GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Tcf4 Links NCBI RGD Ensembl	ENSRNOG00000012405	transcription factor 4
Mesp1 Links NCBI RGD Ensembl	ENSRNOG00000014951	mesoderm posterior bHLH transcription factor 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Tcf4	rn6_v1_chr18_+_65285318_65285318	-0.35	5.7e-01	Click!
Mesp1	rn6_v1_chr1_-_141533908_141533908	-0.23	7.1e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr12_-_2174131 Show fit	0.79	ENSRNOT00000001313	Pcp2 Links NCBI RGD Ensembl Show fit	Purkinje cell protein 2
chr6_+_33885495 Show fit	0.43	ENSRNOT00000086633	Sdc1 Links NCBI RGD Ensembl Show fit	syndecan 1
chr10_+_59529785 Show fit	0.33	ENSRNOT00000064840 ENSRNOT00000065181	Atp2a3 Links NCBI RGD Ensembl Show fit	ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3
chr7_-_130120579 Show fit	0.28	ENSRNOT00000044376	Mapk12 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase 12
chr5_-_21345805 Show fit	0.28	ENSRNOT00000081296 ENSRNOT00000007802	Car8 Links NCBI RGD Ensembl Show fit	carbonic anhydrase 8
chr16_-_20807070 Show fit	0.27	ENSRNOT00000072536	Comp Links NCBI RGD Ensembl Show fit	cartilage oligomeric matrix protein
chr5_+_154522119 Show fit	0.25	ENSRNOT00000072618	E2f2 Links NCBI RGD Ensembl Show fit	E2F transcription factor 2
chr3_-_9037942 Show fit	0.25	ENSRNOT00000036770	Ier5l Links NCBI RGD Ensembl Show fit	immediate early response 5-like
chr19_-_46167950 Show fit	0.24	ENSRNOT00000071024	AABR07043892.1 Links NCBI RGD Ensembl Show fit
chr3_-_123119460 Show fit	0.24	ENSRNOT00000028833	Avp Links NCBI RGD Ensembl Show fit	arginine vasopressin
chr9_+_16565225 Show fit	0.21	ENSRNOT00000022307	Gnmt Links NCBI RGD Ensembl Show fit	glycine N-methyltransferase
chr9_-_9985630 Show fit	0.21	ENSRNOT00000071780	Crb3 Links NCBI RGD Ensembl Show fit	crumbs 3, cell polarity complex component
chr1_+_221673590 Show fit	0.21	ENSRNOT00000038016	Cdc42bpg Links NCBI RGD Ensembl Show fit	CDC42 binding protein kinase gamma
chr7_-_107634287 Show fit	0.19	ENSRNOT00000093672 ENSRNOT00000087116	Sla Links NCBI RGD Ensembl Show fit	src-like adaptor
chr18_-_3662654 Show fit	0.18	ENSRNOT00000092854 ENSRNOT00000016167	Npc1 Links NCBI RGD Ensembl Show fit	NPC intracellular cholesterol transporter 1
chr19_+_41482728 Show fit	0.18	ENSRNOT00000022943	Calb2 Links NCBI RGD Ensembl Show fit	calbindin 2
chr20_+_40618128 Show fit	0.17	ENSRNOT00000001075 ENSRNOT00000057364	Pkib Links NCBI RGD Ensembl Show fit	cAMP-dependent protein kinase inhibitor beta
chr9_+_84203072 Show fit	0.16	ENSRNOT00000018882	Sgpp2 Links NCBI RGD Ensembl Show fit	sphingosine-1-phosphate phosphatase 2
chr5_+_117052260 Show fit	0.15	ENSRNOT00000010211	Patj Links NCBI RGD Ensembl Show fit	PATJ, crumbs cell polarity complex component
chr16_-_19918644 Show fit	0.15	ENSRNOT00000083345 ENSRNOT00000023926	Plvap Links NCBI RGD Ensembl Show fit	plasmalemma vesicle associated protein
chr10_-_88551056 Show fit	0.15	ENSRNOT00000032737	Zfp385c Links NCBI RGD Ensembl Show fit	zinc finger protein 385C
chr10_+_86399827 Show fit	0.15	ENSRNOT00000009299	Grb7 Links NCBI RGD Ensembl Show fit	growth factor receptor bound protein 7
chr6_-_99783047 Show fit	0.15	ENSRNOT00000009028	Sptb Links NCBI RGD Ensembl Show fit	spectrin, beta, erythrocytic
chr16_-_20888907 Show fit	0.15	ENSRNOT00000027428	Homer3 Links NCBI RGD Ensembl Show fit	homer scaffolding protein 3
chr20_+_5067330 Show fit	0.15	ENSRNOT00000037482	Ly6g6e Links NCBI RGD Ensembl Show fit	lymphocyte antigen 6 complex, locus G6E
chr9_+_16314173 Show fit	0.15	ENSRNOT00000072812	LOC100911564 Links NCBI RGD Ensembl Show fit	glycine N-methyltransferase-like
chr6_-_11494459 Show fit	0.14	ENSRNOT00000021570	Kcnk12 Links NCBI RGD Ensembl Show fit	potassium two pore domain channel subfamily K member 12
chr7_-_123445613 Show fit	0.14	ENSRNOT00000070937	Shisa8 Links NCBI RGD Ensembl Show fit	shisa family member 8
chrX_-_111942749 Show fit	0.14	ENSRNOT00000087583	AABR07040840.1 Links NCBI RGD Ensembl Show fit
chr12_-_48857724 Show fit	0.13	ENSRNOT00000080783	Wscd2 Links NCBI RGD Ensembl Show fit	WSC domain containing 2
chr6_+_3012804 Show fit	0.13	ENSRNOT00000061980	Arhgef33 Links NCBI RGD Ensembl Show fit	Rho guanine nucleotide exchange factor 33
chr14_-_82055290 Show fit	0.13	ENSRNOT00000058062	RGD1560394 Links NCBI RGD Ensembl Show fit	RGD1560394
