A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Name | miRBASE accession |
---|---|
hsa-miR-208a-3p
|
MIMAT0000241 |
hsa-miR-208b-3p
|
MIMAT0004960 |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_+_48920960 | 0.24 |
ENST00000523111.2 ENST00000523432.1 ENST00000521346.1 ENST00000517630.1 |
UBE2V2 |
ubiquitin-conjugating enzyme E2 variant 2 |
chr6_+_105404899 | 0.22 |
ENST00000345080.4 |
LIN28B |
lin-28 homolog B (C. elegans) |
chr1_-_108507631 | 0.21 |
ENST00000527011.1 ENST00000370056.4 |
VAV3 |
vav 3 guanine nucleotide exchange factor |
chr14_-_50698276 | 0.16 |
ENST00000216373.5 |
SOS2 |
son of sevenless homolog 2 (Drosophila) |
chr15_+_44829255 | 0.14 |
ENST00000261868.5 ENST00000424492.3 |
EIF3J |
eukaryotic translation initiation factor 3, subunit J |
chr15_+_52311398 | 0.13 |
ENST00000261845.5 |
MAPK6 |
mitogen-activated protein kinase 6 |
chr10_-_89577910 | 0.13 |
ENST00000308448.7 ENST00000541004.1 |
ATAD1 |
ATPase family, AAA domain containing 1 |
chr5_+_56469775 | 0.12 |
ENST00000424459.3 |
GPBP1 |
GC-rich promoter binding protein 1 |
chr1_+_97187318 | 0.12 |
ENST00000609116.1 ENST00000370198.1 ENST00000370197.1 ENST00000426398.2 ENST00000394184.3 |
PTBP2 |
polypyrimidine tract binding protein 2 |
chr5_+_122110691 | 0.11 |
ENST00000379516.2 ENST00000505934.1 ENST00000514949.1 |
SNX2 |
sorting nexin 2 |
chr21_-_16437255 | 0.11 |
ENST00000400199.1 ENST00000400202.1 |
NRIP1 |
nuclear receptor interacting protein 1 |
chr2_+_120517174 | 0.11 |
ENST00000263708.2 |
PTPN4 |
protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte) |
chr17_-_45266542 | 0.10 |
ENST00000531206.1 ENST00000527547.1 ENST00000446365.2 ENST00000575483.1 ENST00000066544.3 |
CDC27 |
cell division cycle 27 |
chr12_-_93323013 | 0.09 |
ENST00000322349.8 |
EEA1 |
early endosome antigen 1 |
chr2_-_68290106 | 0.09 |
ENST00000407324.1 ENST00000355848.3 ENST00000409302.1 ENST00000410067.3 |
C1D |
C1D nuclear receptor corepressor |
chr10_+_98592009 | 0.09 |
ENST00000540664.1 ENST00000371103.3 |
LCOR |
ligand dependent nuclear receptor corepressor |
chrY_+_15016725 | 0.08 |
ENST00000336079.3 |
DDX3Y |
DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked |
chr5_-_76788317 | 0.07 |
ENST00000296679.4 |
WDR41 |
WD repeat domain 41 |
chr5_-_114880533 | 0.07 |
ENST00000274457.3 |
FEM1C |
fem-1 homolog c (C. elegans) |
chrX_+_41192595 | 0.07 |
ENST00000399959.2 |
DDX3X |
DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked |
chr13_-_50367057 | 0.07 |
ENST00000261667.3 |
KPNA3 |
karyopherin alpha 3 (importin alpha 4) |
chr3_+_186501336 | 0.07 |
ENST00000323963.5 ENST00000440191.2 ENST00000356531.5 |
EIF4A2 |
eukaryotic translation initiation factor 4A2 |
chr2_+_42396472 | 0.07 |
ENST00000318522.5 ENST00000402711.2 |
EML4 |
echinoderm microtubule associated protein like 4 |
chr8_+_17013515 | 0.06 |
ENST00000262096.8 |
ZDHHC2 |
zinc finger, DHHC-type containing 2 |
chr7_-_120498357 | 0.06 |
ENST00000415871.1 ENST00000222747.3 ENST00000430985.1 |
TSPAN12 |
