GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Zfp282 Links NCBI RGD Ensembl	ENSRNOG00000026981	zinc finger protein 282

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Zfp282	rn6_v1_chr4_+_77554269_77554269	-0.77	1.3e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_-_15301998 Show fit	0.09	ENSRNOT00000016400	Slc35d3 Links NCBI RGD Ensembl Show fit	solute carrier family 35, member D3
chr10_-_90312386 Show fit	0.07	ENSRNOT00000028445	Slc4a1 Links NCBI RGD Ensembl Show fit	solute carrier family 4 member 1
chr2_+_187447501 Show fit	0.06	ENSRNOT00000038589	Iqgap3 Links NCBI RGD Ensembl Show fit	IQ motif containing GTPase activating protein 3
chr10_+_16542882 Show fit	0.04	ENSRNOT00000028146	Stc2 Links NCBI RGD Ensembl Show fit	stanniocalcin 2
chr2_+_190073815 Show fit	0.04	ENSRNOT00000015473	S100a8 Links NCBI RGD Ensembl Show fit	S100 calcium binding protein A8
chr4_-_82399458 Show fit	0.04	ENSRNOT00000072532	AABR07060588.2 Links NCBI RGD Ensembl Show fit
chr16_-_48921242 Show fit	0.04	ENSRNOT00000041596	Cenpu Links NCBI RGD Ensembl Show fit	centromere protein U
chr13_-_88497901 Show fit	0.03	ENSRNOT00000058560	Uap1 Links NCBI RGD Ensembl Show fit	UDP-N-acetylglucosamine pyrophosphorylase 1
chr1_-_154111725 Show fit	0.03	ENSRNOT00000055488	Ccdc81 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 81
chr4_+_30313102 Show fit	0.03	ENSRNOT00000012657	Asb4 Links NCBI RGD Ensembl Show fit	ankyrin repeat and SOCS box-containing 4
chr10_+_14828597 Show fit	0.03	ENSRNOT00000025434	Tekt4 Links NCBI RGD Ensembl Show fit	tektin 4
chr14_-_44375804 Show fit	0.03	ENSRNOT00000042825	LOC100362751 Links NCBI RGD Ensembl Show fit	ribosomal protein P2-like
chr9_+_94721681 Show fit	0.03	ENSRNOT00000022818	Neu2 Links NCBI RGD Ensembl Show fit	neuraminidase 2
chr7_-_61798729 Show fit	0.03	ENSRNOT00000010283	Dyrk2 Links NCBI RGD Ensembl Show fit	dual specificity tyrosine phosphorylation regulated kinase 2
chr1_+_85213652 Show fit	0.03	ENSRNOT00000092044	Nccrp1 Links NCBI RGD Ensembl Show fit	non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)
chr4_+_157416904 Show fit	0.03	ENSRNOT00000059520	AC115420.1 Links NCBI RGD Ensembl Show fit
chr19_+_25946979 Show fit	0.03	ENSRNOT00000004027	Gadd45gip1 Links NCBI RGD Ensembl Show fit	GADD45G interacting protein 1
chr15_+_12570062 Show fit	0.02	ENSRNOT00000010675	Thoc7 Links NCBI RGD Ensembl Show fit	THO complex 7
chr15_+_104186792 Show fit	0.02	ENSRNOT00000014182	Dnajc3 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member C3
chr8_+_118926478 Show fit	0.02	ENSRNOT00000028426	Ccdc12 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 12
chr4_+_118167294 Show fit	0.02	ENSRNOT00000022367	LOC687679 Links NCBI RGD Ensembl Show fit	similar to small nuclear ribonucleoprotein polypeptide G
chr5_+_79367663 Show fit	0.02	ENSRNOT00000011508	Atp6v1g1 Links NCBI RGD Ensembl Show fit	ATPase H+ transporting V1 subunit G1
chr1_+_86948918 Show fit	0.02	ENSRNOT00000084839	Sirt2 Links NCBI RGD Ensembl Show fit	sirtuin 2
chr8_+_117694605 Show fit	0.02	ENSRNOT00000027994	Col7a1 Links NCBI RGD Ensembl Show fit	collagen type VII alpha 1 chain
chr14_+_113968563 Show fit	0.02	ENSRNOT00000006085	Clhc1 Links NCBI RGD Ensembl Show fit	clathrin heavy chain linker domain containing 1
chr8_-_68312909 Show fit	0.02	ENSRNOT00000066106	RGD1309779 Links NCBI RGD Ensembl Show fit	similar to ENSANGP00000021391
chr1_+_247110216 Show fit	0.02	ENSRNOT00000016000	Cdc37l1 Links NCBI RGD Ensembl Show fit	cell division cycle 37-like 1
chr1_-_86948845 Show fit	0.02	ENSRNOT00000027212	Nfkbib Links NCBI RGD Ensembl Show fit	NFKB inhibitor beta
chr16_+_5082239 Show fit	0.02	ENSRNOT00000074596	LOC102547963 Links NCBI RGD Ensembl Show fit	leucine-rich repeat and transmembrane domain-containing protein 1-like
chr7_-_70480724 Show fit	0.02	ENSRNOT00000090057	Dtx3 Links NCBI RGD Ensembl Show fit	deltex E3 ubiquitin ligase 3
chr16_+_4997461 Show fit	0.02	ENSRNOT00000071042	LOC102547963 Links NCBI RGD Ensembl Show fit	leucine-rich repeat and transmembrane domain-containing protein 1-like
chr14_+_44524753 Show fit	0.01	ENSRNOT00000076245	Rpl9 Links NCBI RGD Ensembl Show fit	ribosomal protein L9
