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GSE49485: Hypoxia transcriptome sequencing of rat brain.
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Results for Stat6
Z-value: 0.39
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Transcription factors associated with Stat6
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Stat6 | rn6_v1_chr7_+_70946228_70946228 | 0.90 | 3.9e-02 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr2_-_173087648 Show fit | 0.17 |
ENSRNOT00000091079
|
IQ motif containing J |
|
| chr5_-_138697641 Show fit | 0.15 |
ENSRNOT00000012062
|
guanylate cyclase activator 2B |
|
| chr4_-_22425381 Show fit | 0.13 |
ENSRNOT00000011166
ENSRNOT00000037712 |
ATP binding cassette subfamily B member 1A |
|
| chr18_+_30913842 Show fit | 0.13 |
ENSRNOT00000026947
|
protocadherin gamma subfamily C, 3 |
|
| chr3_+_110723481 Show fit | 0.13 |
ENSRNOT00000013878
|
bromo adjacent homology domain containing 1 |
|
| chr13_-_109580271 Show fit | 0.12 |
ENSRNOT00000088326
|
feline leukemia virus subgroup C cellular receptor 1 |
|
| chr5_-_166116516 Show fit | 0.12 |
ENSRNOT00000079919
ENSRNOT00000080888 |
kinesin family member 1B |
|
| chr3_-_158328881 Show fit | 0.12 |
ENSRNOT00000044466
|
protein tyrosine phosphatase, receptor type, T |
|
| chr9_+_111028824 Show fit | 0.11 |
ENSRNOT00000041418
ENSRNOT00000056457 |
peptidylglycine alpha-amidating monooxygenase |
|
| chr15_+_83703791 Show fit | 0.11 |
ENSRNOT00000090637
|
Kruppel-like factor 5 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Stat6
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:2001025 | positive regulation of response to drug(GO:2001025) |
| 0.0 | 0.1 | GO:0044778 | meiotic DNA integrity checkpoint(GO:0044778) |
| 0.0 | 0.1 | GO:0031179 | peptide modification(GO:0031179) |
| 0.0 | 0.1 | GO:1900368 | regulation of RNA interference(GO:1900368) |
| 0.0 | 0.1 | GO:1901421 | positive regulation of response to alcohol(GO:1901421) |
| 0.0 | 0.1 | GO:0019521 | aldonic acid metabolic process(GO:0019520) D-gluconate metabolic process(GO:0019521) |
| 0.0 | 0.1 | GO:0060066 | oviduct development(GO:0060066) |
| 0.0 | 0.1 | GO:0071921 | establishment of sister chromatid cohesion(GO:0034085) cohesin loading(GO:0071921) regulation of cohesin loading(GO:0071922) |
| 0.0 | 0.1 | GO:0032687 | negative regulation of interferon-alpha production(GO:0032687) |
| 0.0 | 0.1 | GO:0001915 | negative regulation of T cell mediated cytotoxicity(GO:0001915) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0030896 | checkpoint clamp complex(GO:0030896) |
| 0.0 | 0.1 | GO:0044530 | supraspliceosomal complex(GO:0044530) |
| 0.0 | 0.1 | GO:0005677 | chromatin silencing complex(GO:0005677) |
| 0.0 | 0.1 | GO:0071821 | FANCM-MHF complex(GO:0071821) |
| 0.0 | 0.1 | GO:0046581 | intercellular canaliculus(GO:0046581) |
| 0.0 | 0.1 | GO:0016012 | sarcoglycan complex(GO:0016012) |
| 0.0 | 0.1 | GO:0005964 | phosphorylase kinase complex(GO:0005964) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0045294 | alpha-catenin binding(GO:0045294) |
| 0.0 | 0.1 | GO:0016842 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen(GO:0016715) amidine-lyase activity(GO:0016842) |
| 0.0 | 0.1 | GO:0090555 | phosphatidylethanolamine-translocating ATPase activity(GO:0090555) |
| 0.0 | 0.1 | GO:0030250 | cyclase activator activity(GO:0010853) guanylate cyclase activator activity(GO:0030250) |
| 0.0 | 0.1 | GO:0003726 | double-stranded RNA adenosine deaminase activity(GO:0003726) |
| 0.0 | 0.1 | GO:0004616 | phosphogluconate dehydrogenase (decarboxylating) activity(GO:0004616) |
| 0.0 | 0.1 | GO:0005219 | ryanodine-sensitive calcium-release channel activity(GO:0005219) |
| 0.0 | 0.1 | GO:0045322 | unmethylated CpG binding(GO:0045322) |
| 0.0 | 0.1 | GO:0008503 | benzodiazepine receptor activity(GO:0008503) |
| 0.0 | 0.1 | GO:0015232 | heme transporter activity(GO:0015232) |