Results for YPR013C
Z-value: 1.32
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Transcription factors associated with YPR013C
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
| S000006217 | Putative zinc finger protein |
Activity-expression correlation:
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| YKL163W Show fit | 13.19 |
O-glycosylated covalently-bound cell wall protein required for cell wall stability; expression is cell cycle regulated, peaking in M/G1 and also subject to regulation by the cell integrity pathway |
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| YIL057C Show fit | 7.23 |
Putative protein of unknown function; expression induced under carbon limitation and repressed under high glucose |
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| YAR053W Show fit | 7.01 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data |
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| YHR211W Show fit | 6.80 |
Lectin-like cell wall protein (flocculin) involved in flocculation, binds to mannose chains on the surface of other cells, confers floc-forming ability that is chymotrypsin resistant but heat labile; similar to Flo1p |
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| YOR348C Show fit | 6.75 |
Proline permease, required for high-affinity transport of proline; also transports the toxic proline analog azetidine-2-carboxylate (AzC); PUT4 transcription is repressed in ammonia-grown cells |
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| YPL271W Show fit | 6.74 |
Epsilon subunit of the F1 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; phosphorylated |
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| YER067C-A Show fit | 6.70 |
Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YER067W |
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| YFL051C Show fit | 6.63 |
Putative protein of unknown function; YFL051C is not an essential gene |
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| YKL093W Show fit | 6.35 |
Protein involved in mitochondrial functions and stress response; overexpression suppresses growth defects of hap2, hap3, and hap4 mutants |
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| YBL049W Show fit | 6.20 |
Protein of unknown function, has homology to kinase Snf7p; not required for growth on nonfermentable carbon sources; essential for viability in stationary phase |
Network of associatons between targets according to the STRING database.
First level regulatory network of YPR013C
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.0 | 14.5 | GO:0015986 | energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986) |
| 0.6 | 12.7 | GO:0098656 | anion transmembrane transport(GO:0098656) |
| 1.7 | 9.9 | GO:0000501 | flocculation(GO:0000128) flocculation via cell wall protein-carbohydrate interaction(GO:0000501) |
| 0.2 | 8.8 | GO:0009060 | aerobic respiration(GO:0009060) |
| 0.7 | 8.2 | GO:0015758 | glucose transport(GO:0015758) |
| 1.6 | 7.8 | GO:0032974 | amino acid transmembrane export from vacuole(GO:0032974) vacuolar transmembrane transport(GO:0034486) vacuolar amino acid transmembrane transport(GO:0034487) amino acid transmembrane export(GO:0044746) |
| 0.2 | 7.7 | GO:0007131 | reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825) |
| 1.9 | 7.6 | GO:0015804 | neutral amino acid transport(GO:0015804) |
| 0.8 | 7.2 | GO:0006537 | glutamate biosynthetic process(GO:0006537) |
| 0.4 | 6.5 | GO:0009228 | thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 17.3 | GO:0005739 | mitochondrion(GO:0005739) |
| 0.0 | 14.5 | GO:0005886 | plasma membrane(GO:0005886) |
| 0.1 | 13.7 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
| 0.7 | 13.1 | GO:0031306 | intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307) |
| 0.1 | 7.4 | GO:0098852 | fungal-type vacuole membrane(GO:0000329) lytic vacuole membrane(GO:0098852) |
| 2.4 | 7.3 | GO:0031166 | integral component of vacuolar membrane(GO:0031166) |
| 0.2 | 7.2 | GO:0005758 | mitochondrial intermembrane space(GO:0005758) |
| 2.4 | 7.1 | GO:0045269 | mitochondrial proton-transporting ATP synthase, central stalk(GO:0005756) proton-transporting ATP synthase, central stalk(GO:0045269) |
| 1.9 | 5.8 | GO:0045252 | mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial oxoglutarate dehydrogenase complex(GO:0009353) dihydrolipoyl dehydrogenase complex(GO:0045240) oxoglutarate dehydrogenase complex(GO:0045252) |
| 0.2 | 4.8 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 1.3 | 14.5 | GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism(GO:0046933) |
| 3.0 | 11.9 | GO:0015193 | L-proline transmembrane transporter activity(GO:0015193) |
| 2.3 | 11.3 | GO:0015295 | solute:proton symporter activity(GO:0015295) |
| 2.7 | 10.9 | GO:0005537 | mannose binding(GO:0005537) |
| 0.7 | 8.1 | GO:0051184 | cofactor transporter activity(GO:0051184) |
| 1.0 | 7.7 | GO:0015174 | basic amino acid transmembrane transporter activity(GO:0015174) |
| 0.5 | 6.6 | GO:0031625 | ubiquitin protein ligase binding(GO:0031625) ubiquitin-like protein ligase binding(GO:0044389) |
| 0.4 | 6.2 | GO:0004601 | peroxidase activity(GO:0004601) oxidoreductase activity, acting on peroxide as acceptor(GO:0016684) |
| 1.5 | 6.1 | GO:0004737 | pyruvate decarboxylase activity(GO:0004737) |
| 1.8 | 5.5 | GO:0036440 | citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 61.8 | ST DIFFERENTIATION PATHWAY IN PC12 CELLS | Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway. |
| 0.6 | 2.6 | PID ERBB4 PATHWAY | ErbB4 signaling events |
| 0.7 | 2.2 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
| 0.5 | 1.0 | PID A6B1 A6B4 INTEGRIN PATHWAY | a6b1 and a6b4 Integrin signaling |
| 0.2 | 0.4 | PID ANGIOPOIETIN RECEPTOR PATHWAY | Angiopoietin receptor Tie2-mediated signaling |
| 0.1 | 0.3 | PID CMYB PATHWAY | C-MYB transcription factor network |
| 0.1 | 0.1 | PID TCR PATHWAY | TCR signaling in naïve CD4+ T cells |
| 0.0 | 0.1 | PID ATM PATHWAY | ATM pathway |
| 0.0 | 0.1 | PID NOTCH PATHWAY | Notch signaling pathway |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 60.3 | REACTOME CHONDROITIN SULFATE BIOSYNTHESIS | Genes involved in Chondroitin sulfate biosynthesis |
| 0.9 | 2.6 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |
| 0.8 | 2.5 | REACTOME RESPIRATORY ELECTRON TRANSPORT ATP SYNTHESIS BY CHEMIOSMOTIC COUPLING AND HEAT PRODUCTION BY UNCOUPLING PROTEINS | Genes involved in Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins. |
| 0.3 | 2.4 | REACTOME MEIOTIC RECOMBINATION | Genes involved in Meiotic Recombination |
| 0.5 | 2.0 | REACTOME BIOLOGICAL OXIDATIONS | Genes involved in Biological oxidations |
| 0.4 | 1.4 | REACTOME NGF SIGNALLING VIA TRKA FROM THE PLASMA MEMBRANE | Genes involved in NGF signalling via TRKA from the plasma membrane |
| 0.3 | 1.0 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
| 0.2 | 0.8 | REACTOME TCA CYCLE AND RESPIRATORY ELECTRON TRANSPORT | Genes involved in The citric acid (TCA) cycle and respiratory electron transport |
| 0.1 | 0.6 | REACTOME CHROMOSOME MAINTENANCE | Genes involved in Chromosome Maintenance |
| 0.0 | 0.4 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |