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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT1G03800

Z-value: 1.64

Transcription factors associated with AT1G03800

Gene Symbol Gene ID Gene Info
AT1G03800
AT1G03800 ERF domain protein 10

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ERF10arTal_v1_Chr1_-_958383_9583830.375.0e-02Click!

Activity profile of AT1G03800 motif

Sorted Z-values of AT1G03800 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_-_18098633 8.98 AT4G38770.1
PRP4
proline-rich protein 4
Chr3_+_5505360 8.80 AT3G16240.1
DELTA-TIP
delta tonoplast integral protein
Chr5_-_9082384 7.92 AT5G26000.1
AT5G26000.2
TGG1
thioglucoside glucohydrolase 1
Chr2_-_16950705 7.68 AT2G40610.1
EXPA8
expansin A8
Chr4_-_7493080 6.82 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
Chr2_-_18744322 6.76 AT2G45470.1
FLA8
FASCICLIN-like arabinogalactan protein 8
Chr1_-_4090857 6.60 AT1G12090.1
ELP
extensin-like protein
Chr3_-_21523375 6.49 AT3G58120.2
AT3G58120.1
BZIP61
Basic-leucine zipper (bZIP) transcription factor family protein
Chr3_-_11013451 6.24 AT3G29030.1
EXPA5
expansin A5
Chr5_+_17760865 6.07 AT5G44130.1
FLA13
FASCICLIN-like arabinogalactan protein 13 precursor
Chr5_-_22560461 5.97 AT5G55730.2
AT5G55730.1
FLA1
FASCICLIN-like arabinogalactan 1
Chr3_-_4008018 5.84 AT3G12610.1
DRT100
Leucine-rich repeat (LRR) family protein
Chr3_-_3357754 5.75 AT3G10720.2
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_+_2199151 5.66 AT2G05790.1
AT2G05790
O-Glycosyl hydrolases family 17 protein
Chr2_+_8940833 5.66 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
Chr5_+_4087689 5.62 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
Chr5_+_26767599 5.50 AT5G67070.1
RALFL34
ralf-like 34
Chr1_-_7531108 5.47 AT1G21500.1
AT1G21500
hypothetical protein
Chr3_+_17228642 5.44 AT3G46780.1
PTAC16
plastid transcriptionally active 16
Chr3_+_23345754 5.27 AT3G63200.1
PLP9
PATATIN-like protein 9
Chr1_-_27853233 5.12 AT1G74070.2
AT1G74070.1
AT1G74070
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr4_-_5779462 4.90 AT4G09010.1
AT4G09010.2
AT4G09010.3
TL29
ascorbate peroxidase 4
Chr3_-_3356811 4.89 AT3G10720.1
AT3G10720
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_-_15137012 4.81 AT2G36050.1
OFP15
ovate family protein 15
Chr1_+_7252111 4.81 AT1G20850.1
XCP2
xylem cysteine peptidase 2
Chr5_+_152446 4.73 AT5G01370.1
ACI1
ALC-interacting protein 1
Chr2_-_15789605 4.72 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
Chr1_+_25401514 4.71 AT1G67750.1
AT1G67750
Pectate lyase family protein
Chr3_-_4744263 4.70 AT3G14240.1
AT3G14240
Subtilase family protein
Chr2_-_15790139 4.67 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
Chr1_-_4530222 4.65 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr4_+_6100714 4.65 AT4G09650.1
ATPD
F-type H+-transporting ATPase subunit delta
Chr5_-_25373904 4.63 AT5G63310.1
NDPK2
nucleoside diphosphate kinase 2
Chr5_+_7502427 4.58 AT5G22580.1
AT5G22580
Stress responsive A/B Barrel Domain-containing protein
Chr3_+_18262290 4.55 AT3G49260.1
AT3G49260.3
AT3G49260.2
AT3G49260.4
iqd21
IQ-domain 21
Chr4_-_8307934 4.53 AT4G14440.1
HCD1
3-hydroxyacyl-CoA dehydratase 1
Chr1_-_464981 4.42 AT1G02335.1
GL22
germin-like protein subfamily 2 member 2 precursor
Chr3_-_19595834 4.38 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
Chr3_+_19421397 4.37 AT3G52380.1
CP33
chloroplast RNA-binding protein 33
Chr5_-_7026533 4.35 AT5G20740.1
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_-_15617149 4.33 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_23328789 4.31 AT3G63140.1
CSP41A
chloroplast stem-loop binding protein of 41 kDa
Chr1_+_9421009 4.30 AT1G27120.1
AT1G27120.2
AT1G27120
Galactosyltransferase family protein
Chr3_-_15617309 4.28 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_310169 4.27 AT1G01900.1
SBTI1.1
subtilase family protein
Chr4_+_9556783 4.27 AT4G16980.1
AT4G16980
arabinogalactan-protein family
Chr1_+_898480 4.26 AT1G03600.1
PSB27
photosystem II family protein
Chr3_+_3698658 4.23 AT3G11700.1
FLA18
FASCICLIN-like arabinogalactan protein 18 precursor
Chr3_-_1136397 4.20 AT3G04290.1
LTL1
Li-tolerant lipase 1
Chr5_-_671687 4.18 AT5G02890.1
AT5G02890
HXXXD-type acyl-transferase family protein
Chr2_+_1594588 4.17 AT2G04570.1
AT2G04570
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_+_8586359 4.14 AT3G23805.1
RALFL24
ralf-like 24
Chr2_+_14216771 4.13 AT2G33570.1
GALS1
glycosyltransferase family protein (DUF23)
Chr1_+_3664187 4.13 AT1G10960.1
FD1
ferredoxin 1
Chr2_-_19563960 4.12 AT2G47750.1
GH3.9
putative indole-3-acetic acid-amido synthetase GH3.9
Chr1_+_11532199 4.11 AT1G32060.1
PRK
phosphoribulokinase
Chr1_+_16871696 4.10 AT1G44575.2
NPQ4
Chlorophyll A-B binding family protein
Chr1_+_16871511 4.09 AT1G44575.3
NPQ4
Chlorophyll A-B binding family protein
Chr5_-_753657 4.07 AT5G03170.1
FLA11
FASCICLIN-like arabinogalactan-protein 11
Chr1_-_26515188 4.07 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr1_+_16870221 4.06 AT1G44575.1
NPQ4
Chlorophyll A-B binding family protein
Chr5_-_7026753 4.06 AT5G20740.2
AT5G20740
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr5_+_19825078 4.04 AT5G48900.1
AT5G48900
Pectin lyase-like superfamily protein
Chr1_-_4265156 4.04 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
Chr5_+_2680401 4.03 AT5G08330.1
TCP11
TCP family transcription factor
Chr5_+_2803833 4.03 AT5G08640.1
AT5G08640.2
FLS1
flavonol synthase 1
Chr1_-_15607966 3.98 AT1G41830.1
SKS6
SKU5-similar 6
Chr1_+_28428671 3.97 AT1G75710.1
AT1G75710
C2H2-like zinc finger protein
Chr5_-_24990331 3.97 AT5G62220.1
GT18
glycosyltransferase 18
Chr1_+_2249133 3.97 AT1G07320.2
AT1G07320.3
AT1G07320.4
RPL4
ribosomal protein L4
Chr3_+_6180621 3.95 AT3G18050.1
AT3G18050
GPI-anchored protein
Chr3_+_5314817 3.95 AT3G15680.1
AT3G15680.2
AT3G15680
Ran BP2/NZF zinc finger-like superfamily protein
Chr1_+_10810877 3.94 AT1G30520.4
AT1G30520.3
AAE14
acyl-activating enzyme 14
Chr3_-_6436046 3.94 AT3G18710.1
PUB29
plant U-box 29
Chr4_-_18067873 3.92 AT4G38660.2
AT4G38660
Pathogenesis-related thaumatin superfamily protein
Chr1_+_25574381 3.92 AT1G68238.1
AT1G68238
transmembrane protein
Chr3_-_19467455 3.91 AT3G52500.1
AT3G52500
Eukaryotic aspartyl protease family protein
Chr5_-_21068327 3.90 AT5G51820.1
PGM
phosphoglucomutase
Chr2_+_13647699 3.89 AT2G32100.1
OFP16
ovate family protein 16
Chr5_+_5078200 3.89 AT5G15600.1
AT5G15600.2
SP1L4
SPIRAL1-like4
Chr4_+_160643 3.86 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr2_+_19191247 3.85 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr5_-_2993213 3.84 AT5G09650.1
PPa6
pyrophosphorylase 6
Chr4_+_14017343 3.84 AT4G28310.1
AT4G28310
microtubule-associated protein
Chr3_-_5469594 3.84 AT3G16140.1
PSAH-1
photosystem I subunit H-1
Chr1_+_4899045 3.84 AT1G14345.1
AT1G14345
NAD(P)-linked oxidoreductase superfamily protein
Chr3_-_20576249 3.82 AT3G55500.1
EXPA16
expansin A16
Chr5_+_18430717 3.82 AT5G45490.1
