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GSE49485: Hypoxia transcriptome sequencing of rat brain.
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Results for Zfp219_Zfp740
Z-value: 0.61
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Transcription factors associated with Zfp219_Zfp740
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Zfp219 | rn6_v1_chr15_-_28406046_28406046 | 0.68 | 2.1e-01 | Click! |
| Znf740 | rn6_v1_chr7_+_143810892_143810892 | 0.59 | 2.9e-01 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr19_+_20607507 Show fit | 0.51 |
ENSRNOT00000000011
|
cerebellin 1 precursor |
|
| chr8_-_98738446 Show fit | 0.34 |
ENSRNOT00000019860
|
Zic family member 1 |
|
| chr2_-_188718704 Show fit | 0.26 |
ENSRNOT00000028010
|
zinc finger and BTB domain containing 7B |
|
| chr20_-_5064469 Show fit | 0.23 |
ENSRNOT00000001120
|
lymphocyte antigen 6 complex, locus G6D |
|
| chr10_+_84152152 Show fit | 0.20 |
ENSRNOT00000010724
|
homeo box B5 |
|
| chr6_-_146195819 Show fit | 0.18 |
ENSRNOT00000007625
|
Sp4 transcription factor |
|
| chr12_-_9331195 Show fit | 0.17 |
ENSRNOT00000044134
|
PAN3 poly(A) specific ribonuclease subunit |
|
| chr2_+_195996521 Show fit | 0.17 |
ENSRNOT00000082849
|
pogo transposable element with ZNF domain |
|
| chr1_+_226435979 Show fit | 0.16 |
ENSRNOT00000048704
ENSRNOT00000036232 ENSRNOT00000035576 ENSRNOT00000036180 ENSRNOT00000036168 ENSRNOT00000047964 ENSRNOT00000036283 ENSRNOT00000007429 |
synaptotagmin 7 |
|
| chr3_+_134413170 Show fit | 0.15 |
ENSRNOT00000074338
|
|
Network of associatons between targets according to the STRING database.
First level regulatory network of Zfp219_Zfp740
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.5 | GO:0021707 | cerebellar granular layer formation(GO:0021684) cerebellar granule cell differentiation(GO:0021707) |
| 0.0 | 0.3 | GO:2001185 | regulation of CD8-positive, alpha-beta T cell activation(GO:2001185) |
| 0.1 | 0.2 | GO:1990926 | short-term synaptic potentiation(GO:1990926) |
| 0.0 | 0.2 | GO:0010606 | positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606) |
| 0.0 | 0.2 | GO:2000786 | positive regulation of autophagosome assembly(GO:2000786) |
| 0.0 | 0.1 | GO:0032915 | positive regulation of transforming growth factor beta2 production(GO:0032915) |
| 0.0 | 0.1 | GO:0043314 | negative regulation of neutrophil degranulation(GO:0043314) |
| 0.0 | 0.1 | GO:0001966 | thigmotaxis(GO:0001966) |
| 0.0 | 0.1 | GO:1902630 | regulation of membrane hyperpolarization(GO:1902630) |
| 0.0 | 0.1 | GO:1901491 | negative regulation of lymphangiogenesis(GO:1901491) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0032009 | early phagosome(GO:0032009) |
| 0.0 | 0.1 | GO:0002944 | cyclin K-CDK12 complex(GO:0002944) |
| 0.0 | 0.1 | GO:0060187 | cell pole(GO:0060187) |
| 0.0 | 0.1 | GO:0016281 | eukaryotic translation initiation factor 4F complex(GO:0016281) |
| 0.0 | 0.1 | GO:0030015 | CCR4-NOT core complex(GO:0030015) |
| 0.0 | 0.1 | GO:0044300 | cerebellar mossy fiber(GO:0044300) |
| 0.0 | 0.1 | GO:0008091 | spectrin(GO:0008091) |
| 0.0 | 0.1 | GO:0097512 | cardiac myofibril(GO:0097512) |
| 0.0 | 0.0 | GO:0035363 | histone locus body(GO:0035363) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:0008140 | cAMP response element binding protein binding(GO:0008140) |
| 0.1 | 0.2 | GO:0016309 | 1-phosphatidylinositol-5-phosphate 4-kinase activity(GO:0016309) |
| 0.0 | 0.2 | GO:0004535 | poly(A)-specific ribonuclease activity(GO:0004535) |
| 0.0 | 0.1 | GO:0015467 | G-protein activated inward rectifier potassium channel activity(GO:0015467) |
| 0.0 | 0.1 | GO:0051864 | histone demethylase activity (H3-K36 specific)(GO:0051864) |
| 0.0 | 0.1 | GO:0043533 | inositol 1,3,4,5 tetrakisphosphate binding(GO:0043533) |
| 0.0 | 0.1 | GO:0005024 | transforming growth factor beta-activated receptor activity(GO:0005024) |
| 0.0 | 0.1 | GO:0031697 | beta-1 adrenergic receptor binding(GO:0031697) |
| 0.0 | 0.1 | GO:0030550 | acetylcholine receptor inhibitor activity(GO:0030550) |
| 0.0 | 0.0 | GO:0004307 | ethanolaminephosphotransferase activity(GO:0004307) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | PID ALK2 PATHWAY | ALK2 signaling events |