GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr20_+_47779056 Show fit	0.23	ENSRNOT00000090015	AC132752.1 Links NCBI RGD Ensembl Show fit
chr13_+_60619309 Show fit	0.11	ENSRNOT00000082129	AABR07021204.1 Links NCBI RGD Ensembl Show fit
chr3_-_107760550 Show fit	0.10	ENSRNOT00000077091 ENSRNOT00000051638	Meis2 Links NCBI RGD Ensembl Show fit	Meis homeobox 2
chr7_-_76035096 Show fit	0.07	ENSRNOT00000072255	AABR07057530.1 Links NCBI RGD Ensembl Show fit
chr8_-_62987182 Show fit	0.05	ENSRNOT00000070885	Islr2 Links NCBI RGD Ensembl Show fit	immunoglobulin superfamily containing leucine-rich repeat 2
chr15_-_52399074 Show fit	0.05	ENSRNOT00000018440	Xpo7 Links NCBI RGD Ensembl Show fit	exportin 7
chr17_-_77687456 Show fit	0.04	ENSRNOT00000045765 ENSRNOT00000081645	Frmd4a Links NCBI RGD Ensembl Show fit	FERM domain containing 4A
chr5_+_63781801 Show fit	0.04	ENSRNOT00000008302	Nr4a3 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 4, group A, member 3
chr14_-_12387102 Show fit	0.04	ENSRNOT00000038872	Bmp3 Links NCBI RGD Ensembl Show fit	bone morphogenetic protein 3
chr12_+_31934343 Show fit	0.04	ENSRNOT00000011181	Tmem132d Links NCBI RGD Ensembl Show fit	transmembrane protein 132D
chr7_-_3074359 Show fit	0.03	ENSRNOT00000019738	Ikzf4 Links NCBI RGD Ensembl Show fit	IKAROS family zinc finger 4
chr15_+_23665202 Show fit	0.03	ENSRNOT00000089226	Samd4a Links NCBI RGD Ensembl Show fit	sterile alpha motif domain containing 4A
chr1_+_170262156 Show fit	0.03	ENSRNOT00000024077 ENSRNOT00000085395	Cckbr Links NCBI RGD Ensembl Show fit	cholecystokinin B receptor
chr9_+_16862248 Show fit	0.03	ENSRNOT00000080104 ENSRNOT00000024824	Ttbk1 Links NCBI RGD Ensembl Show fit	tau tubulin kinase 1
chr7_+_99954492 Show fit	0.03	ENSRNOT00000005885	Trib1 Links NCBI RGD Ensembl Show fit	tribbles pseudokinase 1
chr18_-_14016713 Show fit	0.03	ENSRNOT00000041125	Nol4 Links NCBI RGD Ensembl Show fit	nucleolar protein 4
chr4_-_126644895 Show fit	0.03	ENSRNOT00000017384 ENSRNOT00000072624	Lrig1 Links NCBI RGD Ensembl Show fit	leucine-rich repeats and immunoglobulin-like domains 1
chr3_+_171832500 Show fit	0.03	ENSRNOT00000007554	Vapb Links NCBI RGD Ensembl Show fit	VAMP associated protein B and C
chr17_-_9791781 Show fit	0.02	ENSRNOT00000090536	Rgs14 Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 14
chr1_-_239057732 Show fit	0.02	ENSRNOT00000024775	Gda Links NCBI RGD Ensembl Show fit	guanine deaminase
chr1_-_82610350 Show fit	0.02	ENSRNOT00000028177	Cyp2s1 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 2, subfamily s, polypeptide 1
chr17_-_9792007 Show fit	0.02	ENSRNOT00000021596	Rgs14 Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 14
chr7_-_140483693 Show fit	0.02	ENSRNOT00000089060	Ddn Links NCBI RGD Ensembl Show fit	dendrin
chr3_+_138974871 Show fit	0.02	ENSRNOT00000012524	Scp2d1 Links NCBI RGD Ensembl Show fit	SCP2 sterol-binding domain containing 1
chr4_-_144416116 Show fit	0.02	ENSRNOT00000007724	Oxtr Links NCBI RGD Ensembl Show fit	oxytocin receptor
