A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
WRNIP1 | hg19_v2_chr6_+_2765595_2765797 | 0.90 | 1.4e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_56813305 Show fit | 1.74 |
ENST00000593151.1
|
Uncharacterized protein |
|
chr19_-_51875894 Show fit | 1.23 |
ENST00000600427.1
ENST00000595217.1 ENST00000221978.5 |
natural killer cell group 7 sequence |
|
chr17_-_42994283 Show fit | 1.23 |
ENST00000593179.1
|
glial fibrillary acidic protein |
|
chr2_+_20866424 Show fit | 1.11 |
ENST00000272224.3
|
growth differentiation factor 7 |
|
chr19_-_56109119 Show fit | 1.10 |
ENST00000587678.1
|
FLT3-interacting zinc finger 1 |
|
chr12_-_58145889 Show fit | 1.09 |
ENST00000547853.1
|
cyclin-dependent kinase 4 |
|
chr16_+_77246337 Show fit | 1.09 |
ENST00000563157.1
|
synaptonemal complex central element protein 1-like |
|
chr2_-_121624973 Show fit | 1.06 |
ENST00000603720.1
|
RP11-297J22.1 |
|
chr16_+_30709530 Show fit | 1.01 |
ENST00000411466.2
|
Snf2-related CREBBP activator protein |
|
chr16_+_57769635 Show fit | 1.01 |
ENST00000379661.3
ENST00000562592.1 ENST00000566726.1 |
katanin p80 (WD repeat containing) subunit B 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.0 | GO:0010867 | positive regulation of triglyceride biosynthetic process(GO:0010867) |
0.2 | 2.6 | GO:0030259 | lipid glycosylation(GO:0030259) |
0.2 | 2.6 | GO:0030388 | fructose 1,6-bisphosphate metabolic process(GO:0030388) |
0.1 | 2.6 | GO:0031915 | positive regulation of synaptic plasticity(GO:0031915) |
0.1 | 2.6 | GO:0006744 | ubiquinone biosynthetic process(GO:0006744) quinone biosynthetic process(GO:1901663) |
0.1 | 2.6 | GO:0097503 | sialylation(GO:0097503) |
0.1 | 2.4 | GO:1902857 | positive regulation of nonmotile primary cilium assembly(GO:1902857) |
0.4 | 2.2 | GO:0015878 | biotin transport(GO:0015878) pantothenate transmembrane transport(GO:0015887) |
0.4 | 2.2 | GO:0003404 | optic vesicle morphogenesis(GO:0003404) |
0.1 | 2.2 | GO:0046341 | CDP-diacylglycerol metabolic process(GO:0046341) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.7 | GO:0030055 | cell-substrate junction(GO:0030055) |
0.1 | 6.5 | GO:0097517 | stress fiber(GO:0001725) contractile actin filament bundle(GO:0097517) |
0.0 | 5.1 | GO:0043202 | lysosomal lumen(GO:0043202) |
0.0 | 3.5 | GO:0101002 | ficolin-1-rich granule(GO:0101002) ficolin-1-rich granule lumen(GO:1904813) |
0.0 | 3.4 | GO:0044853 | plasma membrane raft(GO:0044853) |
0.1 | 3.3 | GO:0043034 | costamere(GO:0043034) |
0.0 | 2.9 | GO:0002102 | podosome(GO:0002102) |
0.3 | 2.8 | GO:0070033 | synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex(GO:0070033) |
0.0 | 2.8 | GO:0032587 | ruffle membrane(GO:0032587) |
0.0 | 2.7 | GO:0032580 | Golgi cisterna membrane(GO:0032580) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.6 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.0 | 5.0 | GO:0017137 | Rab GTPase binding(GO:0017137) |
0.0 | 4.2 | GO:0005178 | integrin binding(GO:0005178) |
0.0 | 4.0 | GO:0005089 | Rho guanyl-nucleotide exchange factor activity(GO:0005089) |
0.1 | 3.7 | GO:0017075 | syntaxin-1 binding(GO:0017075) |
0.1 | 3.4 | GO:0017166 | vinculin binding(GO:0017166) |
0.1 | 3.2 | GO:0070064 | proline-rich region binding(GO:0070064) |
0.0 | 2.8 | GO:0042162 | telomeric DNA binding(GO:0042162) |
0.1 | 2.6 | GO:0030676 | Rac guanyl-nucleotide exchange factor activity(GO:0030676) |
0.2 | 2.5 | GO:0019826 | oxygen sensor activity(GO:0019826) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.1 | PID HDAC CLASSI PATHWAY | Signaling events mediated by HDAC Class I |
0.1 | 5.8 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.0 | 4.7 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 4.7 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.2 | 4.6 | SA G1 AND S PHASES | Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition. |
0.0 | 4.5 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 4.3 | PID TAP63 PATHWAY | Validated transcriptional targets of TAp63 isoforms |
0.1 | 3.5 | ST GAQ PATHWAY | G alpha q Pathway |
0.0 | 2.8 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 2.8 | PID RHOA PATHWAY | RhoA signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.9 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |
0.1 | 7.8 | REACTOME GLUCONEOGENESIS | Genes involved in Gluconeogenesis |
0.0 | 5.7 | REACTOME SIGNALING BY PDGF | Genes involved in Signaling by PDGF |
0.0 | 4.2 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |
0.0 | 4.0 | REACTOME G ALPHA1213 SIGNALLING EVENTS | Genes involved in G alpha (12/13) signalling events |
0.0 | 3.7 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.0 | 3.5 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.1 | 3.4 | REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE | Genes involved in Sema4D induced cell migration and growth-cone collapse |
0.1 | 3.1 | REACTOME INHIBITION OF INSULIN SECRETION BY ADRENALINE NORADRENALINE | Genes involved in Inhibition of Insulin Secretion by Adrenaline/Noradrenaline |
0.1 | 3.1 | REACTOME GLYCOSPHINGOLIPID METABOLISM | Genes involved in Glycosphingolipid metabolism |