tetraspanin 12 |
chr9_+_101867359 | 0.06 |
ENST00000374994.4 |
TGFBR1 |
transforming growth factor, beta receptor 1 |
chr7_-_105029329 | 0.06 |
ENST00000393651.3 ENST00000460391.1 |
SRPK2 |
SRSF protein kinase 2 |
chr14_-_35182994 | 0.06 |
ENST00000341223.3 |
CFL2 |
cofilin 2 (muscle) |
chr9_-_127952032 | 0.06 |
ENST00000456642.1 ENST00000373546.3 ENST00000373547.4 |
PPP6C |
protein phosphatase 6, catalytic subunit |
chr15_+_57210818 | 0.06 |
ENST00000438423.2 ENST00000267811.5 ENST00000452095.2 ENST00000559609.1 ENST00000333725.5 |
TCF12 |
transcription factor 12 |
chr10_+_112631547 | 0.06 |
ENST00000280154.7 ENST00000393104.2 |
PDCD4 |
programmed cell death 4 (neoplastic transformation inhibitor) |
chr6_-_166075557 | 0.05 |
ENST00000539869.2 ENST00000366882.1 |
PDE10A |
phosphodiesterase 10A |
chr5_+_112043186 | 0.05 |
ENST00000509732.1 ENST00000457016.1 ENST00000507379.1 |
APC |
adenomatous polyposis coli |
chr3_-_71774516 | 0.05 |
ENST00000425534.3 |
EIF4E3 |
eukaryotic translation initiation factor 4E family member 3 |
chr12_+_72148614 | 0.05 |
ENST00000261263.3 |
RAB21 |
RAB21, member RAS oncogene family |
chr8_+_38614807 | 0.05 |
ENST00000330691.6 ENST00000348567.4 |
TACC1 |
transforming, acidic coiled-coil containing protein 1 |
chr7_-_139876812 | 0.05 |
ENST00000397560.2 |
JHDM1D |
lysine (K)-specific demethylase 7A |
chrX_-_24045303 | 0.05 |
ENST00000328046.8 |
KLHL15 |
kelch-like family member 15 |
chr12_+_50135588 | 0.05 |
ENST00000423828.1 ENST00000550445.1 |
TMBIM6 |
transmembrane BAX inhibitor motif containing 6 |
chr10_-_32345305 | 0.05 |
ENST00000302418.4 |
KIF5B |
kinesin family member 5B |
chr9_-_72374848 | 0.05 |
ENST00000377200.5 ENST00000340434.4 ENST00000472967.2 |
PTAR1 |
protein prenyltransferase alpha subunit repeat containing 1 |
chr10_-_75255724 | 0.05 |
ENST00000342558.3 ENST00000360663.5 ENST00000394829.2 ENST00000394828.2 ENST00000394822.2 |
PPP3CB |
protein phosphatase 3, catalytic subunit, beta isozyme |
chr8_-_67579418 | 0.04 |
ENST00000310421.4 |
VCPIP1 |
valosin containing protein (p97)/p47 complex interacting protein 1 |
chr5_-_131132614 | 0.04 |
ENST00000307968.7 ENST00000307954.8 |
FNIP1 |
folliculin interacting protein 1 |
chr15_-_49338748 | 0.04 |
ENST00000559471.1 |
SECISBP2L |
SECIS binding protein 2-like |
chr17_-_62050278 | 0.04 |
ENST00000578147.1 ENST00000435607.1 |
SCN4A |
sodium channel, voltage-gated, type IV, alpha subunit |
chr10_-_27149792 | 0.04 |
ENST00000376140.3 ENST00000376170.4 |
ABI1 |
abl-interactor 1 |
chr3_+_43328004 | 0.04 |
ENST00000454177.1 ENST00000429705.2 ENST00000296088.7 ENST00000437827.1 |
SNRK |
SNF related kinase |
chr1_-_39339777 | 0.04 |
ENST00000397572.2 |
MYCBP |
MYC binding protein |
chr12_-_42538657 | 0.03 |
ENST00000398675.3 |
GXYLT1 |
glucoside xylosyltransferase 1 |
chr12_+_68042495 | 0.03 |
ENST00000344096.3 |
DYRK2 |
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 |
chr3_-_72496035 | 0.03 |
ENST00000477973.2 |
RYBP |
RING1 and YY1 binding protein |
chr1_-_39347255 | 0.03 |
ENST00000454994.2 ENST00000357771.3 |
GJA9 |
gap junction protein, alpha 9, 59kDa |
chr2_-_86564776 | 0.03 |
ENST00000165698.5 ENST00000541910.1 ENST00000535845.1 |
REEP1 |
receptor accessory protein 1 |
chr11_-_118047376 | 0.03 |
ENST00000278947.5 |
SCN2B |
sodium channel, voltage-gated, type II, beta subunit |
chr17_+_66508537 | 0.03 |
ENST00000392711.1 ENST00000585427.1 ENST00000589228.1 ENST00000536854.2 ENST00000588702.1 ENST00000589309.1 |
PRKAR1A |
protein kinase, cAMP-dependent, regulatory, type I, alpha |
chrX_+_136648297 | 0.03 |
ENST00000287538.5 |
ZIC3 |
Zic family member 3 |
chr20_+_48552908 | 0.03 |
ENST00000244061.2 |
RNF114 |
ring finger protein 114 |
chr13_+_50571155 | 0.03 |
ENST00000420995.2 ENST00000378182.3 ENST00000356017.4 ENST00000457662.2 |
TRIM13 |
tripartite motif containing 13 |
chr6_-_13711773 | 0.03 |
ENST00000011619.3 |
RANBP9 |
RAN binding protein 9 |
chr7_-_30029367 | 0.02 |
ENST00000242059.5 |
SCRN1 |
secernin 1 |
chr7_+_65338230 | 0.02 |
ENST00000360768.3 |
VKORC1L1 |
vitamin K epoxide reductase complex, subunit 1-like 1 |
chr11_-_86666427 | 0.02 |
ENST00000531380.1 |
FZD4 |
frizzled family receptor 4 |
chr4_-_100871506 | 0.02 |
ENST00000296417.5 |
H2AFZ |
H2A histone family, member Z |
chr8_+_42752053 | 0.02 |
ENST00000307602.4 |
HOOK3 |
hook microtubule-tethering protein 3 |
chr13_+_100258907 | 0.02 |
ENST00000376355.3 ENST00000376360.1 ENST00000444838.2 ENST00000376354.1 ENST00000339105.4 |
CLYBL |
citrate lyase beta like |
chr13_+_49550015 | 0.02 |
ENST00000492622.2 |
FNDC3A |
fibronectin type III domain containing 3A |
chr6_+_133562472 | 0.02 |
ENST00000430974.2 ENST00000367895.5 ENST00000355167.3 ENST00000355286.6 |
EYA4 |
eyes absent homolog 4 (Drosophila) |
chr8_-_23712312 | 0.02 |
ENST00000290271.2 |
STC1 |
stanniocalcin 1 |
chr1_-_55680762 | 0.02 |
ENST00000407756.1 ENST00000294383.6 |
USP24 |
ubiquitin specific peptidase 24 |
chr7_-_106301405 | 0.02 |
ENST00000523505.1 |
CCDC71L |
coiled-coil domain containing 71-like |
chr15_-_56535464 | 0.02 |
ENST00000559447.2 ENST00000422057.1 ENST00000317318.6 ENST00000423270.1 |
RFX7 |
regulatory factor X, 7 |
chr6_+_163835669 | 0.01 |
ENST00000453779.2 ENST00000275262.7 ENST00000392127.2 ENST00000361752.3 |
QKI |
QKI, KH domain containing, RNA binding |
chr8_+_56014949 | 0.01 |
ENST00000327381.6 |
XKR4 |
XK, Kell blood group complex subunit-related family, member 4 |
chr17_+_11144580 | 0.01 |
ENST00000441885.3 ENST00000432116.3 ENST00000409168.3 |
SHISA6 |
shisa family member 6 |
chr3_+_29322803 | 0.01 |
ENST00000396583.3 ENST00000383767.2 |
RBMS3 |
RNA binding motif, single stranded interacting protein 3 |
chr3_-_18466787 | 0.01 |
ENST00000338745.6 ENST00000450898.1 |
SATB1 |
SATB homeobox 1 |
chr15_+_101142722 | 0.01 |
ENST00000332783.7 ENST00000558747.1 ENST00000343276.4 |
ASB7 |
ankyrin repeat and SOCS box containing 7 |
chr17_-_5389477 | 0.01 |
ENST00000572834.1 ENST00000570848.1 ENST00000571971.1 ENST00000158771.4 |