AT5G45490
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_-_18068293 3.82 AT4G38660.1
AT4G38660
Pathogenesis-related thaumatin superfamily protein
Chr1_+_10810397 3.82 AT1G30520.1
AT1G30520.2
AAE14
acyl-activating enzyme 14
Chr3_-_8902835 3.80 AT3G24480.1
AT3G24480
Leucine-rich repeat (LRR) family protein
Chr1_+_2248967 3.80 AT1G07320.1
RPL4
ribosomal protein L4
Chr1_-_28554810 3.78 AT1G76100.1
AT1G76100.2
PETE1
plastocyanin 1
Chr5_+_1952505 3.77 AT5G06390.1
FLA17
FASCICLIN-like arabinogalactan protein 17 precursor
Chr3_+_2564153 3.75 AT3G08030.2
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr3_+_2563803 3.73 AT3G08030.1
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr1_+_5489145 3.73 AT1G15980.1
PnsB1
NDH-dependent cyclic electron flow 1
Chr1_-_22317070 3.73 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr3_-_5252697 3.71 AT3G15520.1
AT3G15520.2
AT3G15520.3
AT3G15520
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr3_+_21076505 3.70 AT3G56940.1
AT3G56940.2
CRD1
dicarboxylate diiron protein, putative (Crd1)
Chr1_-_28581315 3.69 AT1G76160.1
sks5
SKU5 similar 5
Chr5_+_20945676 3.68 AT5G51560.1
AT5G51560
Leucine-rich repeat protein kinase family protein
Chr2_+_19521774 3.68 AT2G47590.1
PHR2
photolyase/blue-light receptor 2
Chr3_+_18973126 3.68 AT3G51080.1
GATA6
GATA transcription factor 6
Chr4_+_15819489 3.68 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
Chr4_-_10278794 3.64 AT4G18670.1
AT4G18670
Leucine-rich repeat (LRR) family protein
Chr3_+_188321 3.64 AT3G01480.1
AT3G01480.2
CYP38
cyclophilin 38
Chr5_+_15742543 3.64 AT5G39320.1
UDG4
UDP-glucose 6-dehydrogenase family protein
Chr1_+_9259750 3.59 AT1G26770.2
EXPA10
expansin A10
Chr4_-_15429113 3.59 AT4G31890.2
AT4G31890.1
AT4G31890.3
AT4G31890
ARM repeat superfamily protein
Chr2_-_15797059 3.59 AT2G37660.1
AT2G37660
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_-_2130451 3.58 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr5_+_18429047 3.58 AT5G45490.2
AT5G45490
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_-_5310951 3.57 AT5G16250.1
AT5G16250
transmembrane protein
Chr4_+_7521257 3.57 AT4G12800.2
AT4G12800.1
PSAL
photosystem I subunit l
Chr2_+_15445294 3.56 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr5_-_3278461 3.54 AT5G10430.1
AGP4
arabinogalactan protein 4
Chr5_-_3183484 3.54 AT5G10150.3
AT5G10150.4
AT5G10150
UPSTREAM OF FLC protein (DUF966)
Chr4_+_9803624 3.54 AT4G17600.1
LIL3:1
Chlorophyll A-B binding family protein
Chr4_-_13398307 3.53 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
Chr4_+_12876822 3.52 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
Chr1_-_1169034 3.51 AT1G04360.1
AT1G04360
RING/U-box superfamily protein
Chr1_-_227302 3.51 AT1G01620.2
PIP1C
plasma membrane intrinsic protein 1C
Chr3_-_18559326 3.51 AT3G50060.1
MYB77
myb domain protein 77
Chr1_-_227543 3.50 AT1G01620.1
PIP1C
plasma membrane intrinsic protein 1C
Chr1_+_29117500 3.50 AT1G77490.1
AT1G77490.2
TAPX
thylakoidal ascorbate peroxidase
Chr1_+_25374072 3.49 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
AT1G67700
multidrug resistance protein
Chr5_-_3183984 3.49 AT5G10150.2
AT5G10150.1
AT5G10150
UPSTREAM OF FLC protein (DUF966)
Chr1_+_7696427 3.48 AT1G21910.1
DREB26
Integrase-type DNA-binding superfamily protein
Chr1_+_9534488 3.46 AT1G27460.2
AT1G27460.1
AT1G27460.3
NPGR1
no pollen germination related 1
Chr5_+_6387341 3.45 AT5G19090.1
AT5G19090.4
AT5G19090.3
AT5G19090.2
AT5G19090
Heavy metal transport/detoxification superfamily protein
Chr1_+_9259432 3.45 AT1G26770.1
EXPA10
expansin A10
Chr3_-_21949796 3.44 AT3G59400.1
GUN4
protein GENOMES UNCOUPLED 4
Chr3_+_3479673 3.41 AT3G11110.1
AT3G11110
RING/U-box superfamily protein
Chr5_-_7047446 3.40 AT5G20820.1
AT5G20820
SAUR-like auxin-responsive protein family
Chr4_+_10651744 3.39 AT4G19530.1
AT4G19530.2
AT4G19530
disease resistance protein (TIR-NBS-LRR class) family
Chr3_-_22972239 3.39 AT3G62020.2
AT3G62020.1
GLP10
germin-like protein 10
Chr5_+_26646900 3.38 AT5G66740.1
AT5G66740
spindle assembly abnormal protein (DUF620)
Chr4_-_7591259 3.38 AT4G12980.1
AT4G12980
Auxin-responsive family protein
Chr1_+_21028137 3.37 AT1G56190.1
AT1G56190.2
AT1G56190
Phosphoglycerate kinase family protein
Chr1_-_3518035 3.37 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
Chr5_-_4061950 3.36 AT5G12860.2
DiT1
dicarboxylate transporter 1
Chr1_-_21266368 3.34 AT1G56720.2
AT1G56720.4
AT1G56720
Protein kinase superfamily protein
Chr2_-_5051613 3.34 AT2G12462.1
AT2G12462
sterile alpha motif (SAM) domain protein
Chr5_-_2182538 3.34 AT5G07020.1
AT5G07020
proline-rich family protein
Chr5_-_20940895 3.33 AT5G51550.1
EXL3
EXORDIUM like 3
Chr4_-_14439723 3.33 AT4G29310.1
AT4G29310.2
AT4G29310
DUF1005 family protein (DUF1005)
Chr2_+_19145218 3.33 AT2G46630.1
AT2G46630
serine/arginine repetitive matrix protein
Chr5_-_4062289 3.33 AT5G12860.1
DiT1
dicarboxylate transporter 1
Chr3_+_20016837 3.32 AT3G54050.1
AT3G54050.2
HCEF1
high cyclic electron flow 1
Chr2_-_12785037 3.31 AT2G29980.2
FAD3
fatty acid desaturase 3
Chr1_-_8559066 3.31 AT1G24170.1
LGT9
Nucleotide-diphospho-sugar transferases superfamily protein
Chr3_+_19639549 3.29 AT3G52960.1
AT3G52960
Thioredoxin superfamily protein
Chr4_+_17986384 3.28 AT4G38430.1
ROPGEF1
rho guanyl-nucleotide exchange factor 1
Chr2_-_12785190 3.27 AT2G29980.1
FAD3
fatty acid desaturase 3
Chr1_+_2047886 3.26 AT1G06680.2
PSBP-1
photosystem II subunit P-1
Chr2_+_15934244 3.26 AT2G38080.1
IRX12
Laccase/Diphenol oxidase family protein
Chr1_+_2047634 3.26 AT1G06680.1
PSBP-1
photosystem II subunit P-1
Chr3_+_2717557 3.25 AT3G08940.2
AT3G08940.1
LHCB4.2
light harvesting complex photosystem II
Chr1_+_27991165 3.25 AT1G74470.1
AT1G74470
Pyridine nucleotide-disulfide oxidoreductase family protein
Chr1_-_8235019 3.25 AT1G23205.1
AT1G23205
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_-_23417119 3.25 AT3G63410.1
APG1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr2_+_19469571 3.23 AT2G47440.2
AT2G47440.1
AT2G47440
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_5934033 3.22 AT3G17350.1
AT3G17350.2
AT3G17350
wall-associated receptor kinase carboxy-terminal protein
Chr4_+_5839599 3.20 AT4G09160.1
AT4G09160.2
AT4G09160.3
AT4G09160
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Chr4_+_11128941 3.20 AT4G20760.2
AT4G20760.1
AT4G20760
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_6278150 3.19 AT1G18250.2
AT1G18250.1
ATLP-1
Pathogenesis-related thaumatin superfamily protein
Chr5_+_7394443 3.19 AT5G22340.1
AT5G22340.2
AT5G22340
NF-kappa-B inhibitor-like protein
Chr3_+_19417372 3.18 AT3G52370.2
AT3G52370.1
FLA15
FASCICLIN-like arabinogalactan protein 15 precursor
Chr5_+_15421573 3.18 AT5G38520.2
AT5G38520
alpha/beta-Hydrolases superfamily protein
Chr3_+_6752422 3.17 AT3G19480.1
AT3G19480
D-3-phosphoglycerate dehydrogenase
Chr5_+_15421289 3.17 AT5G38520.1
AT5G38520
alpha/beta-Hydrolases superfamily protein
Chr4_-_9754161 3.16 AT4G17490.1
ERF6
ethylene responsive element binding factor 6
Chr3_+_22902491 3.16 AT3G61870.1
AT3G61870.2
AT3G61870
plant/protein
Chr3_-_1855063 3.16 AT3G06130.2
AT3G06130.1
AT3G06130
Heavy metal transport/detoxification superfamily protein
Chr3_-_9723904 3.15 AT3G26520.1
TIP2
tonoplast intrinsic protein 2
Chr1_+_2263037 3.14 AT1G07370.1
PCNA1
proliferating cellular nuclear antigen 1
Chr1_+_28078852 3.11 AT1G74730.1
AT1G74730
transmembrane protein, putative (DUF1118)
Chr3_-_19747114 3.11 AT3G53260.1
PAL2
phenylalanine ammonia-lyase 2
Chr4_+_14304921 3.10 AT4G29020.2
AT4G29020.1
AT4G29020
glycine-rich protein
Chr3_-_20806333 3.09 AT3G56060.1
AT3G56060
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr2_-_18914739 3.09 AT2G45970.1
CYP86A8
cytochrome P450, family 86, subfamily A, polypeptide 8
Chr4_-_13496738 3.09 AT4G26830.1
AT4G26830.2
AT4G26830
O-Glycosyl hydrolases family 17 protein
Chr2_+_17527167 3.09 AT2G41990.1
AT2G41990
late embryogenesis abundant protein
Chr3_-_22881775 3.07 AT3G61820.1
AT3G61820
Eukaryotic aspartyl protease family protein
Chr4_+_12376122 3.07 AT4G23750.1
AT4G23750.2
CRF2
cytokinin response factor 2
Chr5_+_5820969 3.06 AT5G17670.1
AT5G17670
alpha/beta-Hydrolases superfamily protein
Chr1_-_19101265 3.06 AT1G51500.1
ABCG12
ABC-2 type transporter family protein
Chr1_-_8940613 3.05 AT1G25450.1
KCS5
3-ketoacyl-CoA synthase 5
Chr2_+_11856571 3.05 AT2G27820.1
PD1
prephenate dehydratase 1
Chr4_-_947075 3.05 AT4G02130.2
AT4G02130.3
GATL6
galacturonosyltransferase 6
Chr5_-_3709403 3.03 AT5G11550.1
AT5G11550
ARM repeat superfamily protein
Chr1_+_18351324 3.00 AT1G49580.1
AT1G49580
Calcium-dependent protein kinase (CDPK) family protein
Chr3_+_20344785 3.00 AT3G54920.1
PMR6
Pectin lyase-like superfamily protein
Chr1_+_1191519 3.00 AT1G04420.1
AT1G04420
NAD(P)-linked oxidoreductase superfamily protein
Chr3_+_22745514 3.00 AT3G61470.1
LHCA2
photosystem I light harvesting complex protein
Chr1_+_5514262 3.00 AT1G16080.1
AT1G16080
nuclear protein
Chr3_+_1225919 3.00 AT3G04550.1
AT3G04550
rubisco accumulation factor-like protein
Chr2_+_16745628 2.99 AT2G40100.1
AT2G40100.2
LHCB4.3
light harvesting complex photosystem II
Chr3_+_16569051 2.99 AT3G45230.1
AT3G45230
hydroxyproline-rich glycoprotein family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT1G03800

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.2 6.5 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
2.0 6.0 GO:0015840 urea transport(GO:0015840)
1.9 36.4 GO:0006949 syncytium formation(GO:0006949)
1.9 5.7 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
1.4 1.4 GO:0009915 phloem sucrose loading(GO:0009915)
1.3 5.2 GO:0090308 regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
1.2 8.4 GO:0010623 programmed cell death involved in cell development(GO:0010623)
1.1 12.3 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
1.1 6.5 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
1.0 3.1 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
1.0 4.2 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
1.0 3.0 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
1.0 2.9 GO:0006434 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
1.0 5.8 GO:0009650 UV protection(GO:0009650)
1.0 2.9 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
1.0 3.9 GO:0000719 photoreactive repair(GO:0000719)
0.9 1.9 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.9 3.7 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.9 3.6 GO:0006065 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.9 8.0 GO:0009097 isoleucine metabolic process(GO:0006549) isoleucine biosynthetic process(GO:0009097)
0.9 4.4 GO:0042549 photosystem II stabilization(GO:0042549)
0.9 0.9 GO:0046717 acid secretion(GO:0046717)
0.8 8.4 GO:0010189 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.8 0.8 GO:0009803 cinnamic acid metabolic process(GO:0009803)
0.8 2.4 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.8 1.6 GO:0040019 positive regulation of embryonic development(GO:0040019)
0.8 3.9 GO:0009590 detection of gravity(GO:0009590)
0.8 7.8 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.8 6.2 GO:0006183 GTP biosynthetic process(GO:0006183)
0.8 3.9 GO:0050810 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.7 4.4 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.7 4.4 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.7 4.2 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.7 4.7 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.7 4.6 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.6 1.9 GO:1902975 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.6 3.9 GO:0006272 leading strand elongation(GO:0006272)
0.6 2.5 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.6 2.5 GO:0010480 microsporocyte differentiation(GO:0010480)
0.6 2.5 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.6 2.5 GO:0015729 oxaloacetate transport(GO:0015729)
0.6 7.4 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.6 3.1 GO:0010226 response to lithium ion(GO:0010226)
0.6 8.4 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.6 1.8 GO:0019594 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.6 3.6 GO:0051098 regulation of binding(GO:0051098)
0.6 1.8 GO:0080051 cutin transport(GO:0080051)
0.6 1.7 GO:0009660 amyloplast organization(GO:0009660)
0.6 1.7 GO:2000001 regulation of DNA damage checkpoint(GO:2000001)
0.6 2.8 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.6 2.8 GO:0010376 stomatal complex formation(GO:0010376)
0.5 1.6 GO:0030174 regulation of DNA-dependent DNA replication initiation(GO:0030174)
0.5 9.2 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.5 5.5 GO:0009098 leucine biosynthetic process(GO:0009098)
0.5 2.5 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.5 4.9 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.5 9.4 GO:0010207 photosystem II assembly(GO:0010207)
0.5 1.4 GO:0006666 3-keto-sphinganine metabolic process(GO:0006666)
0.5 4.2 GO:0033206 meiotic cytokinesis(GO:0033206)
0.5 1.9 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.5 1.9 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.5 1.9 GO:0090172 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.5 3.7 GO:0016045 detection of bacterium(GO:0016045)
0.5 2.3 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.5 1.8 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.4 6.7 GO:0006026 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.4 1.8 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.4 1.3 GO:0009143 nucleoside triphosphate catabolic process(GO:0009143)
0.4 4.7 GO:0010047 fruit dehiscence(GO:0010047)
0.4 2.1 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.4 8.1 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.4 1.3 GO:0034389 lipid particle organization(GO:0034389)
0.4 9.2 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.4 15.0 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.4 5.8 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.4 34.4 GO:0045490 pectin catabolic process(GO:0045490)
