A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
REST
|
ENSG00000084093.11 | REST |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
REST | hg19_v2_chr4_+_57774042_57774114 | -0.92 | 8.9e-03 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_+_93389425 | 0.46 |
ENST00000216492.5 ENST00000334654.4 |
CHGA |
chromogranin A (parathyroid secretory protein 1) |
chr10_+_99609996 | 0.38 |
ENST00000370602.1 |
GOLGA7B |
golgin A7 family, member B |
chr2_-_27531313 | 0.37 |
ENST00000296099.2 |
UCN |
urocortin |
chr22_+_31199037 | 0.35 |
ENST00000424224.1 |
OSBP2 |
oxysterol binding protein 2 |
chrX_-_49056635 | 0.31 |
ENST00000472598.1 ENST00000538567.1 ENST00000479808.1 ENST00000263233.4 |
SYP |
synaptophysin |
chr15_-_32162833 | 0.28 |
ENST00000560598.1 |
OTUD7A |
OTU domain containing 7A |
chr3_+_193853927 | 0.27 |
ENST00000232424.3 |
HES1 |
hes family bHLH transcription factor 1 |
chr16_+_3019309 | 0.23 |
ENST00000576565.1 |
PAQR4 |
progestin and adipoQ receptor family member IV |
chr7_+_150748288 | 0.20 |
ENST00000490540.1 |
ASIC3 |
acid-sensing (proton-gated) ion channel 3 |
chr11_-_75141206 | 0.20 |
ENST00000376292.4 |
KLHL35 |
kelch-like family member 35 |
chrX_-_153141302 | 0.19 |
ENST00000361699.4 ENST00000543994.1 ENST00000370057.3 ENST00000538883.1 ENST00000361981.3 |
L1CAM |
L1 cell adhesion molecule |
chr19_-_11639910 | 0.18 |
ENST00000588998.1 ENST00000586149.1 |
ECSIT |
ECSIT signalling integrator |
chr16_+_3019246 | 0.18 |
ENST00000318782.8 ENST00000293978.8 |
PAQR4 |
progestin and adipoQ receptor family member IV |
chr11_-_72492878 | 0.18 |
ENST00000535054.1 ENST00000545082.1 |
STARD10 |
StAR-related lipid transfer (START) domain containing 10 |
chr12_-_24737089 | 0.17 |
ENST00000483544.1 |
LINC00477 |
long intergenic non-protein coding RNA 477 |
chr3_-_48700310 | 0.16 |
ENST00000164024.4 ENST00000544264.1 |
CELSR3 |
cadherin, EGF LAG seven-pass G-type receptor 3 |
chr17_+_72667239 | 0.16 |
ENST00000402449.4 |
RAB37 |
RAB37, member RAS oncogene family |
chr20_-_62284766 | 0.15 |
ENST00000370053.1 |
STMN3 |
stathmin-like 3 |
chrX_+_153238220 | 0.15 |
ENST00000425274.1 |
TMEM187 |
transmembrane protein 187 |
chr11_+_64808675 | 0.14 |
ENST00000529996.1 |
SAC3D1 |
SAC3 domain containing 1 |
chr19_-_11639931 | 0.14 |
ENST00000592312.1 ENST00000590480.1 ENST00000585318.1 ENST00000252440.7 ENST00000417981.2 ENST00000270517.7 |
ECSIT |
ECSIT signalling integrator |
chr17_+_30813576 | 0.14 |
ENST00000313401.3 |
CDK5R1 |
cyclin-dependent kinase 5, regulatory subunit 1 (p35) |
chr19_-_3971050 | 0.14 |
ENST00000545797.2 ENST00000596311.1 |
DAPK3 |
death-associated protein kinase 3 |
chr19_+_39759154 | 0.13 |
ENST00000331982.5 |
IFNL2 |
interferon, lambda 2 |
chr7_-_65113280 | 0.13 |
ENST00000593865.1 |
AC104057.1 |
Protein LOC100996407 |
chr10_+_102790980 | 0.12 |
ENST00000393459.1 ENST00000224807.5 |
SFXN3 |
sideroflexin 3 |
chrX_-_153141434 | 0.12 |
ENST00000407935.2 ENST00000439496.1 |
L1CAM |
L1 cell adhesion molecule |
chrX_-_153237258 | 0.12 |
ENST00000310441.7 |
HCFC1 |
host cell factor C1 (VP16-accessory protein) |
chr12_+_52695617 | 0.12 |
ENST00000293525.5 |
KRT86 |
keratin 86 |
chr16_+_335680 | 0.11 |
ENST00000435833.1 |
PDIA2 |
protein disulfide isomerase family A, member 2 |
chr5_+_175298487 | 0.11 |
ENST00000393745.3 |
CPLX2 |
complexin 2 |
chr8_-_145752390 | 0.11 |
ENST00000529415.2 ENST00000533758.1 |
LRRC24 |
leucine rich repeat containing 24 |
chr19_-_45927622 | 0.10 |
ENST00000300853.3 ENST00000589165.1 |
ERCC1 |
excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) |
chr14_-_51562037 | 0.10 |
ENST00000338969.5 |
TRIM9 |
tripartite motif containing 9 |
chr5_+_175298674 | 0.10 |
ENST00000514150.1 |
CPLX2 |
complexin 2 |
chr19_+_9203855 | 0.10 |
ENST00000429566.3 |
OR1M1 |
olfactory receptor, family 1, subfamily M, member 1 |
chr20_+_36012051 | 0.10 |
ENST00000373567.2 |
SRC |
v-src avian sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog |
chr5_-_176037105 | 0.10 |
ENST00000303991.4 |
GPRIN1 |
G protein regulated inducer of neurite outgrowth 1 |
chr1_+_171750776 | 0.09 |
ENST00000458517.1 ENST00000362019.3 ENST00000367737.5 ENST00000361735.3 |
METTL13 |
methyltransferase like 13 |
chr15_+_75287861 | 0.09 |
ENST00000425597.3 ENST00000562327.1 ENST00000568018.1 ENST00000562212.1 ENST00000567920.1 ENST00000566872.1 ENST00000361900.6 ENST00000545456.1 |
SCAMP5 |
secretory carrier membrane protein 5 |
chr11_+_45907177 | 0.09 |
ENST00000241014.2 |
MAPK8IP1 |
mitogen-activated protein kinase 8 interacting protein 1 |
chr5_+_175298573 | 0.08 |
ENST00000512824.1 |
CPLX2 |
complexin 2 |
chr10_+_60936921 | 0.08 |
ENST00000373878.3 |
PHYHIPL |
phytanoyl-CoA 2-hydroxylase interacting protein-like |
chr1_-_40105617 | 0.08 |
ENST00000372852.3 |
HEYL |
hes-related family bHLH transcription factor with YRPW motif-like |
chr6_+_43603552 | 0.07 |
ENST00000372171.4 |
MAD2L1BP |
MAD2L1 binding protein |
chr5_-_135701164 | 0.07 |
ENST00000355180.3 ENST00000426057.2 ENST00000513104.1 |
TRPC7 |
transient receptor potential cation channel, subfamily C, member 7 |
chr4_+_96012585 | 0.07 |
ENST00000502683.1 |
BMPR1B |
bone morphogenetic protein receptor, type IB |
chr1_+_154540246 | 0.07 |
ENST00000368476.3 |
CHRNB2 |
cholinergic receptor, nicotinic, beta 2 (neuronal) |
chr12_+_113796347 | 0.07 |
ENST00000545182.2 ENST00000280800.3 |
PLBD2 |
phospholipase B domain containing 2 |
chr1_+_212606219 | 0.07 |
ENST00000366988.3 |
NENF |
neudesin neurotrophic factor |
chr18_-_40857493 | 0.07 |
ENST00000255224.3 |
SYT4 |
synaptotagmin IV |
chr3_-_8686479 | 0.07 |
ENST00000544814.1 ENST00000427408.1 |
SSUH2 |
ssu-2 homolog (C. elegans) |
chr11_-_66115032 | 0.07 |
ENST00000311181.4 |
B3GNT1 |
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1 |
chr3_+_9745487 | 0.06 |
ENST00000383832.3 |
CPNE9 |
copine family member IX |
chr2_+_46524537 | 0.06 |
ENST00000263734.3 |
EPAS1 |
endothelial PAS domain protein 1 |
chr19_-_45927097 | 0.06 |
ENST00000340192.7 |
ERCC1 |
excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) |
chr2_+_226265364 | 0.05 |
ENST00000272907.6 |
NYAP2 |
neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 |
chr19_-_40724246 | 0.05 |
ENST00000311308.6 |
TTC9B |
tetratricopeptide repeat domain 9B |
chr12_+_113229337 | 0.05 |
ENST00000552667.1 |
RPH3A |
rabphilin 3A homolog (mouse) |
chr12_+_113229737 | 0.05 |
ENST00000551052.1 ENST00000415485.3 |
RPH3A |
rabphilin 3A homolog (mouse) |
chr17_-_7218403 | 0.05 |
ENST00000570780.1 |
GPS2 |
G protein pathway suppressor 2 |
chr20_+_30555805 | 0.05 |
ENST00000562532.2 |
