regulation of nucleoside metabolic process(GO:0045979) positive regulation of nucleotide metabolic process(GO:0045981) positive regulation of purine nucleotide metabolic process(GO:1900544) positive regulation of ATP metabolic process(GO:1903580) positive regulation of oxidative phosphorylation(GO:1903862)
0.4 1.9 GO:0010452 histone H3-K36 methylation(GO:0010452)
0.4 1.2 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.4 2.7 GO:0051014 actin filament severing(GO:0051014)
0.4 1.9 GO:0010226 response to lithium ion(GO:0010226)
0.4 3.4 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.4 1.5 GO:0040031 snRNA modification(GO:0040031)
0.4 0.7 GO:0010288 response to lead ion(GO:0010288)
0.4 1.8 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.4 3.9 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.4 1.8 GO:0005980 glycogen catabolic process(GO:0005980)
0.4 1.1 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.4 2.1 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.3 9.1 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.3 1.7 GO:0008535 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.3 7.9 GO:0009937 regulation of gibberellic acid mediated signaling pathway(GO:0009937)
0.3 0.7 GO:0048863 stem cell differentiation(GO:0048863)
0.3 4.5 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.3 3.1 GO:0009410 response to xenobiotic stimulus(GO:0009410)
0.3 1.0 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.3 0.3 GO:0055122 response to very low light intensity stimulus(GO:0055122)
0.3 1.3 GO:0051031 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.3 1.3 GO:0001112 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.3 3.3 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.3 5.2 GO:0006538 glutamate catabolic process(GO:0006538)
0.3 1.0 GO:0016540 protein autoprocessing(GO:0016540)
0.3 0.9 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.3 6.0 GO:0010048 vernalization response(GO:0010048)
0.3 1.9 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.3 4.6 GO:0070298 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.3 0.9 GO:0071481 cellular response to X-ray(GO:0071481)
0.3 14.6 GO:0042542 response to hydrogen peroxide(GO:0042542)
0.3 13.4 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.3 1.2 GO:1901562 response to paraquat(GO:1901562)
0.3 8.2 GO:0050826 response to freezing(GO:0050826)
0.3 8.8 GO:0016575 histone deacetylation(GO:0016575)
0.3 1.2 GO:0071494 cellular response to UV-C(GO:0071494)
0.3 1.2 GO:0046786 viral replication complex formation and maintenance(GO:0046786)
0.3 1.2 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.3 21.0 GO:0016579 protein deubiquitination(GO:0016579)
0.3 8.9 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.3 3.7 GO:0006620 posttranslational protein targeting to membrane(GO:0006620)
0.3 11.1 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.3 1.1 GO:0006283 transcription-coupled nucleotide-excision repair(GO:0006283)
0.3 1.1 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.3 17.6 GO:0006972 hyperosmotic response(GO:0006972)
0.3 2.5 GO:0006102 isocitrate metabolic process(GO:0006102)
0.3 4.1 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.3 1.6 GO:0010508 positive regulation of autophagy(GO:0010508)
0.3 2.7 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.3 4.8 GO:0080027 response to herbivore(GO:0080027)
0.3 5.1 GO:0009880 embryonic pattern specification(GO:0009880)
0.3 0.5 GO:0018196 peptidyl-asparagine modification(GO:0018196) protein N-linked glycosylation via asparagine(GO:0018279)
0.3 2.9 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.3 5.2 GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.3 12.4 GO:0002239 response to oomycetes(GO:0002239)
0.3 2.3 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.3 1.0 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.3 2.8 GO:0007584 response to nutrient(GO:0007584)
0.3 0.8 GO:0030638 polyketide metabolic process(GO:0030638)
0.3 7.4 GO:0030641 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.3 2.3 GO:0060321 acceptance of pollen(GO:0060321)
0.3 2.0 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.3 2.0 GO:0006360 transcription from RNA polymerase I promoter(GO:0006360)
0.3 3.5 GO:0046352 disaccharide catabolic process(GO:0046352)
0.3 4.5 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.2 2.4 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.2 3.2 GO:0080113 regulation of seed growth(GO:0080113)
0.2 1.0 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.2 3.2 GO:0018342 protein prenylation(GO:0018342) prenylation(GO:0097354)
0.2 2.4 GO:0009556 microsporogenesis(GO:0009556)
0.2 4.5 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.2 4.3 GO:0018209 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.2 10.2 GO:0030433 ER-associated ubiquitin-dependent protein catabolic process(GO:0030433) ERAD pathway(GO:0036503)
0.2 1.4 GO:0043102 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.2 0.5 GO:0043970 histone H3-K9 acetylation(GO:0043970)
0.2 0.5 GO:0006423 cysteinyl-tRNA aminoacylation(GO:0006423)
0.2 2.1 GO:0015908 fatty acid transport(GO:0015908)
0.2 2.1 GO:0033319 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.2 1.6 GO:0006914 autophagy(GO:0006914)
0.2 6.5 GO:0010252 auxin homeostasis(GO:0010252)
0.2 1.6 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.2 2.3 GO:0051865 protein autoubiquitination(GO:0051865)
0.2 1.1 GO:0045824 negative regulation of innate immune response(GO:0045824)
0.2 20.2 GO:0000209 protein polyubiquitination(GO:0000209)
0.2 0.9 GO:0042144 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144) vacuole fusion(GO:0097576)
0.2 5.6 GO:0071230 cellular response to amino acid stimulus(GO:0071230)
0.2 0.4 GO:2000068 regulation of defense response to insect(GO:2000068)
0.2 0.9 GO:0090172 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.2 1.1 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.2 0.7 GO:0007266 Rho protein signal transduction(GO:0007266)
0.2 0.6 GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly(GO:0033615)
0.2 3.2 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.2 7.4 GO:0000723 telomere maintenance(GO:0000723) telomere organization(GO:0032200)
0.2 0.8 GO:0051196 regulation of coenzyme metabolic process(GO:0051196)
0.2 2.7 GO:1905037 autophagosome assembly(GO:0000045) autophagosome organization(GO:1905037)
0.2 3.6 GO:0006995 cellular response to nitrogen starvation(GO:0006995)
0.2 6.9 GO:0043547 positive regulation of GTPase activity(GO:0043547)
0.2 1.0 GO:0080121 AMP transport(GO:0080121)
0.2 0.6 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.2 1.8 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.2 3.2 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.2 1.8 GO:0018107 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.2 0.6 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.2 0.6 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.2 0.2 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.2 2.4 GO:0006515 misfolded or incompletely synthesized protein catabolic process(GO:0006515)
0.2 1.1 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.2 0.6 GO:0045901 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.2 0.7 GO:0006611 protein export from nucleus(GO:0006611)
0.2 4.3 GO:0006383 transcription from RNA polymerase III promoter(GO:0006383)
0.2 29.4 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.2 0.5 GO:0018216 peptidyl-arginine methylation(GO:0018216) peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.2 2.2 GO:0046688 response to copper ion(GO:0046688)
0.2 5.9 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.2 6.2 GO:0051170 nuclear import(GO:0051170)
0.2 0.7 GO:0000012 single strand break repair(GO:0000012)
0.2 1.2 GO:0032781 positive regulation of ATPase activity(GO:0032781)
0.2 1.0 GO:0006751 glutathione catabolic process(GO:0006751)
0.2 1.9 GO:0052544 defense response by callose deposition in cell wall(GO:0052544)
0.2 1.4 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.2 0.9 GO:1904961 quiescent center organization(GO:1904961)
0.2 0.7 GO:0009726 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.2 8.9 GO:0006897 endocytosis(GO:0006897)
0.2 1.5 GO:0019566 arabinose metabolic process(GO:0019566)
0.2 0.5 GO:0071963 establishment or maintenance of cell polarity regulating cell shape(GO:0071963) regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000769)
0.2 0.9 GO:0071586 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.2 5.2 GO:0009846 pollen germination(GO:0009846)
0.2 1.7 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.2 0.6 GO:0006741 NADP biosynthetic process(GO:0006741)
0.2 0.8 GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation(GO:0006616)
0.2 29.0 GO:0071456 cellular response to hypoxia(GO:0071456)
0.2 12.9 GO:0009867 jasmonic acid mediated signaling pathway(GO:0009867)
0.2 3.1 GO:0010193 response to ozone(GO:0010193)
0.2 2.3 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.2 4.7 GO:0034976 response to endoplasmic reticulum stress(GO:0034976)
0.1 7.0 GO:0010941 regulation of cell death(GO:0010941)
0.1 3.9 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.1 0.9 GO:0016926 protein desumoylation(GO:0016926)
0.1 2.2 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.1 0.4 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.1 2.3 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 2.6 GO:0090333 regulation of stomatal closure(GO:0090333)
0.1 1.9 GO:0010158 abaxial cell fate specification(GO:0010158)
0.1 0.6 GO:0045739 positive regulation of DNA repair(GO:0045739)
0.1 1.9 GO:0002237 response to molecule of bacterial origin(GO:0002237)
0.1 0.4 GO:0055047 generative cell mitosis(GO:0055047)
0.1 1.4 GO:0048766 root hair initiation(GO:0048766)
0.1 2.8 GO:0006289 nucleotide-excision repair(GO:0006289)
0.1 2.1 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 0.5 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.1 42.8 GO:0016567 protein ubiquitination(GO:0016567)
0.1 2.0 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.1 0.7 GO:0043153 entrainment of circadian clock by photoperiod(GO:0043153)
0.1 0.9 GO:0006598 polyamine catabolic process(GO:0006598)
0.1 2.7 GO:0009756 carbohydrate mediated signaling(GO:0009756) sugar mediated signaling pathway(GO:0010182)
0.1 1.9 GO:0010227 floral organ abscission(GO:0010227)
0.1 1.2 GO:0070370 cellular heat acclimation(GO:0070370)
0.1 0.4 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.1 0.9 GO:0015689 molybdate ion transport(GO:0015689)
0.1 0.9 GO:0098876 vesicle-mediated transport to the plasma membrane(GO:0098876)
0.1 6.2 GO:0048545 brassinosteroid mediated signaling pathway(GO:0009742) steroid hormone mediated signaling pathway(GO:0043401) response to steroid hormone(GO:0048545) cellular response to steroid hormone stimulus(GO:0071383)
0.1 5.8 GO:0048278 vesicle docking(GO:0048278)
0.1 0.6 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.1 2.9 GO:0031124 mRNA 3'-end processing(GO:0031124)
0.1 0.9 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.1 0.5 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.1 30.8 GO:0006511 ubiquitin-dependent protein catabolic process(GO:0006511)
0.1 1.9 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.1 0.4 GO:0046704 CDP metabolic process(GO:0046704) CDP biosynthetic process(GO:0046705)
0.1 0.5 GO:0006290 photoreactive repair(GO:0000719) pyrimidine dimer repair(GO:0006290)
0.1 1.1 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.1 0.6 GO:0042351 'de novo' GDP-L-fucose biosynthetic process(GO:0042351)
0.1 4.3 GO:0006338 chromatin remodeling(GO:0006338)
0.1 0.7 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.1 1.1 GO:0016554 cytidine to uridine editing(GO:0016554)
0.1 5.4 GO:0016036 cellular response to phosphate starvation(GO:0016036)
0.1 1.5 GO:0010187 negative regulation of seed germination(GO:0010187)
0.1 0.3 GO:0009650 UV protection(GO:0009650)
0.1 3.3 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.1 0.3 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.1 3.9 GO:0006749 glutathione metabolic process(GO:0006749)
0.1 2.7 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.1 1.6 GO:0001522 pseudouridine synthesis(GO:0001522)
0.1 2.5 GO:0030091 protein repair(GO:0030091)
0.1 3.0 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.1 1.2 GO:0090332 stomatal closure(GO:0090332)
0.1 3.6 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.1 0.2 GO:0055083 monovalent inorganic anion homeostasis(GO:0055083)
0.1 0.3 GO:0009584 detection of visible light(GO:0009584)
0.1 0.4 GO:0006528 asparagine metabolic process(GO:0006528)
0.1 0.4 GO:0033015 porphyrin-containing compound catabolic process(GO:0006787) tetrapyrrole catabolic process(GO:0033015)
0.1 2.3 GO:0006865 amino acid transport(GO:0006865)
0.1 1.4 GO:0055070 copper ion homeostasis(GO:0055070)
0.1 1.0 GO:0006108 malate metabolic process(GO:0006108)
0.1 0.3 GO:0043462 regulation of ATPase activity(GO:0043462)
0.1 0.7 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.1 0.4 GO:0000212 meiotic spindle organization(GO:0000212)
0.1 0.3 GO:0015739 sialic acid transport(GO:0015739)
0.1 3.9 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.1 0.5 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.1 0.8 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.1 0.8 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.1 1.6 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.1 2.4 GO:0006101 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.1 0.5 GO:0006828 manganese ion transport(GO:0006828)
0.1 0.3 GO:0015893 drug transport(GO:0015893) response to drug(GO:0042493)
0.1 0.5 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.1 0.8 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.1 1.9 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.1 0.7 GO:0052547 negative regulation of peptidase activity(GO:0010466) regulation of proteolysis(GO:0030162) regulation of peptidase activity(GO:0052547)
0.1 0.2 GO:0051205 protein insertion into membrane(GO:0051205)
0.1 1.0 GO:0035265 organ growth(GO:0035265)
0.1 1.0 GO:0015770 sucrose transport(GO:0015770)
0.1 0.2 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 1.4 GO:0043666 regulation of phosphoprotein phosphatase activity(GO:0043666)
0.1 0.9 GO:0060966 regulation of gene silencing by RNA(GO:0060966)
0.1 1.0 GO:0018345 protein palmitoylation(GO:0018345)
0.1 3.3 GO:0009624 response to nematode(GO:0009624)
0.1 0.4 GO:0006415 translational termination(GO:0006415)
0.1 0.3 GO:0042989 sequestering of actin monomers(GO:0042989)
0.1 0.3 GO:0009245 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.1 1.4 GO:0010143 cutin biosynthetic process(GO:0010143)
0.1 0.7 GO:0035304 regulation of protein dephosphorylation(GO:0035304)
0.1 9.7 GO:0046777 protein autophosphorylation(GO:0046777)
0.1 1.0 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.1 0.5 GO:0000077 DNA damage checkpoint(GO:0000077)
0.1 1.6 GO:0006913 nucleocytoplasmic transport(GO:0006913) nuclear transport(GO:0051169)
0.1 0.6 GO:0036065 fucosylation(GO:0036065)
0.1 0.5 GO:1902074 response to salt(GO:1902074)
0.1 0.9 GO:0006119 oxidative phosphorylation(GO:0006119)
0.1 1.0 GO:0007030 Golgi organization(GO:0007030)
0.0 2.4 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 0.5 GO:0002097 tRNA wobble base modification(GO:0002097)
0.0 1.2 GO:0010584 pollen exine formation(GO:0010584)
0.0 0.3 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 0.2 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.0 0.1 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.0 1.0 GO:0006887 exocytosis(GO:0006887)
0.0 0.1 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.0 0.6 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.1 GO:0072387 FAD metabolic process(GO:0046443) flavin adenine dinucleotide metabolic process(GO:0072387)
0.0 0.2 GO:0051568 histone H3-K4 methylation(GO:0051568)
0.0 1.2 GO:0034605 cellular response to heat(GO:0034605)
0.0 3.1 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 1.4 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 1.7 GO:0010260 leaf senescence(GO:0010150) organ senescence(GO:0010260)
0.0 0.6 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.6 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.1 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.0 0.3 GO:0046417 chorismate metabolic process(GO:0046417)
0.0 0.1 GO:0010555 response to mannitol(GO:0010555)
0.0 0.4 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.0 1.6 GO:0080167 response to karrikin(GO:0080167)
0.0 0.6 GO:0016145 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.0 0.1 GO:0010233 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.0 1.0 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.0 0.7 GO:0010118 stomatal movement(GO:0010118)
0.0 0.1 GO:0022610 cell adhesion(GO:0007155) biological adhesion(GO:0022610)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
2.1 12.5 GO:0005776 autophagosome(GO:0005776)
1.3 1.3 GO:0000502 proteasome complex(GO:0000502)
1.1 3.2 GO:0031211 palmitoyltransferase complex(GO:0002178) serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211)
1.0 5.1 GO:0034657 GID complex(GO:0034657)
0.7 4.8 GO:0071006 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.7 1.4 GO:0000791 euchromatin(GO:0000791)
0.6 9.6 GO:0031231 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.6 6.3 GO:0031597 cytosolic proteasome complex(GO:0031597)
0.6 10.7 GO:0005769 early endosome(GO:0005769)
0.6 2.5 GO:0005942 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.6 2.5 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.6 12.8 GO:0005778 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.6 4.8 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.6 2.3 GO:0000835 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.5 1.1 GO:0030132 clathrin coat of coated pit(GO:0030132)
0.5 1.5 GO:0070847 core mediator complex(GO:0070847)
0.5 2.5 GO:0031931 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.5 1.5 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.5 2.3 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.4 11.2 GO:0000781 chromosome, telomeric region(GO:0000781)
