A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
HMGA2
|
ENSG00000149948.9 | HMGA2 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
HMGA2 | hg19_v2_chr12_+_66217911_66218018 | 0.70 | 1.2e-01 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_+_65996599 | 0.52 |
ENST00000539116.1 ENST00000541391.1 |
RP11-221N13.3 |
RP11-221N13.3 |
chr19_+_44455368 | 0.36 |
ENST00000591168.1 ENST00000587682.1 ENST00000251269.5 |
ZNF221 |
zinc finger protein 221 |
chr6_-_107230334 | 0.32 |
ENST00000607090.1 |
RP1-60O19.1 |
RP1-60O19.1 |
chr1_+_196621002 | 0.29 |
ENST00000367429.4 ENST00000439155.2 |
CFH |
complement factor H |
chr1_+_227751231 | 0.27 |
ENST00000343776.5 ENST00000608949.1 ENST00000397097.3 |
ZNF678 |
zinc finger protein 678 |
chr9_+_42704004 | 0.26 |
ENST00000457288.1 |
CBWD7 |
COBW domain containing 7 |
chr10_-_36813162 | 0.24 |
ENST00000440465.1 |
NAMPTL |
nicotinamide phosphoribosyltransferase-like |
chr1_+_196621156 | 0.23 |
ENST00000359637.2 |
CFH |
complement factor H |
chr19_-_38146289 | 0.23 |
ENST00000392144.1 ENST00000591444.1 ENST00000351218.2 ENST00000587809.1 |
ZFP30 |
ZFP30 zinc finger protein |
chr6_+_116892641 | 0.21 |
ENST00000487832.2 ENST00000518117.1 |
RWDD1 |
RWD domain containing 1 |
chr1_+_227751281 | 0.19 |
ENST00000440339.1 |
ZNF678 |
zinc finger protein 678 |
chr5_-_102455801 | 0.17 |
ENST00000508629.1 ENST00000399004.2 |
GIN1 |
gypsy retrotransposon integrase 1 |
chr14_+_45553296 | 0.17 |
ENST00000355765.6 ENST00000553605.1 |
PRPF39 |
pre-mRNA processing factor 39 |
chr19_-_36297632 | 0.17 |
ENST00000588266.2 |
PRODH2 |
proline dehydrogenase (oxidase) 2 |
chr4_+_40058411 | 0.17 |
ENST00000261435.6 ENST00000515550.1 |
N4BP2 |
NEDD4 binding protein 2 |
chr4_+_25378912 | 0.16 |
ENST00000510092.1 ENST00000505991.1 |
ANAPC4 |
anaphase promoting complex subunit 4 |
chr20_+_54967663 | 0.15 |
ENST00000452950.1 |
CSTF1 |
cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa |
chr1_-_67600639 | 0.14 |
ENST00000544837.1 ENST00000603691.1 |
C1orf141 |
chromosome 1 open reading frame 141 |
chr10_+_96305535 | 0.14 |
ENST00000419900.1 ENST00000348459.5 ENST00000394045.1 ENST00000394044.1 ENST00000394036.1 |
HELLS |
helicase, lymphoid-specific |
chr6_-_127664736 | 0.14 |
ENST00000368291.2 ENST00000309620.9 ENST00000454859.3 |
ECHDC1 |
enoyl CoA hydratase domain containing 1 |
chr15_+_43885252 | 0.14 |
ENST00000453782.1 ENST00000300283.6 ENST00000437924.1 ENST00000450086.2 |
CKMT1B |
creatine kinase, mitochondrial 1B |
chr2_+_170683979 | 0.13 |
ENST00000418381.1 |
UBR3 |
ubiquitin protein ligase E3 component n-recognin 3 (putative) |
chr16_+_66442411 | 0.13 |
ENST00000499966.1 |
LINC00920 |
long intergenic non-protein coding RNA 920 |
chr12_-_8765446 | 0.12 |
ENST00000537228.1 ENST00000229335.6 |
AICDA |
activation-induced cytidine deaminase |
chr6_-_127664683 | 0.12 |
ENST00000528402.1 ENST00000454591.2 |
ECHDC1 |
enoyl CoA hydratase domain containing 1 |
chr19_+_11457175 | 0.12 |