XKR7 |
XK, Kell blood group complex subunit-related family, member 7 |
chr5_+_167956121 | 0.05 |
ENST00000338333.4 |
FBLL1 |
fibrillarin-like 1 |
chr12_+_113229725 | 0.04 |
ENST00000551198.1 |
RPH3A |
rabphilin 3A homolog (mouse) |
chr12_-_12837423 | 0.04 |
ENST00000540510.1 |
GPR19 |
G protein-coupled receptor 19 |
chr10_-_79398127 | 0.04 |
ENST00000372443.1 |
KCNMA1 |
potassium large conductance calcium-activated channel, subfamily M, alpha member 1 |
chr6_+_25652501 | 0.04 |
ENST00000334979.6 |
SCGN |
secretagogin, EF-hand calcium binding protein |
chr12_+_113229708 | 0.04 |
ENST00000550901.1 |
RPH3A |
rabphilin 3A homolog (mouse) |
chr19_-_45926739 | 0.04 |
ENST00000589381.1 ENST00000591636.1 ENST00000013807.5 ENST00000592023.1 |
ERCC1 |
excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) |
chr15_-_72612470 | 0.03 |
ENST00000287202.5 |
CELF6 |
CUGBP, Elav-like family member 6 |
chr20_+_62327996 | 0.03 |
ENST00000369996.1 |
TNFRSF6B |
tumor necrosis factor receptor superfamily, member 6b, decoy |
chr19_-_51845378 | 0.03 |
ENST00000335624.4 |
VSIG10L |
V-set and immunoglobulin domain containing 10 like |
chr19_-_55691614 | 0.03 |
ENST00000592470.1 ENST00000354308.3 |
SYT5 |
synaptotagmin V |
chr12_-_99288986 | 0.03 |
ENST00000552407.1 ENST00000551613.1 ENST00000548447.1 ENST00000546364.3 ENST00000552748.1 |
ANKS1B |
ankyrin repeat and sterile alpha motif domain containing 1B |
chr8_-_91095099 | 0.02 |
ENST00000265431.3 |
CALB1 |
calbindin 1, 28kDa |
chr3_-_131753830 | 0.02 |
ENST00000429747.1 |
CPNE4 |
copine IV |
chr20_+_44657807 | 0.02 |
ENST00000372315.1 |
SLC12A5 |
solute carrier family 12 (potassium/chloride transporter), member 5 |
chr12_+_113229452 | 0.02 |
ENST00000389385.4 |
RPH3A |
rabphilin 3A homolog (mouse) |
chrX_-_47479246 | 0.02 |
ENST00000295987.7 ENST00000340666.4 |
SYN1 |
synapsin I |
chr18_-_40857447 | 0.01 |
ENST00000590752.1 ENST00000596867.1 |
SYT4 |
synaptotagmin IV |
chr10_+_89419370 | 0.01 |
ENST00000361175.4 ENST00000456849.1 |
PAPSS2 |
3'-phosphoadenosine 5'-phosphosulfate synthase 2 |
chr3_+_9745510 | 0.01 |
ENST00000383831.3 |
CPNE9 |
copine family member IX |
chr6_+_25652432 | 0.01 |
ENST00000377961.2 |
SCGN |
secretagogin, EF-hand calcium binding protein |
chr14_-_74892805 | 0.00 |
ENST00000331628.3 ENST00000554953.1 |
SYNDIG1L |
synapse differentiation inducing 1-like |
chr2_-_51259641 | 0.00 |
ENST00000406316.2 ENST00000405581.1 |
NRXN1 |
neurexin 1 |
chr12_-_57443886 | 0.00 |
ENST00000300119.3 |
MYO1A |
myosin IA |
chr10_-_79398250 | 0.00 |
ENST00000286627.5 |
KCNMA1 |
potassium large conductance calcium-activated channel, subfamily M, alpha member 1 |
chr6_+_158957431 | 0.00 |
ENST00000367090.3 |
TMEM181 |
transmembrane protein 181 |
chr14_-_51561784 | 0.00 |
ENST00000360392.4 |
TRIM9 |
tripartite motif containing 9 |
chr2_+_131513864 | 0.00 |
ENST00000458606.1 ENST00000423981.1 |
AMER3 |
APC membrane recruitment protein 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 0.5 | GO:1900738 | dense core granule biogenesis(GO:0061110) positive regulation of phospholipase C-activating G-protein coupled receptor signaling pathway(GO:1900738) positive regulation of relaxation of cardiac muscle(GO:1901899) regulation of dense core granule biogenesis(GO:2000705) |
