A549 cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
BARHL1 | hg19_v2_chr9_+_135458021_135458046 | 0.89 | 1.8e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_27998689 Show fit | 8.07 |
ENST00000339145.4
ENST00000362020.4 ENST00000361157.6 |
interferon, alpha-inducible protein 6 |
|
chr10_+_91152303 Show fit | 6.22 |
ENST00000371804.3
|
interferon-induced protein with tetratricopeptide repeats 1 |
|
chrM_+_10464 Show fit | 4.86 |
ENST00000361335.1
|
mitochondrially encoded NADH dehydrogenase 4L |
|
chr1_+_948803 Show fit | 4.02 |
ENST00000379389.4
|
ISG15 ubiquitin-like modifier |
|
chr5_-_87516448 Show fit | 3.50 |
ENST00000511218.1
|
transmembrane protein 161B |
|
chr8_-_150563 Show fit | 3.01 |
ENST00000523795.2
|
Protein LOC100286914 |
|
chrM_+_10758 Show fit | 2.91 |
ENST00000361381.2
|
mitochondrially encoded NADH dehydrogenase 4 |
|
chr12_+_113354341 Show fit | 2.88 |
ENST00000553152.1
|
2'-5'-oligoadenylate synthetase 1, 40/46kDa |
|
chr14_+_57671888 Show fit | 2.41 |
ENST00000391612.1
|
AL391152.1 |
|
chr2_-_37374876 Show fit | 2.39 |
ENST00000405334.1
|
eukaryotic translation initiation factor 2-alpha kinase 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.7 | GO:0006120 | mitochondrial electron transport, NADH to ubiquinone(GO:0006120) |
0.1 | 8.4 | GO:0071357 | type I interferon signaling pathway(GO:0060337) cellular response to type I interferon(GO:0071357) |
0.7 | 8.1 | GO:0051902 | negative regulation of mitochondrial depolarization(GO:0051902) |
1.6 | 6.2 | GO:0051097 | negative regulation of helicase activity(GO:0051097) |
0.4 | 4.9 | GO:0032020 | ISG15-protein conjugation(GO:0032020) |
1.1 | 4.5 | GO:0034344 | type III interferon production(GO:0034343) regulation of type III interferon production(GO:0034344) |
0.1 | 4.3 | GO:0000413 | protein peptidyl-prolyl isomerization(GO:0000413) |
0.2 | 4.1 | GO:0071985 | multivesicular body sorting pathway(GO:0071985) |
0.2 | 3.9 | GO:0051988 | regulation of attachment of spindle microtubules to kinetochore(GO:0051988) |
0.1 | 3.7 | GO:0051383 | kinetochore organization(GO:0051383) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.1 | GO:0044215 | other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217) |
0.0 | 6.4 | GO:0032587 | ruffle membrane(GO:0032587) |
0.0 | 6.3 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.1 | 6.1 | GO:0030964 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.0 | 4.2 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 3.8 | GO:0000776 | kinetochore(GO:0000776) |
0.0 | 3.7 | GO:0001650 | fibrillar center(GO:0001650) |
0.2 | 3.6 | GO:0000940 | condensed chromosome outer kinetochore(GO:0000940) |
0.1 | 3.5 | GO:0030992 | intraciliary transport particle B(GO:0030992) |
0.0 | 3.4 | GO:0005793 | endoplasmic reticulum-Golgi intermediate compartment(GO:0005793) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 10.4 | GO:0050136 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
0.6 | 7.1 | GO:0001730 | 2'-5'-oligoadenylate synthetase activity(GO:0001730) |
0.1 | 6.6 | GO:0003727 | single-stranded RNA binding(GO:0003727) |
0.1 | 4.6 | GO:0044183 | protein binding involved in protein folding(GO:0044183) |
0.3 | 4.3 | GO:0031386 | protein tag(GO:0031386) |
0.1 | 4.0 | GO:0008574 | ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574) |
0.0 | 3.9 | GO:0001227 | transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227) |
0.4 | 3.5 | GO:0043515 | kinetochore binding(GO:0043515) |
0.1 | 3.3 | GO:0043295 | glutathione binding(GO:0043295) |
0.0 | 3.3 | GO:0004712 | protein serine/threonine/tyrosine kinase activity(GO:0004712) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.0 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.1 | 4.4 | PID PLK1 PATHWAY | PLK1 signaling events |
0.1 | 4.1 | PID BARD1 PATHWAY | BARD1 signaling events |
0.0 | 3.7 | PID TCPTP PATHWAY | Signaling events mediated by TCPTP |
0.0 | 3.5 | PID INTEGRIN3 PATHWAY | Beta3 integrin cell surface interactions |
0.0 | 3.5 | PID ERBB1 DOWNSTREAM PATHWAY | ErbB1 downstream signaling |
0.2 | 2.8 | ST INTERFERON GAMMA PATHWAY | Interferon gamma pathway. |
0.0 | 2.6 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.1 | 2.5 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.0 | 2.5 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 32.4 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.1 | 9.8 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.0 | 6.9 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
0.3 | 4.4 | REACTOME TRAF3 DEPENDENT IRF ACTIVATION PATHWAY | Genes involved in TRAF3-dependent IRF activation pathway |
0.1 | 4.0 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |
0.1 | 4.0 | REACTOME NEGATIVE REGULATORS OF RIG I MDA5 SIGNALING | Genes involved in Negative regulators of RIG-I/MDA5 signaling |
0.1 | 3.4 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.0 | 3.4 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.2 | 3.0 | REACTOME ACYL CHAIN REMODELLING OF PG | Genes involved in Acyl chain remodelling of PG |
0.0 | 2.9 | REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES | Genes involved in Antiviral mechanism by IFN-stimulated genes |