A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
NR1D1
|
ENSG00000126368.5 | NR1D1 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
NR1D1 | hg19_v2_chr17_-_38256973_38256990 | -0.78 | 6.6e-02 | Click! |
Promoter | Score | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_-_182703688 | 0.45 |
ENST00000466812.1 ENST00000487822.1 ENST00000460412.1 ENST00000469954.1 |
DCUN1D1 |
DCN1, defective in cullin neddylation 1, domain containing 1 |
chr7_+_64126535 | 0.41 |
ENST00000344930.3 |
ZNF107 |
zinc finger protein 107 |
chr17_-_59940705 | 0.39 |
ENST00000577913.1 |
BRIP1 |
BRCA1 interacting protein C-terminal helicase 1 |
chr19_+_21203426 | 0.34 |
ENST00000261560.5 ENST00000599548.1 ENST00000594110.1 |
ZNF430 |
zinc finger protein 430 |
chr19_+_38880695 | 0.31 |
ENST00000587947.1 ENST00000338502.4 |
SPRED3 |
sprouty-related, EVH1 domain containing 3 |
chr22_-_20138302 | 0.29 |
ENST00000540078.1 ENST00000439765.2 |
AC006547.14 |
uncharacterized protein LOC388849 |
chr9_+_91150016 | 0.26 |
ENST00000375854.3 ENST00000375855.3 |
NXNL2 |
nucleoredoxin-like 2 |
chr9_+_116343192 | 0.26 |
ENST00000471324.2 |
RGS3 |
regulator of G-protein signaling 3 |
chr5_-_111312622 | 0.26 |
ENST00000395634.3 |
NREP |
neuronal regeneration related protein |
chrX_+_54947229 | 0.23 |
ENST00000442098.1 ENST00000430420.1 ENST00000453081.1 ENST00000173898.7 ENST00000319167.8 ENST00000375022.4 ENST00000399736.1 ENST00000440072.1 ENST00000420798.2 ENST00000431115.1 ENST00000440759.1 ENST00000375041.2 |
TRO |
trophinin |
chr12_-_123755639 | 0.23 |
ENST00000535979.1 |
CDK2AP1 |
cyclin-dependent kinase 2 associated protein 1 |
chr1_-_197169672 | 0.22 |
ENST00000367405.4 |
ZBTB41 |
zinc finger and BTB domain containing 41 |
chr1_+_44398943 | 0.21 |
ENST00000372359.5 ENST00000414809.3 |
ARTN |
artemin |
chr7_+_94139105 | 0.21 |
ENST00000297273.4 |
CASD1 |
CAS1 domain containing 1 |
chr19_-_23578220 | 0.21 |
ENST00000595533.1 ENST00000397082.2 ENST00000599743.1 ENST00000300619.7 |
ZNF91 |
zinc finger protein 91 |
chr3_-_45957088 | 0.21 |
ENST00000539217.1 |
LZTFL1 |
leucine zipper transcription factor-like 1 |
chr17_-_38074842 | 0.20 |
ENST00000309481.7 |
GSDMB |
gasdermin B |
chr19_-_23433144 | 0.20 |
ENST00000418100.1 ENST00000597537.1 ENST00000597037.1 |
ZNF724P |
zinc finger protein 724, pseudogene |
chr19_-_42927251 | 0.18 |
ENST00000597001.1 |
LIPE |
lipase, hormone-sensitive |
chr19_-_58071166 | 0.18 |
ENST00000601415.1 |
ZNF550 |
zinc finger protein 550 |
chr6_-_135424186 | 0.18 |
ENST00000529882.1 |
HBS1L |
HBS1-like (S. cerevisiae) |
chr14_-_50999307 | 0.17 |
ENST00000013125.4 |
MAP4K5 |
mitogen-activated protein kinase kinase kinase kinase 5 |
chr14_-_24733444 | 0.17 |
ENST00000560478.1 ENST00000560443.1 |
TGM1 |
transglutaminase 1 |
chr17_-_38074859 | 0.16 |
ENST00000520542.1 ENST00000418519.1 ENST00000394179.1 |
GSDMB |
gasdermin B |