0.1 | 0.4 | GO:2000987 | positive regulation of fear response(GO:1903367) positive regulation of behavioral fear response(GO:2000987) |
0.1 | 0.3 | GO:0060164 | negative regulation of auditory receptor cell differentiation(GO:0045608) negative regulation of mechanoreceptor differentiation(GO:0045632) regulation of timing of neuron differentiation(GO:0060164) negative regulation of inner ear receptor cell differentiation(GO:2000981) |
0.0 | 0.1 | GO:0021718 | superior olivary nucleus development(GO:0021718) superior olivary nucleus maturation(GO:0021722) |
0.0 | 0.2 | GO:0015891 | iron chelate transport(GO:0015688) siderophore transport(GO:0015891) |
0.0 | 0.3 | GO:0071947 | protein deubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0071947) |
0.0 | 0.2 | GO:0000720 | pyrimidine dimer repair by nucleotide-excision repair(GO:0000720) |
0.0 | 0.1 | GO:0071393 | cellular response to progesterone stimulus(GO:0071393) |
0.0 | 0.1 | GO:0019046 | release from viral latency(GO:0019046) |
0.0 | 0.4 | GO:0018231 | peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231) |
0.0 | 0.1 | GO:0035544 | negative regulation of SNARE complex assembly(GO:0035544) |
0.0 | 0.1 | GO:2000824 | negative regulation of androgen receptor activity(GO:2000824) |
0.0 | 0.3 | GO:0038003 | opioid receptor signaling pathway(GO:0038003) |
0.0 | 0.2 | GO:0036515 | serotonergic neuron axon guidance(GO:0036515) |
0.0 | 0.1 | GO:0060084 | synaptic transmission involved in micturition(GO:0060084) |
0.0 | 0.0 | GO:0000494 | box C/D snoRNA 3'-end processing(GO:0000494) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258) |
0.0 | 0.2 | GO:0035021 | negative regulation of Rac protein signal transduction(GO:0035021) |
0.0 | 0.2 | GO:0032782 | bile acid secretion(GO:0032782) |
0.0 | 0.1 | GO:0031339 | negative regulation of vesicle fusion(GO:0031339) |
0.0 | 0.3 | GO:0031915 | positive regulation of synaptic plasticity(GO:0031915) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.4 | GO:0043196 | varicosity(GO:0043196) |
0.0 | 0.1 | GO:0016533 | cyclin-dependent protein kinase 5 holoenzyme complex(GO:0016533) |
0.0 | 0.3 | GO:0070033 | synaptobrevin 2-SNAP-25-syntaxin-1a-complexin II complex(GO:0070033) synaptobrevin 2-SNAP-25-syntaxin-3-complexin complex(GO:0070554) |
0.0 | 0.2 | GO:0000110 | nucleotide-excision repair factor 1 complex(GO:0000110) |
0.0 | 0.5 | GO:0042583 | chromaffin granule(GO:0042583) |
0.0 | 0.4 | GO:0098563 | integral component of synaptic vesicle membrane(GO:0030285) intrinsic component of synaptic vesicle membrane(GO:0098563) |
0.0 | 0.4 | GO:0002178 | palmitoyltransferase complex(GO:0002178) |
0.0 | 0.2 | GO:0046581 | intercellular canaliculus(GO:0046581) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.4 | GO:0035033 | histone deacetylase regulator activity(GO:0035033) |
0.0 | 0.1 | GO:0016534 | cyclin-dependent protein kinase 5 activator activity(GO:0016534) |
0.0 | 0.2 | GO:0044736 | acid-sensing ion channel activity(GO:0044736) |
0.0 | 0.2 | GO:1990599 | 3' overhang single-stranded DNA endodeoxyribonuclease activity(GO:1990599) |
0.0 | 0.1 | GO:0035939 | microsatellite binding(GO:0035939) |
0.0 | 0.0 | GO:0036009 | protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259) |
0.0 | 0.1 | GO:0071253 | connexin binding(GO:0071253) |