ENST00000458408.1 ENST00000586451.1 ENST00000588592.1 |
CCDC159 |
coiled-coil domain containing 159 |
chr10_+_86184676 | 0.12 |
ENST00000543283.1 |
CCSER2 |
coiled-coil serine-rich protein 2 |
chr3_-_123680246 | 0.12 |
ENST00000488653.2 |
CCDC14 |
coiled-coil domain containing 14 |
chr2_+_177134201 | 0.12 |
ENST00000452865.1 |
MTX2 |
metaxin 2 |
chr19_+_41882466 | 0.11 |
ENST00000436170.2 |
TMEM91 |
transmembrane protein 91 |
chr3_+_106959552 | 0.11 |
ENST00000473550.1 |
LINC00883 |
long intergenic non-protein coding RNA 883 |
chr3_+_186501336 | 0.09 |
ENST00000323963.5 ENST00000440191.2 ENST00000356531.5 |
EIF4A2 |
eukaryotic translation initiation factor 4A2 |
chr18_-_29340827 | 0.09 |
ENST00000269205.5 |
SLC25A52 |
solute carrier family 25, member 52 |
chr15_-_70994612 | 0.09 |
ENST00000558758.1 ENST00000379983.2 ENST00000560441.1 |
UACA |
uveal autoantigen with coiled-coil domains and ankyrin repeats |
chr13_+_51483814 | 0.09 |
ENST00000336617.3 ENST00000422660.1 |
RNASEH2B |
ribonuclease H2, subunit B |
chr12_-_10324716 | 0.09 |
ENST00000545927.1 ENST00000432556.2 ENST00000309539.3 ENST00000544577.1 |
OLR1 |
oxidized low density lipoprotein (lectin-like) receptor 1 |
chr2_-_287320 | 0.09 |
ENST00000401503.1 |
FAM150B |
family with sequence similarity 150, member B |
chr2_+_172544182 | 0.09 |
ENST00000409197.1 ENST00000456808.1 ENST00000409317.1 ENST00000409773.1 ENST00000411953.1 ENST00000409453.1 |
DYNC1I2 |
dynein, cytoplasmic 1, intermediate chain 2 |
chr2_+_170683942 | 0.09 |
ENST00000272793.5 |
UBR3 |
ubiquitin protein ligase E3 component n-recognin 3 (putative) |
chrX_-_77150985 | 0.09 |
ENST00000358075.6 |
MAGT1 |
magnesium transporter 1 |
chr2_+_172543967 | 0.09 |
ENST00000534253.2 ENST00000263811.4 ENST00000397119.3 ENST00000410079.3 ENST00000438879.1 |
DYNC1I2 |
dynein, cytoplasmic 1, intermediate chain 2 |
chr14_+_88852059 | 0.08 |
ENST00000045347.7 |
SPATA7 |
spermatogenesis associated 7 |
chr17_+_73230799 | 0.08 |
ENST00000579838.1 |
NUP85 |
nucleoporin 85kDa |
chrX_-_7895755 | 0.08 |
ENST00000444736.1 ENST00000537427.1 ENST00000442940.1 |
PNPLA4 |
patatin-like phospholipase domain containing 4 |
chr6_-_136571400 | 0.07 |
ENST00000418509.2 ENST00000420702.1 ENST00000451457.2 |
MTFR2 |
mitochondrial fission regulator 2 |
chr14_-_94759595 | 0.07 |
ENST00000261994.4 |
SERPINA10 |
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10 |
chr2_-_287299 | 0.07 |
ENST00000405290.1 |
FAM150B |
family with sequence similarity 150, member B |
chr15_+_84904525 | 0.06 |
ENST00000510439.2 |
GOLGA6L4 |
golgin A6 family-like 4 |
chr1_+_179263308 | 0.06 |
ENST00000426956.1 |
SOAT1 |
sterol O-acyltransferase 1 |
chr12_+_69979210 | 0.06 |
ENST00000544368.2 |
CCT2 |
chaperonin containing TCP1, subunit 2 (beta) |
chr14_-_94759361 | 0.06 |
ENST00000393096.1 |
SERPINA10 |
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10 |
chr2_+_172544011 | 0.06 |
ENST00000508530.1 |
DYNC1I2 |
dynein, cytoplasmic 1, intermediate chain 2 |
chr14_-_94759408 | 0.06 |