chr14_+_44524416 Show fit	0.01	ENSRNOT00000038927	Rpl9 Links NCBI RGD Ensembl Show fit	ribosomal protein L9
chr2_+_240527130 Show fit	0.01	ENSRNOT00000031348	Slc9b1 Links NCBI RGD Ensembl Show fit	solute carrier family 9 member B1
chr13_-_89545182 Show fit	0.01	ENSRNOT00000078402	Pcp4l1 Links NCBI RGD Ensembl Show fit	Purkinje cell protein 4-like 1
chr1_-_102970950 Show fit	0.01	ENSRNOT00000018194	Tsg101 Links NCBI RGD Ensembl Show fit	tumor susceptibility 101
chr3_-_151224123 Show fit	0.01	ENSRNOT00000026091	Trpc4ap Links NCBI RGD Ensembl Show fit	transient receptor potential cation channel, subfamily C, member 4 associated protein
chr15_+_57290849 Show fit	0.01	ENSRNOT00000014909	Cpb2 Links NCBI RGD Ensembl Show fit	carboxypeptidase B2
chr20_-_3397039 Show fit	0.01	ENSRNOT00000001084 ENSRNOT00000085259	Ppp1r18 Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 18
chr15_-_34693034 Show fit	0.01	ENSRNOT00000083314	Mcpt8 Links NCBI RGD Ensembl Show fit	mast cell protease 8
chr8_-_90664554 Show fit	0.01	ENSRNOT00000039917 ENSRNOT00000074896 ENSRNOT00000072225	Hmgn3 Links NCBI RGD Ensembl Show fit	high mobility group nucleosomal binding domain 3
chr17_-_34945317 Show fit	0.01	ENSRNOT00000090457	Vma21 Links NCBI RGD Ensembl Show fit	VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chr2_-_165641573 Show fit	0.01	ENSRNOT00000013987	Trim59 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 59
chr14_-_44524252 Show fit	0.01	ENSRNOT00000003779	Lias Links NCBI RGD Ensembl Show fit	lipoic acid synthetase
chr8_-_53816447 Show fit	0.01	ENSRNOT00000011454	Ttc12 Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 12
chr6_-_21880003 Show fit	0.01	ENSRNOT00000006505	Ttc27 Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 27
chr18_+_40962146 Show fit	0.01	ENSRNOT00000035656	Arl14epl Links NCBI RGD Ensembl Show fit	ADP ribosylation factor like GTPase 14 effector protein like
chrX_+_78042859 Show fit	0.01	ENSRNOT00000003286	Lpar4 Links NCBI RGD Ensembl Show fit	lysophosphatidic acid receptor 4
chr14_-_84662143 Show fit	0.01	ENSRNOT00000057529 ENSRNOT00000080078	Hormad2 Links NCBI RGD Ensembl Show fit	HORMA domain containing 2
chr3_+_122836446 Show fit	0.01	ENSRNOT00000028816	Ebf4 Links NCBI RGD Ensembl Show fit	early B-cell factor 4
chr5_+_28395296 Show fit	0.01	ENSRNOT00000009375	Tmem55a Links NCBI RGD Ensembl Show fit	transmembrane protein 55A
chr9_+_4269160 Show fit	0.01	ENSRNOT00000050420	Sult1c2 Links NCBI RGD Ensembl Show fit	sulfotransferase family 1C member 2
chr8_+_50563047 Show fit	0.00	ENSRNOT00000025149	Zfp259 Links NCBI RGD Ensembl Show fit	zinc finger protein 259
chr3_+_139894331 Show fit	0.00	ENSRNOT00000064695	Rin2 Links NCBI RGD Ensembl Show fit	Ras and Rab interactor 2
chr1_+_257157264 Show fit	0.00	ENSRNOT00000067149 ENSRNOT00000079219	Plce1 Links NCBI RGD Ensembl Show fit	phospholipase C, epsilon 1
chr16_-_61091169 Show fit	0.00	ENSRNOT00000016328	Dusp4 Links NCBI RGD Ensembl Show fit	dual specificity phosphatase 4
chr20_+_29558689 Show fit	0.00	ENSRNOT00000085229	Ascc1 Links NCBI RGD Ensembl Show fit	activating signal cointegrator 1 complex subunit 1
chr3_+_121235119 Show fit	0.00	ENSRNOT00000023419	Mertk Links NCBI RGD Ensembl Show fit	MER proto-oncogene, tyrosine kinase
chr17_-_5463158 Show fit	0.00	ENSRNOT00000090032	Naa35 Links NCBI RGD Ensembl Show fit	N(alpha)-acetyltransferase 35, NatC auxiliary subunit
chr1_+_247228061 Show fit	0.00	ENSRNOT00000020809	Rcl1 Links NCBI RGD Ensembl Show fit	RNA terminal phosphate cyclase-like 1
chrX_+_37329779 Show fit	0.00	ENSRNOT00000038352 ENSRNOT00000088802	Pdha1 Links NCBI RGD Ensembl Show fit	pyruvate dehydrogenase (lipoamide) alpha 1
chrX_-_88321834 Show fit	0.00	ENSRNOT00000020364	LOC100909548 Links NCBI RGD Ensembl Show fit	cation-dependent mannose-6-phosphate receptor-like
chrX_-_114658931 Show fit	0.00	ENSRNOT00000006008	Chrdl1 Links NCBI RGD Ensembl Show fit	chordin-like 1
chr7_-_116063078 Show fit	0.00	ENSRNOT00000076932 ENSRNOT00000035496	Gml Links NCBI RGD Ensembl Show fit	glycosylphosphatidylinositol anchored molecule like

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0010037	response to carbon dioxide(GO:0010037)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0032027	myosin light chain binding(GO:0032027)