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GSE49485: Hypoxia transcriptome sequencing of rat brain.

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Results for Xbp1_Creb3l1

Z-value: 0.38

Motif logo

Transcription factors associated with Xbp1_Creb3l1

Gene Symbol Gene ID Gene Info
ENSRNOG00000010298 X-box binding protein 1
ENSRNOG00000005413 cAMP responsive element binding protein 3-like 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Creb3l1rn6_v1_chr3_-_80933283_809332830.741.5e-01Click!
Xbp1rn6_v1_chr14_+_85753760_85753760-0.197.5e-01Click!

Activity profile of Xbp1_Creb3l1 motif

Sorted Z-values of Xbp1_Creb3l1 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr12_-_41671437 0.28 ENSRNOT00000001883
LIM homeobox 5
chr17_+_6909728 0.21 ENSRNOT00000061231
hypothetical protein LOC681410
chr8_-_98738446 0.20 ENSRNOT00000019860
Zic family member 1
chr1_-_190965115 0.14 ENSRNOT00000023483

chr1_+_105284753 0.12 ENSRNOT00000041950
solute carrier family 6 member 5
chr14_+_11198896 0.12 ENSRNOT00000079767
heterogeneous nuclear ribonucleoprotein D-like
chr18_+_73157973 0.10 ENSRNOT00000031993
SKI family transcriptional corepressor 2
chr14_+_83752393 0.10 ENSRNOT00000081123
selenoprotein M
chr3_+_14889510 0.09 ENSRNOT00000080760
DAB2 interacting protein
chr1_+_199941161 0.09 ENSRNOT00000027616
Bcl2-associated athanogene 3
chr10_-_56558487 0.09 ENSRNOT00000023256
solute carrier family 2 member 4
chr4_-_84768249 0.09 ENSRNOT00000013205
FK506 binding protein 14
chr10_-_105149971 0.08 ENSRNOT00000012436
signal recognition particle 68
chr1_+_221644867 0.08 ENSRNOT00000054830
EH-domain containing 1
chr12_+_24473981 0.08 ENSRNOT00000001973
frizzled class receptor 9
chr14_+_11199404 0.07 ENSRNOT00000003106
heterogeneous nuclear ribonucleoprotein D-like
chr7_-_117978787 0.06 ENSRNOT00000074262
zinc finger protein 647
chr11_+_64601029 0.06 ENSRNOT00000004138
Rho GTPase activating protein 31
chr18_-_47513030 0.06 ENSRNOT00000083881
ENSRNOT00000074226
lysyl oxidase
chr19_-_37938857 0.06 ENSRNOT00000026730
solute carrier family 12 member 4
chr18_+_52423883 0.06 ENSRNOT00000022017
proline-rich coiled-coil 1
chr4_+_118852062 0.05 ENSRNOT00000090827
ENSRNOT00000025070
glutamine fructose-6-phosphate transaminase 1
chr4_-_82258765 0.05 ENSRNOT00000008523
homeo box A5
chr1_-_101086198 0.05 ENSRNOT00000027917
reticulocalbin 3
chr4_+_56625561 0.05 ENSRNOT00000008356
ENSRNOT00000090808
ENSRNOT00000008972
calumenin
chr1_-_81144024 0.05 ENSRNOT00000088431
zinc finger protein 94
chr16_+_20873642 0.04 ENSRNOT00000004891
DEAD-box helicase 49
chr17_+_26925828 0.04 ENSRNOT00000018310
thioredoxin domain containing 5
chr5_+_167952728 0.04 ENSRNOT00000085315
ERBB receptor feedback inhibitor 1
chr1_-_101085884 0.04 ENSRNOT00000085352
reticulocalbin 3
chr3_-_10269693 0.04 ENSRNOT00000021871
far upstream element binding protein 3
chr7_-_114305896 0.04 ENSRNOT00000067327
ENSRNOT00000038172
trafficking protein particle complex 9
chr11_+_80255790 0.04 ENSRNOT00000002522
B-cell CLL/lymphoma 6
chr15_-_4057104 0.04 ENSRNOT00000084350
ENSRNOT00000012270
SEC24 homolog C, COPII coat complex component
chr9_-_82699551 0.04 ENSRNOT00000020673
obscurin-like 1
chrX_+_156999826 0.03 ENSRNOT00000081819
isocitrate dehydrogenase 3 (NAD), gamma
chr4_+_342302 0.03 ENSRNOT00000009233
insulin induced gene 1
chr2_+_198823366 0.03 ENSRNOT00000083769
ENSRNOT00000028814
protein inhibitor of activated STAT, 3
chr11_-_64752544 0.03 ENSRNOT00000048738
transmembrane protein 39a
chr5_+_59063531 0.03 ENSRNOT00000085311
ENSRNOT00000065909
cAMP responsive element binding protein 3
chr3_+_146582752 0.03 ENSRNOT00000010157
glycogen phosphorylase B
chr2_-_183582553 0.03 ENSRNOT00000014236
ADP-ribosylation factor interacting protein 1
chr17_+_27496353 0.03 ENSRNOT00000077994
ENSRNOT00000019040
ENSRNOT00000089736
signal sequence receptor subunit 1
chr1_-_226255886 0.03 ENSRNOT00000027842
flap structure-specific endonuclease 1
chr11_+_46009322 0.03 ENSRNOT00000002233
transmembrane protein 45A
chr9_-_100592271 0.03 ENSRNOT00000086433
high density lipoprotein binding protein
chr4_+_55772377 0.03 ENSRNOT00000047698
staphylococcal nuclease and tudor domain containing 1
chr3_-_151224123 0.03 ENSRNOT00000026091
transient receptor potential cation channel, subfamily C, member 4 associated protein
chr10_-_84789832 0.03 ENSRNOT00000071719
CDK5 regulatory subunit associated protein 3
chr3_+_160945359 0.03 ENSRNOT00000019761
phosphatidylinositol glycan anchor biosynthesis, class T
chr1_+_123015746 0.03 ENSRNOT00000013483
MAGE family member L2
chr7_-_97759852 0.03 ENSRNOT00000007484
derlin 1
chr11_-_51202703 0.03 ENSRNOT00000002719
ENSRNOT00000077220
Cbl proto-oncogene B
chr20_-_3822754 0.03 ENSRNOT00000000541
ENSRNOT00000077357
solute carrier family 39 member 7
chr3_-_138116664 0.03 ENSRNOT00000055602
ribosome binding protein 1
chr9_-_61810417 0.02 ENSRNOT00000020910
raftlin family member 2
chr7_-_60742660 0.02 ENSRNOT00000086116
MDM2 proto-oncogene
chr7_+_117951154 0.02 ENSRNOT00000060181
zinc finger protein 7
chr12_-_13210758 0.02 ENSRNOT00000001438
KDEL endoplasmic reticulum protein retention receptor 2
chr17_-_1830001 0.02 ENSRNOT00000066230
AhpC/TSA antioxidant enzyme domain containing 1
chr5_-_59063592 0.02 ENSRNOT00000022400
talin 1
chr16_-_20873344 0.02 ENSRNOT00000027381
coatomer protein complex, subunit epsilon
chr18_-_24182012 0.02 ENSRNOT00000023594
synaptotagmin 4
chr3_+_11317183 0.02 ENSRNOT00000091171
ENSRNOT00000016341
golgin A2
chr1_-_216750844 0.02 ENSRNOT00000054862
nucleosome assembly protein 1-like 4
chrX_+_9815652 0.02 ENSRNOT00000091382
peripheral plasma membrane protein CASK-like
chr17_-_20364714 0.02 ENSRNOT00000070962
jumonji and AT-rich interaction domain containing 2
chr10_-_105228547 0.02 ENSRNOT00000028875
signal recognition particle 68
chr2_+_227455722 0.02 ENSRNOT00000064809
SEC24 homolog D, COPII coat complex component
chr9_+_100080144 0.01 ENSRNOT00000071411
arginyl aminopeptidase like 1
chr7_+_29282305 0.01 ENSRNOT00000007623
ADP-ribosylation factor like GTPase 1
chr8_-_39243882 0.01 ENSRNOT00000082086
STT3A, catalytic subunit of the oligosaccharyltransferase complex
chr10_+_38877422 0.01 ENSRNOT00000065229
ENSRNOT00000083162
septin 8
chr18_+_1504178 0.01 ENSRNOT00000048198
ribosomal protein L36a-like
chr7_-_11406771 0.01 ENSRNOT00000047450
eukaryotic translation elongation factor 2
chr5_-_59025631 0.01 ENSRNOT00000049000
ENSRNOT00000022801
tropomyosin 2, beta
chr1_-_87174530 0.01 ENSRNOT00000089578
potassium two pore domain channel subfamily K member 6
chr1_-_220067123 0.01 ENSRNOT00000071020
ENSRNOT00000072373
RNA binding motif protein 14
chr8_-_21458379 0.01 ENSRNOT00000038084
zinc finger protein 26
chr5_+_48274477 0.01 ENSRNOT00000075992
ENSRNOT00000041271
ubiquitin-conjugating enzyme E2, J1
chr8_-_49075892 0.01 ENSRNOT00000082687
archain 1
chr1_-_221448570 0.01 ENSRNOT00000075165
zinc finger protein-like 1
chr20_+_31298269 0.01 ENSRNOT00000000673
pyrophosphatase (inorganic) 1
chr1_-_226152524 0.01 ENSRNOT00000027756
fatty acid desaturase 2
chr1_+_221448661 0.01 ENSRNOT00000072493
sororin-like
chr2_+_124149872 0.01 ENSRNOT00000023584
spermatogenesis associated 5
chr6_+_38474804 0.01 ENSRNOT00000009779
neuroblastoma amplified sequence
chr3_-_66394764 0.01 ENSRNOT00000075832
ceramide kinase-like
chr12_-_37480297 0.01 ENSRNOT00000001397
transmembrane p24 trafficking protein 2
chr18_+_73226630 0.01 ENSRNOT00000051857
haloacid dehalogenase-like hydrolase domain containing 2
chr3_-_113091770 0.01 ENSRNOT00000068132
leucine carboxyl methyltransferase 2
chr2_-_2891253 0.01 ENSRNOT00000029250
arylsulfatase family, member K
chr4_+_119997268 0.01 ENSRNOT00000073429
ribophorin I
chr7_-_11444786 0.01 ENSRNOT00000027323
zinc finger and BTB domain containing 7a
chr13_+_90467265 0.01 ENSRNOT00000008518
coatomer protein complex subunit alpha
chr17_+_30965942 0.01 ENSRNOT00000060143
PX domain containing 1
chr1_+_199360645 0.01 ENSRNOT00000026527
lysine acetyltransferase 8
chr1_+_80087684 0.01 ENSRNOT00000041215
echinoderm microtubule associated protein like 2
chr3_-_79892429 0.01 ENSRNOT00000016191
solute carrier family 39 member 13
chr7_-_59547174 0.01 ENSRNOT00000085836
CCR4-NOT transcription complex, subunit 2
chr9_-_82673898 0.01 ENSRNOT00000027165
chondroitin polymerizing factor
chr2_+_9526209 0.01 ENSRNOT00000021818
LysM domain containing 3
chr12_-_52558606 0.01 ENSRNOT00000056656
golgin A3
chr5_-_39650894 0.01 ENSRNOT00000010421
ENSRNOT00000089522
Ufm1-specific ligase 1
chr1_-_87174821 0.01 ENSRNOT00000027974
potassium two pore domain channel subfamily K member 6
chrX_+_73390903 0.01 ENSRNOT00000077002
zinc finger protein 449
chr6_+_134958854 0.01 ENSRNOT00000073950
ENSRNOT00000009377
dynein cytoplasmic 1 heavy chain 1
chr7_-_27136652 0.01 ENSRNOT00000086905
host cell factor C2
chr5_+_62109328 0.01 ENSRNOT00000012260
N-acetylneuraminate synthase
chr19_-_38120578 0.01 ENSRNOT00000026873
epithelial splicing regulatory protein 2
chr1_-_260517323 0.01 ENSRNOT00000018043
transmembrane 9 superfamily member 3
chr10_+_48569555 0.01 ENSRNOT00000003966
adenosine A2B receptor
chr8_+_112594691 0.01 ENSRNOT00000038383
ENSRNOT00000081281
acyl-CoA dehydrogenase family, member 11
chr3_+_59981959 0.01 ENSRNOT00000030460
Sp9 transcription factor
chr1_+_225096598 0.01 ENSRNOT00000035650
glucosidase II alpha subunit
chr13_-_90467235 0.01 ENSRNOT00000081534
ENSRNOT00000008150
nicastrin
chr1_-_78851719 0.00 ENSRNOT00000022603
calmodulin 2
chr4_-_120467932 0.00 ENSRNOT00000018454
Sec61 translocon alpha 1 subunit
chr8_-_22111863 0.00 ENSRNOT00000046983
ribonucleoprotein, PTB-binding 1
chr20_+_3823042 0.00 ENSRNOT00000041613
retinoid X receptor beta
chr19_-_49448072 0.00 ENSRNOT00000014997
C-x(9)-C motif containing 2
chr9_+_82674202 0.00 ENSRNOT00000027208
transmembrane protein 198
chr4_-_145699577 0.00 ENSRNOT00000014377
SEC13 homolog, nuclear pore and COPII coat complex component
chr6_+_91476698 0.00 ENSRNOT00000005608
mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
chr14_-_34528262 0.00 ENSRNOT00000003010
transmembrane protein 165
chr7_+_31784438 0.00 ENSRNOT00000010914
ENSRNOT00000010929
IKBKB interacting protein
chr3_+_95232166 0.00 ENSRNOT00000017952
hypothetical protein LOC691083
chr11_+_46714355 0.00 ENSRNOT00000073404
transmembrane protein 45A-like
chr8_-_13109487 0.00 ENSRNOT00000061616
angiomotin-like 1
chrX_-_156999650 0.00 ENSRNOT00000083557
signal sequence receptor subunit 4
chr20_+_46250363 0.00 ENSRNOT00000076522
ENSRNOT00000000334
CD164 molecule
chr7_+_24939498 0.00 ENSRNOT00000010601
cytoskeleton-associated protein 4
chr15_-_57805184 0.00 ENSRNOT00000000168
component of oligomeric golgi complex 3
chr12_+_47218969 0.00 ENSRNOT00000081343
ENSRNOT00000038395
unc-119 lipid binding chaperone B
chr18_+_27114822 0.00 ENSRNOT00000027418
signal recognition particle 19

Network of associatons between targets according to the STRING database.

First level regulatory network of Xbp1_Creb3l1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 GO:0021937 cerebellar Purkinje cell-granule cell precursor cell signaling involved in regulation of granule cell precursor cell proliferation(GO:0021937)
0.0 0.1 GO:2001137 positive regulation of endocytic recycling(GO:2001137)
0.0 0.1 GO:0036233 glycine import(GO:0036233)
0.0 0.1 GO:0036324 vascular endothelial growth factor receptor-2 signaling pathway(GO:0036324)
0.0 0.1 GO:1990523 bone regeneration(GO:1990523)
0.0 0.1 GO:0060764 cell-cell signaling involved in mammary gland development(GO:0060764)
0.0 0.2 GO:0070935 3'-UTR-mediated mRNA stabilization(GO:0070935)
0.0 0.1 GO:0021936 regulation of cerebellar granule cell precursor proliferation(GO:0021936)
0.0 0.1 GO:1901073 glucosamine-containing compound biosynthetic process(GO:1901073)
0.0 0.1 GO:0035934 corticosterone secretion(GO:0035934)
0.0 0.0 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990)
0.0 0.0 GO:1903243 negative regulation of tumor necrosis factor biosynthetic process(GO:0042536) negative regulation of cardiac muscle hypertrophy in response to stress(GO:1903243)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:1990032 parallel fiber(GO:1990032)
0.0 0.1 GO:0031095 platelet dense tubular network membrane(GO:0031095)
0.0 0.1 GO:0033018 sarcoplasmic reticulum lumen(GO:0033018)
0.0 0.1 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 0.0 GO:0045242 mitochondrial isocitrate dehydrogenase complex (NAD+)(GO:0005962) isocitrate dehydrogenase complex (NAD+)(GO:0045242)
0.0 0.0 GO:0032937 SREBP-SCAP-Insig complex(GO:0032937)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0005294 neutral L-amino acid secondary active transmembrane transporter activity(GO:0005294)
0.0 0.1 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.0 0.2 GO:0034046 poly(G) binding(GO:0034046)
0.0 0.1 GO:0070548 L-glutamine aminotransferase activity(GO:0070548)
0.0 0.1 GO:0035662 Toll-like receptor 4 binding(GO:0035662)
0.0 0.1 GO:0004720 protein-lysine 6-oxidase activity(GO:0004720)
0.0 0.0 GO:0008184 glycogen phosphorylase activity(GO:0008184)