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GSE49485: Hypoxia transcriptome sequencing of rat brain.

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Results for Vsx1_Uncx_Prrx2_Shox2_Noto

Z-value: 0.98

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Transcription factors associated with Vsx1_Uncx_Prrx2_Shox2_Noto

Gene Symbol Gene ID Gene Info
ENSRNOG00000042220 visual system homeobox 1
ENSRNOG00000001284 UNC homeobox
ENSRNOG00000058329 paired related homeobox 2
ENSRNOG00000012478 short stature homeobox 2
ENSRNOG00000037863 notochord homeobox

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Uncxrn6_v1_chr12_-_17186679_171866790.761.4e-01Click!
Shox2rn6_v1_chr2_-_164126783_1641267830.652.3e-01Click!
Prrx2rn6_v1_chr3_+_9681871_96818710.286.5e-01Click!
Vsx1rn6_v1_chr3_-_146491837_146491837-0.089.0e-01Click!

Activity profile of Vsx1_Uncx_Prrx2_Shox2_Noto motif

06percent_rep1 06percent_rep2 10percent 14percent 21percent −0.03−0.02−0.0100.010.02
activity (log2(tpm) per TFBS)

Sorted Z-values of Vsx1_Uncx_Prrx2_Shox2_Noto motif

−1.5−1−0.500.5114percent 06percent_rep2 21percent 10percent 06percent_rep1 
Z-value

Network of associatons between targets according to the STRING database.

First level regulatory network of Vsx1_Uncx_Prrx2_Shox2_Noto

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category:

Gene overrepresentation in curated gene sets: canonical pathways category:

Gene overrepresentation in curated gene sets: REACTOME pathways category: