GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Tlx1 Links NCBI RGD Ensembl	ENSRNOG00000016120	T-cell leukemia, homeobox 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Tlx1	rn6_v1_chr1_+_264893162_264893162	0.48	4.1e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr15_-_34550850 Show fit	1.48	ENSRNOT00000027794 ENSRNOT00000090228	Cbln3 Links NCBI RGD Ensembl Show fit	cerebellin 3 precursor
chr14_+_83724933 Show fit	1.12	ENSRNOT00000029848	Pla2g3 Links NCBI RGD Ensembl Show fit	phospholipase A2, group III
chr20_-_9855443 Show fit	0.92	ENSRNOT00000090275 ENSRNOT00000066266	Tff3 Links NCBI RGD Ensembl Show fit	trefoil factor 3
chr7_-_123088819 Show fit	0.67	ENSRNOT00000056077	AC096601.1 Links NCBI RGD Ensembl Show fit
chr17_-_61332391 Show fit	0.64	ENSRNOT00000034599	LOC100362965 Links NCBI RGD Ensembl Show fit	SNRPN upstream reading frame protein-like
chr4_-_147163467 Show fit	0.60	ENSRNOT00000010748	Timp4 Links NCBI RGD Ensembl Show fit	tissue inhibitor of metalloproteinase 4
chr19_+_55669626 Show fit	0.58	ENSRNOT00000033352	Cdh15 Links NCBI RGD Ensembl Show fit	cadherin 15
chr20_+_5008508 Show fit	0.57	ENSRNOT00000001153	Vwa7 Links NCBI RGD Ensembl Show fit	von Willebrand factor A domain containing 7
chr10_-_88670430 Show fit	0.51	ENSRNOT00000025547	Hcrt Links NCBI RGD Ensembl Show fit	hypocretin neuropeptide precursor
chr5_+_154522119 Show fit	0.47	ENSRNOT00000072618	E2f2 Links NCBI RGD Ensembl Show fit	E2F transcription factor 2
chr7_-_119441487 Show fit	0.45	ENSRNOT00000067635	Pvalb Links NCBI RGD Ensembl Show fit	parvalbumin
chr8_+_116776494 Show fit	0.45	ENSRNOT00000050702	Cdhr4 Links NCBI RGD Ensembl Show fit	cadherin-related family member 4
chr4_+_8256611 Show fit	0.44	ENSRNOT00000061894	AABR07059198.1 Links NCBI RGD Ensembl Show fit
chrX_-_10218583 Show fit	0.43	ENSRNOT00000013382	Nyx Links NCBI RGD Ensembl Show fit	nyctalopin
chr5_-_134526089 Show fit	0.43	ENSRNOT00000013321	Cyp4b1 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 4, subfamily b, polypeptide 1
chr15_-_27815261 Show fit	0.39	ENSRNOT00000032992	Klhl33 Links NCBI RGD Ensembl Show fit	kelch-like family member 33
chr9_+_117795132 Show fit	0.35	ENSRNOT00000086943	Akain1 Links NCBI RGD Ensembl Show fit	A-kinase anchor inhibitor 1
chr10_+_84147836 Show fit	0.35	ENSRNOT00000010527	Hoxb6 Links NCBI RGD Ensembl Show fit	homeo box B6
chr5_-_12526962 Show fit	0.30	ENSRNOT00000092104	St18 Links NCBI RGD Ensembl Show fit	suppression of tumorigenicity 18
chr3_+_110975923 Show fit	0.27	ENSRNOT00000016458	Gchfr Links NCBI RGD Ensembl Show fit	GTP cyclohydrolase I feedback regulator
chr8_-_61919874 Show fit	0.25	ENSRNOT00000064830	RGD1305464 Links NCBI RGD Ensembl Show fit	similar to human chromosome 15 open reading frame 39
chr13_+_90723092 Show fit	0.25	ENSRNOT00000010146	Kcnj10 Links NCBI RGD Ensembl Show fit	ATP-sensitive inward rectifier potassium channel 10
chr18_+_79406381 Show fit	0.24	ENSRNOT00000022303 ENSRNOT00000058295 ENSRNOT00000058296 ENSRNOT00000022280	Mbp Links NCBI RGD Ensembl Show fit	myelin basic protein
chr2_+_226900619 Show fit	0.23	ENSRNOT00000019638	Pde5a Links NCBI RGD Ensembl Show fit	phosphodiesterase 5A
chr20_-_12351813 Show fit	0.22	ENSRNOT00000065236	Slc19a1 Links NCBI RGD Ensembl Show fit	solute carrier family 19 member 1
chr3_+_149668102 Show fit	0.20	ENSRNOT00000055342	Bpifb1 Links NCBI RGD Ensembl Show fit	BPI fold containing family B, member 1
chr5_-_126395668 Show fit	0.20	ENSRNOT00000010396	Acot11 Links NCBI RGD Ensembl Show fit	acyl-CoA thioesterase 11
chr1_-_124803363 Show fit	0.19	ENSRNOT00000066380	Klf13 Links NCBI RGD Ensembl Show fit	Kruppel-like factor 13
chr4_+_7355574 Show fit	0.19	ENSRNOT00000013800	Kcnh2 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily H member 2
chr8_+_116154736 Show fit	0.19	ENSRNOT00000021218	Cacna2d2 Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel auxiliary subunit alpha2delta 2
chr16_+_54291251 Show fit	0.18	ENSRNOT00000079006	Mtus1 Links NCBI RGD Ensembl Show fit	microtubule associated tumor suppressor 1
chr4_+_169161585 Show fit	0.18	ENSRNOT00000079785	Emp1 Links NCBI RGD Ensembl Show fit	epithelial membrane protein 1
chr9_+_9970209 Show fit	0.18	ENSRNOT00000075215	Dennd1c Links NCBI RGD Ensembl Show fit	DENN/MADD domain containing 1C
chr10_-_104681377 Show fit	0.18	ENSRNOT00000046026	Trim65 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 65
chr11_+_31002451 Show fit	0.18	ENSRNOT00000002838	Eva1c Links NCBI RGD Ensembl Show fit	eva-1 homolog C
chr12_+_41543696 Show fit	0.17	ENSRNOT00000079639	Tpcn1 Links NCBI RGD Ensembl Show fit	two pore segment channel 1
chr10_-_104163634 Show fit	0.17	ENSRNOT00000005198	Mif4gd Links NCBI RGD Ensembl Show fit	MIF4G domain containing
chr16_-_74122889 Show fit	0.17	ENSRNOT00000025763	Plat Links NCBI RGD Ensembl Show fit	plasminogen activator, tissue type
chr1_-_162385575 Show fit	0.17	ENSRNOT00000016540	Thrsp Links NCBI RGD Ensembl Show fit	thyroid hormone responsive
chr5_+_136669674 Show fit	0.16	ENSRNOT00000048770	Slc6a9 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 9
chr6_-_104631355 Show fit	0.16	ENSRNOT00000007825	Slc10a1 Links NCBI RGD Ensembl Show fit	solute carrier family 10 member 1
chr14_-_103321270 Show fit	0.16	ENSRNOT00000006157	Meis1 Links NCBI RGD Ensembl Show fit	Meis homeobox 1
chr7_-_11001933 Show fit	0.15	ENSRNOT00000084006	Tle2 Links NCBI RGD Ensembl Show fit	transducin-like enhancer of split 2
chr1_+_147021436 Show fit	0.14	ENSRNOT00000042490	F8a1 Links NCBI RGD Ensembl Show fit	coagulation factor VIII-associated 1
chr13_-_80379929 Show fit	0.14	ENSRNOT00000067653 ENSRNOT00000075938	Dnm3 Links NCBI RGD Ensembl Show fit	dynamin 3
chr3_-_105512939 Show fit	0.14	ENSRNOT00000011773	Actc1 Links NCBI RGD Ensembl Show fit	actin, alpha, cardiac muscle 1
chr4_+_62019970 Show fit	0.14	ENSRNOT00000013133	LOC100910708 Links NCBI RGD Ensembl Show fit	aldose reductase-related protein 1-like
chr4_+_7377563 Show fit	0.14	ENSRNOT00000084826	Kcnh2 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily H member 2
chr4_+_144382945 Show fit	0.14	ENSRNOT00000007601	Cav3 Links NCBI RGD Ensembl Show fit	caveolin 3
chr3_-_3574787 Show fit	0.13	ENSRNOT00000087651	Nacc2 Links NCBI RGD Ensembl Show fit	NACC family member 2
chr17_+_24416651 Show fit	0.13	ENSRNOT00000024458	Cd83 Links NCBI RGD Ensembl Show fit	CD83 molecule
chr17_-_43640387 Show fit	0.13	ENSRNOT00000087731	Hist1h1c Links NCBI RGD Ensembl Show fit	histone cluster 1 H1 family member c
chr7_-_142348232 Show fit	0.12	ENSRNOT00000078848	Galnt6 Links NCBI RGD Ensembl Show fit	polypeptide N-acetylgalactosaminyltransferase 6
chr13_+_52588917 Show fit	0.12	ENSRNOT00000011999	Phlda3 Links NCBI RGD Ensembl Show fit	pleckstrin homology-like domain, family A, member 3
chr1_+_221099998 Show fit	0.11	ENSRNOT00000028262	Ltbp3 Links NCBI RGD Ensembl Show fit	latent transforming growth factor beta binding protein 3
chr4_-_117575154 Show fit	0.11	ENSRNOT00000075813	LOC102556148 Links NCBI RGD Ensembl Show fit	probable N-acetyltransferase CML2-like
chr9_+_81615251 Show fit	0.11	ENSRNOT00000081106 ENSRNOT00000020049	Pnkd Links NCBI RGD Ensembl Show fit	paroxysmal nonkinesigenic dyskinesia
chr1_-_89543967 Show fit	0.11	ENSRNOT00000079631	Hpn Links NCBI RGD Ensembl Show fit	hepsin
chr2_-_195908037 Show fit	0.11	ENSRNOT00000079776	Tuft1 Links NCBI RGD Ensembl Show fit	tuftelin 1
chr13_-_94289333 Show fit	0.11	ENSRNOT00000078195	Pld5 Links NCBI RGD Ensembl Show fit	phospholipase D family, member 5
chr1_-_184188911 Show fit	0.11	ENSRNOT00000055124 ENSRNOT00000014948	Calca Links NCBI RGD Ensembl Show fit	calcitonin-related polypeptide alpha
chr1_-_221281180 Show fit	0.11	ENSRNOT00000028379	Cdc42ep2 Links NCBI RGD Ensembl Show fit	CDC42 effector protein 2
chr2_+_95320283 Show fit	0.10	ENSRNOT00000015537	Hey1 Links NCBI RGD Ensembl Show fit	hes-related family bHLH transcription factor with YRPW motif 1
chr2_-_195888216 Show fit	0.10	ENSRNOT00000056436	Tuft1 Links NCBI RGD Ensembl Show fit	tuftelin 1
chr14_+_84237520 Show fit	0.10	ENSRNOT00000083580	Gal3st1 Links NCBI RGD Ensembl Show fit	galactose-3-O-sulfotransferase 1
chr5_+_120568242 Show fit	0.10	ENSRNOT00000050597	Lepr Links NCBI RGD Ensembl Show fit	leptin receptor
chr17_+_80882666 Show fit	0.10	ENSRNOT00000024430	Vim Links NCBI RGD Ensembl Show fit	vimentin
chr13_+_112031594 Show fit	0.10	ENSRNOT00000008440	Lamb3 Links NCBI RGD Ensembl Show fit	laminin subunit beta 3
chr8_+_116154913 Show fit	0.09	ENSRNOT00000081242	Cacna2d2 Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel auxiliary subunit alpha2delta 2
chr10_+_65586504 Show fit	0.09	ENSRNOT00000015535 ENSRNOT00000046388	Aldoc Links NCBI RGD Ensembl Show fit	aldolase, fructose-bisphosphate C
chr1_-_100669684 Show fit	0.09	ENSRNOT00000091760	Myh14 Links NCBI RGD Ensembl Show fit	myosin heavy chain 14
chr1_+_59129951 Show fit	0.09	ENSRNOT00000017165	Riok2 Links NCBI RGD Ensembl Show fit	RIO kinase 2
chr1_+_221538104 Show fit	0.09	ENSRNOT00000028527	Batf2 Links NCBI RGD Ensembl Show fit	basic leucine zipper ATF-like transcription factor 2
chr12_-_46809849 Show fit	0.09	ENSRNOT00000081134	Pxn Links NCBI RGD Ensembl Show fit	paxillin
chr1_-_49844547 Show fit	0.08	ENSRNOT00000086127 ENSRNOT00000077423 ENSRNOT00000089439 ENSRNOT00000090521	AABR07001519.1 Links NCBI RGD Ensembl Show fit
chr13_+_47454591 Show fit	0.08	ENSRNOT00000005791	LOC498222 Links NCBI RGD Ensembl Show fit	similar to specifically androgen-regulated protein
chr1_-_89473904 Show fit	0.08	ENSRNOT00000089474	Fxyd5 Links NCBI RGD Ensembl Show fit	FXYD domain-containing ion transport regulator 5
chr10_+_730247 Show fit	0.07	ENSRNOT00000083714	Fopnl Links NCBI RGD Ensembl Show fit	FGFR1OP N-terminal like
chr4_+_62220736 Show fit	0.07	ENSRNOT00000086377	Cald1 Links NCBI RGD Ensembl Show fit	caldesmon 1
chr2_+_93792601 Show fit	0.07	ENSRNOT00000014701 ENSRNOT00000077311	Fabp4 Links NCBI RGD Ensembl Show fit	fatty acid binding protein 4
chr13_-_100672731 Show fit	0.07	ENSRNOT00000004319	Degs1 Links NCBI RGD Ensembl Show fit	delta(4)-desaturase, sphingolipid 1
chr10_+_17486579 Show fit	0.07	ENSRNOT00000080404	Stk10 Links NCBI RGD Ensembl Show fit	serine/threonine kinase 10
chr12_-_14244316 Show fit	0.07	ENSRNOT00000001466	Foxk1 Links NCBI RGD Ensembl Show fit	forkhead box K1
chr3_-_175327689 Show fit	0.07	ENSRNOT00000082981	Taf4 Links NCBI RGD Ensembl Show fit	TATA-box binding protein associated factor 4
chr1_+_135083974 Show fit	0.07	ENSRNOT00000016481 ENSRNOT00000076098	Fam174b Links NCBI RGD Ensembl Show fit	family with sequence similarity 174, member B
chr7_+_18409147 Show fit	0.07	ENSRNOT00000086336 ENSRNOT00000011849	Adamts10 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase with thrombospondin type 1 motif, 10
chr3_-_151224123 Show fit	0.07	ENSRNOT00000026091	Trpc4ap Links NCBI RGD Ensembl Show fit	transient receptor potential cation channel, subfamily C, member 4 associated protein
chrX_+_156909913 Show fit	0.07	ENSRNOT00000084390	L1cam Links NCBI RGD Ensembl Show fit	L1 cell adhesion molecule
chr7_-_60742660 Show fit	0.07	ENSRNOT00000086116	Mdm2 Links NCBI RGD Ensembl Show fit	MDM2 proto-oncogene
chr14_+_10534423 Show fit	0.07	ENSRNOT00000002983	Hpse Links NCBI RGD Ensembl Show fit	heparanase
chr20_-_7307280 Show fit	0.06	ENSRNOT00000000583 ENSRNOT00000079933	Spdef Links NCBI RGD Ensembl Show fit	SAM pointed domain containing ets transcription factor
chr4_+_71675383 Show fit	0.06	ENSRNOT00000051265	Clcn1 Links NCBI RGD Ensembl Show fit	chloride voltage-gated channel 1
chr1_+_184299250 Show fit	0.06	ENSRNOT00000030540	Insc Links NCBI RGD Ensembl Show fit	inscuteable homolog (Drosophila)
chrX_+_122724129 Show fit	0.06	ENSRNOT00000017746	LOC100360218 Links NCBI RGD Ensembl Show fit	interleukin 13 receptor, alpha 1-like
chr1_+_266781617 Show fit	0.06	ENSRNOT00000027417	Ina Links NCBI RGD Ensembl Show fit	internexin neuronal intermediate filament protein, alpha
chr3_+_63510293 Show fit	0.06	ENSRNOT00000058093	Dfnb59 Links NCBI RGD Ensembl Show fit	deafness, autosomal recessive 59
chr12_+_40553741 Show fit	0.06	ENSRNOT00000057396	LOC100360238 Links NCBI RGD Ensembl Show fit	rCG21419-like
chr2_-_206997519 Show fit	0.06	ENSRNOT00000027042	Lrig2 Links NCBI RGD Ensembl Show fit	leucine-rich repeats and immunoglobulin-like domains 2
chr20_+_1749716 Show fit	0.06	ENSRNOT00000048856	Olr1735 Links NCBI RGD Ensembl Show fit	olfactory receptor 1735
chr5_+_60900450 Show fit	0.06	ENSRNOT00000016384	Dcaf10 Links NCBI RGD Ensembl Show fit	DDB1 and CUL4 associated factor 10
chr14_+_46001849 Show fit	0.06	ENSRNOT00000076611	Rell1 Links NCBI RGD Ensembl Show fit	RELT-like 1
chr8_-_85413484 Show fit	0.05	ENSRNOT00000010961	Fbxo9 Links NCBI RGD Ensembl Show fit	f-box protein 9
chr6_-_62798384 Show fit	0.05	ENSRNOT00000093200	Ndufa10l1 Links NCBI RGD Ensembl Show fit	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10-like 1
chr2_-_154418920 Show fit	0.05	ENSRNOT00000076326	Plch1 Links NCBI RGD Ensembl Show fit	phospholipase C, eta 1
chr7_+_142575672 Show fit	0.05	ENSRNOT00000080923 ENSRNOT00000008160	Scn8a Links NCBI RGD Ensembl Show fit	sodium voltage-gated channel alpha subunit 8
chrX_-_81817101 Show fit	0.05	ENSRNOT00000003730	AABR07039648.1 Links NCBI RGD Ensembl Show fit
chr4_+_85662892 Show fit	0.05	ENSRNOT00000016175 ENSRNOT00000043851 ENSRNOT00000035722 ENSRNOT00000046192	Adcyap1r1 Links NCBI RGD Ensembl Show fit	adenylate cyclase activating polypeptide 1 receptor type 1
chr2_+_199831990 Show fit	0.05	ENSRNOT00000063783 ENSRNOT00000086588	Prkab2 Links NCBI RGD Ensembl Show fit	protein kinase AMP-activated non-catalytic subunit beta 2
chr12_+_16988136 Show fit	0.05	ENSRNOT00000078925 ENSRNOT00000036744	Micall2 Links NCBI RGD Ensembl Show fit	MICAL-like 2
chr12_-_37538403 Show fit	0.05	ENSRNOT00000001402	Snrnp35 Links NCBI RGD Ensembl Show fit	small nuclear ribonucleoprotein U11/U12 subunit 35
chr20_+_27954433 Show fit	0.05	ENSRNOT00000064288	Lims1 Links NCBI RGD Ensembl Show fit	LIM zinc finger domain containing 1
chr4_-_17594598 Show fit	0.05	ENSRNOT00000008936	Sema3e Links NCBI RGD Ensembl Show fit	semaphorin 3E
chrX_+_63343546 Show fit	0.05	ENSRNOT00000076315	Klhl15 Links NCBI RGD Ensembl Show fit	kelch-like family member 15
chr5_+_8876044 Show fit	0.05	ENSRNOT00000008877	Cops5 Links NCBI RGD Ensembl Show fit	COP9 signalosome subunit 5
chr20_-_2212171 Show fit	0.05	ENSRNOT00000085912	Trim26 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 26
chr2_-_252691886 Show fit	0.04	ENSRNOT00000068739	Prkacb Links NCBI RGD Ensembl Show fit	protein kinase cAMP-activated catalytic subunit beta
chr1_+_225048149 Show fit	0.04	ENSRNOT00000036454	Lrrn4cl Links NCBI RGD Ensembl Show fit	LRRN4 C-terminal like
chr17_-_2705123 Show fit	0.04	ENSRNOT00000024940	Olr1652 Links NCBI RGD Ensembl Show fit	olfactory receptor 1652
chr10_-_56289882 Show fit	0.04	ENSRNOT00000090762 ENSRNOT00000056903	Tnfsf13 Links NCBI RGD Ensembl Show fit	tumor necrosis factor superfamily member 13
chrX_+_43881246 Show fit	0.04	ENSRNOT00000005153	LOC317456 Links NCBI RGD Ensembl Show fit	hypothetical LOC317456
chr13_+_89919667 Show fit	0.04	ENSRNOT00000006196	Itln1 Links NCBI RGD Ensembl Show fit	intelectin 1
chr16_+_23668595 Show fit	0.04	ENSRNOT00000067886	Psd3 Links NCBI RGD Ensembl Show fit	pleckstrin and Sec7 domain containing 3
chrX_-_135521598 Show fit	0.04	ENSRNOT00000033619	Gpr119 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 119
chr13_+_51034256 Show fit	0.04	ENSRNOT00000004528 ENSRNOT00000046854 ENSRNOT00000087320	Mybph Links NCBI RGD Ensembl Show fit	myosin binding protein H
chr18_-_36579403 Show fit	0.04	ENSRNOT00000025284	Lars Links NCBI RGD Ensembl Show fit	leucyl-tRNA synthetase
chr4_+_157126935 Show fit	0.04	ENSRNOT00000056051	C1r Links NCBI RGD Ensembl Show fit	complement C1r
chr5_-_173098816 Show fit	0.04	ENSRNOT00000023696	Mib2 Links NCBI RGD Ensembl Show fit	mindbomb E3 ubiquitin protein ligase 2
chrX_-_138972684 Show fit	0.04	ENSRNOT00000040165	Hs6st2 Links NCBI RGD Ensembl Show fit	heparan sulfate 6-O-sulfotransferase 2
chr1_-_89042176 Show fit	0.04	ENSRNOT00000080842	Kmt2b Links NCBI RGD Ensembl Show fit	lysine methyltransferase 2B
chr1_-_198104109 Show fit	0.03	ENSRNOT00000026186	Sult1a1 Links NCBI RGD Ensembl Show fit	sulfotransferase family 1A member 1
chr18_+_68408890 Show fit	0.03	ENSRNOT00000039702	Ccdc68 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 68
chr1_+_170383682 Show fit	0.03	ENSRNOT00000024224	Smpd1 Links NCBI RGD Ensembl Show fit	sphingomyelin phosphodiesterase 1
chr4_+_169147243 Show fit	0.03	ENSRNOT00000011580	Emp1 Links NCBI RGD Ensembl Show fit	epithelial membrane protein 1
chr10_+_105630810 Show fit	0.03	ENSRNOT00000064904	Prcd Links NCBI RGD Ensembl Show fit	photoreceptor disc component
chr5_-_126911520 Show fit	0.03	ENSRNOT00000091521	Dio1 Links NCBI RGD Ensembl Show fit	deiodinase, iodothyronine, type I
chr17_-_14627937 Show fit	0.03	ENSRNOT00000020532	NEWGENE_1308171 Links NCBI RGD Ensembl Show fit	osteoglycin
chr9_-_94495333 Show fit	0.03	ENSRNOT00000021507	Kcnj13 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily J member 13
chr5_-_138697641 Show fit	0.03	ENSRNOT00000012062	Guca2b Links NCBI RGD Ensembl Show fit	guanylate cyclase activator 2B
chr7_-_70926903 Show fit	0.03	ENSRNOT00000031005	Lrp1 Links NCBI RGD Ensembl Show fit	LDL receptor related protein 1
chr3_-_2689084 Show fit	0.03	ENSRNOT00000020926	Ptgds Links NCBI RGD Ensembl Show fit	prostaglandin D2 synthase
chr8_-_116045954 Show fit	0.03	ENSRNOT00000020065	Mapkapk3 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase-activated protein kinase 3
chr5_-_172424081 Show fit	0.03	ENSRNOT00000019096	Plch2 Links NCBI RGD Ensembl Show fit	phospholipase C, eta 2
chr17_-_90756048 Show fit	0.03	ENSRNOT00000085669	Ero1b Links NCBI RGD Ensembl Show fit	endoplasmic reticulum oxidoreductase 1 beta
chr17_+_43679411 Show fit	0.03	ENSRNOT00000085865	AC130391.3 Links NCBI RGD Ensembl Show fit
chr10_-_11942885 Show fit	0.03	ENSRNOT00000061019	Olr1356 Links NCBI RGD Ensembl Show fit	olfactory receptor 1356
chr10_+_57322331 Show fit	0.03	ENSRNOT00000041493	Kif1c Links NCBI RGD Ensembl Show fit	kinesin family member 1C
chr6_+_107245820 Show fit	0.03	ENSRNOT00000012757	Papln Links NCBI RGD Ensembl Show fit	papilin, proteoglycan-like sulfated glycoprotein
chr11_+_30363280 Show fit	0.03	ENSRNOT00000002885	Sod1 Links NCBI RGD Ensembl Show fit	superoxide dismutase 1, soluble
chr16_-_83132785 Show fit	0.03	ENSRNOT00000043449	Arhgef7 Links NCBI RGD Ensembl Show fit	Rho guanine nucleotide exchange factor 7
chr1_-_48565711 Show fit	0.03	ENSRNOT00000023387	AABR07001512.1 Links NCBI RGD Ensembl Show fit
chr20_-_2211995 Show fit	0.03	ENSRNOT00000077201	Trim26 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 26
chr1_-_85368031 Show fit	0.03	ENSRNOT00000026778	Paf1 Links NCBI RGD Ensembl Show fit	PAF1 homolog, Paf1/RNA polymerase II complex component
chrX_-_159841072 Show fit	0.03	ENSRNOT00000001158	Arhgef6 Links NCBI RGD Ensembl Show fit	Rac/Cdc42 guanine nucleotide exchange factor 6
chr2_-_196304169 Show fit	0.03	ENSRNOT00000028639	Scnm1 Links NCBI RGD Ensembl Show fit	sodium channel modifier 1
chr20_-_6864387 Show fit	0.03	ENSRNOT00000068527	Ppil1 Links NCBI RGD Ensembl Show fit	peptidylprolyl isomerase like 1
chr8_-_111107599 Show fit	0.03	ENSRNOT00000031313	Cep63 Links NCBI RGD Ensembl Show fit	centrosomal protein 63
chr10_+_83201311 Show fit	0.03	ENSRNOT00000006179	Slc35b1 Links NCBI RGD Ensembl Show fit	solute carrier family 35, member B1
chr7_+_119647375 Show fit	0.03	ENSRNOT00000046563	Kctd17 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 17
chr12_+_41316764 Show fit	0.03	ENSRNOT00000090867	Oas3 Links NCBI RGD Ensembl Show fit	2'-5'-oligoadenylate synthetase 3
chr17_+_42302540 Show fit	0.02	ENSRNOT00000025389	Gmnn Links NCBI RGD Ensembl Show fit	geminin, DNA replication inhibitor
chr13_+_79269973 Show fit	0.02	ENSRNOT00000003969	Tnfsf4 Links NCBI RGD Ensembl Show fit	tumor necrosis factor superfamily member 4
chr7_-_143016040 Show fit	0.02	ENSRNOT00000029697	Krt80 Links NCBI RGD Ensembl Show fit	keratin 80
chr4_-_117111653 Show fit	0.02	ENSRNOT00000057537	Sfxn5 Links NCBI RGD Ensembl Show fit	sideroflexin 5
chr16_+_20824864 Show fit	0.02	ENSRNOT00000092293 ENSRNOT00000092446	Upf1 Links NCBI RGD Ensembl Show fit	UPF1, RNA helicase and ATPase
chr8_-_60830448 Show fit	0.02	ENSRNOT00000022419	Tspan3 Links NCBI RGD Ensembl Show fit	tetraspanin 3
chr10_+_13736313 Show fit	0.02	ENSRNOT00000079700	Abca3 Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily A member 3
chr20_-_2224463 Show fit	0.02	ENSRNOT00000001019	Trim26 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 26
chr1_+_91433030 Show fit	0.02	ENSRNOT00000015205	Slc7a10 Links NCBI RGD Ensembl Show fit	solute carrier family 7 member 10
chr1_-_199336451 Show fit	0.02	ENSRNOT00000035672	Prss53 Links NCBI RGD Ensembl Show fit	protease, serine, 53
chr17_+_85364483 Show fit	0.02	ENSRNOT00000064257	Bmi1 Links NCBI RGD Ensembl Show fit	BMI1 proto-oncogene, polycomb ring finger
chr3_+_109862117 Show fit	0.02	ENSRNOT00000083351 ENSRNOT00000070912	Thbs1 Links NCBI RGD Ensembl Show fit	thrombospondin 1
chr7_+_76980040 Show fit	0.02	ENSRNOT00000050726	LOC108350501 Links NCBI RGD Ensembl Show fit	40S ribosomal protein S29
chr5_+_152466331 Show fit	0.02	ENSRNOT00000082841	LOC108351043 Links NCBI RGD Ensembl Show fit	uncharacterized LOC108351043
chr20_-_13142856 Show fit	0.02	ENSRNOT00000001743	S100b Links NCBI RGD Ensembl Show fit	S100 calcium binding protein B
chr4_+_147692028 Show fit	0.02	ENSRNOT00000014207	Cand2 Links NCBI RGD Ensembl Show fit	cullin-associated and neddylation-dissociated 2 (putative)
chr13_+_90759260 Show fit	0.02	ENSRNOT00000010551	Pigm Links NCBI RGD Ensembl Show fit	phosphatidylinositol glycan anchor biosynthesis, class M
chrX_-_156589907 Show fit	0.02	ENSRNOT00000083147	Opn1mw Links NCBI RGD Ensembl Show fit	opsin 1 (cone pigments), medium-wave-sensitive
chr3_-_2770620 Show fit	0.02	ENSRNOT00000008253	Traf2 Links NCBI RGD Ensembl Show fit	Tnf receptor-associated factor 2
chr8_+_116857684 Show fit	0.02	ENSRNOT00000026711	Mst1 Links NCBI RGD Ensembl Show fit	macrophage stimulating 1
chr10_+_86860685 Show fit	0.02	ENSRNOT00000084644	Rara Links NCBI RGD Ensembl Show fit	retinoic acid receptor, alpha
chr14_-_8510138 Show fit	0.02	ENSRNOT00000080758	Arhgap24 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 24
chr7_-_70842405 Show fit	0.02	ENSRNOT00000047449	Nxph4 Links NCBI RGD Ensembl Show fit	neurexophilin 4
chr2_-_187622373 Show fit	0.02	ENSRNOT00000026396	Rhbg Links NCBI RGD Ensembl Show fit	Rh family B glycoprotein
chr18_+_86071662 Show fit	0.01	ENSRNOT00000064901	Rttn Links NCBI RGD Ensembl Show fit	rotatin
chr1_+_215214853 Show fit	0.01	ENSRNOT00000071235 ENSRNOT00000080442	LOC103690160 Links NCBI RGD Ensembl Show fit	SH3 and multiple ankyrin repeat domains protein 2-like
chr1_+_212578450 Show fit	0.01	ENSRNOT00000064501	Paox Links NCBI RGD Ensembl Show fit	polyamine oxidase
chrX_+_115561332 Show fit	0.01	ENSRNOT00000076680 ENSRNOT00000075912 ENSRNOT00000007968	Alg13 Links NCBI RGD Ensembl Show fit	ALG13, UDP-N-acetylglucosaminyltransferase subunit
chr10_-_82326771 Show fit	0.01	ENSRNOT00000004673	Acsf2 Links NCBI RGD Ensembl Show fit	acyl-CoA synthetase family member 2
chr12_-_37688743 Show fit	0.01	ENSRNOT00000030251	RGD1563482 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein FLJ38663
chr15_+_10462749 Show fit	0.01	ENSRNOT00000008035	Oxsm Links NCBI RGD Ensembl Show fit	3-oxoacyl-ACP synthase, mitochondrial
chr1_-_101514547 Show fit	0.01	ENSRNOT00000079633	Ppp1r15a Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 15A
chr2_+_180936688 Show fit	0.01	ENSRNOT00000016039	Asic5 Links NCBI RGD Ensembl Show fit	acid sensing ion channel subunit family member 5
chr12_-_52187164 Show fit	0.01	ENSRNOT00000056722	Galnt9 Links NCBI RGD Ensembl Show fit	polypeptide N-acetylgalactosaminyltransferase 9
chr4_-_60358562 Show fit	0.01	ENSRNOT00000018001	Chchd3 Links NCBI RGD Ensembl Show fit	coiled-coil-helix-coiled-coil-helix domain containing 3
chr19_-_31867850 Show fit	0.01	ENSRNOT00000024689	Anapc10 Links NCBI RGD Ensembl Show fit	anaphase promoting complex subunit 10
chr9_-_95362014 Show fit	0.01	ENSRNOT00000051065	Hjurp Links NCBI RGD Ensembl Show fit	Holliday junction recognition protein
chr16_-_70006016 Show fit	0.01	ENSRNOT00000092030	Gm1141 Links NCBI RGD Ensembl Show fit	predicted gene 1141
chr4_-_85386231 Show fit	0.01	ENSRNOT00000015316	Inmt Links NCBI RGD Ensembl Show fit	indolethylamine N-methyltransferase
chr6_-_77421286 Show fit	0.01	ENSRNOT00000011453	Nkx2-1 Links NCBI RGD Ensembl Show fit	NK2 homeobox 1
chrX_-_82743753 Show fit	0.01	ENSRNOT00000003512	Rps6ka6 Links NCBI RGD Ensembl Show fit	ribosomal protein S6 kinase A6

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.1	GO:0019372	lipoxygenase pathway(GO:0019372)
0.1	0.3	GO:1902303	negative regulation of potassium ion export(GO:1902303)
0.1	0.7	GO:0051045	negative regulation of membrane protein ectodomain proteolysis(GO:0051045)
0.1	0.2	GO:0051935	amino acid neurotransmitter reuptake(GO:0051933) glutamate reuptake(GO:0051935)
0.1	0.2	GO:1904209	regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904207) positive regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904209) positive regulation of metalloendopeptidase activity(GO:1904685)
0.1	0.5	GO:1990086	lens fiber cell apoptotic process(GO:1990086)
0.1	0.5	GO:0051970	negative regulation of transmission of nerve impulse(GO:0051970)
0.1	0.2	GO:0051958	methotrexate transport(GO:0051958)
0.1	0.4	GO:0018879	biphenyl metabolic process(GO:0018879)
0.1	0.2	GO:0055118	negative regulation of cardiac muscle contraction(GO:0055118)
0.0	0.1	GO:0035995	detection of muscle stretch(GO:0035995)
0.0	0.2	GO:0060279	positive regulation of ovulation(GO:0060279)
0.0	0.1	GO:1902460	regulation of mesenchymal stem cell proliferation(GO:1902460) positive regulation of mesenchymal stem cell proliferation(GO:1902462)
0.0	0.1	GO:0034769	basement membrane disassembly(GO:0034769)
0.0	0.1	GO:0001983	baroreceptor response to increased systemic arterial blood pressure(GO:0001983)
0.0	0.1	GO:2000820	negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000820)
0.0	0.1	GO:0006682	galactosylceramide biosynthetic process(GO:0006682) galactolipid biosynthetic process(GO:0019375)
0.0	0.2	GO:0060024	rhythmic synaptic transmission(GO:0060024)
0.0	0.1	GO:1903999	negative regulation of eating behavior(GO:1903999) regulation of locomotor rhythm(GO:1904059)
0.0	0.1	GO:0036135	Schwann cell migration(GO:0036135) regulation of Schwann cell migration(GO:1900147)
0.0	0.1	GO:0061002	sperm ejaculation(GO:0042713) negative regulation of dendritic spine morphogenesis(GO:0061002) neurotransmitter receptor internalization(GO:0099590)
0.0	0.1	GO:0032713	negative regulation of interleukin-4 production(GO:0032713)
0.0	0.1	GO:0030200	heparan sulfate proteoglycan catabolic process(GO:0030200)
0.0	0.1	GO:0061727	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.0	0.2	GO:0034144	negative regulation of toll-like receptor 4 signaling pathway(GO:0034144)
0.0	0.2	GO:0016584	nucleosome positioning(GO:0016584)
0.0	0.1	GO:0030240	skeletal muscle thin filament assembly(GO:0030240)
0.0	0.2	GO:0060012	synaptic transmission, glycinergic(GO:0060012)
0.0	0.1	GO:0097069	cellular response to thyroxine stimulus(GO:0097069)
0.0	0.1	GO:0035772	interleukin-13-mediated signaling pathway(GO:0035772)
0.0	0.0	GO:0002426	immunoglobulin production in mucosal tissue(GO:0002426)
0.0	0.2	GO:0045647	negative regulation of erythrocyte differentiation(GO:0045647)
0.0	0.0	GO:0006438	valyl-tRNA aminoacylation(GO:0006438)
0.0	0.0	GO:0015015	heparan sulfate proteoglycan biosynthetic process, enzymatic modification(GO:0015015)
0.0	0.0	GO:0000294	nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay(GO:0000294)
0.0	0.1	GO:0000056	ribosomal small subunit export from nucleus(GO:0000056)
0.0	0.4	GO:0010738	regulation of protein kinase A signaling(GO:0010738)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	1.1	GO:0042629	mast cell granule(GO:0042629)
0.0	0.2	GO:0033269	internode region of axon(GO:0033269)
0.0	0.1	GO:0097513	myosin II filament(GO:0097513)
0.0	0.1	GO:0045098	type III intermediate filament(GO:0045098)
0.0	0.1	GO:0030478	actin cap(GO:0030478)
0.0	0.1	GO:0044327	dendritic spine head(GO:0044327)
0.0	0.2	GO:0097449	astrocyte projection(GO:0097449)
0.0	0.1	GO:0005610	laminin-5 complex(GO:0005610)
0.0	0.1	GO:0005952	cAMP-dependent protein kinase complex(GO:0005952)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0015350	methotrexate transporter activity(GO:0015350)
0.1	0.2	GO:0015272	ATP-activated inward rectifier potassium channel activity(GO:0015272)
0.1	0.1	GO:0001515	opioid peptide activity(GO:0001515)
0.0	0.3	GO:0000155	phosphorelay sensor kinase activity(GO:0000155)
0.0	0.2	GO:0008508	bile acid:sodium symporter activity(GO:0008508)
0.0	0.4	GO:0008191	metalloendopeptidase inhibitor activity(GO:0008191)
0.0	0.1	GO:0031798	type 1 metabotropic glutamate receptor binding(GO:0031798)
0.0	0.2	GO:0072345	NAADP-sensitive calcium-release channel activity(GO:0072345)
0.0	0.1	GO:0035939	microsatellite binding(GO:0035939)
0.0	1.1	GO:0004623	phospholipase A2 activity(GO:0004623)
0.0	0.1	GO:0001733	galactosylceramide sulfotransferase activity(GO:0001733)
0.0	0.1	GO:0042284	sphingolipid delta-4 desaturase activity(GO:0042284)
0.0	0.6	GO:0005184	neuropeptide hormone activity(GO:0005184)
0.0	0.4	GO:0015643	toxic substance binding(GO:0015643)
0.0	0.2	GO:0019911	structural constituent of myelin sheath(GO:0019911)
0.0	0.1	GO:0004416	hydroxyacylglutathione hydrolase activity(GO:0004416)
0.0	0.1	GO:1990254	keratin filament binding(GO:1990254)
0.0	0.1	GO:0050429	calcium-dependent phospholipase C activity(GO:0050429)
0.0	0.2	GO:0047555	3',5'-cyclic-GMP phosphodiesterase activity(GO:0047555)
0.0	0.1	GO:0071253	connexin binding(GO:0071253)
0.0	0.1	GO:0004999	vasoactive intestinal polypeptide receptor activity(GO:0004999)
0.0	0.4	GO:0034237	protein kinase A regulatory subunit binding(GO:0034237)
0.0	0.2	GO:0015187	glycine transmembrane transporter activity(GO:0015187)
0.0	0.1	GO:0004332	fructose-bisphosphate aldolase activity(GO:0004332)
0.0	0.0	GO:0004832	valine-tRNA ligase activity(GO:0004832)
0.0	0.0	GO:0050656	aryl sulfotransferase activity(GO:0004062) steroid sulfotransferase activity(GO:0050294) 3'-phosphoadenosine 5'-phosphosulfate binding(GO:0050656)
0.0	0.1	GO:0004653	polypeptide N-acetylgalactosaminyltransferase activity(GO:0004653)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	SA REG CASCADE OF CYCLIN EXPR	Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases.
0.0	0.9	PID IL4 2PATHWAY	IL4-mediated signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.1	REACTOME ACYL CHAIN REMODELLING OF PG	Genes involved in Acyl chain remodelling of PG
0.0	0.5	REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX	Genes involved in CDC6 association with the ORC:origin complex
0.0	0.3	REACTOME TETRAHYDROBIOPTERIN BH4 SYNTHESIS RECYCLING SALVAGE AND REGULATION	Genes involved in Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation
0.0	0.6	REACTOME ADHERENS JUNCTIONS INTERACTIONS	Genes involved in Adherens junctions interactions
0.0	0.1	REACTOME RECYCLING OF BILE ACIDS AND SALTS	Genes involved in Recycling of bile acids and salts
0.0	0.1	REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION	Genes involved in Apoptosis induced DNA fragmentation