chr10_-_105156198 | 0.16 |
ENST00000369815.1 ENST00000309579.3 ENST00000337003.4 |
USMG5 |
up-regulated during skeletal muscle growth 5 homolog (mouse) |
chr1_+_110210644 | 0.16 |
ENST00000369831.2 ENST00000442650.1 ENST00000369827.3 ENST00000460717.3 ENST00000241337.4 ENST00000467579.3 ENST00000414179.2 ENST00000369829.2 |
GSTM2 |
glutathione S-transferase mu 2 (muscle) |
chr17_-_72588422 | 0.15 |
ENST00000375352.1 |
CD300LD |
CD300 molecule-like family member d |
chr3_+_169755715 | 0.15 |
ENST00000355897.5 |
GPR160 |
G protein-coupled receptor 160 |
chr19_+_35810164 | 0.13 |
ENST00000598537.1 |
CD22 |
CD22 molecule |
chr17_-_79139817 | 0.13 |
ENST00000326724.4 |
AATK |
apoptosis-associated tyrosine kinase |
chr19_+_21324863 | 0.12 |
ENST00000598331.1 |
ZNF431 |
zinc finger protein 431 |
chr11_-_125365435 | 0.11 |
ENST00000524435.1 |
FEZ1 |
fasciculation and elongation protein zeta 1 (zygin I) |
chr10_-_8095412 | 0.11 |
ENST00000458727.1 ENST00000355358.1 |
RP11-379F12.3 GATA3-AS1 |
RP11-379F12.3 GATA3 antisense RNA 1 |
chr1_-_11865982 | 0.11 |
ENST00000418034.1 |
MTHFR |
methylenetetrahydrofolate reductase (NAD(P)H) |
chr5_-_43313574 | 0.11 |
ENST00000325110.6 ENST00000433297.2 |
HMGCS1 |
3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) |
chr14_-_50999190 | 0.10 |
ENST00000557390.1 |
MAP4K5 |
mitogen-activated protein kinase kinase kinase kinase 5 |
chr19_-_51220176 | 0.10 |
ENST00000359082.3 ENST00000293441.1 |
SHANK1 |
SH3 and multiple ankyrin repeat domains 1 |
chr7_-_100493482 | 0.10 |
ENST00000411582.1 ENST00000419336.2 ENST00000241069.5 ENST00000302913.4 |
ACHE |
acetylcholinesterase (Yt blood group) |
chr1_-_26232522 | 0.10 |
ENST00000399728.1 |
STMN1 |
stathmin 1 |
chr3_+_58223228 | 0.09 |
ENST00000478253.1 ENST00000295962.4 |
ABHD6 |
abhydrolase domain containing 6 |
chr2_+_203776937 | 0.09 |
ENST00000402905.3 ENST00000414490.1 ENST00000431787.1 ENST00000444724.1 ENST00000414857.1 ENST00000430899.1 ENST00000445120.1 ENST00000441569.1 ENST00000432024.1 ENST00000443740.1 ENST00000414439.1 ENST00000428585.1 ENST00000545253.1 ENST00000545262.1 ENST00000447539.1 ENST00000456821.2 ENST00000434998.1 ENST00000320443.8 |
CARF |
calcium responsive transcription factor |
chr9_+_136243117 | 0.09 |
ENST00000426926.2 ENST00000371957.3 |
C9orf96 |
chromosome 9 open reading frame 96 |
chr6_+_63921351 | 0.08 |
ENST00000370659.1 |
FKBP1C |
FK506 binding protein 1C |
chr14_+_50999744 | 0.08 |
ENST00000441560.2 |
ATL1 |
atlastin GTPase 1 |
chr6_+_76458990 | 0.08 |
ENST00000369977.3 |
MYO6 |
myosin VI |
chr1_-_26233423 | 0.08 |
ENST00000357865.2 |
STMN1 |
stathmin 1 |
chr3_-_49203744 | 0.08 |
ENST00000321895.6 |
CCDC71 |
coiled-coil domain containing 71 |
chr17_-_74528128 | 0.08 |
ENST00000590175.1 |
CYGB |
cytoglobin |
chr12_-_110883346 | 0.08 |
ENST00000547365.1 |
ARPC3 |
actin related protein 2/3 complex, subunit 3, 21kDa |
chr1_+_218519577 | 0.08 |
ENST00000366930.4 ENST00000366929.4 |
TGFB2 |
transforming growth factor, beta 2 |
chr16_-_70712229 | 0.08 |
ENST00000562883.2 |
MTSS1L |
metastasis suppressor 1-like |
chr19_+_21265028 | 0.08 |
ENST00000291770.7 |
ZNF714 |
zinc finger protein 714 |
chr15_-_65903407 | 0.07 |
ENST00000395644.4 ENST00000567744.1 ENST00000568573.1 ENST00000562830.1 ENST00000569491.1 ENST00000561769.1 |
VWA9 |
von Willebrand factor A domain containing 9 |
chr8_+_101162812 | 0.07 |
ENST00000353107.3 ENST00000522439.1 |
POLR2K |
polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa |
chr2_+_63816295 | 0.07 |
ENST00000539945.1 ENST00000544381.1 |
MDH1 |
malate dehydrogenase 1, NAD (soluble) |
chr4_-_21699380 | 0.07 |
ENST00000382148.3 |
KCNIP4 |
Kv channel interacting protein 4 |
chr15_+_65903680 | 0.07 |
ENST00000537259.1 |
SLC24A1 |
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 |
chr1_+_161719552 | 0.07 |
ENST00000367943.4 |
DUSP12 |
dual specificity phosphatase 12 |
chr16_+_4606347 | 0.07 |
ENST00000444310.4 |
C16orf96 |
chromosome 16 open reading frame 96 |
chr9_-_131155773 | 0.06 |
ENST00000608502.1 |
MIR219-2 |
microRNA 219-2 |
chr9_-_37592561 | 0.06 |
ENST00000544379.1 ENST00000377773.5 ENST00000401811.3 ENST00000321301.6 |
TOMM5 |
translocase of outer mitochondrial membrane 5 homolog (yeast) |
chr7_-_37488547 | 0.06 |
ENST00000453399.1 |
ELMO1 |
engulfment and cell motility 1 |
chr17_+_6899366 | 0.06 |
ENST00000251535.6 |
ALOX12 |
arachidonate 12-lipoxygenase |
chr19_-_19932501 | 0.06 |
ENST00000540806.2 ENST00000590766.1 ENST00000587452.1 ENST00000545006.1 ENST00000590319.1 ENST00000587461.1 ENST00000450683.2 ENST00000443905.2 ENST00000590274.1 |
ZNF506 CTC-559E9.4 |
zinc finger protein 506 CTC-559E9.4 |
chr6_-_27440837 | 0.06 |
ENST00000211936.6 |
ZNF184 |
zinc finger protein 184 |
chr19_+_21264943 | 0.06 |
ENST00000597424.1 |
ZNF714 |
zinc finger protein 714 |
chr3_-_52002194 | 0.06 |
ENST00000466412.1 |
PCBP4 |
poly(rC) binding protein 4 |
chr19_-_18995029 | 0.05 |
ENST00000596048.1 |
CERS1 |
ceramide synthase 1 |
chr4_+_1873155 | 0.05 |
ENST00000507820.1 ENST00000514045.1 |
WHSC1 |
Wolf-Hirschhorn syndrome candidate 1 |
chr17_-_1029866 | 0.05 |
ENST00000570525.1 |
ABR |
active BCR-related |
chr3_-_117716418 | 0.05 |
ENST00000484092.1 |
RP11-384F7.2 |
RP11-384F7.2 |
chr19_+_22235279 | 0.05 |
ENST00000594363.1 ENST00000597927.1 ENST00000594947.1 |
ZNF257 |
zinc finger protein 257 |
chr1_-_26232951 | 0.05 |
ENST00000426559.2 ENST00000455785.2 |
STMN1 |
stathmin 1 |
chr13_+_113622757 | 0.05 |
ENST00000375604.2 |
MCF2L |
MCF.2 cell line derived transforming sequence-like |
chr1_+_159796534 | 0.04 |
ENST00000289707.5 |
SLAMF8 |
SLAM family member 8 |
chr7_+_64126503 | 0.04 |
ENST00000360117.3 |
ZNF107 |
zinc finger protein 107 |
chr9_+_101569944 | 0.04 |
ENST00000375011.3 |
GALNT12 |
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12) |
chrX_+_24167746 | 0.04 |
ENST00000428571.1 ENST00000539115.1 |
ZFX |
zinc finger protein, X-linked |
chr7_-_128694927 | 0.04 |
ENST00000471166.1 ENST00000265388.5 |
TNPO3 |
transportin 3 |
chr9_+_126773880 | 0.04 |
ENST00000373615.4 |
LHX2 |
LIM homeobox 2 |
chr15_-_65903512 | 0.04 |
ENST00000567923.1 |
VWA9 |
von Willebrand factor A domain containing 9 |
chr16_+_71392616 | 0.04 |
ENST00000349553.5 ENST00000302628.4 ENST00000562305.1 |
CALB2 |
calbindin 2 |
chr13_+_113622810 | 0.04 |
ENST00000397030.1 |
MCF2L |
MCF.2 cell line derived transforming sequence-like |
chr1_-_226374373 | 0.04 |
ENST00000366812.5 |
ACBD3 |
acyl-CoA binding domain containing 3 |
chr2_+_63816269 | 0.04 |
ENST00000432309.1 |
MDH1 |
malate dehydrogenase 1, NAD (soluble) |
chr5_-_43313269 | 0.04 |
ENST00000511774.1 |
HMGCS1 |
3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) |
chr8_+_11561660 | 0.04 |
ENST00000526716.1 ENST00000335135.4 ENST00000528027.1 |
GATA4 |
GATA binding protein 4 |
chr6_+_31543334 | 0.03 |
ENST00000449264.2 |
TNF |
tumor necrosis factor |
chr3_+_169755919 | 0.03 |
ENST00000492492.1 |
GPR160 |
G protein-coupled receptor 160 |
chr2_+_63816087 | 0.03 |
ENST00000409908.1 ENST00000442225.1 ENST00000409476.1 ENST00000436321.1 |
MDH1 |
malate dehydrogenase 1, NAD (soluble) |
chr6_+_76458909 | 0.03 |
ENST00000369981.3 ENST00000369985.4 |
MYO6 |
myosin VI |
chr7_-_100493744 | 0.03 |
ENST00000428317.1 ENST00000441605.1 |
ACHE |
acetylcholinesterase (Yt blood group) |
chr13_+_100741269 | 0.02 |
ENST00000376286.4 ENST00000376279.3 ENST00000376285.1 |
PCCA |
propionyl CoA carboxylase, alpha polypeptide |
chrX_+_68725084 | 0.02 |
ENST00000252338.4 |
FAM155B |
family with sequence similarity 155, member B |
chr1_-_11865351 | 0.02 |
ENST00000413656.1 ENST00000376585.1 ENST00000423400.1 ENST00000431243.1 |
MTHFR |
methylenetetrahydrofolate reductase (NAD(P)H) |
chr2_-_89513402 | 0.02 |
ENST00000498435.1 |
IGKV1-27 |
immunoglobulin kappa variable 1-27 |
chrY_+_2803322 | 0.02 |
ENST00000383052.1 ENST00000155093.3 ENST00000449237.1 ENST00000443793.1 |
ZFY |
zinc finger protein, Y-linked |
chr7_-_44229022 | 0.02 |
ENST00000403799.3 |
GCK |
glucokinase (hexokinase 4) |
chr2_+_113342163 | 0.02 |
ENST00000409719.1 |
CHCHD5 |
coiled-coil-helix-coiled-coil-helix domain containing 5 |
chr12_-_7125770 | 0.02 |
ENST00000261407.4 |
LPCAT3 |
lysophosphatidylcholine acyltransferase 3 |
chr10_+_23217006 | 0.01 |
ENST00000376528.4 ENST00000447081.1 |
ARMC3 |
armadillo repeat containing 3 |
chr17_-_36347030 | 0.01 |
ENST00000518551.1 |
TBC1D3 |
TBC1 domain family, member 3 |
chr1_+_197382957 | 0.01 |
ENST00000367397.1 |
CRB1 |
crumbs homolog 1 (Drosophila) |
chr1_-_32403903 | 0.01 |
ENST00000344035.6 ENST00000356536.3 |
PTP4A2 |
protein tyrosine phosphatase type IVA, member 2 |
chr2_+_63816126 | 0.01 |
ENST00000454035.1 |
MDH1 |
malate dehydrogenase 1, NAD (soluble) |
chr9_-_35112376 | 0.01 |
ENST00000488109.2 |
FAM214B |
family with sequence similarity 214, member B |
chr15_-_65903574 | 0.01 |
ENST00000420799.2 ENST00000313182.2 ENST00000431261.2 ENST00000442903.3 |
VWA9 |
von Willebrand factor A domain containing 9 |
chr16_-_18468926 | 0.01 |
ENST00000545114.1 |
RP11-1212A22.4 |
LOC339047 protein; Nuclear pore complex-interacting protein family member A3; Nuclear pore complex-interacting protein family member A5; Protein PKD1P1 |
chr19_+_22235310 | 0.01 |
ENST00000600162.1 |
ZNF257 |
zinc finger protein 257 |
chr2_-_73053126 | 0.01 |
ENST00000272427.6 ENST00000410104.1 |
EXOC6B |
exocyst complex component 6B |
chr1_+_2398876 | 0.01 |
ENST00000449969.1 |
PLCH2 |
phospholipase C, eta 2 |
chr1_-_154178803 | 0.01 |
ENST00000368525.3 |
C1orf189 |
chromosome 1 open reading frame 189 |
chr19_-_22605136 | 0.01 |
ENST00000357774.5 ENST00000601553.1 ENST00000593657.1 |
ZNF98 |
zinc finger protein 98 |
chr18_-_19284724 | 0.01 |
ENST00000580981.1 ENST00000289119.2 |
ABHD3 |
abhydrolase domain containing 3 |
chr2_+_220306745 | 0.01 |
ENST00000431523.1 ENST00000396698.1 ENST00000396695.2 |
SPEG |
SPEG complex locus |
chr1_-_6557156 | 0.01 |
ENST00000537245.1 |
PLEKHG5 |
pleckstrin homology domain containing, family G (with RhoGef domain) member 5 |
chr13_+_113623509 | 0.00 |
ENST00000535094.2 |
MCF2L |
MCF.2 cell line derived transforming sequence-like |
chr17_-_76128488 | 0.00 |
ENST00000322914.3 |
TMC6 |
transmembrane channel-like 6 |
chrX_-_49089771 | 0.00 |
ENST00000376251.1 ENST00000323022.5 ENST00000376265.2 |
CACNA1F |
calcium channel, voltage-dependent, L type, alpha 1F subunit |
chr14_-_50999373 | 0.00 |
ENST00000554273.1 |
MAP4K5 |
mitogen-activated protein kinase kinase kinase kinase 5 |
chr1_-_41131326 | 0.00 |
ENST00000372684.3 |
RIMS3 |
regulating synaptic membrane exocytosis 3 |
chr17_+_15637150 | 0.00 |
ENST00000578506.1 |
TBC1D26 |
TBC1 domain family, member 26 |
chr22_-_28316116 | 0.00 |
ENST00000415296.1 |
PITPNB |
phosphatidylinositol transfer protein, beta |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.4 | GO:0000706 | meiotic DNA double-strand break processing(GO:0000706) double-strand break repair involved in meiotic recombination(GO:1990918) |
0.1 | 0.2 | GO:1903565 | negative regulation of protein localization to cilium(GO:1903565) regulation of protein localization to ciliary membrane(GO:1903567) negative regulation of protein localization to ciliary membrane(GO:1903568) |
0.0 | 0.2 | GO:0046340 | diacylglycerol catabolic process(GO:0046340) |
0.0 | 0.1 | GO:0045212 | negative regulation of synaptic transmission, cholinergic(GO:0032223) neurotransmitter receptor biosynthetic process(GO:0045212) |
0.0 | 0.1 | GO:0050894 | determination of affect(GO:0050894) |
0.0 | 0.2 | GO:1905098 | negative regulation of guanyl-nucleotide exchange factor activity(GO:1905098) |
0.0 | 0.1 | GO:0003275 | apoptotic process involved in outflow tract morphogenesis(GO:0003275) uterine wall breakdown(GO:0042704) positive regulation of catagen(GO:0051795) regulation of apoptotic process involved in outflow tract morphogenesis(GO:1902256) |
0.0 | 0.2 | GO:0097021 | lymphocyte migration into lymphoid organs(GO:0097021) |
0.0 | 0.2 | GO:0070458 | cellular detoxification of nitrogen compound(GO:0070458) |
0.0 | 0.2 | GO:0043163 | cell envelope organization(GO:0043163) external encapsulating structure organization(GO:0045229) |
0.0 | 0.5 | GO:0045116 | protein neddylation(GO:0045116) |
0.0 | 0.1 | GO:0072720 | cellular response to mycotoxin(GO:0036146) response to dithiothreitol(GO:0072720) |
0.0 | 0.2 | GO:0015074 | DNA integration(GO:0015074) |
0.0 | 0.1 | GO:0071926 | endocannabinoid signaling pathway(GO:0071926) regulation of endocannabinoid signaling pathway(GO:2000124) |
0.0 | 0.1 | GO:0071372 | cellular response to follicle-stimulating hormone stimulus(GO:0071372) |
0.0 | 0.1 | GO:0035865 | cellular response to potassium ion(GO:0035865) |
0.0 | 0.1 | GO:2000490 | negative regulation of hepatic stellate cell activation(GO:2000490) |
0.0 | 0.0 | GO:1901671 | regulation of chronic inflammatory response to antigenic stimulus(GO:0002874) positive regulation of humoral immune response mediated by circulating immunoglobulin(GO:0002925) positive regulation of translational initiation by iron(GO:0045994) positive regulation of superoxide dismutase activity(GO:1901671) positive regulation of removal of superoxide radicals(GO:1904833) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.2 | GO:0033878 | hormone-sensitive lipase activity(GO:0033878) |
0.0 | 0.2 | GO:0047860 | diiodophenylpyruvate reductase activity(GO:0047860) |
0.0 | 0.1 | GO:0060001 | minus-end directed microfilament motor activity(GO:0060001) |
0.0 | 0.2 | GO:0016413 | O-acetyltransferase activity(GO:0016413) |
0.0 | 0.1 | GO:0031877 | somatostatin receptor binding(GO:0031877) |
0.0 | 0.1 | GO:0003990 | acetylcholinesterase activity(GO:0003990) |
0.0 | 0.1 | GO:0047888 | fatty acid peroxidase activity(GO:0047888) |
0.0 | 0.1 | GO:0034714 | type III transforming growth factor beta receptor binding(GO:0034714) |
0.0 | 0.5 | GO:0097602 | cullin family protein binding(GO:0097602) |
0.0 | 0.3 | GO:0004791 | thioredoxin-disulfide reductase activity(GO:0004791) |
0.0 | 0.1 | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer(GO:0046912) |
0.0 | 0.2 | GO:0003810 | protein-glutamine gamma-glutamyltransferase activity(GO:0003810) |
0.0 | 0.3 | GO:0008349 | MAP kinase kinase kinase kinase activity(GO:0008349) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.4 | REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS | Genes involved in Homologous recombination repair of replication-independent double-strand breaks |