chrX_-_157286936 Show fit	0.12	ENSRNOT00000078100	Atp2b3 Links NCBI RGD Ensembl Show fit	ATPase plasma membrane Ca2+ transporting 3
chr1_-_264975132 Show fit	0.12	ENSRNOT00000021748	Lbx1 Links NCBI RGD Ensembl Show fit	ladybird homeobox 1
chr20_-_3440769 Show fit	0.12	ENSRNOT00000084981	Ier3 Links NCBI RGD Ensembl Show fit	immediate early response 3
chr13_+_25778317 Show fit	0.12	ENSRNOT00000021129	Tnfrsf11a Links NCBI RGD Ensembl Show fit	TNF receptor superfamily member 11A
chr17_-_84488480 Show fit	0.12	ENSRNOT00000000158 ENSRNOT00000075983	Nebl Links NCBI RGD Ensembl Show fit	nebulette
chr19_-_645937 Show fit	0.12	ENSRNOT00000016521	Car7 Links NCBI RGD Ensembl Show fit	carbonic anhydrase 7
chr7_+_11737293 Show fit	0.12	ENSRNOT00000046059	Lingo3 Links NCBI RGD Ensembl Show fit	leucine rich repeat and Ig domain containing 3
chr4_-_160662974 Show fit	0.12	ENSRNOT00000089199	Tspan9 Links NCBI RGD Ensembl Show fit	tetraspanin 9
chr8_+_57886168 Show fit	0.11	ENSRNOT00000039336	Exph5 Links NCBI RGD Ensembl Show fit	exophilin 5
chr20_+_6351458 Show fit	0.11	ENSRNOT00000091731	Cdkn1a Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase inhibitor 1A
chr15_-_28406046 Show fit	0.11	ENSRNOT00000015418	Zfp219 Links NCBI RGD Ensembl Show fit	zinc finger protein 219
chr12_+_47551935 Show fit	0.11	ENSRNOT00000056932	RGD1560398 Links NCBI RGD Ensembl Show fit	RGD1560398
chr9_-_93735636 Show fit	0.11	ENSRNOT00000025582	Nppc Links NCBI RGD Ensembl Show fit	natriuretic peptide C
chr12_-_16934706 Show fit	0.11	ENSRNOT00000001720	Mafk Links NCBI RGD Ensembl Show fit	MAF bZIP transcription factor K
chrX_-_156155014 Show fit	0.11	ENSRNOT00000088637	LOC102552182 Links NCBI RGD Ensembl Show fit	L antigen family member 3-like
chr1_-_142197182 Show fit	0.10	ENSRNOT00000015521	Furin Links NCBI RGD Ensembl Show fit	furin (paired basic amino acid cleaving enzyme)
chr16_-_59366824 Show fit	0.10	ENSRNOT00000015062	RGD1304810 Links NCBI RGD Ensembl Show fit	similar to 6430573F11Rik protein
chr4_-_82160240 Show fit	0.10	ENSRNOT00000038775 ENSRNOT00000058985	Hoxa4 Links NCBI RGD Ensembl Show fit	homeo box A4
chr19_-_43596801 Show fit	0.10	ENSRNOT00000025625	Fa2h Links NCBI RGD Ensembl Show fit	fatty acid 2-hydroxylase
chr6_-_102196138 Show fit	0.10	ENSRNOT00000014132	Tmem229b Links NCBI RGD Ensembl Show fit	transmembrane protein 229B
chr7_-_101140308 Show fit	0.10	ENSRNOT00000006279	Fam84b Links NCBI RGD Ensembl Show fit	family with sequence similarity 84, member B
chr10_+_47281786 Show fit	0.10	ENSRNOT00000089123	Kcnj12 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily J member 12
chr15_-_30147793 Show fit	0.10	ENSRNOT00000060399	AABR07017693.1 Links NCBI RGD Ensembl Show fit
chr20_-_12352377 Show fit	0.10	ENSRNOT00000044212	Slc19a1 Links NCBI RGD Ensembl Show fit	solute carrier family 19 member 1
chr8_+_73593310 Show fit	0.10	ENSRNOT00000012048	C2cd4b Links NCBI RGD Ensembl Show fit	C2 calcium-dependent domain containing 4B
chr1_-_89539210 Show fit	0.10	ENSRNOT00000077462 ENSRNOT00000028644	Hpn Links NCBI RGD Ensembl Show fit	hepsin
chr1_+_105284753 Show fit	0.09	ENSRNOT00000041950	Slc6a5 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 5
chr20_-_13706205 Show fit	0.09	ENSRNOT00000038623	Derl3 Links NCBI RGD Ensembl Show fit	derlin 3
chr6_-_125027553 Show fit	0.09	ENSRNOT00000005908	Ccdc88c Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 88C
chr8_+_130749838 Show fit	0.09	ENSRNOT00000079273	Snrk Links NCBI RGD Ensembl Show fit	SNF related kinase
chr14_+_16491573 Show fit	0.09	ENSRNOT00000002995	Sowahb Links NCBI RGD Ensembl Show fit	sosondowah ankyrin repeat domain family member B
chr7_+_144647587 Show fit	0.09	ENSRNOT00000022398	Hoxc4 Links NCBI RGD Ensembl Show fit	homeo box C4
chr8_-_108109801 Show fit	0.09	ENSRNOT00000034277	Sox14 Links NCBI RGD Ensembl Show fit	SRY box 14
chr8_-_115167486 Show fit	0.09	ENSRNOT00000033018	Gpr62 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 62
chr3_+_2877293 Show fit	0.09	ENSRNOT00000061855	Lcn5 Links NCBI RGD Ensembl Show fit	lipocalin 5
chr15_+_37806836 Show fit	0.09	ENSRNOT00000076285	Il17d Links NCBI RGD Ensembl Show fit	interleukin 17D
chr9_+_40972089 Show fit	0.09	ENSRNOT00000067928	Ptpn18 Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, non-receptor type 18
chr12_+_52637000 Show fit	0.08	ENSRNOT00000063905	Gtpbp6 Links NCBI RGD Ensembl Show fit	GTP binding protein 6 (putative)