0.4 6.5 GO:0010315 auxin efflux(GO:0010315)
0.4 1.2 GO:0007349 cellularization(GO:0007349)
0.4 1.2 GO:1900151 regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.4 9.1 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.4 1.2 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.4 16.0 GO:0045489 pectin biosynthetic process(GO:0045489)
0.4 1.1 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.4 4.9 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.4 2.6 GO:0010067 procambium histogenesis(GO:0010067)
0.4 7.0 GO:0009959 negative gravitropism(GO:0009959)
0.4 1.4 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.4 0.7 GO:0009647 skotomorphogenesis(GO:0009647)
0.4 2.8 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.4 1.4 GO:0048462 carpel formation(GO:0048462)
0.4 2.8 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.3 4.2 GO:0032544 plastid translation(GO:0032544)
0.3 1.4 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.3 0.3 GO:0033559 unsaturated fatty acid metabolic process(GO:0033559)
0.3 1.3 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.3 10.6 GO:0080022 primary root development(GO:0080022)
0.3 2.3 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.3 1.0 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.3 11.6 GO:0042335 cuticle development(GO:0042335)
0.3 2.5 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.3 0.6 GO:0045828 positive regulation of isoprenoid metabolic process(GO:0045828)
0.3 1.5 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.3 1.5 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.3 3.6 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.3 0.9 GO:0034059 response to anoxia(GO:0034059)
0.3 2.0 GO:0034440 lipid oxidation(GO:0034440)
0.3 0.9 GO:0030638 polyketide metabolic process(GO:0030638)
0.3 1.7 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.3 1.9 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.3 17.2 GO:0007267 cell-cell signaling(GO:0007267)
0.3 2.8 GO:0009957 epidermal cell fate specification(GO:0009957)
0.3 1.9 GO:0015909 long-chain fatty acid transport(GO:0015909)
0.3 1.3 GO:0018206 peptidyl-methionine modification(GO:0018206)
0.3 0.8 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.3 0.8 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.3 11.1 GO:0048825 cotyledon development(GO:0048825)
0.3 2.4 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.3 14.0 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.3 3.1 GO:0080086 stamen filament development(GO:0080086)
0.3 0.5 GO:0048533 sporocyte differentiation(GO:0048533)
0.2 1.7 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.2 1.7 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.2 2.9 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.2 2.9 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.2 3.1 GO:0009231 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.2 1.2 GO:0019419 sulfate reduction(GO:0019419)
0.2 5.6 GO:0010020 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.2 3.7 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.2 1.4 GO:0006013 mannose metabolic process(GO:0006013)
0.2 4.6 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.2 1.1 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.2 1.1 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.2 0.4 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 0.8 GO:0001887 selenium compound metabolic process(GO:0001887)
0.2 2.9 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.2 1.2 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.2 0.6 GO:0097298 regulation of nucleus size(GO:0097298)
0.2 2.6 GO:0042793 transcription from plastid promoter(GO:0042793)
0.2 0.8 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.2 0.4 GO:0010959 regulation of metal ion transport(GO:0010959)
0.2 3.1 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
0.2 1.2 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.2 3.9 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.2 14.7 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.2 1.1 GO:0071731 response to nitric oxide(GO:0071731)
0.2 3.6 GO:0010152 pollen maturation(GO:0010152)
0.2 1.7 GO:0009799 specification of symmetry(GO:0009799)
0.2 1.5 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.2 6.0 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.2 1.1 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.2 1.6 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.2 0.5 GO:0031054 pre-miRNA processing(GO:0031054)
0.2 5.6 GO:0043622 cortical microtubule organization(GO:0043622)
0.2 1.5 GO:0010161 red light signaling pathway(GO:0010161) cellular response to red light(GO:0071491)
0.2 0.5 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.2 3.4 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.2 1.7 GO:0048598 embryonic morphogenesis(GO:0048598)
0.2 0.2 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.2 3.4 GO:0010166 wax metabolic process(GO:0010166)
0.2 1.1 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 1.0 GO:0010496 intercellular transport(GO:0010496)
0.1 0.6 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.1 4.0 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.1 3.4 GO:0009638 phototropism(GO:0009638)
0.1 0.4 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 3.7 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.1 5.5 GO:0019762 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.1 0.5 GO:0032352 positive regulation of auxin biosynthetic process(GO:0010601) positive regulation of hormone metabolic process(GO:0032352) positive regulation of hormone biosynthetic process(GO:0046886) positive regulation of auxin metabolic process(GO:0090355)
0.1 7.4 GO:0015979 photosynthesis(GO:0015979)
0.1 0.7 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 3.2 GO:0010027 thylakoid membrane organization(GO:0010027)
0.1 0.4 GO:0043132 NAD transport(GO:0043132)
0.1 1.7 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.1 1.1 GO:0051553 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.1 1.9 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.1 2.4 GO:0006863 purine nucleobase transport(GO:0006863)
0.1 0.7 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 1.0 GO:0031110 regulation of microtubule polymerization or depolymerization(GO:0031110)
0.1 0.7 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.1 1.1 GO:0009435 NAD biosynthetic process(GO:0009435)
0.1 3.7 GO:0070417 cellular response to cold(GO:0070417)
0.1 1.3 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.1 3.9 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596) protein localization to chloroplast(GO:0072598)
0.1 3.6 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.1 0.4 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.1 2.0 GO:0046855 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.1 0.9 GO:0043486 histone exchange(GO:0043486)