chr18_+_59748444 Show fit	0.02	ENSRNOT00000024752	St8sia3 Links NCBI RGD Ensembl Show fit	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
chr10_+_27973681 Show fit	0.02	ENSRNOT00000004970	Gabrb2 Links NCBI RGD Ensembl Show fit	gamma-aminobutyric acid type A receptor beta 2 subunit
chr14_-_81638934 Show fit	0.02	ENSRNOT00000018616	Fam193a Links NCBI RGD Ensembl Show fit	family with sequence similarity 193, member A
chr1_+_87248489 Show fit	0.01	ENSRNOT00000028091	Dpf1 Links NCBI RGD Ensembl Show fit	double PHD fingers 1
chr9_+_94879745 Show fit	0.01	ENSRNOT00000080482	Atg16l1 Links NCBI RGD Ensembl Show fit	autophagy related 16-like 1
chr4_+_133286114 Show fit	0.01	ENSRNOT00000084158	Ppp4r2 Links NCBI RGD Ensembl Show fit	protein phosphatase 4, regulatory subunit 2
chr6_+_92229686 Show fit	0.01	ENSRNOT00000046085	Atl1 Links NCBI RGD Ensembl Show fit	atlastin GTPase 1
chr6_+_99402360 Show fit	0.01	ENSRNOT00000078498	Zbtb1 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 1
chr19_+_51317425 Show fit	0.01	ENSRNOT00000019298	Cdh13 Links NCBI RGD Ensembl Show fit	cadherin 13
chr2_-_210550490 Show fit	0.01	ENSRNOT00000081835 ENSRNOT00000025222 ENSRNOT00000086403	Csf1 Links NCBI RGD Ensembl Show fit	colony stimulating factor 1
chr3_-_162872831 Show fit	0.01	ENSRNOT00000008478	Sulf2 Links NCBI RGD Ensembl Show fit	sulfatase 2
chr10_+_15191078 Show fit	0.01	ENSRNOT00000026697	Wdr24 Links NCBI RGD Ensembl Show fit	WD repeat domain 24
chr10_+_16542882 Show fit	0.00	ENSRNOT00000028146	Stc2 Links NCBI RGD Ensembl Show fit	stanniocalcin 2
chrX_+_70438617 Show fit	0.00	ENSRNOT00000076671	Arr3 Links NCBI RGD Ensembl Show fit	arrestin 3
chr5_-_7941822 Show fit	0.00	ENSRNOT00000079917	Prex2 Links NCBI RGD Ensembl Show fit	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
chr1_-_65756528 Show fit	0.00	ENSRNOT00000026298	Zfp110 Links NCBI RGD Ensembl Show fit	zinc finger protein 110
chr10_+_84979717 Show fit	0.00	ENSRNOT00000065555	Mrpl10 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein L10
chr4_-_180234804 Show fit	0.00	ENSRNOT00000070957	Bhlhe41 Links NCBI RGD Ensembl Show fit	basic helix-loop-helix family, member e41
chr1_+_214664537 Show fit	0.00	ENSRNOT00000075002	AABR07006030.1 Links NCBI RGD Ensembl Show fit
chr1_-_265798167 Show fit	0.00	ENSRNOT00000079483	Ldb1 Links NCBI RGD Ensembl Show fit	LIM domain binding 1
chr4_-_123713319 Show fit	0.00	ENSRNOT00000012875 ENSRNOT00000086982	Slc6a6 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 6
chr15_-_84748525 Show fit	0.00	ENSRNOT00000090009	Klf12 Links NCBI RGD Ensembl Show fit	Kruppel-like factor 12
chr12_+_42097626 Show fit	0.00	ENSRNOT00000001893	Tbx5 Links NCBI RGD Ensembl Show fit	T-box 5

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:0010070	zygote asymmetric cell division(GO:0010070)
0.0	0.0	GO:1900625	regulation of mast cell cytokine production(GO:0032763) regulation of monocyte aggregation(GO:1900623) positive regulation of monocyte aggregation(GO:1900625)