DERL2 |
derlin 2 |
chr14_-_21737610 | 0.01 |
ENST00000320084.7 ENST00000449098.1 ENST00000336053.6 |
HNRNPC |
heterogeneous nuclear ribonucleoprotein C (C1/C2) |
chr2_-_174830430 | 0.01 |
ENST00000310015.6 ENST00000455789.2 |
SP3 |
Sp3 transcription factor |
chr17_-_73775839 | 0.01 |
ENST00000592643.1 ENST00000591890.1 ENST00000587171.1 ENST00000254810.4 ENST00000589599.1 |
H3F3B |
H3 histone, family 3B (H3.3B) |
chr12_-_12419703 | 0.01 |
ENST00000543091.1 ENST00000261349.4 |
LRP6 |
low density lipoprotein receptor-related protein 6 |
chr7_-_44924939 | 0.01 |
ENST00000395699.2 |
PURB |
purine-rich element binding protein B |
chr1_+_110527308 | 0.01 |
ENST00000369799.5 |
AHCYL1 |
adenosylhomocysteinase-like 1 |
chr9_+_96793076 | 0.01 |
ENST00000375360.3 |
PTPDC1 |
protein tyrosine phosphatase domain containing 1 |
chr1_-_205782304 | 0.01 |
ENST00000367137.3 |
SLC41A1 |
solute carrier family 41 (magnesium transporter), member 1 |
chr2_-_208030647 | 0.01 |
ENST00000309446.6 |
KLF7 |
Kruppel-like factor 7 (ubiquitous) |
chr9_-_16870704 | 0.00 |
ENST00000380672.4 ENST00000380667.2 ENST00000380666.2 ENST00000486514.1 |
BNC2 |
basonuclin 2 |
chr16_-_46655538 | 0.00 |
ENST00000303383.3 |
SHCBP1 |
SHC SH2-domain binding protein 1 |
chr9_+_82186872 | 0.00 |
ENST00000376544.3 ENST00000376520.4 |
TLE4 |
transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) |
chr12_-_99548270 | 0.00 |
ENST00000546568.1 ENST00000332712.7 ENST00000546960.1 |
ANKS1B |
ankyrin repeat and sterile alpha motif domain containing 1B |
chr7_+_155089486 | 0.00 |
ENST00000340368.4 ENST00000344756.4 ENST00000425172.1 ENST00000342407.5 |
INSIG1 |
insulin induced gene 1 |
chr12_-_92539614 | 0.00 |
ENST00000256015.3 |
BTG1 |
B-cell translocation gene 1, anti-proliferative |
chr5_-_79287060 | 0.00 |
ENST00000512560.1 ENST00000509852.1 ENST00000512528.1 |
MTX3 |
metaxin 3 |
chr7_+_90225796 | 0.00 |
ENST00000380050.3 |
CDK14 |
cyclin-dependent kinase 14 |
chr5_+_129240151 | 0.00 |
ENST00000305031.4 |
CHSY3 |
chondroitin sulfate synthase 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | GO:0001543 | ovarian follicle rupture(GO:0001543) |
0.0 | 0.2 | GO:0010587 | miRNA catabolic process(GO:0010587) |
0.0 | 0.1 | GO:1904761 | negative regulation of myofibroblast differentiation(GO:1904761) |
0.0 | 0.1 | GO:1905073 | occluding junction disassembly(GO:1905071) regulation of occluding junction disassembly(GO:1905073) positive regulation of occluding junction disassembly(GO:1905075) |
0.0 | 0.1 | GO:0035063 | nuclear speck organization(GO:0035063) |
0.0 | 0.0 | GO:0002904 | positive regulation of B cell apoptotic process(GO:0002904) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.2 | GO:0031372 | UBC13-MMS2 complex(GO:0031372) |
0.0 | 0.1 | GO:0030905 | retromer, tubulation complex(GO:0030905) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | GO:1990460 | leptin receptor binding(GO:1990460) |
0.0 | 0.0 | GO:0099609 | microtubule lateral binding(GO:0099609) |