GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Zfp128 Links NCBI RGD Ensembl	ENSRNOG00000031113	zinc finger protein 128
Zfp128 Links NCBI RGD Ensembl	ENSRNOG00000031459	zinc finger protein 128

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Zfp128	rn6_v1_chr1_-_65701867_65701867	0.24	7.0e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr2_-_23256158 Show fit	0.09	ENSRNOT00000015336	Bhmt Links NCBI RGD Ensembl Show fit	betaine-homocysteine S-methyltransferase
chr10_+_14136883 Show fit	0.07	ENSRNOT00000082295	AC115181.1 Links NCBI RGD Ensembl Show fit
chr4_-_150616895 Show fit	0.05	ENSRNOT00000073562	Ankrd26 Links NCBI RGD Ensembl Show fit	ankyrin repeat domain 26
chr20_-_31598118 Show fit	0.05	ENSRNOT00000046537	Col13a1 Links NCBI RGD Ensembl Show fit	collagen type XIII alpha 1 chain
chr5_+_160355833 Show fit	0.04	ENSRNOT00000080721 ENSRNOT00000088523 ENSRNOT00000017972	Casp9 Links NCBI RGD Ensembl Show fit	caspase 9
chr1_-_170186462 Show fit	0.04	ENSRNOT00000035798	Olr202 Links NCBI RGD Ensembl Show fit	olfactory receptor 202
chr7_-_138039984 Show fit	0.03	ENSRNOT00000089806	Slc38a1 Links NCBI RGD Ensembl Show fit	solute carrier family 38, member 1
chr5_+_144581427 Show fit	0.03	ENSRNOT00000015227	Clspn Links NCBI RGD Ensembl Show fit	claspin
chr20_-_31597830 Show fit	0.03	ENSRNOT00000085877	Col13a1 Links NCBI RGD Ensembl Show fit	collagen type XIII alpha 1 chain
chr3_-_177089199 Show fit	0.02	ENSRNOT00000020873	Zfp512b Links NCBI RGD Ensembl Show fit	zinc finger protein 512B
chr10_+_102136283 Show fit	0.02	ENSRNOT00000003735	Sstr2 Links NCBI RGD Ensembl Show fit	somatostatin receptor 2
chr6_+_18877907 Show fit	0.02	ENSRNOT00000084222	Alkbh8 Links NCBI RGD Ensembl Show fit	alkB homolog 8, tRNA methyltransferase
chr20_-_13581164 Show fit	0.02	ENSRNOT00000033298	Zfp280b Links NCBI RGD Ensembl Show fit	zinc finger protein 280B
chr8_-_62215293 Show fit	0.02	ENSRNOT00000080448	NEWGENE_1306267 Links NCBI RGD Ensembl Show fit	phosphopantothenoylcysteine decarboxylase
chr5_+_155934490 Show fit	0.02	ENSRNOT00000077933	LOC100911993 Links NCBI RGD Ensembl Show fit	ubiquitin carboxyl-terminal hydrolase 48-like
chr8_-_64154396 Show fit	0.02	ENSRNOT00000031262	Bbs4 Links NCBI RGD Ensembl Show fit	Bardet-Biedl syndrome 4
chr5_-_147867583 Show fit	0.01	ENSRNOT00000000139	Kpna6 Links NCBI RGD Ensembl Show fit	karyopherin subunit alpha 6
chr2_+_147006830 Show fit	0.01	ENSRNOT00000080780	AABR07010672.1 Links NCBI RGD Ensembl Show fit
chr2_-_210839295 Show fit	0.01	ENSRNOT00000025994	Gstm4 Links NCBI RGD Ensembl Show fit	glutathione S-transferase mu 4
chr12_-_51341663 Show fit	0.01	ENSRNOT00000066892 ENSRNOT00000052202	Pitpnb Links NCBI RGD Ensembl Show fit	phosphatidylinositol transfer protein, beta
chr11_-_45124423 Show fit	0.01	ENSRNOT00000046383	Filip1l Links NCBI RGD Ensembl Show fit	filamin A interacting protein 1-like
chr3_-_8690305 Show fit	0.01	ENSRNOT00000035002	Zer1 Links NCBI RGD Ensembl Show fit	zyg-11 related, cell cycle regulator
chr1_+_162320730 Show fit	0.01	ENSRNOT00000035743	Kctd21 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 21
chr9_+_98279022 Show fit	0.01	ENSRNOT00000038536	Rbm44 Links NCBI RGD Ensembl Show fit	RNA binding motif protein 44
chr7_-_22943159 Show fit	0.01	ENSRNOT00000047547	Vom2r57 Links NCBI RGD Ensembl Show fit	vomeronasal 2 receptor, 57
chr18_+_41022552 Show fit	0.01	ENSRNOT00000005260	Commd10 Links NCBI RGD Ensembl Show fit	COMM domain containing 10
chr7_-_19088972 Show fit	0.01	ENSRNOT00000049266	Vom2r57 Links NCBI RGD Ensembl Show fit	vomeronasal 2 receptor, 57
chr8_-_21384131 Show fit	0.01	ENSRNOT00000071010	Zfp560 Links NCBI RGD Ensembl Show fit	zinc finger protein 560
chrX_+_43626480 Show fit	0.01	ENSRNOT00000068078	Sat1 Links NCBI RGD Ensembl Show fit	spermidine/spermine N1-acetyl transferase 1
chr11_+_31539016 Show fit	0.01	ENSRNOT00000072856	Ifnar2 Links NCBI RGD Ensembl Show fit	interferon alpha and beta receptor subunit 2
chr15_-_34364081 Show fit	0.01	ENSRNOT00000027362	Tinf2 Links NCBI RGD Ensembl Show fit	TERF1 interacting nuclear factor 2
chr8_+_13305152 Show fit	0.01	ENSRNOT00000012940	Mre11a Links NCBI RGD Ensembl Show fit	MRE11 homolog A, double strand break repair nuclease
chr6_-_128989812 Show fit	0.01	ENSRNOT00000085943	LOC100909439 Links NCBI RGD Ensembl Show fit	ankyrin repeat and SOCS box protein 2-like
chr10_+_11240138 Show fit	0.01	ENSRNOT00000048687	Srl Links NCBI RGD Ensembl Show fit	sarcalumenin
chr6_-_9459188 Show fit	0.01	ENSRNOT00000019894	Srbd1 Links NCBI RGD Ensembl Show fit	S1 RNA binding domain 1
chr14_+_2892753 Show fit	0.01	ENSRNOT00000061630	Evi5 Links NCBI RGD Ensembl Show fit	ecotropic viral integration site 5
chr18_+_69549937 Show fit	0.01	ENSRNOT00000041227	Mex3c Links NCBI RGD Ensembl Show fit	mex-3 RNA binding family member C
chr3_+_62648447 Show fit	0.01	ENSRNOT00000002111	Agps Links NCBI RGD Ensembl Show fit	alkylglycerone phosphate synthase
chr8_-_129371973 Show fit	0.01	ENSRNOT00000042614	Snrpe Links NCBI RGD Ensembl Show fit	small nuclear ribonucleoprotein polypeptide E
chr4_+_99398494 Show fit	0.01	ENSRNOT00000064374	Rnf103 Links NCBI RGD Ensembl Show fit	ring finger protein 103
chr20_-_43108198 Show fit	0.00	ENSRNOT00000000742	Hdac2 Links NCBI RGD Ensembl Show fit	histone deacetylase 2
chr10_+_110631494 Show fit	0.00	ENSRNOT00000054915	Fn3k Links NCBI RGD Ensembl Show fit	fructosamine 3 kinase
chr3_-_171893901 Show fit	0.00	ENSRNOT00000091966	Apcdd1l Links NCBI RGD Ensembl Show fit	APC down-regulated 1 like
chr12_+_16030788 Show fit	0.00	ENSRNOT00000051565	Iqce Links NCBI RGD Ensembl Show fit	IQ motif containing E
chr5_+_151692108 Show fit	0.00	ENSRNOT00000086144	Fam46b Links NCBI RGD Ensembl Show fit	family with sequence similarity 46, member B
chr1_-_102845083 Show fit	0.00	ENSRNOT00000082289	Saa4 Links NCBI RGD Ensembl Show fit	serum amyloid A4
chr1_-_170471076 Show fit	0.00	ENSRNOT00000025159	Arfip2 Links NCBI RGD Ensembl Show fit	ADP-ribosylation factor interacting protein 2
chr8_-_23014499 Show fit	0.00	ENSRNOT00000017820	Ccdc151 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 151
chr8_-_111107599 Show fit	0.00	ENSRNOT00000031313	Cep63 Links NCBI RGD Ensembl Show fit	centrosomal protein 63

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0006579	amino-acid betaine catabolic process(GO:0006579)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0008172	S-methyltransferase activity(GO:0008172)