chr6_+_28382962 Show fit	0.08	ENSRNOT00000016976	Pomc Links NCBI RGD Ensembl Show fit	proopiomelanocortin
chr15_-_80713153 Show fit	0.08	ENSRNOT00000063800	Klhl1 Links NCBI RGD Ensembl Show fit	kelch-like family member 1
chr5_+_151776004 Show fit	0.08	ENSRNOT00000009683	Nr0b2 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 0, group B, member 2
chr5_-_152987211 Show fit	0.08	ENSRNOT00000000163	Ldlrap1 Links NCBI RGD Ensembl Show fit	low density lipoprotein receptor adaptor protein 1
chr5_+_139963002 Show fit	0.08	ENSRNOT00000048506	Col9a2 Links NCBI RGD Ensembl Show fit	collagen type IX alpha 2 chain
chr1_+_87224677 Show fit	0.08	ENSRNOT00000028070	Ppp1r14a Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory (inhibitor) subunit 14A
chr18_+_76770012 Show fit	0.08	ENSRNOT00000089389	Pqlc1 Links NCBI RGD Ensembl Show fit	PQ loop repeat containing 1
chr14_+_87312203 Show fit	0.08	ENSRNOT00000088032	Adcy1 Links NCBI RGD Ensembl Show fit	adenylate cyclase 1
chr1_-_124803363 Show fit	0.08	ENSRNOT00000066380	Klf13 Links NCBI RGD Ensembl Show fit	Kruppel-like factor 13
chr13_-_44345735 Show fit	0.08	ENSRNOT00000005006	Tmem163 Links NCBI RGD Ensembl Show fit	transmembrane protein 163
chr3_+_161121697 Show fit	0.08	ENSRNOT00000036020	Wfdc10a Links NCBI RGD Ensembl Show fit	WAP four-disulfide core domain 10A
chr5_-_12541019 Show fit	0.08	ENSRNOT00000091649	St18 Links NCBI RGD Ensembl Show fit	suppression of tumorigenicity 18
chr6_-_109004598 Show fit	0.08	ENSRNOT00000007790	Pgf Links NCBI RGD Ensembl Show fit	placental growth factor
chr17_-_27112820 Show fit	0.08	ENSRNOT00000018359	Bmp6 Links NCBI RGD Ensembl Show fit	bone morphogenetic protein 6
chr15_-_33527031 Show fit	0.08	ENSRNOT00000019979	Homez Links NCBI RGD Ensembl Show fit	homeobox and leucine zipper encoding
chr7_+_140742418 Show fit	0.08	ENSRNOT00000089211	Prph Links NCBI RGD Ensembl Show fit	peripherin
chr16_+_20672374 Show fit	0.07	ENSRNOT00000063780	RGD1566239 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 2810428I15
chr1_-_165680176 Show fit	0.07	ENSRNOT00000025245 ENSRNOT00000082697	Plekhb1 Links NCBI RGD Ensembl Show fit	pleckstrin homology domain containing B1
chr10_+_48240330 Show fit	0.07	ENSRNOT00000057798	Specc1 Links NCBI RGD Ensembl Show fit	sperm antigen with calponin homology and coiled-coil domains 1
chr7_-_130350570 Show fit	0.07	ENSRNOT00000055805	Odf3b Links NCBI RGD Ensembl Show fit	outer dense fiber of sperm tails 3B
chr4_-_123494742 Show fit	0.07	ENSRNOT00000073268	Slc41a3 Links NCBI RGD Ensembl Show fit	solute carrier family 41, member 3
chr9_-_9985358 Show fit	0.07	ENSRNOT00000080856	Crb3 Links NCBI RGD Ensembl Show fit	crumbs 3, cell polarity complex component
chr10_-_88307132 Show fit	0.07	ENSRNOT00000040845	Jup Links NCBI RGD Ensembl Show fit	junction plakoglobin
chr15_+_41069507 Show fit	0.07	ENSRNOT00000018533	C1qtnf9 Links NCBI RGD Ensembl Show fit	C1q and tumor necrosis factor related protein 9
chr1_+_211423022 Show fit	0.07	ENSRNOT00000029587	Dpysl4 Links NCBI RGD Ensembl Show fit	dihydropyrimidinase-like 4
chr1_+_217173199 Show fit	0.07	ENSRNOT00000075078	Shank2 Links NCBI RGD Ensembl Show fit	SH3 and multiple ankyrin repeat domains 2
chr6_-_125723944 Show fit	0.07	ENSRNOT00000007004	Fbln5 Links NCBI RGD Ensembl Show fit	fibulin 5
chr9_-_46401911 Show fit	0.07	ENSRNOT00000046557	Creg2 Links NCBI RGD Ensembl Show fit	cellular repressor of E1A-stimulated genes 2
chr3_+_171037957 Show fit	0.07	ENSRNOT00000008764	Rbm38 Links NCBI RGD Ensembl Show fit	RNA binding motif protein 38
chr4_+_180123905 Show fit	0.07	ENSRNOT00000083173	Rassf8 Links NCBI RGD Ensembl Show fit	Ras association domain family member 8
chr14_+_83724933 Show fit	0.07	ENSRNOT00000029848	Pla2g3 Links NCBI RGD Ensembl Show fit	phospholipase A2, group III
chr1_+_100199057 Show fit	0.07	ENSRNOT00000025831	Klk1 Links NCBI RGD Ensembl Show fit	kallikrein 1
chr1_-_89399039 Show fit	0.07	ENSRNOT00000028585 ENSRNOT00000044678	Lsr Links NCBI RGD Ensembl Show fit	lipolysis stimulated lipoprotein receptor
chr10_-_105116916 Show fit	0.07	ENSRNOT00000012373	Evpl Links NCBI RGD Ensembl Show fit	envoplakin
chr1_-_89068348 Show fit	0.07	ENSRNOT00000033621	Upk1a Links NCBI RGD Ensembl Show fit	uroplakin 1A
chr5_+_169475270 Show fit	0.07	ENSRNOT00000014625	Icmt Links NCBI RGD Ensembl Show fit	isoprenylcysteine carboxyl methyltransferase
chr15_+_30413488 Show fit	0.06	ENSRNOT00000071781	AABR07017733.1 Links NCBI RGD Ensembl Show fit
chr1_+_214328071 Show fit	0.06	ENSRNOT00000024725	Eps8l2 Links NCBI RGD Ensembl Show fit	EPS8-like 2
chr8_-_23390773 Show fit	0.06	ENSRNOT00000019601 ENSRNOT00000071846	Anln Links NCBI RGD Ensembl Show fit	anillin, actin binding protein
chr7_-_12221330 Show fit	0.06	ENSRNOT00000042204	Plk5 Links NCBI RGD Ensembl Show fit	polo-like kinase 5
chr1_+_152072665 Show fit	0.06	ENSRNOT00000022538	Rab38 Links NCBI RGD Ensembl Show fit	RAB38, member RAS oncogene family
chr10_-_82887497 Show fit	0.06	ENSRNOT00000005644	Itga3 Links NCBI RGD Ensembl Show fit	integrin subunit alpha 3
chr14_-_85191557 Show fit	0.06	ENSRNOT00000011604	Nefh Links NCBI RGD Ensembl Show fit	neurofilament heavy
chr12_-_44279002 Show fit	0.06	ENSRNOT00000064900	Fbxo21 Links NCBI RGD Ensembl Show fit	F-box protein 21
chr12_-_11785493 Show fit	0.06	ENSRNOT00000039687	Zfp498 Links NCBI RGD Ensembl Show fit	zinc finger protein 498
chr8_+_5967463 Show fit	0.06	ENSRNOT00000086251	Tmem123 Links NCBI RGD Ensembl Show fit	transmembrane protein 123
chr10_+_66099531 Show fit	0.06	ENSRNOT00000056192	Lyrm9 Links NCBI RGD Ensembl Show fit	LYR motif containing 9
chr17_-_72046381 Show fit	0.06	ENSRNOT00000073919	AABR07028488.1 Links NCBI RGD Ensembl Show fit
chr12_+_52670898 Show fit	0.06	ENSRNOT00000056632	LOC100912590 Links NCBI RGD Ensembl Show fit	putative GTP-binding protein 6-like
chr19_-_25288335 Show fit	0.06	ENSRNOT00000050214	Nanos3 Links NCBI RGD Ensembl Show fit	nanos C2HC-type zinc finger 3
chr1_+_24900858 Show fit	0.06	ENSRNOT00000075616	LOC501467 Links NCBI RGD Ensembl Show fit	similar to spermatogenesis associated glutamate (E)-rich protein 4d
chr5_-_137372524 Show fit	0.06	ENSRNOT00000009061	Tmem125 Links NCBI RGD Ensembl Show fit	transmembrane protein 125
chr20_+_13778178 Show fit	0.06	ENSRNOT00000058314	Gstt4 Links NCBI RGD Ensembl Show fit	glutathione S-transferase, theta 4
chr5_-_134978125 Show fit	0.06	ENSRNOT00000018004	Rad54l Links NCBI RGD Ensembl Show fit	RAD54 like (S. cerevisiae)
chr6_-_125723732 Show fit	0.06	ENSRNOT00000084815	Fbln5 Links NCBI RGD Ensembl Show fit	fibulin 5
chr19_+_16417817 Show fit	0.06	ENSRNOT00000015272	Irx5 Links NCBI RGD Ensembl Show fit	iroquois homeobox 5
chr3_-_11417546 Show fit	0.06	ENSRNOT00000018776	Lcn2 Links NCBI RGD Ensembl Show fit	lipocalin 2
chr14_+_80403001 Show fit	0.06	ENSRNOT00000012109	Cpz Links NCBI RGD Ensembl Show fit	carboxypeptidase Z
chr5_-_12563429 Show fit	0.06	ENSRNOT00000059625	St18 Links NCBI RGD Ensembl Show fit	suppression of tumorigenicity 18
chr1_+_46779860 Show fit	0.06	ENSRNOT00000075268	Snx9 Links NCBI RGD Ensembl Show fit	sorting nexin 9
chr5_-_160620334 Show fit	0.06	ENSRNOT00000019171	Tmem51 Links NCBI RGD Ensembl Show fit	transmembrane protein 51
chr10_-_108691367 Show fit	0.06	ENSRNOT00000005067	Nptx1 Links NCBI RGD Ensembl Show fit	neuronal pentraxin 1
chr7_-_11003785 Show fit	0.06	ENSRNOT00000061279	Tle2 Links NCBI RGD Ensembl Show fit	transducin-like enhancer of split 2
chr10_-_63952726 Show fit	0.06	ENSRNOT00000090461	Doc2b Links NCBI RGD Ensembl Show fit	double C2 domain beta
chr19_+_25123724 Show fit	0.06	ENSRNOT00000007407	LOC686013 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC686013
chrX_+_71272042 Show fit	0.06	ENSRNOT00000076034 ENSRNOT00000076816	Gjb1 Links NCBI RGD Ensembl Show fit	gap junction protein, beta 1
chr3_+_164424515 Show fit	0.06	ENSRNOT00000083876	Cebpb Links NCBI RGD Ensembl Show fit	CCAAT/enhancer binding protein beta
chr8_-_130429132 Show fit	0.06	ENSRNOT00000026261	Hhatl Links NCBI RGD Ensembl Show fit	hedgehog acyltransferase-like
chr9_-_98551410 Show fit	0.06	ENSRNOT00000066346 ENSRNOT00000086678	Hes6 Links NCBI RGD Ensembl Show fit	hes family bHLH transcription factor 6
chr20_-_12351813 Show fit	0.06	ENSRNOT00000065236	Slc19a1 Links NCBI RGD Ensembl Show fit	solute carrier family 19 member 1
chr10_+_40247436 Show fit	0.06	ENSRNOT00000079830	Gpx3 Links NCBI RGD Ensembl Show fit	glutathione peroxidase 3
chr10_-_85938085 Show fit	0.06	ENSRNOT00000043561	Plxdc1 Links NCBI RGD Ensembl Show fit	plexin domain containing 1
chr6_-_28994519 Show fit	0.06	ENSRNOT00000006668	Ubxn2a Links NCBI RGD Ensembl Show fit	UBX domain protein 2A
chr1_+_79727597 Show fit	0.05	ENSRNOT00000034790	AC093995.1 Links NCBI RGD Ensembl Show fit
chr5_-_127273656 Show fit	0.05	ENSRNOT00000057341	Dmrtb1 Links NCBI RGD Ensembl Show fit	DMRT-like family B with proline-rich C-terminal, 1
chr8_+_116771982 Show fit	0.05	ENSRNOT00000083240	AC128059.3 Links NCBI RGD Ensembl Show fit
chr19_+_27835890 Show fit	0.05	ENSRNOT00000042150	LOC100909409 Links NCBI RGD Ensembl Show fit	disks large homolog 5-like
chr15_+_37790141 Show fit	0.05	ENSRNOT00000076392 ENSRNOT00000091953	Il17d Links NCBI RGD Ensembl Show fit	interleukin 17D
chr8_+_50559126 Show fit	0.05	ENSRNOT00000024918	Apoa5 Links NCBI RGD Ensembl Show fit	apolipoprotein A5
chr20_+_4823662 Show fit	0.05	ENSRNOT00000090028	Nfkbil1 Links NCBI RGD Ensembl Show fit	NFKB inhibitor like 1
chr10_+_36099263 Show fit	0.05	ENSRNOT00000083568	Adamts2 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase with thrombospondin type 1 motif, 2
chr10_-_38838272 Show fit	0.05	ENSRNOT00000089495	Sowaha Links NCBI RGD Ensembl Show fit	sosondowah ankyrin repeat domain family member A
chr11_+_71872830 Show fit	0.05	ENSRNOT00000050364	Nrros Links NCBI RGD Ensembl Show fit	negative regulator of reactive oxygen species
chr10_-_91291774 Show fit	0.05	ENSRNOT00000004356	LOC100361655 Links NCBI RGD Ensembl Show fit	rCG33642-like
chrX_-_123662350 Show fit	0.05	ENSRNOT00000092624	Sept6 Links NCBI RGD Ensembl Show fit	septin 6
chr9_+_10339075 Show fit	0.05	ENSRNOT00000073402	Vmac Links NCBI RGD Ensembl Show fit	vimentin-type intermediate filament associated coiled-coil protein
chr4_+_87026530 Show fit	0.05	ENSRNOT00000018425	Avl9 Links NCBI RGD Ensembl Show fit	AVL9 cell migration associated
chr1_-_88558387 Show fit	0.05	ENSRNOT00000074174	AABR07002896.1 Links NCBI RGD Ensembl Show fit
chr19_+_209926 Show fit	0.05	ENSRNOT00000071393	LOC108348293 Links NCBI RGD Ensembl Show fit	uncharacterized LOC108348293
chr12_-_23841049 Show fit	0.05	ENSRNOT00000031555	Hspb1 Links NCBI RGD Ensembl Show fit	heat shock protein family B (small) member 1
chr8_-_116349896 Show fit	0.05	ENSRNOT00000087306	Lsmem2 Links NCBI RGD Ensembl Show fit	leucine-rich single-pass membrane protein 2
chr13_-_51183269 Show fit	0.05	ENSRNOT00000039540	Ppfia4 Links NCBI RGD Ensembl Show fit	PTPRF interacting protein alpha 4
chr7_+_141370491 Show fit	0.05	ENSRNOT00000087662	Gpd1 Links NCBI RGD Ensembl Show fit	glycerol-3-phosphate dehydrogenase 1
chr20_-_3819200 Show fit	0.05	ENSRNOT00000000542 ENSRNOT00000081486	Hsd17b8 Links NCBI RGD Ensembl Show fit	hydroxysteroid (17-beta) dehydrogenase 8
chr7_-_11018160 Show fit	0.05	ENSRNOT00000092061	Aes Links NCBI RGD Ensembl Show fit	amino-terminal enhancer of split
chr6_+_108285822 Show fit	0.05	ENSRNOT00000015889	Vsx2 Links NCBI RGD Ensembl Show fit	visual system homeobox 2
chr5_+_137371825 Show fit	0.05	ENSRNOT00000072816	Tmem125 Links NCBI RGD Ensembl Show fit	transmembrane protein 125
chr2_+_225827504 Show fit	0.05	ENSRNOT00000018343	Gclm Links NCBI RGD Ensembl Show fit	glutamate cysteine ligase, modifier subunit
chr4_-_30556814 Show fit	0.05	ENSRNOT00000012760	Pdk4 Links NCBI RGD Ensembl Show fit	pyruvate dehydrogenase kinase 4
chr1_-_277768368 Show fit	0.05	ENSRNOT00000023113	Afap1l2 Links NCBI RGD Ensembl Show fit	actin filament associated protein 1-like 2
chr1_+_221792221 Show fit	0.05	ENSRNOT00000054828	Nrxn2 Links NCBI RGD Ensembl Show fit	neurexin 2
chr1_+_214440503 Show fit	0.05	ENSRNOT00000025964	Cracr2b Links NCBI RGD Ensembl Show fit	calcium release activated channel regulator 2B
chr1_-_222118459 Show fit	0.05	ENSRNOT00000067217	Ccdc88b Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 88B
chr1_-_87221826 Show fit	0.05	ENSRNOT00000046611 ENSRNOT00000028006	Spint2 Links NCBI RGD Ensembl Show fit	serine peptidase inhibitor, Kunitz type, 2
chr1_-_255815733 Show fit	0.05	ENSRNOT00000047387	Cpeb3 Links NCBI RGD Ensembl Show fit	cytoplasmic polyadenylation element binding protein 3
chr5_+_169452493 Show fit	0.05	ENSRNOT00000014444	Gpr153 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 153
chr1_-_242765807 Show fit	0.05	ENSRNOT00000020763	Pgm5 Links NCBI RGD Ensembl Show fit	phosphoglucomutase 5
chr1_-_216156409 Show fit	0.05	ENSRNOT00000027688	Ascl2 Links NCBI RGD Ensembl Show fit	achaete-scute family bHLH transcription factor 2
chr7_-_98960736 Show fit	0.05	ENSRNOT00000011984 ENSRNOT00000080155	Mtss1 Links NCBI RGD Ensembl Show fit	MTSS1, I-BAR domain containing
chr6_+_110410141 Show fit	0.05	ENSRNOT00000013867	Esrrb Links NCBI RGD Ensembl Show fit	estrogen-related receptor beta
chr4_-_31730386 Show fit	0.05	ENSRNOT00000013817	Slc25a13 Links NCBI RGD Ensembl Show fit	solute carrier family 25 member 13
chr3_+_11593655 Show fit	0.05	ENSRNOT00000074122	Pip5kl1 Links NCBI RGD Ensembl Show fit	phosphatidylinositol-4-phosphate 5-kinase-like 1
chr1_-_72366455 Show fit	0.05	ENSRNOT00000031786	LOC100911196 Links NCBI RGD Ensembl Show fit	zinc finger protein 865-like
chr12_+_41385241 Show fit	0.05	ENSRNOT00000074974	Dtx1 Links NCBI RGD Ensembl Show fit	deltex E3 ubiquitin ligase 1
chr12_+_18074033 Show fit	0.05	ENSRNOT00000001727	LOC103689975 Links NCBI RGD Ensembl Show fit	integrator complex subunit 1-like
chr1_-_165891627 Show fit	0.05	ENSRNOT00000038408	Relt Links NCBI RGD Ensembl Show fit	RELT tumor necrosis factor receptor
chr19_-_26053762 Show fit	0.05	ENSRNOT00000004646	MAST1 Links NCBI RGD Ensembl Show fit	microtubule associated serine/threonine kinase 1
chr20_-_3386048 Show fit	0.05	ENSRNOT00000089550 ENSRNOT00000065025	Dhx16 Links NCBI RGD Ensembl Show fit	DEAH-box helicase 16
chr18_+_38847632 Show fit	0.05	ENSRNOT00000014916	LOC102554034 Links NCBI RGD Ensembl Show fit	ELMO domain-containing protein 2-like
chr15_+_24153602 Show fit	0.05	ENSRNOT00000014216	Lgals3 Links NCBI RGD Ensembl Show fit	galectin 3
chr4_+_156752082 Show fit	0.05	ENSRNOT00000084588 ENSRNOT00000068407	Cd163 Links NCBI RGD Ensembl Show fit	CD163 molecule
chr11_+_47200029 Show fit	0.05	ENSRNOT00000079598	Nxpe3 Links NCBI RGD Ensembl Show fit	neurexophilin and PC-esterase domain family, member 3
chr4_+_155313671 Show fit	0.04	ENSRNOT00000020812	Mfap5 Links NCBI RGD Ensembl Show fit	microfibrillar associated protein 5
chr5_+_103479767 Show fit	0.04	ENSRNOT00000008999	Sh3gl2 Links NCBI RGD Ensembl Show fit	SH3 domain-containing GRB2-like 2
chr8_-_22974321 Show fit	0.04	ENSRNOT00000017369	Epor Links NCBI RGD Ensembl Show fit	erythropoietin receptor
chr4_-_183293999 Show fit	0.04	ENSRNOT00000079695	Ipo8 Links NCBI RGD Ensembl Show fit	importin 8
chr12_-_40227297 Show fit	0.04	ENSRNOT00000030600	Fam109a Links NCBI RGD Ensembl Show fit	family with sequence similarity 109, member A
chr5_+_28480023 Show fit	0.04	ENSRNOT00000075067 ENSRNOT00000093754	LOC100912373 Links NCBI RGD Ensembl Show fit	uncharacterized LOC100912373
chr4_+_7355574 Show fit	0.04	ENSRNOT00000013800	Kcnh2 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily H member 2
chr17_+_15845931 Show fit	0.04	ENSRNOT00000092083	Card19 Links NCBI RGD Ensembl Show fit	caspase recruitment domain family, member 19

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.8	GO:0016056	rhodopsin mediated signaling pathway(GO:0016056)
0.1	0.4	GO:1903553	positive regulation of extracellular exosome assembly(GO:1903553)
0.1	0.3	GO:0032849	positive regulation of cellular pH reduction(GO:0032849)
0.1	0.2	GO:0051958	methotrexate transport(GO:0051958)
0.0	0.1	GO:0032900	negative regulation of neurotrophin production(GO:0032900)
0.0	0.1	GO:0071847	TNFSF11-mediated signaling pathway(GO:0071847)
0.0	0.3	GO:1990086	lens fiber cell apoptotic process(GO:1990086)
0.0	0.1	GO:0034769	basement membrane disassembly(GO:0034769)
0.0	0.1	GO:0071691	cardiac muscle thin filament assembly(GO:0071691)
0.0	0.0	GO:0006667	sphinganine metabolic process(GO:0006667)
0.0	0.1	GO:1990792	response to glial cell derived neurotrophic factor(GO:1990790) cellular response to glial cell derived neurotrophic factor(GO:1990792)
0.0	0.2	GO:0046655	folic acid metabolic process(GO:0046655)
0.0	0.1	GO:0003419	growth plate cartilage chondrocyte proliferation(GO:0003419)
0.0	0.1	GO:0002159	desmosome assembly(GO:0002159)
0.0	0.1	GO:1903769	negative regulation of cell proliferation in bone marrow(GO:1903769)
0.0	0.1	GO:0071348	cellular response to interleukin-11(GO:0071348)
0.0	0.1	GO:0090118	receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport(GO:0090118)
0.0	0.1	GO:0033693	neurofilament bundle assembly(GO:0033693)
0.0	0.1	GO:0001983	baroreceptor response to increased systemic arterial blood pressure(GO:0001983)
0.0	0.2	GO:2000189	positive regulation of cholesterol homeostasis(GO:2000189)
0.0	0.1	GO:0015688	iron chelate transport(GO:0015688) siderophore transport(GO:0015891)
0.0	0.1	GO:0019375	galactosylceramide biosynthetic process(GO:0006682) galactolipid biosynthetic process(GO:0019375)
0.0	0.1	GO:0060988	lipid tube assembly(GO:0060988)
0.0	0.1	GO:0032349	positive regulation of aldosterone metabolic process(GO:0032346) positive regulation of aldosterone biosynthetic process(GO:0032349)
0.0	0.1	GO:0036233	glycine import(GO:0036233)
0.0	0.1	GO:0035711	granuloma formation(GO:0002432) T-helper 1 cell activation(GO:0035711)
0.0	0.0	GO:0046340	diacylglycerol catabolic process(GO:0046340)
0.0	0.1	GO:0097089	methyl-branched fatty acid metabolic process(GO:0097089)
0.0	0.1	GO:0060574	intestinal epithelial cell maturation(GO:0060574)
0.0	0.1	GO:1990034	calcium ion export from cell(GO:1990034)
0.0	0.2	GO:0048251	elastic fiber assembly(GO:0048251)
0.0	0.1	GO:0032286	central nervous system myelin maintenance(GO:0032286)
0.0	0.1	GO:1904694	negative regulation of vascular smooth muscle contraction(GO:1904694)
0.0	0.1	GO:0034334	adherens junction maintenance(GO:0034334)
0.0	0.0	GO:0071663	granzyme B production(GO:0071613) regulation of granzyme B production(GO:0071661) positive regulation of granzyme B production(GO:0071663)
0.0	0.0	GO:0060671	epithelial cell differentiation involved in embryonic placenta development(GO:0060671) epithelial cell morphogenesis involved in placental branching(GO:0060672)
0.0	0.0	GO:1901382	chorionic trophoblast cell proliferation(GO:0097360) regulation of chorionic trophoblast cell proliferation(GO:1901382)
0.0	0.1	GO:0090521	glomerular visceral epithelial cell migration(GO:0090521)
0.0	0.1	GO:0060155	platelet dense granule organization(GO:0060155)
0.0	0.0	GO:0001831	trophectodermal cellular morphogenesis(GO:0001831)
0.0	0.0	GO:1904373	response to kainic acid(GO:1904373)
0.0	0.0	GO:2000019	negative regulation of male gonad development(GO:2000019)
0.0	0.0	GO:1902303	negative regulation of potassium ion export(GO:1902303)
0.0	0.2	GO:2000480	negative regulation of cAMP-dependent protein kinase activity(GO:2000480)
0.0	0.0	GO:0021905	pancreatic A cell development(GO:0003322) forebrain-midbrain boundary formation(GO:0021905) somatic motor neuron fate commitment(GO:0021917) regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment(GO:0021918) sensory neuron migration(GO:1904937)
0.0	0.0	GO:0031439	positive regulation of mRNA cleavage(GO:0031439) positive regulation of endoribonuclease activity(GO:1902380) positive regulation of mRNA endonucleolytic cleavage involved in unfolded protein response(GO:1904722)
0.0	0.2	GO:0003417	growth plate cartilage development(GO:0003417)
0.0	0.0	GO:0018101	protein citrullination(GO:0018101) histone citrullination(GO:0036414)
0.0	0.1	GO:1903059	regulation of protein lipidation(GO:1903059)
0.0	0.1	GO:0010901	regulation of very-low-density lipoprotein particle remodeling(GO:0010901)
0.0	0.1	GO:0097069	cellular response to thyroxine stimulus(GO:0097069)
0.0	0.1	GO:0042985	negative regulation of amyloid precursor protein biosynthetic process(GO:0042985)
0.0	0.2	GO:0006670	sphingosine metabolic process(GO:0006670)
0.0	0.1	GO:0010626	negative regulation of Schwann cell proliferation(GO:0010626)
0.0	0.1	GO:1901029	negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway(GO:1901029)
0.0	0.0	GO:0032377	regulation of intracellular lipid transport(GO:0032377) regulation of intracellular sterol transport(GO:0032380) regulation of intracellular cholesterol transport(GO:0032383)
0.0	0.0	GO:0045900	negative regulation of translational elongation(GO:0045900)
0.0	0.1	GO:0090031	positive regulation of steroid hormone biosynthetic process(GO:0090031)
0.0	0.0	GO:0036135	Schwann cell migration(GO:0036135) regulation of Schwann cell migration(GO:1900147)
0.0	0.0	GO:0043490	malate-aspartate shuttle(GO:0043490)
0.0	0.0	GO:0042126	nitrate metabolic process(GO:0042126)
0.0	0.1	GO:0034063	stress granule assembly(GO:0034063)
0.0	0.0	GO:0032423	regulation of mismatch repair(GO:0032423)
0.0	0.0	GO:2000820	negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000820)
0.0	0.0	GO:1900220	semaphorin-plexin signaling pathway involved in bone trabecula morphogenesis(GO:1900220)
0.0	0.0	GO:0021550	medulla oblongata development(GO:0021550)
0.0	0.1	GO:0060754	positive regulation of mast cell chemotaxis(GO:0060754)
0.0	0.0	GO:0006116	NADH oxidation(GO:0006116)
0.0	0.1	GO:0060040	retinal bipolar neuron differentiation(GO:0060040)
0.0	0.1	GO:0006642	triglyceride mobilization(GO:0006642)
0.0	0.1	GO:0048664	neuron fate determination(GO:0048664)
0.0	0.1	GO:0002098	tRNA wobble uridine modification(GO:0002098)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0070557	PCNA-p21 complex(GO:0070557)