0.1 1.4 GO:0070475 rRNA base methylation(GO:0070475)
0.1 2.3 GO:0009206 purine nucleoside triphosphate biosynthetic process(GO:0009145) purine ribonucleoside triphosphate biosynthetic process(GO:0009206)
0.1 0.6 GO:0048830 adventitious root development(GO:0048830)
0.1 0.8 GO:0031222 arabinan catabolic process(GO:0031222)
0.1 1.4 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.1 1.8 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.1 12.4 GO:0007623 circadian rhythm(GO:0007623) rhythmic process(GO:0048511)
0.1 1.0 GO:0048859 formation of organ boundary(GO:0010160) organ boundary specification between lateral organs and the meristem(GO:0010199) formation of anatomical boundary(GO:0048859)
0.1 3.0 GO:0051225 spindle assembly(GO:0051225)
0.1 0.6 GO:0070982 L-asparagine biosynthetic process(GO:0070981) L-asparagine metabolic process(GO:0070982)
0.1 0.4 GO:1903321 negative regulation of protein modification by small protein conjugation or removal(GO:1903321)
0.1 1.3 GO:0019471 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.1 0.9 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.1 2.3 GO:0010584 pollen exine formation(GO:0010584)
0.1 2.9 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 0.4 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.1 0.8 GO:0048766 root hair initiation(GO:0048766)
0.1 1.3 GO:0009142 nucleoside triphosphate biosynthetic process(GO:0009142)
0.1 1.9 GO:0006743 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.1 6.0 GO:0009664 plant-type cell wall organization(GO:0009664)
0.1 0.6 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.1 2.8 GO:0000741 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.1 0.9 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.8 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.1 0.2 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 2.4 GO:0006284 base-excision repair(GO:0006284)
0.1 1.7 GO:0006817 phosphate ion transport(GO:0006817)
0.1 1.6 GO:0007140 male meiosis(GO:0007140)
0.1 0.5 GO:0043467 regulation of generation of precursor metabolites and energy(GO:0043467)
0.1 3.4 GO:0016485 protein processing(GO:0016485)
0.1 0.4 GO:0009819 drought recovery(GO:0009819)
0.1 0.2 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.1 4.3 GO:0009629 response to gravity(GO:0009629)
0.1 0.9 GO:2000027 regulation of leaf morphogenesis(GO:1901371) regulation of organ morphogenesis(GO:2000027)
0.1 0.5 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.1 0.6 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.1 1.1 GO:0046688 response to copper ion(GO:0046688)
0.1 0.9 GO:0030865 cortical cytoskeleton organization(GO:0030865)
0.1 0.5 GO:0032456 endocytic recycling(GO:0032456)
0.1 0.3 GO:0000012 single strand break repair(GO:0000012)
0.1 0.8 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.1 0.3 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.1 0.3 GO:0042989 sequestering of actin monomers(GO:0042989)
0.1 0.6 GO:0016926 protein desumoylation(GO:0016926)
0.1 1.0 GO:0000105 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 0.7 GO:0006415 translational termination(GO:0006415)
0.1 1.0 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 0.1 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.1 2.5 GO:0006414 translational elongation(GO:0006414)
0.1 3.3 GO:0002181 cytoplasmic translation(GO:0002181)
0.1 1.5 GO:0019750 chloroplast relocation(GO:0009902) chloroplast localization(GO:0019750) plastid localization(GO:0051644) establishment of plastid localization(GO:0051667)
0.1 1.7 GO:0010582 floral meristem determinacy(GO:0010582)
0.1 0.2 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.1 0.2 GO:0042908 xenobiotic transport(GO:0042908)
0.1 0.5 GO:0006670 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.1 0.9 GO:0065001 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 0.1 GO:0048451 petal formation(GO:0048451)
0.1 1.3 GO:0008356 asymmetric cell division(GO:0008356)
0.1 0.8 GO:0015770 disaccharide transport(GO:0015766) sucrose transport(GO:0015770)
0.1 0.9 GO:0006108 malate metabolic process(GO:0006108)
0.1 0.2 GO:0032412 regulation of anion channel activity(GO:0010359) regulation of transmembrane transporter activity(GO:0022898) regulation of ion transmembrane transporter activity(GO:0032412) regulation of anion transmembrane transport(GO:1903959)
0.1 0.8 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.1 0.1 GO:0055122 response to very low light intensity stimulus(GO:0055122)
0.1 0.2 GO:0071452 cellular response to singlet oxygen(GO:0071452)
0.1 1.0 GO:0032543 mitochondrial translation(GO:0032543)
0.1 2.4 GO:0009853 photorespiration(GO:0009853)
0.0 0.3 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.4 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.0 0.9 GO:0010051 xylem and phloem pattern formation(GO:0010051)
0.0 0.7 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.0 0.1 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.0 0.3 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.0 0.5 GO:0010098 suspensor development(GO:0010098)
0.0 0.7 GO:0035304 regulation of protein dephosphorylation(GO:0035304)
0.0 0.7 GO:0050821 protein stabilization(GO:0050821)
0.0 0.2 GO:0042276 error-prone translesion synthesis(GO:0042276)
0.0 1.1 GO:0006505 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.8 GO:0034394 protein localization to cell surface(GO:0034394) regulation of protein localization to cell surface(GO:2000008)
0.0 0.5 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.4 GO:0045861 negative regulation of proteolysis(GO:0045861)
0.0 0.7 GO:0046219 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.0 1.0 GO:0009637 response to blue light(GO:0009637)
0.0 0.6 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.3 GO:0009684 indoleacetic acid biosynthetic process(GO:0009684)
0.0 0.9 GO:0099515 vesicle transport along actin filament(GO:0030050) actin filament-based transport(GO:0099515) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.6 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 5.1 GO:0006631 fatty acid metabolic process(GO:0006631)
0.0 0.2 GO:0031333 negative regulation of protein complex assembly(GO:0031333)
0.0 1.0 GO:0051084 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.0 0.3 GO:0001709 cell fate determination(GO:0001709)
0.0 0.4 GO:0007093 mitotic cell cycle checkpoint(GO:0007093)
0.0 0.2 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.0 0.2 GO:0042126 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.0 0.1 GO:0006430 lysyl-tRNA aminoacylation(GO:0006430)
0.0 0.4 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 0.2 GO:0009082 branched-chain amino acid biosynthetic process(GO:0009082)
0.0 0.1 GO:0030308 negative regulation of cell growth(GO:0030308)
0.0 0.7 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.4 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.1 GO:0015800 acidic amino acid transport(GO:0015800)
0.0 0.2 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0 0.7 GO:0007131 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.0 0.3 GO:0006298 mismatch repair(GO:0006298)
0.0 0.1 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.2 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.1 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.1 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 0.1 GO:0042026 protein refolding(GO:0042026)
0.0 0.3 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.3 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.1 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.0 4.4 GO:0006412 translation(GO:0006412)
0.0 0.1 GO:0007292 female gamete generation(GO:0007292)
0.0 0.2 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.7 1.7 GO:0016328 lateral plasma membrane(GO:0016328)
1.6 12.9 GO:0009538 photosystem I reaction center(GO:0009538)
1.4 12.3 GO:0030076 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
1.1 7.8 GO:0000311 plastid large ribosomal subunit(GO:0000311)
1.0 3.1 GO:0043668 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
1.0 1.0 GO:0031357 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.9 10.1 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.8 4.2 GO:0009897 external side of plasma membrane(GO:0009897)
0.8 37.4 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.8 31.7 GO:0010319 stromule(GO:0010319)
0.6 1.9 GO:0016323 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.6 5.8 GO:0010369 chromocenter(GO:0010369)
0.6 3.0 GO:0009522 photosystem I(GO:0009522)
0.5 2.0 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.4 2.5 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.4 5.6 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.4 7.6 GO:0009508 plastid chromosome(GO:0009508)
0.4 2.5 GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o)(GO:0045263)
0.4 1.1 GO:1990298 bub1-bub3 complex(GO:1990298)
0.3 1.7 GO:0005960 glycine cleavage complex(GO:0005960)
0.3 4.5 GO:0005880 nuclear microtubule(GO:0005880)
0.3 114.7 GO:0009579 thylakoid(GO:0009579)
0.3 4.0 GO:0042644 chloroplast nucleoid(GO:0042644)
0.3 2.9 GO:0042555 MCM complex(GO:0042555)
0.3 1.4 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.3 2.5 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.3 0.6 GO:0009501 amyloplast(GO:0009501)
0.3 4.6 GO:0009531 secondary cell wall(GO:0009531)
0.3 41.9 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.3 1.9 GO:0000798 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.2 5.4 GO:0016324 apical plasma membrane(GO:0016324)
0.2 0.9 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.2 1.5 GO:0005884 actin filament(GO:0005884)
0.2 1.2 GO:0030139 endocytic vesicle(GO:0030139)
0.2 0.9 GO:0000812 Swr1 complex(GO:0000812)
0.2 29.8 GO:0009505 plant-type cell wall(GO:0009505)
0.2 0.7 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 59.0 GO:0009570 chloroplast stroma(GO:0009570)
0.1 1.1 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 1.9 GO:0055028 cortical microtubule(GO:0055028)
0.1 0.6 GO:0030863 cortical cytoskeleton(GO:0030863)
0.1 3.7 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 0.9 GO:0009986 cell surface(GO:0009986)
0.1 7.7 GO:0099512 microtubule(GO:0005874) supramolecular fiber(GO:0099512) polymeric cytoskeletal fiber(GO:0099513)
0.1 0.4 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.1 4.4 GO:0009707 chloroplast outer membrane(GO:0009707)
0.1 0.2 GO:0005775 vacuolar lumen(GO:0005775)
0.1 22.4 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.1 0.5 GO:0000796 condensin complex(GO:0000796)
0.1 1.5 GO:0000315 organellar large ribosomal subunit(GO:0000315)
0.1 2.5 GO:0009504 cell plate(GO:0009504)
0.1 0.5 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.1 7.8 GO:0015934 large ribosomal subunit(GO:0015934)
0.1 0.5 GO:0035619 root hair(GO:0035618) root hair tip(GO:0035619)
0.1 0.4 GO:0031969 chloroplast membrane(GO:0031969)
0.1 2.2 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.1 0.9 GO:0016459 myosin complex(GO:0016459)
0.1 0.3 GO:0005687 U4 snRNP(GO:0005687)
0.0 93.1 GO:0005576 extracellular region(GO:0005576)
0.0 0.6 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 1.7 GO:0032040 small-subunit processome(GO:0032040)
0.0 1.6 GO:0090406 pollen tube(GO:0090406)
0.0 0.3 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.6 GO:0000178 exosome (RNase complex)(GO:0000178)
0.0 1.5 GO:0016607 nuclear speck(GO:0016607)
0.0 0.4 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.0 2.2 GO:0022626 cytosolic ribosome(GO:0022626)
0.0 0.7 GO:0031903 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 0.5 GO:0099503 secretory vesicle(GO:0099503)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
4.1 12.3 GO:0051738 xanthophyll binding(GO:0051738)
2.7 10.8 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
2.4 7.2 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
1.9 5.7 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
1.7 8.4 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
1.6 6.5 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
1.6 7.8 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
1.5 4.6 GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
1.1 4.4 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
1.0 7.9 GO:0019137 thioglucosidase activity(GO:0019137)
1.0 2.9 GO:0004828 serine-tRNA ligase activity(GO:0004828)
1.0 3.8 GO:0003862 3-isopropylmalate dehydrogenase activity(GO:0003862)
0.9 3.7 GO:0015245 fatty acid transporter activity(GO:0015245)
0.8 8.4 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.8 2.5 GO:0010242 oxygen evolving activity(GO:0010242)
0.8 7.6 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.8 2.5 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.8 3.3 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.8 4.1 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.8 24.0 GO:0008266 poly(U) RNA binding(GO:0008266)
0.8 3.9 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.8 2.3 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.7 3.6 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.7 4.4 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.7 2.9 GO:0019156 isoamylase activity(GO:0019156)
0.7 13.8 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.7 4.0 GO:0045431 flavonol synthase activity(GO:0045431)
0.7 2.0 GO:0016842 amidine-lyase activity(GO:0016842)
0.7 3.3 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.7 1.3 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.6 3.9 GO:0003913 DNA photolyase activity(GO:0003913)
0.6 15.7 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.6 5.6 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.6 11.7 GO:0005199 structural constituent of cell wall(GO:0005199)
0.6 8.6 GO:0004312 fatty acid synthase activity(GO:0004312)