ENST00000554723.1 |
SERPINA10 |
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10 |
chr6_-_160209471 | 0.05 |
ENST00000539948.1 |
TCP1 |
t-complex 1 |
chr1_+_64014588 | 0.05 |
ENST00000371086.2 ENST00000340052.3 |
DLEU2L |
deleted in lymphocytic leukemia 2-like |
chr1_+_55464600 | 0.05 |
ENST00000371265.4 |
BSND |
Bartter syndrome, infantile, with sensorineural deafness (Barttin) |
chr18_+_11851383 | 0.05 |
ENST00000526991.2 |
CHMP1B |
charged multivesicular body protein 1B |
chrX_+_117480036 | 0.05 |
ENST00000371822.5 ENST00000254029.3 ENST00000371825.3 |
WDR44 |
WD repeat domain 44 |
chr16_+_53483983 | 0.05 |
ENST00000544545.1 |
RBL2 |
retinoblastoma-like 2 (p130) |
chr14_+_37641012 | 0.05 |
ENST00000556667.1 |
SLC25A21-AS1 |
SLC25A21 antisense RNA 1 |
chr7_-_102985035 | 0.05 |
ENST00000426036.2 ENST00000249270.7 ENST00000454277.1 ENST00000412522.1 |
DNAJC2 |
DnaJ (Hsp40) homolog, subfamily C, member 2 |
chr11_-_19223523 | 0.04 |
ENST00000265968.3 |
CSRP3 |
cysteine and glycine-rich protein 3 (cardiac LIM protein) |
chr12_+_69979113 | 0.04 |
ENST00000299300.6 |
CCT2 |
chaperonin containing TCP1, subunit 2 (beta) |
chr15_+_82722225 | 0.04 |
ENST00000300515.8 |
GOLGA6L9 |
golgin A6 family-like 9 |
chr2_+_177134134 | 0.04 |
ENST00000249442.6 ENST00000392529.2 ENST00000443241.1 |
MTX2 |
metaxin 2 |
chr10_-_62332357 | 0.04 |
ENST00000503366.1 |
ANK3 |
ankyrin 3, node of Ranvier (ankyrin G) |
chr10_+_35456444 | 0.04 |
ENST00000361599.4 |
CREM |
cAMP responsive element modulator |
chrX_-_153523462 | 0.04 |
ENST00000361930.3 ENST00000369926.1 |
TEX28 |
testis expressed 28 |
chr15_+_30427352 | 0.04 |
ENST00000569052.1 |
GOLGA8T |
golgin A8 family, member T |
chr7_-_102985288 | 0.04 |
ENST00000379263.3 |
DNAJC2 |
DnaJ (Hsp40) homolog, subfamily C, member 2 |
chr19_-_43099070 | 0.04 |
ENST00000244336.5 |
CEACAM8 |
carcinoembryonic antigen-related cell adhesion molecule 8 |
chrY_+_22918021 | 0.04 |
ENST00000288666.5 |
RPS4Y2 |
ribosomal protein S4, Y-linked 2 |
chr2_-_216257849 | 0.04 |
ENST00000456923.1 |
FN1 |
fibronectin 1 |
chr15_-_74659978 | 0.04 |
ENST00000541301.1 ENST00000416978.1 ENST00000268053.6 |
CYP11A1 |
cytochrome P450, family 11, subfamily A, polypeptide 1 |
chr20_+_46130619 | 0.03 |
ENST00000372004.3 |
NCOA3 |
nuclear receptor coactivator 3 |
chr1_-_226374373 | 0.03 |
ENST00000366812.5 |
ACBD3 |
acyl-CoA binding domain containing 3 |
chr12_-_10573149 | 0.03 |
ENST00000381904.2 ENST00000381903.2 ENST00000396439.2 |
KLRC3 |
killer cell lectin-like receptor subfamily C, member 3 |
chr3_-_157221380 | 0.03 |
ENST00000468233.1 |
VEPH1 |
ventricular zone expressed PH domain-containing 1 |
chr12_+_59194154 | 0.03 |
ENST00000548969.1 |
RP11-362K2.2 |
Protein LOC100506869 |
chrX_-_135962876 | 0.03 |
ENST00000431446.3 ENST00000570135.1 ENST00000320676.7 ENST00000562646.1 |
RBMX |
RNA binding motif protein, X-linked |
chr11_-_18063973 | 0.03 |
ENST00000528338.1 |
TPH1 |
tryptophan hydroxylase 1 |
chr6_+_31887761 | 0.02 |
ENST00000413154.1 |
C2 |
complement component 2 |
chr5_-_135290651 | 0.02 |
ENST00000522943.1 ENST00000514447.2 |
LECT2 |
leukocyte cell-derived chemotaxin 2 |
chr20_+_48884002 | 0.02 |
ENST00000425497.1 ENST00000445003.1 |
RP11-290F20.3 |
RP11-290F20.3 |
chr3_-_157221357 | 0.02 |
ENST00000494677.1 |
VEPH1 |
ventricular zone expressed PH domain-containing 1 |
chr2_+_172543919 | 0.02 |
ENST00000452242.1 ENST00000340296.4 |
DYNC1I2 |
dynein, cytoplasmic 1, intermediate chain 2 |
chr3_+_106959530 | 0.02 |
ENST00000466734.1 ENST00000463143.1 ENST00000490441.1 |
LINC00883 |
long intergenic non-protein coding RNA 883 |
chr9_-_115480303 | 0.02 |
ENST00000374234.1 ENST00000374238.1 ENST00000374236.1 ENST00000374242.4 |
INIP |
INTS3 and NABP interacting protein |
chr9_+_108463234 | 0.02 |
ENST00000374688.1 |
TMEM38B |
transmembrane protein 38B |
chr6_-_32908792 | 0.02 |
ENST00000418107.2 |
HLA-DMB |
major histocompatibility complex, class II, DM beta |
chrX_+_2670153 | 0.02 |
ENST00000509484.2 |
XG |
Xg blood group |
chr2_-_151395525 | 0.02 |
ENST00000439275.1 |
RND3 |
Rho family GTPase 3 |
chr9_+_104296122 | 0.02 |
ENST00000389120.3 |
RNF20 |
ring finger protein 20, E3 ubiquitin protein ligase |
chr12_-_122750957 | 0.02 |
ENST00000451053.2 |
VPS33A |
vacuolar protein sorting 33 homolog A (S. cerevisiae) |
chr6_+_111580508 | 0.01 |
ENST00000368847.4 |
KIAA1919 |
KIAA1919 |
chr2_-_183387064 | 0.01 |
ENST00000536095.1 ENST00000331935.6 ENST00000358139.2 ENST00000456212.1 |
PDE1A |
phosphodiesterase 1A, calmodulin-dependent |
chr20_+_46130671 | 0.01 |
ENST00000371998.3 ENST00000371997.3 |
NCOA3 |
nuclear receptor coactivator 3 |
chr15_+_28623784 | 0.01 |
ENST00000526619.2 ENST00000337838.7 ENST00000532622.2 |
GOLGA8F |
golgin A8 family, member F |
chr3_-_106959424 | 0.01 |
ENST00000607801.1 ENST00000479612.2 ENST00000484698.1 ENST00000477210.2 ENST00000473636.1 |
LINC00882 |
long intergenic non-protein coding RNA 882 |
chr1_+_197886461 | 0.01 |
ENST00000367388.3 ENST00000337020.2 ENST00000367387.4 |
LHX9 |
LIM homeobox 9 |
chr12_-_122751002 | 0.01 |
ENST00000267199.4 |
VPS33A |
vacuolar protein sorting 33 homolog A (S. cerevisiae) |
chr6_+_88106840 | 0.01 |
ENST00000369570.4 |
C6orf164 |
chromosome 6 open reading frame 164 |
chr1_+_2487402 | 0.01 |
ENST00000451778.1 |
TNFRSF14 |
tumor necrosis factor receptor superfamily, member 14 |
chr15_+_88120158 | 0.01 |
ENST00000560153.1 |
LINC00052 |
long intergenic non-protein coding RNA 52 |
chr1_+_2487800 | 0.00 |
ENST00000355716.4 |
TNFRSF14 |
tumor necrosis factor receptor superfamily, member 14 |
chr20_+_46130601 | 0.00 |
ENST00000341724.6 |
NCOA3 |
nuclear receptor coactivator 3 |
chr14_-_65409502 | 0.00 |
ENST00000389614.5 |
GPX2 |
glutathione peroxidase 2 (gastrointestinal) |
chrX_-_77150911 | 0.00 |
ENST00000373336.3 |
MAGT1 |
magnesium transporter 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.2 | GO:0071596 | ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596) |
