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GSE49485: Hypoxia transcriptome sequencing of rat brain.
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Results for Tfap2e
Z-value: 0.23
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Transcription factors associated with Tfap2e
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
Tfap2e
|
ENSRNOG00000027595 | transcription factor AP-2 epsilon |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Tfap2e | rn6_v1_chr5_-_144761787_144761787 | -0.45 | 4.4e-01 | Click! |
Activity profile of Tfap2e motif
Sorted Z-values of Tfap2e motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr20_-_3793985 | 0.13 |
ENSRNOT00000049540
ENSRNOT00000086293 |
RT1-CE16
|
RT1 class I, locus CE16 |
| chr15_+_108908607 | 0.07 |
ENSRNOT00000089455
|
Zic2
|
Zic family member 2 |
| chr10_+_86340940 | 0.07 |
ENSRNOT00000073486
|
Pnmt
|
phenylethanolamine-N-methyltransferase |
| chr1_+_266143818 | 0.06 |
ENSRNOT00000026987
|
Sufu
|
SUFU negative regulator of hedgehog signaling |
| chr1_+_81499821 | 0.04 |
ENSRNOT00000027100
|
Lypd3
|
Ly6/Plaur domain containing 3 |
| chr4_+_140247313 | 0.04 |
ENSRNOT00000040255
ENSRNOT00000064025 ENSRNOT00000041130 ENSRNOT00000043646 |
Itpr1
|
inositol 1,4,5-trisphosphate receptor, type 1 |
| chr1_+_98440186 | 0.04 |
ENSRNOT00000024150
|
Iglon5
|
IgLON family member 5 |
| chr4_-_67520356 | 0.03 |
ENSRNOT00000014604
|
Braf
|
B-Raf proto-oncogene, serine/threonine kinase |
| chr3_+_5709236 | 0.03 |
ENSRNOT00000061201
ENSRNOT00000070887 |
Dbh
|
dopamine beta-hydroxylase |
| chr19_-_19832812 | 0.02 |
ENSRNOT00000084657
|
Papd5
|
poly(A) RNA polymerase D5, non-canonical |
| chr6_+_29012207 | 0.02 |
ENSRNOT00000079077
|
Atad2b
|
ATPase family, AAA domain containing 2B |
| chr12_+_44931494 | 0.02 |
ENSRNOT00000001498
|
Rfc5
|
replication factor C subunit 5 |
| chr2_+_3400977 | 0.02 |
ENSRNOT00000093593
|
Mctp1
|
multiple C2 and transmembrane domain containing 1 |
| chr10_+_15485905 | 0.02 |
ENSRNOT00000027609
|
Tmem8a
|
transmembrane protein 8A |
| chr11_-_57993548 | 0.01 |
ENSRNOT00000002957
|
Nectin3
|
nectin cell adhesion molecule 3 |
| chr10_-_98018014 | 0.01 |
ENSRNOT00000005367
|
Fam20a
|
FAM20A, golgi associated secretory pathway pseudokinase |
| chr4_+_120133713 | 0.01 |
ENSRNOT00000017240
|
Gata2
|
GATA binding protein 2 |
| chr1_+_154377447 | 0.01 |
ENSRNOT00000084268
ENSRNOT00000092086 ENSRNOT00000091470 ENSRNOT00000025415 |
Picalm
|
phosphatidylinositol binding clathrin assembly protein |
| chr14_+_81819415 | 0.01 |
ENSRNOT00000018515
ENSRNOT00000075863 ENSRNOT00000077060 |
Mxd4
|
Max dimerization protein 4 |
| chr15_-_88670349 | 0.01 |
ENSRNOT00000012881
|
Rnf219
|
ring finger protein 219 |
| chr19_-_19832459 | 0.01 |
ENSRNOT00000067582
|
Papd5
|
poly(A) RNA polymerase D5, non-canonical |
| chr6_+_29012007 | 0.01 |
ENSRNOT00000085612
|
Atad2b
|
ATPase family, AAA domain containing 2B |
| chr8_+_108958046 | 0.01 |
ENSRNOT00000079618
ENSRNOT00000066917 |
Stag1
|
stromal antigen 1 |
| chr2_+_189169877 | 0.01 |
ENSRNOT00000028225
|
She
|
Src homology 2 domain containing E |
| chrX_-_157095274 | 0.01 |
ENSRNOT00000084088
|
Abcd1
|
ATP binding cassette subfamily D member 1 |
| chr18_-_40716686 | 0.01 |
ENSRNOT00000000172
|
Cdo1
|
cysteine dioxygenase type 1 |
| chr19_+_14352411 | 0.01 |
ENSRNOT00000067519
|
Hmgxb4
|
HMG-box containing 4 |
| chr1_-_260460791 | 0.01 |
ENSRNOT00000018179
|
Tll2
|
tolloid-like 2 |
| chr1_+_78933372 | 0.01 |
ENSRNOT00000029810
|
Ccdc8
|
coiled-coil domain containing 8 |
| chr16_-_54137485 | 0.01 |
ENSRNOT00000014202
|
Pcm1
|
pericentriolar material 1 |
| chr4_-_64831233 | 0.01 |
ENSRNOT00000079285
|
Dgki
|
diacylglycerol kinase, iota |
| chr10_+_83231409 | 0.01 |
ENSRNOT00000006230
|
Spop
|
speckle type BTB/POZ protein |
| chr10_+_105156632 | 0.00 |
ENSRNOT00000086288
|
Galr2
|
galanin receptor 2 |
| chr20_-_1984737 | 0.00 |
ENSRNOT00000040232
ENSRNOT00000051634 ENSRNOT00000079445 |
Gabbr1
|
gamma-aminobutyric acid type B receptor subunit 1 |
| chr17_-_35037076 | 0.00 |
ENSRNOT00000090946
|
Dusp22
|
dual specificity phosphatase 22 |
| chr17_+_11953552 | 0.00 |
ENSRNOT00000090782
|
Ror2
|
receptor tyrosine kinase-like orphan receptor 2 |
| chr8_-_50531423 | 0.00 |
ENSRNOT00000090985
ENSRNOT00000074942 |
Apoc3
|
apolipoprotein C3 |
| chr7_-_77162148 | 0.00 |
ENSRNOT00000008350
|
Klf10
|
Kruppel-like factor 10 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Tfap2e
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:1900224 | positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry(GO:1900224) |
| 0.0 | 0.1 | GO:0021775 | smoothened signaling pathway involved in ventral spinal cord interneuron specification(GO:0021775) smoothened signaling pathway involved in spinal cord motor neuron cell fate specification(GO:0021776) |
| 0.0 | 0.1 | GO:0042414 | epinephrine metabolic process(GO:0042414) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.0 | GO:0034774 | secretory granule lumen(GO:0034774) |