0.6 1.7 GO:0016642 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.6 7.3 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.6 2.2 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.6 16.0 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.5 1.1 GO:0016841 ammonia-lyase activity(GO:0016841)
0.5 2.7 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.5 4.3 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.5 1.6 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.5 2.5 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.5 3.0 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.5 2.0 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.5 2.0 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.5 3.9 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.5 1.4 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.5 1.4 GO:0047560 3-dehydrosphinganine reductase activity(GO:0047560)
0.5 1.9 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.4 5.8 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.4 1.3 GO:0035671 enone reductase activity(GO:0035671)
0.4 2.6 GO:0051723 protein methylesterase activity(GO:0051723)
0.4 2.1 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
0.4 2.5 GO:0016531 copper chaperone activity(GO:0016531)
0.4 1.3 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.4 1.2 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.4 3.5 GO:0043495 protein anchor(GO:0043495)
0.4 1.2 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.4 1.1 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.4 3.0 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.4 8.5 GO:0016168 chlorophyll binding(GO:0016168)
0.4 1.1 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.4 6.5 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.4 1.1 GO:0000309 nicotinamide-nucleotide adenylyltransferase activity(GO:0000309)
0.4 1.1 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.4 1.4 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.3 3.0 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.3 7.2 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.3 11.0 GO:0005179 hormone activity(GO:0005179)
0.3 1.3 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.3 2.5 GO:0005350 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.3 18.4 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.3 20.4 GO:0004650 polygalacturonase activity(GO:0004650)
0.3 1.5 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.3 0.9 GO:0008131 primary amine oxidase activity(GO:0008131)
0.3 1.2 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.3 2.2 GO:0010011 auxin binding(GO:0010011)
0.3 17.5 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.3 2.1 GO:0004003 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.3 0.8 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.3 3.4 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.3 3.8 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.2 1.7 GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity(GO:0008441)
0.2 1.0 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.2 0.7 GO:0035591 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.2 1.9 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.2 0.9 GO:0052743 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.2 2.2 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.2 1.1 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.2 1.1 GO:0034511 U3 snoRNA binding(GO:0034511)
0.2 3.1 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.2 1.1 GO:0010313 phytochrome binding(GO:0010313)
0.2 2.3 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.2 0.8 GO:0004174 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.2 4.1 GO:0035250 UDP-galactosyltransferase activity(GO:0035250)
0.2 5.6 GO:0008810 cellulase activity(GO:0008810)
0.2 1.6 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.2 0.8 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.2 2.2 GO:0016161 beta-amylase activity(GO:0016161)
0.2 7.1 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.2 1.3 GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water(GO:0016717)
0.2 7.8 GO:0045735 nutrient reservoir activity(GO:0045735)
0.2 0.6 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.2 2.6 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.2 2.0 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.2 1.1 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.2 0.4 GO:0052658 inositol-1,4,5-trisphosphate 5-phosphatase activity(GO:0052658)
0.2 2.2 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.2 2.2 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.2 1.9 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.2 0.9 GO:0004765 shikimate kinase activity(GO:0004765)
0.2 1.4 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.2 0.5 GO:0008481 sphinganine kinase activity(GO:0008481)
0.2 1.5 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.2 3.3 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.2 2.9 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.2 0.8 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.2 1.1 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.2 1.8 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.2 0.5 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.2 16.7 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 1.3 GO:0048256 flap endonuclease activity(GO:0048256)
0.1 0.4 GO:0016882 cyclo-ligase activity(GO:0016882)
0.1 0.7 GO:0004049 anthranilate synthase activity(GO:0004049)
0.1 1.9 GO:0004124 cysteine synthase activity(GO:0004124)
0.1 1.5 GO:0008378 galactosyltransferase activity(GO:0008378)
0.1 0.6 GO:0070139 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific endopeptidase activity(GO:0070139) SUMO-specific isopeptidase activity(GO:0070140)
0.1 1.0 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.1 1.7 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.1 22.0 GO:0005507 copper ion binding(GO:0005507)
0.1 1.4 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.1 5.6 GO:0008171 O-methyltransferase activity(GO:0008171)
0.1 0.3 GO:0017077 oxidative phosphorylation uncoupler activity(GO:0017077)
0.1 1.8 GO:0016872 intramolecular lyase activity(GO:0016872)
0.1 0.7 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 1.1 GO:0046923 ER retention sequence binding(GO:0046923)
0.1 12.2 GO:0004857 enzyme inhibitor activity(GO:0004857)
0.1 0.6 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.1 0.7 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.7 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 1.7 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.1 1.3 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 1.4 GO:0003727 single-stranded RNA binding(GO:0003727)
0.1 13.7 GO:0008017 microtubule binding(GO:0008017)
0.1 1.1 GO:0002020 protease binding(GO:0002020)
0.1 0.3 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726) oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 1.3 GO:0019798 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.1 0.4 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 0.7 GO:0004340 glucokinase activity(GO:0004340)
0.1 0.5 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 3.2 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.1 3.4 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 1.2 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.1 3.6 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 0.6 GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity(GO:0004066)
0.1 0.3 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.1 0.3 GO:0043891 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.1 1.7 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.1 4.7 GO:0004180 carboxypeptidase activity(GO:0004180)
0.1 0.3 GO:0035241 protein-arginine omega-N monomethyltransferase activity(GO:0035241)
0.1 0.2 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.1 0.4 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.6 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.1 0.3 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.1 0.3 GO:0003785 actin monomer binding(GO:0003785)
0.1 0.3 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 0.8 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 0.8 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.1 0.9 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 1.2 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.1 4.0 GO:0016410 N-acyltransferase activity(GO:0016410)
0.1 0.6 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 0.2 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.1 0.7 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 2.7 GO:0003713 transcription coactivator activity(GO:0003713)
0.1 0.5 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 9.3 GO:0043531 ADP binding(GO:0043531)
0.1 0.8 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)
0.0 0.3 GO:0019825 oxygen binding(GO:0019825)
0.0 0.5 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.7 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.3 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 0.2 GO:0036456 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.0 0.9 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.0 0.8 GO:0070628 proteasome binding(GO:0070628)
0.0 0.3 GO:0008494 translation activator activity(GO:0008494) mitochondrial ribosome binding(GO:0097177)
0.0 0.2 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 2.1 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 1.3 GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor(GO:0016671)
0.0 0.2 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.0 0.9 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 5.1 GO:0008757 S-adenosylmethionine-dependent methyltransferase activity(GO:0008757)
0.0 0.9 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.8 GO:0031490 chromatin DNA binding(GO:0031490)
0.0 1.7 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 8.3 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.3 GO:0010294 abscisic acid glucosyltransferase activity(GO:0010294)
0.0 0.6 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.0 0.9 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.6 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.1 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.0 0.2 GO:0004129 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 0.1 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.0 1.0 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.3 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.0 0.2 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.4 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 0.3 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.0 0.1 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.0 0.1 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.0 2.2 GO:0004386 helicase activity(GO:0004386)
0.0 0.1 GO:0004824 lysine-tRNA ligase activity(GO:0004824)
0.0 0.1 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.0 0.2 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.0 1.1 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.3 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 2.4 GO:0016614 oxidoreductase activity, acting on CH-OH group of donors(GO:0016614)
0.0 0.4 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.0 0.9 GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor(GO:0016620)
0.0 0.5 GO:0051087 chaperone binding(GO:0051087)
0.0 11.7 GO:0003729 mRNA binding(GO:0003729) poly(A) RNA binding(GO:0044822)
0.0 0.2 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084)
0.0 0.7 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.3 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.1 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.0 0.0 GO:0052736 beta-glucanase activity(GO:0052736)
0.0 0.1 GO:0004142 diacylglycerol cholinephosphotransferase activity(GO:0004142)
0.0 0.5 GO:0008408 3'-5' exonuclease activity(GO:0008408)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 5.3 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.6 2.4 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.5 3.2 PID AP1 PATHWAY AP-1 transcription factor network
0.5 1.9 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.3 1.9 PID CMYB PATHWAY C-MYB transcription factor network
0.3 2.3 PID E2F PATHWAY E2F transcription factor network
0.2 0.5 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.1 0.5 PID S1P S1P1 PATHWAY S1P1 pathway
0.0 0.4 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 2.8 REACTOME TRANSCRIPTIONAL ACTIVITY OF SMAD2 SMAD3 SMAD4 HETEROTRIMER Genes involved in Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer
0.7 3.3 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.6 1.9 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.6 4.1 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.4 1.3 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.4 1.9 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.4 1.8 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.3 7.4 REACTOME PEPTIDE CHAIN ELONGATION Genes involved in Peptide chain elongation
0.2 3.8 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.2 1.4 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.2 1.7 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.2 0.5 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.1 0.4 REACTOME G1 PHASE Genes involved in G1 Phase
0.1 1.3 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.1 0.2 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.0 0.1 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.0 0.3 REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS Genes involved in Homologous recombination repair of replication-independent double-strand breaks
0.0 0.3 REACTOME TCA CYCLE AND RESPIRATORY ELECTRON TRANSPORT Genes involved in The citric acid (TCA) cycle and respiratory electron transport