0.0	0.1	GO:0071953	elastic fiber(GO:0071953)
0.0	0.1	GO:0005594	collagen type IX trimer(GO:0005594)
0.0	0.1	GO:0071664	catenin-TCF7L2 complex(GO:0071664)
0.0	0.1	GO:0061689	tricellular tight junction(GO:0061689)
0.0	0.1	GO:0045098	type III intermediate filament(GO:0045098)
0.0	0.1	GO:0032173	septin collar(GO:0032173)
0.0	0.1	GO:0030121	AP-1 adaptor complex(GO:0030121)
0.0	0.1	GO:0034667	integrin alpha3-beta1 complex(GO:0034667)
0.0	0.0	GO:0036488	CHOP-C/EBP complex(GO:0036488)
0.0	0.2	GO:0008091	spectrin(GO:0008091)
0.0	0.1	GO:1990761	growth cone lamellipodium(GO:1990761) growth cone filopodium(GO:1990812)
0.0	0.1	GO:0031592	centrosomal corona(GO:0031592)
0.0	0.1	GO:0005785	signal recognition particle receptor complex(GO:0005785)
0.0	0.0	GO:0002947	tumor necrosis factor receptor superfamily complex(GO:0002947)
0.0	0.1	GO:0033269	internode region of axon(GO:0033269)
0.0	0.1	GO:0031904	endosome lumen(GO:0031904)
0.0	0.1	GO:0009331	glycerol-3-phosphate dehydrogenase complex(GO:0009331)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0031893	vasopressin receptor binding(GO:0031893)
0.1	0.2	GO:0098603	selenol Se-methyltransferase activity(GO:0098603)
0.1	0.3	GO:0005499	vitamin D binding(GO:0005499)
0.1	0.2	GO:0042392	sphingosine-1-phosphate phosphatase activity(GO:0042392)
0.1	0.2	GO:0015350	methotrexate transporter activity(GO:0015350)
0.0	0.1	GO:0019912	cyclin-dependent protein kinase activating kinase activity(GO:0019912)
0.0	0.1	GO:0071535	RING-like zinc finger domain binding(GO:0071535)
0.0	0.1	GO:0016300	tRNA (uracil) methyltransferase activity(GO:0016300)
0.0	0.1	GO:0005294	neutral L-amino acid secondary active transmembrane transporter activity(GO:0005294)
0.0	0.1	GO:0070996	type 1 melanocortin receptor binding(GO:0070996)
0.0	0.1	GO:0035651	AP-3 adaptor complex binding(GO:0035651)
0.0	0.5	GO:0005388	calcium-transporting ATPase activity(GO:0005388)
0.0	0.3	GO:0004089	carbonate dehydratase activity(GO:0004089)
0.0	0.1	GO:0060230	lipoprotein lipase activator activity(GO:0060230)
0.0	0.1	GO:0034988	Fc-gamma receptor I complex binding(GO:0034988)
0.0	0.1	GO:0004726	non-membrane spanning protein tyrosine phosphatase activity(GO:0004726)
0.0	0.1	GO:0047025	3-oxoacyl-[acyl-carrier-protein] reductase (NADH) activity(GO:0047025)
0.0	0.0	GO:0031249	denatured protein binding(GO:0031249)
0.0	0.0	GO:0004668	protein-arginine deiminase activity(GO:0004668)
0.0	0.1	GO:0008294	calcium- and calmodulin-responsive adenylate cyclase activity(GO:0008294)
0.0	0.2	GO:0004862	cAMP-dependent protein kinase inhibitor activity(GO:0004862)
0.0	0.0	GO:0004605	phosphatidate cytidylyltransferase activity(GO:0004605)
0.0	0.1	GO:0048406	nerve growth factor binding(GO:0048406)
0.0	0.1	GO:0004368	glycerol-3-phosphate dehydrogenase activity(GO:0004368)
0.0	0.1	GO:0044729	hemi-methylated DNA-binding(GO:0044729)
0.0	0.1	GO:0035615	clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0	0.0	GO:0008489	UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity(GO:0008489)
0.0	0.1	GO:0070008	serine-type exopeptidase activity(GO:0070008)
0.0	0.2	GO:0031005	filamin binding(GO:0031005)
0.0	0.0	GO:0004956	prostaglandin D receptor activity(GO:0004956)
0.0	0.1	GO:0015245	fatty acid transporter activity(GO:0015245)
0.0	0.0	GO:0005148	prolactin receptor binding(GO:0005148)
0.0	0.0	GO:0051377	mannose-ethanolamine phosphotransferase activity(GO:0051377)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	PID INTEGRIN5 PATHWAY	Beta5 beta6 beta7 and beta8 integrin cell surface interactions
0.0	0.2	PID P38 GAMMA DELTA PATHWAY	Signaling mediated by p38-gamma and p38-delta
0.0	0.4	SA G1 AND S PHASES	Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.6	REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT	Genes involved in Chylomicron-mediated lipid transport
0.0	0.5	REACTOME PRE NOTCH PROCESSING IN GOLGI	Genes involved in Pre-NOTCH Processing in Golgi
0.0	0.2	REACTOME TRANSPORT OF ORGANIC ANIONS	Genes involved in Transport of organic anions
0.0	0.3	REACTOME P38MAPK EVENTS	Genes involved in p38MAPK events
0.0	0.2	REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX	Genes involved in CDC6 association with the ORC:origin complex
0.0	0.1	REACTOME ANDROGEN BIOSYNTHESIS	Genes involved in Androgen biosynthesis
0.0	0.4	REACTOME TIGHT JUNCTION INTERACTIONS	Genes involved in Tight junction interactions