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GSE49485: Hypoxia transcriptome sequencing of rat brain.
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Results for Tfap2d
Z-value: 0.39
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Transcription factors associated with Tfap2d
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Tfap2d | rn6_v1_chr9_+_25304876_25304876 | 0.19 | 7.6e-01 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr1_-_226501920 Show fit | 0.13 |
ENSRNOT00000050716
|
leucine rich repeat containing 10B |
|
| chr8_+_53678777 Show fit | 0.12 |
ENSRNOT00000045944
|
dopamine receptor D2 |
|
| chr1_-_79930263 Show fit | 0.08 |
ENSRNOT00000019219
|
forkhead box A3 |
|
| chr10_-_56403188 Show fit | 0.08 |
ENSRNOT00000019947
|
cholinergic receptor nicotinic beta 1 subunit |
|
| chr10_-_85049331 Show fit | 0.08 |
ENSRNOT00000012538
|
T-box 21 |
|
| chr9_+_99998275 Show fit | 0.06 |
ENSRNOT00000074395
|
glypican 1 |
|
| chr4_-_113610243 Show fit | 0.06 |
ENSRNOT00000008813
|
hexokinase 2 |
|
| chr14_-_81725181 Show fit | 0.06 |
ENSRNOT00000078252
|
cilia and flagella associated protein 99 |
|
| chr13_+_51795867 Show fit | 0.05 |
ENSRNOT00000006747
|
ubiquitin-conjugating enzyme E2T |
|
| chr3_-_171342646 Show fit | 0.05 |
ENSRNOT00000071853
|
prostate transmembrane protein, androgen induced 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Tfap2d
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0051944 | glial cell-derived neurotrophic factor secretion(GO:0044467) positive regulation of neurotransmitter uptake(GO:0051582) positive regulation of dopamine uptake involved in synaptic transmission(GO:0051586) positive regulation of catecholamine uptake involved in synaptic transmission(GO:0051944) negative regulation of dopamine receptor signaling pathway(GO:0060160) regulation of glial cell-derived neurotrophic factor secretion(GO:1900166) positive regulation of glial cell-derived neurotrophic factor secretion(GO:1900168) |
| 0.0 | 0.1 | GO:0030200 | heparan sulfate proteoglycan catabolic process(GO:0030200) |
| 0.0 | 0.1 | GO:0070368 | positive regulation of hepatocyte differentiation(GO:0070368) |
| 0.0 | 0.1 | GO:0035519 | protein K29-linked ubiquitination(GO:0035519) |
| 0.0 | 0.1 | GO:1904925 | positive regulation of macromitophagy(GO:1901526) positive regulation of mitophagy in response to mitochondrial depolarization(GO:1904925) |
| 0.0 | 0.0 | GO:0060994 | regulation of transcription from RNA polymerase II promoter involved in kidney development(GO:0060994) |
| 0.0 | 0.0 | GO:0021589 | hindbrain structural organization(GO:0021577) cerebellum structural organization(GO:0021589) |
| 0.0 | 0.0 | GO:0042322 | negative regulation of circadian sleep/wake cycle, REM sleep(GO:0042322) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0001591 | dopamine neurotransmitter receptor activity, coupled via Gi/Go(GO:0001591) |
| 0.0 | 0.1 | GO:0070052 | collagen V binding(GO:0070052) |