0.4 4.0 GO:0089701 U2AF(GO:0089701)
0.4 2.6 GO:0030062 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
0.4 1.7 GO:0005677 chromatin silencing complex(GO:0005677)
0.4 1.6 GO:0012510 trans-Golgi network transport vesicle membrane(GO:0012510)
0.4 8.8 GO:0005771 multivesicular body(GO:0005771)
0.4 5.6 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.4 2.4 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.4 2.7 GO:0000974 Prp19 complex(GO:0000974)
0.4 1.1 GO:0005846 nuclear cap binding complex(GO:0005846)
0.4 1.9 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.4 3.7 GO:0008180 COP9 signalosome(GO:0008180)
0.4 2.6 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.4 2.6 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.4 3.3 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.4 1.4 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.4 5.0 GO:0005682 U5 snRNP(GO:0005682)
0.4 4.2 GO:1903561 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.4 3.2 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.3 1.7 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.3 1.0 GO:0035101 FACT complex(GO:0035101)
0.3 2.7 GO:0005884 actin filament(GO:0005884)
0.3 0.3 GO:0035861 site of double-strand break(GO:0035861)
0.3 5.3 GO:0071011 precatalytic spliceosome(GO:0071011)
0.3 1.3 GO:0030681 nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.3 0.6 GO:0030658 ER to Golgi transport vesicle membrane(GO:0012507) transport vesicle membrane(GO:0030658)
0.3 7.7 GO:0000118 histone deacetylase complex(GO:0000118)
0.3 2.2 GO:0072379 ER membrane insertion complex(GO:0072379)
0.3 2.5 GO:0005784 Sec61 translocon complex(GO:0005784)
0.3 2.2 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.3 4.8 GO:0031011 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.3 4.2 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.3 2.0 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.3 3.2 GO:0000109 nucleotide-excision repair complex(GO:0000109)
0.3 11.3 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.3 2.6 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.3 1.7 GO:0017053 transcriptional repressor complex(GO:0017053)
0.3 1.9 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.3 1.1 GO:0032044 DSIF complex(GO:0032044)
0.3 3.4 GO:0030136 clathrin-coated vesicle(GO:0030136)
0.3 5.6 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.3 0.5 GO:0098553 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.2 8.4 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.2 0.7 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.2 1.0 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.2 1.0 GO:0018444 translation release factor complex(GO:0018444)
0.2 4.4 GO:0030427 site of polarized growth(GO:0030427)
0.2 0.7 GO:0032301 MutSalpha complex(GO:0032301)
0.2 2.7 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.2 1.8 GO:0010445 nuclear dicing body(GO:0010445)
0.2 1.3 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.2 1.1 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.2 35.0 GO:0000325 plant-type vacuole(GO:0000325)
0.2 0.9 GO:0005765 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.2 7.7 GO:0009504 cell plate(GO:0009504)
0.2 1.9 GO:0030118 clathrin coat(GO:0030118) clathrin adaptor complex(GO:0030131)
0.2 1.5 GO:0016363 nuclear matrix(GO:0016363)
0.2 7.3 GO:0000137 Golgi cis cisterna(GO:0000137)
0.2 1.6 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.2 2.4 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.2 1.0 GO:0044438 microbody part(GO:0044438) peroxisomal part(GO:0044439)
0.2 1.2 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.2 1.7 GO:0022624 proteasome regulatory particle(GO:0005838) proteasome accessory complex(GO:0022624)
0.2 0.8 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.2 1.7 GO:0009368 endopeptidase Clp complex(GO:0009368)
0.2 12.8 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.2 2.0 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.2 1.1 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.2 1.7 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.2 16.5 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.2 1.4 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.2 2.8 GO:0000786 nucleosome(GO:0000786)
0.2 2.2 GO:0005801 cis-Golgi network(GO:0005801)
0.2 1.2 GO:0031298 replication fork protection complex(GO:0031298)
0.2 1.1 GO:0030014 CCR4-NOT complex(GO:0030014)
0.2 1.1 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.2 1.3 GO:0030127 COPII vesicle coat(GO:0030127)
0.2 0.8 GO:0030141 secretory granule(GO:0030141)
0.2 1.1 GO:0000445 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.2 1.8 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.2 0.9 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.2 1.4 GO:0000124 SAGA complex(GO:0000124)
0.2 1.8 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.1 0.4 GO:0030897 HOPS complex(GO:0030897)
0.1 0.6 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.1 1.4 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.1 1.1 GO:0046540 U4/U6 x U5 tri-snRNP complex(GO:0046540)
0.1 2.4 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 6.4 GO:0010008 endosome membrane(GO:0010008)
0.1 1.8 GO:0045273 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.1 1.0 GO:0000439 core TFIIH complex(GO:0000439)
0.1 2.3 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.1 0.6 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.1 9.3 GO:0016604 nuclear body(GO:0016604)
0.1 0.7 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.1 0.8 GO:0005787 signal peptidase complex(GO:0005787)
0.1 2.0 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.1 6.8 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.1 4.1 GO:0016591 DNA-directed RNA polymerase II, holoenzyme(GO:0016591)
0.1 1.4 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.1 8.3 GO:0005635 nuclear envelope(GO:0005635)
0.1 2.1 GO:0000123 histone acetyltransferase complex(GO:0000123)
0.1 0.9 GO:0034708 methyltransferase complex(GO:0034708)
0.1 0.7 GO:0008023 transcription elongation factor complex(GO:0008023)
0.1 14.2 GO:0000785 chromatin(GO:0000785)
0.1 3.0 GO:0000138 Golgi trans cisterna(GO:0000138)
0.1 9.1 GO:0033647 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.1 0.6 GO:0070552 BRISC complex(GO:0070552)
0.1 12.6 GO:0005654 nucleoplasm(GO:0005654)
0.1 0.7 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.1 6.7 GO:0005681 spliceosomal complex(GO:0005681)
0.1 1.3 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.1 7.2 GO:0000151 ubiquitin ligase complex(GO:0000151)
0.1 3.4 GO:0031227 intrinsic component of endoplasmic reticulum membrane(GO:0031227)
0.1 0.6 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.1 0.9 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.1 0.5 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.1 0.8 GO:0042575 DNA polymerase complex(GO:0042575)
0.1 1.3 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 0.5 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.1 3.3 GO:0090406 pollen tube(GO:0090406)
0.1 2.8 GO:0000139 Golgi membrane(GO:0000139)
0.1 1.4 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.1 0.8 GO:0032040 small-subunit processome(GO:0032040)
0.1 0.5 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 9.9 GO:0005768 endosome(GO:0005768)
0.0 1.6 GO:0009524 phragmoplast(GO:0009524)
0.0 5.8 GO:0005789 endoplasmic reticulum membrane(GO:0005789)
0.0 1.6 GO:0005667 transcription factor complex(GO:0005667)
0.0 0.6 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 20.7 GO:0005783 endoplasmic reticulum(GO:0005783)
0.0 0.2 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.1 GO:0097361 CIA complex(GO:0097361)
0.0 2.3 GO:0044421 extracellular region part(GO:0044421)
0.0 70.8 GO:0005829 cytosol(GO:0005829)
0.0 0.4 GO:0005741 mitochondrial outer membrane(GO:0005741)
0.0 2.5 GO:0005730 nucleolus(GO:0005730)
0.0 0.1 GO:0005758 mitochondrial intermembrane space(GO:0005758)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.9 8.6 GO:0000064 L-ornithine transmembrane transporter activity(GO:0000064) azole transmembrane transporter activity(GO:1901474)
2.2 11.1 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
2.1 14.7 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
1.9 5.6 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
1.8 7.3 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
1.8 5.4 GO:0010354 homogentisate prenyltransferase activity(GO:0010354)
1.6 4.8 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
1.5 4.5 GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
1.5 5.9 GO:0046481 digalactosyldiacylglycerol synthase activity(GO:0046481)
1.5 5.8 GO:0004348 glucosylceramidase activity(GO:0004348)
1.4 8.2 GO:0015369 calcium:proton antiporter activity(GO:0015369)
1.2 4.9 GO:0008301 DNA binding, bending(GO:0008301)
1.1 11.6 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
1.1 3.2 GO:0008481 sphinganine kinase activity(GO:0008481)
1.0 3.1 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
1.0 7.1 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
1.0 3.0 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
1.0 2.9 GO:0016992 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.9 6.6 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.9 6.5 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.9 10.0 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
0.9 2.7 GO:0035615 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.9 3.5 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.9 8.7 GO:0017070 U6 snRNA binding(GO:0017070)
0.9 2.6 GO:0070003 threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.8 5.9 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.8 5.1 GO:0018488 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.8 4.1 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.8 8.2 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.8 4.0 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.8 7.2 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.8 4.7 GO:0030527 structural constituent of chromatin(GO:0030527)
0.8 2.3 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.8 5.4 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.7 1.5 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.7 2.9 GO:0070034 telomerase RNA binding(GO:0070034)
0.7 2.2 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.7 12.4 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.7 3.5 GO:0047780 citrate dehydratase activity(GO:0047780)
0.7 4.8 GO:0052852 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.7 3.4 GO:0009883 red or far-red light photoreceptor activity(GO:0009883)
0.7 5.3 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.7 3.9 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.6 2.5 GO:0004445 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.6 3.2 GO:0004758 serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454)
0.6 1.9 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.6 1.8 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.6 0.6 GO:0003994 aconitate hydratase activity(GO:0003994)
0.6 1.8 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.6 2.4 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.6 4.7 GO:0001653 peptide receptor activity(GO:0001653)
0.6 7.0 GO:0016157 sucrose synthase activity(GO:0016157)
0.6 1.7 GO:0008517 folic acid transporter activity(GO:0008517)
0.6 2.3 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.6 1.2 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.6 1.7 GO:0030941 chloroplast targeting sequence binding(GO:0030941)
0.6 1.7 GO:0003856 3-dehydroquinate synthase activity(GO:0003856)
0.6 7.3 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.6 1.7 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.6 2.8 GO:0008309 double-stranded DNA exodeoxyribonuclease activity(GO:0008309)
0.6 3.3 GO:0052655 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.5 2.2 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.5 1.6 GO:0016504 peptidase activator activity(GO:0016504)
0.5 2.2 GO:0016649 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.5 5.4 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.5 4.8 GO:0009881 photoreceptor activity(GO:0009881) blue light photoreceptor activity(GO:0009882)
0.5 2.6 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
0.5 4.7 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.5 1.5 GO:0033984 indole-3-glycerol-phosphate lyase activity(GO:0033984)
0.5 2.5 GO:0005355 glucose transmembrane transporter activity(GO:0005355)
0.5 8.2 GO:0035064 methylated histone binding(GO:0035064)
0.5 3.8 GO:0032266 phosphatidylinositol-3-phosphate binding(GO:0032266)
0.5 1.4 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.5 2.3 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.4 2.2 GO:0034511 U3 snoRNA binding(GO:0034511)
0.4 2.2 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.4 5.8 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.4 1.8 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.4 3.9 GO:0004096 catalase activity(GO:0004096)
0.4 3.9 GO:0048256 flap endonuclease activity(GO:0048256)
0.4 3.0 GO:0004470 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471)
0.4 3.0 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.4 1.7 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.4 6.4 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.4 1.7 GO:0008460 dTDP-glucose 4,6-dehydratase activity(GO:0008460)
0.4 5.0 GO:0030515 snoRNA binding(GO:0030515)
0.4 1.2 GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725)
0.4 1.2 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.4 1.7 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.4 3.7 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.4 1.6 GO:0035516 oxidative DNA demethylase activity(GO:0035516)
0.4 16.2 GO:0004707 MAP kinase activity(GO:0004707)
0.4 2.0 GO:0035620 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.4 2.4 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.4 1.6 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.4 1.2 GO:0004438 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.4 6.3 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.4 2.0 GO:0080115 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.4 1.2 GO:0001056 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.4 4.2 GO:0030674 protein binding, bridging(GO:0030674)
0.4 4.6 GO:0003996 acyl-CoA ligase activity(GO:0003996) decanoate--CoA ligase activity(GO:0102391)
0.4 17.5 GO:0017137 Rab GTPase binding(GO:0017137)
0.4 3.4 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.4 20.5 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.4 0.7 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.4 6.1 GO:0015217 ADP transmembrane transporter activity(GO:0015217)
0.4 1.4 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.4 1.4 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity(GO:0010309)
0.4 1.1 GO:0050997 phosphatidylcholine binding(GO:0031210) quaternary ammonium group binding(GO:0050997)
0.4 1.8 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.4 2.1 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.3 3.5 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.3 1.0 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.3 1.3 GO:0008251 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.3 4.0 GO:0030628 pre-mRNA 3'-splice site binding(GO:0030628)
0.3 2.0 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.3 1.6 GO:0035242 protein-arginine omega-N asymmetric methyltransferase activity(GO:0035242)
0.3 1.6 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.3 1.0 GO:0045174 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.3 1.0 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.3 1.6 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.3 1.6 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.3 1.5 GO:0030371 translation repressor activity(GO:0030371)
0.3 3.4 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.3 3.6 GO:0008061 chitin binding(GO:0008061)
0.3 4.5 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.3 2.4 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.3 3.6 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.3 19.4 GO:0043130 ubiquitin binding(GO:0043130)
0.3 2.9 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.3 3.2 GO:1901981 phosphatidylinositol phosphate binding(GO:1901981)
0.3 1.7 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.3 0.8 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.3 2.8 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.3 2.2 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.3 1.4 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.3 2.2 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.3 1.1 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.3 1.8 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.3 0.8 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.3 1.6 GO:0042162 telomeric DNA binding(GO:0042162)
0.3 8.9 GO:0003714 transcription corepressor activity(GO:0003714)
0.3 5.7 GO:0031491 nucleosome binding(GO:0031491)
0.3 1.0 GO:0000035 acyl binding(GO:0000035)
0.3 1.5 GO:0004449 isocitrate dehydrogenase activity(GO:0004448) isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.3 5.9 GO:0030414 peptidase inhibitor activity(GO:0030414) peptidase regulator activity(GO:0061134)
0.2 0.7 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.2 1.0 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.2 1.7 GO:0032977 membrane insertase activity(GO:0032977)
0.2 1.5 GO:0030544 Hsp70 protein binding(GO:0030544)
0.2 14.9 GO:0036459 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.2 3.6 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.2 2.6 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.2 5.3 GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen(GO:0016701)
0.2 1.0 GO:0047714 galactolipase activity(GO:0047714)
0.2 0.7 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.2 1.6 GO:0051087 chaperone binding(GO:0051087)
0.2 5.6 GO:0008066 glutamate receptor activity(GO:0008066)
0.2 3.3 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.2 0.7 GO:0032405 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.2 16.0 GO:0015662 ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism(GO:0015662)
0.2 2.4 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.2 2.7 GO:0051117 ATPase binding(GO:0051117)
0.2 4.2 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.2 1.5 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.2 32.5 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.2 38.8 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.2 0.8 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.2 3.9 GO:0008536 Ran GTPase binding(GO:0008536)
0.2 0.8 GO:0035197 siRNA binding(GO:0035197)
0.2 0.8 GO:0070139 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.2 1.4 GO:0016149 translation release factor activity, codon specific(GO:0016149)
0.2 2.2 GO:0031490 chromatin DNA binding(GO:0031490)
0.2 1.2 GO:0060090 binding, bridging(GO:0060090)
0.2 0.6 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.2 0.6 GO:0046920 alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.2 1.5 GO:0070122 isopeptidase activity(GO:0070122)
0.2 2.4 GO:0016755 transferase activity, transferring amino-acyl groups(GO:0016755)
0.2 11.8 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.2 3.5 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.2 1.4 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.2 1.8 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.2 3.0 GO:0030276 clathrin binding(GO:0030276)
0.2 5.9 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.2 4.2 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.2 1.4 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.2 0.2 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.2 2.5 GO:0019903 protein phosphatase binding(GO:0019903)
0.2 2.5 GO:0008327 methyl-CpG binding(GO:0008327)
0.2 4.0 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.2 2.1 GO:0017069 snRNA binding(GO:0017069)
0.2 3.8 GO:0043424 protein histidine kinase binding(GO:0043424)
0.2 13.7 GO:0000989 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.2 4.7 GO:0005096 GTPase activator activity(GO:0005096)
0.2 0.6 GO:0015245 fatty acid transporter activity(GO:0015245)
0.2 1.2 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.2 8.6 GO:0005484 SNAP receptor activity(GO:0005484)
0.2 7.5 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.2 0.8 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.2 5.3 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.1 3.3 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.1 1.0 GO:0060229 phospholipase activator activity(GO:0016004) lipase activator activity(GO:0060229)
0.1 1.2 GO:0042299 lupeol synthase activity(GO:0042299)
0.1 1.3 GO:0010485 H4 histone acetyltransferase activity(GO:0010485)
0.1 1.7 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.1 0.9 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 4.2 GO:0003684 damaged DNA binding(GO:0003684)
0.1 0.7 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.1 1.4 GO:0008318 protein prenyltransferase activity(GO:0008318)
0.1 0.3 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 15.2 GO:0046982 protein heterodimerization activity(GO:0046982)
0.1 1.5 GO:0032452 histone demethylase activity(GO:0032452) histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 0.9 GO:0046592 polyamine oxidase activity(GO:0046592)
0.1 5.2 GO:0031072 heat shock protein binding(GO:0031072)
0.1 1.9 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.1 0.9 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.1 7.4 GO:0004364 glutathione transferase activity(GO:0004364)
0.1 1.3 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.1 0.4 GO:0004106 chorismate mutase activity(GO:0004106)
0.1 0.6 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.1 0.8 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.1 2.4 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.1 0.3 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.1 1.2 GO:0043878 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity(GO:0043878)
0.1 1.0 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.1 0.9 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.1 0.6 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.1 0.3 GO:0050577 GDP-L-fucose synthase activity(GO:0050577)
0.1 0.3 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.1 1.9 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 3.9 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 1.2 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 4.1 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 0.9 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 3.7 GO:0043022 ribosome binding(GO:0043022)
0.1 2.3 GO:0008143 poly(A) binding(GO:0008143)
0.1 0.5 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.1 0.7 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.1 0.9 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.1 0.4 GO:0033862 UMP kinase activity(GO:0033862)
0.1 0.6 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.1 40.6 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.1 0.8 GO:0000339 RNA cap binding(GO:0000339)
0.1 0.3 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.1 1.0 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.1 4.1 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.1 1.6 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 0.7 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.1 0.3 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 0.3 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.1 0.6 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 1.1 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.1 0.7 GO:0004526 ribonuclease P activity(GO:0004526)
0.1 1.6 GO:0042393 histone binding(GO:0042393)
0.1 0.8 GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor(GO:0016624)
0.1 1.0 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.1 6.0 GO:0003682 chromatin binding(GO:0003682)
0.1 0.4 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 1.0 GO:0005548 phospholipid transporter activity(GO:0005548)
0.1 0.5 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.1 0.7 GO:0005543 phospholipid binding(GO:0005543)
0.1 1.6 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.1 1.7 GO:0010333 terpene synthase activity(GO:0010333)
0.1 0.3 GO:0004385 guanylate kinase activity(GO:0004385)
0.1 2.7 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.1 0.7 GO:0016885 CoA carboxylase activity(GO:0016421) ligase activity, forming carbon-carbon bonds(GO:0016885)
0.1 0.2 GO:0015296 anion:cation symporter activity(GO:0015296) cation:chloride symporter activity(GO:0015377)
0.1 1.0 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.1 1.9 GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor(GO:0016671)
0.1 5.3 GO:0051082 unfolded protein binding(GO:0051082)
0.1 0.2 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.1 0.2 GO:0000009 alpha-1,6-mannosyltransferase activity(GO:0000009)
0.1 0.1 GO:0016929 SUMO-specific protease activity(GO:0016929)
0.1 1.5 GO:0000049 tRNA binding(GO:0000049)
0.1 9.4 GO:0004721 phosphoprotein phosphatase activity(GO:0004721)
0.1 0.8 GO:0019905 syntaxin binding(GO:0019905)
0.1 0.3 GO:0000149 SNARE binding(GO:0000149)
0.1 0.2 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.1 0.6 GO:0036442 hydrogen-exporting ATPase activity(GO:0036442)
0.1 0.3 GO:0003785 actin monomer binding(GO:0003785)
0.1 29.6 GO:0044212 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)
0.0 2.0 GO:0080044 quercetin 7-O-glucosyltransferase activity(GO:0080044)
0.0 0.6 GO:0003951 NAD+ kinase activity(GO:0003951)
0.0 0.7 GO:0034594 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485) phosphatidylinositol trisphosphate phosphatase activity(GO:0034594)
0.0 0.2 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.0 0.3 GO:0004806 triglyceride lipase activity(GO:0004806)
0.0 3.0 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.2 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.0 0.3 GO:0016208 AMP binding(GO:0016208)
0.0 0.7 GO:0016790 thiolester hydrolase activity(GO:0016790)
0.0 0.2 GO:0004849 uridine kinase activity(GO:0004849)
0.0 4.3 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 3.6 GO:0003779 actin binding(GO:0003779)
0.0 0.1 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.0 0.1 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.0 0.1 GO:0005223 intracellular cGMP activated cation channel activity(GO:0005223)
0.0 0.5 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 1.6 GO:0016298 lipase activity(GO:0016298)
0.0 0.7 GO:0001871 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 1.1 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 2.0 GO:0043492 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances(GO:0016820) ATPase activity, coupled to transmembrane movement of substances(GO:0042626) ATPase activity, coupled to movement of substances(GO:0043492)
0.0 1.5 GO:0004497 monooxygenase activity(GO:0004497)
0.0 0.4 GO:0031386 protein tag(GO:0031386)
0.0 0.1 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 0.2 GO:0015248 sterol transporter activity(GO:0015248)
0.0 2.3 GO:0005507 copper ion binding(GO:0005507)
0.0 4.6 GO:0043565 sequence-specific DNA binding(GO:0043565)
0.0 0.4 GO:0019901 protein kinase binding(GO:0019901)
0.0 0.6 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.7 5.2 PID A6B1 A6B4 INTEGRIN PATHWAY a6b1 and a6b4 Integrin signaling
1.4 7.0 PID S1P META PATHWAY Sphingosine 1-phosphate (S1P) pathway
1.2 8.1 PID MTOR 4PATHWAY mTOR signaling pathway
0.8 3.8 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.6 1.9 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.6 1.2 PID ATF2 PATHWAY ATF-2 transcription factor network
0.3 1.0 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.3 2.3 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.3 1.0 PID MYC PATHWAY C-MYC pathway
0.3 1.1 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.3 3.2 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.2 1.7 PID MET PATHWAY Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met)
0.1 0.2 PID TRKR PATHWAY Neurotrophic factor-mediated Trk receptor signaling
0.1 0.3 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton
0.1 0.3 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 6.6 REACTOME BILE ACID AND BILE SALT METABOLISM Genes involved in Bile acid and bile salt metabolism
1.1 3.2 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
1.0 4.2 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
1.0 1.9 REACTOME CIRCADIAN CLOCK Genes involved in Circadian Clock
0.6 1.9 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.5 3.7 REACTOME RESOLUTION OF AP SITES VIA THE MULTIPLE NUCLEOTIDE PATCH REPLACEMENT PATHWAY Genes involved in Resolution of AP sites via the multiple-nucleotide patch replacement pathway
0.5 4.1 REACTOME RNA POL II TRANSCRIPTION PRE INITIATION AND PROMOTER OPENING Genes involved in RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
0.4 1.3 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.4 2.2 REACTOME PI METABOLISM Genes involved in PI Metabolism
0.4 1.3 REACTOME TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRONLESS TRANSCRIPT Genes involved in Transport of Mature mRNA Derived from an Intronless Transcript
0.4 1.4 REACTOME CITRIC ACID CYCLE TCA CYCLE Genes involved in Citric acid cycle (TCA cycle)
0.4 1.1 REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC
0.3 1.2 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.3 1.3 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.2 7.0 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.2 0.4 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.2 1.5 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.1 1.2 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.1 0.3 REACTOME HOST INTERACTIONS OF HIV FACTORS Genes involved in Host Interactions of HIV factors
0.1 1.9 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 0.3 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.1 0.2 REACTOME DOWNSTREAM SIGNALING OF ACTIVATED FGFR Genes involved in Downstream signaling of activated FGFR