0.0 | 0.1 | GO:0031508 | pericentric heterochromatin assembly(GO:0031508) |
0.0 | 0.1 | GO:0051086 | chaperone mediated protein folding independent of cofactor(GO:0051086) |
0.0 | 0.5 | GO:0006957 | complement activation, alternative pathway(GO:0006957) |
0.0 | 0.2 | GO:0008218 | bioluminescence(GO:0008218) |
0.0 | 0.2 | GO:2000825 | positive regulation of androgen receptor activity(GO:2000825) |
0.0 | 0.2 | GO:0010133 | proline catabolic process to glutamate(GO:0010133) |
0.0 | 0.3 | GO:2000576 | positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582) |
0.0 | 0.2 | GO:0000395 | mRNA 5'-splice site recognition(GO:0000395) |
0.0 | 0.1 | GO:0051083 | 'de novo' cotranslational protein folding(GO:0051083) |
0.0 | 0.1 | GO:0009972 | cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087) |
0.0 | 0.1 | GO:0042000 | translocation of peptides or proteins into host(GO:0042000) translocation of peptides or proteins into host cell cytoplasm(GO:0044053) translocation of molecules into host(GO:0044417) translocation of peptides or proteins into other organism involved in symbiotic interaction(GO:0051808) translocation of molecules into other organism involved in symbiotic interaction(GO:0051836) |
0.0 | 0.2 | GO:0015074 | DNA integration(GO:0015074) |
0.0 | 0.0 | GO:1904235 | regulation of substrate-dependent cell migration, cell attachment to substrate(GO:1904235) positive regulation of substrate-dependent cell migration, cell attachment to substrate(GO:1904237) |
0.0 | 0.0 | GO:0035995 | detection of muscle stretch(GO:0035995) |
0.0 | 0.1 | GO:0042986 | positive regulation of amyloid precursor protein biosynthetic process(GO:0042986) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.1 | GO:0032299 | ribonuclease H2 complex(GO:0032299) |
0.0 | 0.2 | GO:0000243 | commitment complex(GO:0000243) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.3 | GO:0004492 | methylmalonyl-CoA decarboxylase activity(GO:0004492) |
0.1 | 0.2 | GO:0030627 | pre-mRNA 5'-splice site binding(GO:0030627) |
0.0 | 0.2 | GO:0004657 | proline dehydrogenase activity(GO:0004657) |
0.0 | 0.2 | GO:0046404 | ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity(GO:0046404) polydeoxyribonucleotide kinase activity(GO:0051733) ATP-dependent polynucleotide kinase activity(GO:0051734) |
0.0 | 0.5 | GO:0043395 | heparan sulfate proteoglycan binding(GO:0043395) |
0.0 | 0.1 | GO:0004772 | sterol O-acyltransferase activity(GO:0004772) cholesterol O-acyltransferase activity(GO:0034736) |
0.0 | 0.1 | GO:0004126 | cytidine deaminase activity(GO:0004126) |
0.0 | 0.3 | GO:0045504 | dynein heavy chain binding(GO:0045504) |
0.0 | 0.1 | GO:0061649 | ubiquitinated histone binding(GO:0061649) |
0.0 | 0.0 | GO:0008386 | cholesterol monooxygenase (side-chain-cleaving) activity(GO:0008386) |
0.0 | 0.1 | GO:0004523 | RNA-DNA hybrid ribonuclease activity(GO:0004523) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.5 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |