Results for YPR196W
Z-value: 0.72
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Transcription factors associated with YPR196W
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
| S000006400 | Putative maltose-responsive transcription factor |
Activity-expression correlation:
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| YFR056C Show fit | 2.82 |
Dubious open reading frame unlikely to encode a protein based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YFR055W |
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| YHR095W Show fit | 2.66 |
Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data |
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| YHR094C Show fit | 2.44 |
Low-affinity glucose transporter of the major facilitator superfamily, expression is induced by Hxk2p in the presence of glucose and repressed by Rgt1p when glucose is limiting |
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| YGL035C Show fit | 1.97 |
Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase |
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| YNL178W Show fit | 1.90 |
Protein component of the small (40S) ribosomal subunit, has apurinic/apyrimidinic (AP) endonuclease activity; essential for viability; has similarity to E. coli S3 and rat S3 ribosomal proteins |
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| YFR054C Show fit | 1.84 |
Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data |
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| YDR278C Show fit | 1.83 |
Dubious open reading frame unlikely to encode a functional protein, based on available experimental and comparative sequence data |
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| YKR075C Show fit | 1.80 |
Protein of unknown function; similar to YOR062Cp and Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS |
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| YPL026C Show fit | 1.68 |
Putative serine/threonine protein kinase; involved in the adaptation to low concentrations of glucose independent of the SNF3 regulated pathway |
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| YGL033W Show fit | 1.65 |
Meiosis-specific protein that localizes to chromosomes, preventing synapsis between nonhomologous chromosomes and ensuring synapsis between homologs; complexes with Mnd1p to promote homolog pairing and meiotic double-strand break repair |
Network of associatons between targets according to the STRING database.
First level regulatory network of YPR196W
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 7.0 | GO:0002181 | cytoplasmic translation(GO:0002181) |
| 0.8 | 3.1 | GO:1900436 | filamentous growth of a population of unicellular organisms in response to starvation(GO:0036170) regulation of filamentous growth of a population of unicellular organisms in response to starvation(GO:1900434) positive regulation of filamentous growth of a population of unicellular organisms in response to starvation(GO:1900436) |
| 0.1 | 2.4 | GO:0051445 | regulation of meiotic nuclear division(GO:0040020) regulation of meiotic cell cycle(GO:0051445) |
| 0.1 | 2.3 | GO:0007129 | synapsis(GO:0007129) |
| 0.3 | 1.9 | GO:0043137 | DNA replication, removal of RNA primer(GO:0043137) |
| 0.2 | 1.9 | GO:0000056 | ribosomal small subunit export from nucleus(GO:0000056) |
| 0.2 | 1.8 | GO:0015758 | glucose transport(GO:0015758) |
| 0.3 | 1.6 | GO:1901072 | aminoglycan catabolic process(GO:0006026) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072) |
| 0.5 | 1.5 | GO:0000098 | sulfur amino acid catabolic process(GO:0000098) |
| 0.4 | 1.5 | GO:0000092 | mitotic anaphase B(GO:0000092) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 12.8 | GO:0005634 | nucleus(GO:0005634) |
| 0.1 | 4.4 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
| 0.1 | 3.5 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
| 0.0 | 2.5 | GO:0005935 | cellular bud neck(GO:0005935) |
| 0.4 | 2.2 | GO:0005641 | nuclear envelope lumen(GO:0005641) |
| 0.6 | 1.9 | GO:0032299 | ribonuclease H2 complex(GO:0032299) |
| 0.2 | 1.9 | GO:0030688 | preribosome, small subunit precursor(GO:0030688) |
| 0.0 | 1.9 | GO:0000794 | condensed nuclear chromosome(GO:0000794) |
| 0.0 | 1.8 | GO:0030686 | 90S preribosome(GO:0030686) |
| 0.0 | 1.6 | GO:0016591 | DNA-directed RNA polymerase II, holoenzyme(GO:0016591) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 7.3 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
| 0.0 | 5.4 | GO:0004674 | protein serine/threonine kinase activity(GO:0004674) |
| 0.3 | 5.3 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
| 0.6 | 3.4 | GO:0005354 | galactose transmembrane transporter activity(GO:0005354) |
| 0.0 | 3.0 | GO:0003690 | double-stranded DNA binding(GO:0003690) |
| 0.0 | 2.3 | GO:0019001 | GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561) |
| 0.3 | 2.1 | GO:0003906 | DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906) |
| 0.0 | 2.1 | GO:0000982 | transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0000982) |
| 0.5 | 1.9 | GO:0004523 | RNA-DNA hybrid ribonuclease activity(GO:0004523) |
| 0.1 | 1.9 | GO:0001102 | RNA polymerase II activating transcription factor binding(GO:0001102) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 18.3 | PID VEGFR1 PATHWAY | VEGFR1 specific signals |
| 0.3 | 1.4 | PID ERBB4 PATHWAY | ErbB4 signaling events |
| 0.0 | 0.5 | NABA MATRISOME ASSOCIATED | Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors |
| 0.1 | 0.4 | PID MYC PATHWAY | C-MYC pathway |
| 0.1 | 0.4 | PID E2F PATHWAY | E2F transcription factor network |
| 0.0 | 0.3 | PID ATR PATHWAY | ATR signaling pathway |
| 0.1 | 0.2 | PID ATM PATHWAY | ATM pathway |
| 0.0 | 0.1 | PID SHP2 PATHWAY | SHP2 signaling |
| 0.0 | 0.0 | PID PDGFRB PATHWAY | PDGFR-beta signaling pathway |
| 0.0 | 0.0 | PID TELOMERASE PATHWAY | Regulation of Telomerase |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 18.6 | REACTOME GLYCOSAMINOGLYCAN METABOLISM | Genes involved in Glycosaminoglycan metabolism |
| 0.3 | 2.3 | REACTOME ACTIVATION OF THE MRNA UPON BINDING OF THE CAP BINDING COMPLEX AND EIFS AND SUBSEQUENT BINDING TO 43S | Genes involved in Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S |
| 0.5 | 1.4 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
| 0.1 | 1.1 | REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX | Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex |
| 0.1 | 0.8 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |
| 0.1 | 0.6 | REACTOME RNA POL II TRANSCRIPTION | Genes involved in RNA Polymerase II Transcription |
| 0.1 | 0.4 | REACTOME G1 S SPECIFIC TRANSCRIPTION | Genes involved in G1/S-Specific Transcription |
| 0.0 | 0.4 | REACTOME G2 M CHECKPOINTS | Genes involved in G2/M Checkpoints |
| 0.2 | 0.3 | REACTOME REGULATION OF MRNA STABILITY BY PROTEINS THAT BIND AU RICH ELEMENTS | Genes involved in Regulation of mRNA Stability by Proteins that Bind AU-rich Elements |
| 0.1 | 0.3 | REACTOME CLEAVAGE OF GROWING TRANSCRIPT IN THE TERMINATION REGION | Genes involved in Cleavage of Growing Transcript in the Termination Region |