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GSE49485: Hypoxia transcriptome sequencing of rat brain.

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Results for Spdef

Z-value: 0.34

Motif logo

Transcription factors associated with Spdef

Gene Symbol Gene ID Gene Info
ENSRNOG00000000491 SAM pointed domain containing ets transcription factor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Spdefrn6_v1_chr20_-_7307280_73072840.731.6e-01Click!

Activity profile of Spdef motif

Sorted Z-values of Spdef motif

Promoter Log-likelihood Transcript Gene Gene Info
chr10_-_40657861 0.14 ENSRNOT00000058665
FAT atypical cadherin 2
chr8_+_49354115 0.09 ENSRNOT00000032837
myelin protein zero-like 3
chr5_+_154522119 0.07 ENSRNOT00000072618
E2F transcription factor 2
chr9_+_92435896 0.07 ENSRNOT00000022901
F-box protein 36
chr19_-_37528011 0.07 ENSRNOT00000059628
agouti related neuropeptide
chr4_+_28989115 0.06 ENSRNOT00000075326
G protein subunit gamma 11
chr4_+_31387420 0.05 ENSRNOT00000074048
guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11-like
chrX_+_128897181 0.05 ENSRNOT00000008444
SH2 domain containing 1A
chr8_+_49378644 0.05 ENSRNOT00000007588
junction adhesion molecule like
chr8_-_45375435 0.05 ENSRNOT00000010873
ubiquitin associated and SH3 domain containing, B
chr3_+_151688454 0.05 ENSRNOT00000026856
reactive oxygen species modulator 1
chr13_+_89774764 0.05 ENSRNOT00000005619
Rho GTPase activating protein 30
chrX_+_71155894 0.05 ENSRNOT00000076479
forkhead box O4
chr1_+_199217016 0.04 ENSRNOT00000025732
ORAI calcium release-activated calcium modulator 3
chr10_+_47930633 0.04 ENSRNOT00000003515
GRB2-related adaptor protein
chr19_+_45938915 0.04 ENSRNOT00000065508
MON1 homolog B, secretory trafficking associated
chr1_-_261179790 0.04 ENSRNOT00000074420
ENSRNOT00000072073
exosome component 1
chr8_-_71533069 0.04 ENSRNOT00000021863
thyroid hormone receptor interactor 4
chr1_-_219682287 0.04 ENSRNOT00000026092
ras homolog family member D
chr2_-_189602143 0.04 ENSRNOT00000032062
cAMP responsive element binding protein 3-like 4
chr3_-_111037425 0.04 ENSRNOT00000085628
protein phosphatase 1, regulatory (inhibitor) subunit 14D
chr4_+_66091641 0.04 ENSRNOT00000043147

chr16_-_2367253 0.03 ENSRNOT00000083573
phosphodiesterase 12
chr3_+_63536166 0.03 ENSRNOT00000016132
pleckstrin homology domain containing A3
chr20_+_2094931 0.03 ENSRNOT00000001013
protein phosphatase 1, regulatory (inhibitor) subunit 11
chr16_+_27399467 0.03 ENSRNOT00000065642
tolloid-like 1
chr10_+_5352933 0.03 ENSRNOT00000003465
tektin 5
chr16_+_21178138 0.03 ENSRNOT00000027943
GATA zinc finger domain containing 2A
chr5_-_16706909 0.03 ENSRNOT00000011314
ribosomal protein S20
chr6_+_2969333 0.03 ENSRNOT00000047356
MORN repeat containing 2
chr3_-_164239250 0.03 ENSRNOT00000012604
spermatogenesis associated 2
chr1_+_12823363 0.03 ENSRNOT00000086790
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
chr10_-_45851984 0.03 ENSRNOT00000058308
zinc finger protein 496
chr10_-_86890257 0.03 ENSRNOT00000084275
gap junction protein, delta 3
chrX_-_71127237 0.03 ENSRNOT00000076403
ENSRNOT00000076635
ENSRNOT00000068098
sorting nexin 12
chr8_-_55171718 0.03 ENSRNOT00000080736
hypothetical protein LOC689959
chr8_+_62696720 0.03 ENSRNOT00000010083
ubiquitin-like 7
chr10_-_30118873 0.03 ENSRNOT00000006063
ubiquitin-like domain containing CTD phosphatase 1
chr8_-_71533459 0.02 ENSRNOT00000085745
thyroid hormone receptor interactor 4
chr10_-_40764185 0.02 ENSRNOT00000017486
secreted protein acidic and cysteine rich
chr20_+_9948908 0.02 ENSRNOT00000001541
ubiquitin associated and SH3 domain containing, A
chr17_-_75886523 0.02 ENSRNOT00000046266
USP6 N-terminal like
chr6_+_109939345 0.02 ENSRNOT00000013560
intraflagellar transport 43
chr16_-_2367069 0.02 ENSRNOT00000079625
phosphodiesterase 12
chr3_-_159802952 0.02 ENSRNOT00000011610
oxidative stress responsive serine-rich 1
chr1_-_81193729 0.02 ENSRNOT00000026268
tescalcin-like
chr2_+_225827504 0.02 ENSRNOT00000018343
glutamate cysteine ligase, modifier subunit
chr19_+_44164935 0.02 ENSRNOT00000048998
GABA type A receptor associated protein like 2
chr16_+_18975746 0.02 ENSRNOT00000066121
small integral membrane protein 7
chr10_-_82197848 0.02 ENSRNOT00000081307
calcium voltage-gated channel subunit alpha1 G
chr10_-_82197520 0.02 ENSRNOT00000092024
calcium voltage-gated channel subunit alpha1 G
chr7_-_60825242 0.02 ENSRNOT00000009203
nucleoporin 107
chr3_-_63535991 0.02 ENSRNOT00000015722
FK506 binding protein 7
chr7_-_36408588 0.02 ENSRNOT00000063946
CASP2 and RIPK1 domain containing adaptor with death domain
chr8_+_133210473 0.02 ENSRNOT00000082774
chemokine (C-C motif) receptor 5
chr13_+_56513286 0.02 ENSRNOT00000015596
zinc finger and BTB domain containing 41
chr11_-_4332255 0.02 ENSRNOT00000087133
cell adhesion molecule 2
chr1_+_85386470 0.02 ENSRNOT00000093332
ENSRNOT00000044326
pleckstrin homology and RhoGEF domain containing G2
chr7_+_28715300 0.02 ENSRNOT00000006760
ENSRNOT00000089161
nucleoporin 37
chr9_+_90880614 0.02 ENSRNOT00000077859
ENSRNOT00000020705
ENSRNOT00000089142
mitochondrial fission factor
chr15_-_32888095 0.02 ENSRNOT00000012233
defender against cell death 1
chr3_-_122703705 0.02 ENSRNOT00000079923
ENSRNOT00000049857
small nuclear ribonucleoprotein polypeptides B and B1
chr20_+_27954433 0.02 ENSRNOT00000064288
LIM zinc finger domain containing 1
chr6_+_26836216 0.02 ENSRNOT00000077903
ENSRNOT00000011373
oligosaccharyltransferase complex subunit 4, non-catalytic
chr17_+_66446569 0.02 ENSRNOT00000070825
HEAT repeat containing 1
chr4_+_140247313 0.02 ENSRNOT00000040255
ENSRNOT00000064025
ENSRNOT00000041130
ENSRNOT00000043646
inositol 1,4,5-trisphosphate receptor, type 1
chr15_-_34352673 0.02 ENSRNOT00000064916
neural precursor cell expressed, developmentally down-regulated 8
chr18_-_40586260 0.02 ENSRNOT00000004942
transmembrane p24 trafficking protein 7
chr11_+_46184871 0.02 ENSRNOT00000048417
Trk-fused gene
chr5_-_139749050 0.02 ENSRNOT00000056651
nuclear transcription factor Y subunit gamma
chr14_+_104475082 0.02 ENSRNOT00000084481
RAB1A, member RAS oncogene family
chr8_-_64154396 0.02 ENSRNOT00000031262
Bardet-Biedl syndrome 4
chr3_+_45277348 0.02 ENSRNOT00000059246
plakophilin 4
chr17_+_47397558 0.02 ENSRNOT00000085923
ependymin related 1
chr5_+_150459713 0.02 ENSRNOT00000081681
ENSRNOT00000074251
TATA-box binding protein associated factor 12
chr10_+_43768708 0.02 ENSRNOT00000086218
SH3 binding domain protein 5 like
chr5_+_5215196 0.02 ENSRNOT00000010481
translocation associated membrane protein 1
chr1_+_23977688 0.02 ENSRNOT00000014805
TATA-box binding protein like 1
chr7_-_132984110 0.02 ENSRNOT00000046626
high mobility group box 1, pseudogene 3
chr6_+_12253788 0.02 ENSRNOT00000061675
protein phosphatase 1, regulatory subunit 21
chr1_+_13595295 0.02 ENSRNOT00000079250
NHS-like 1
chr5_-_150704117 0.02 ENSRNOT00000067455
sestrin 2
chr10_+_55924938 0.02 ENSRNOT00000087003
ENSRNOT00000057079
trafficking protein particle complex 1
chr2_-_183582553 0.02 ENSRNOT00000014236
ADP-ribosylation factor interacting protein 1
chr11_-_33003021 0.02 ENSRNOT00000084134
runt-related transcription factor 1
chr10_-_104628676 0.02 ENSRNOT00000010466
unc-13 homolog D
chr9_+_9704346 0.02 ENSRNOT00000075403
G protein-coupled receptor 108
chrX_+_134979646 0.02 ENSRNOT00000006035
SAM and SH3 domain containing 3
chr2_-_204341676 0.02 ENSRNOT00000021713
solute carrier family 22, member 15
chr17_-_45285060 0.02 ENSRNOT00000086879
zinc finger and SCAN domain containing 12
chr10_-_56289882 0.01 ENSRNOT00000090762
ENSRNOT00000056903
tumor necrosis factor superfamily member 13
chr8_+_55603968 0.01 ENSRNOT00000066848
POU class 2 associating factor 1
chr7_-_130151414 0.01 ENSRNOT00000010467
plexin B2
chr17_-_44520240 0.01 ENSRNOT00000086538
histone cluster 1 H2B family member h
chr5_+_50002184 0.01 ENSRNOT00000010962
akirin 2
chr5_+_16526058 0.01 ENSRNOT00000011130
LYN proto-oncogene, Src family tyrosine kinase
chr5_-_154319629 0.01 ENSRNOT00000014415
lysophospholipase II
chr12_-_22021851 0.01 ENSRNOT00000039280
TSC22 domain family, member 4
chr4_-_77747070 0.01 ENSRNOT00000009247
zinc finger protein 746
chr3_+_141225290 0.01 ENSRNOT00000016351
5'-3' exoribonuclease 2
chr5_-_139748489 0.01 ENSRNOT00000078741
nuclear transcription factor Y subunit gamma
chr14_+_45062662 0.01 ENSRNOT00000059124
toll-like receptor 10
chr15_+_12407524 0.01 ENSRNOT00000009249
proteasome 26S subunit, non-ATPase 6
chr4_-_118595580 0.01 ENSRNOT00000024436
annexin A4
chr2_-_154542919 0.01 ENSRNOT00000076880
solute carrier family 33 member 1
chr2_+_187288644 0.01 ENSRNOT00000035271
mitochondrial ribosomal protein L24
chr10_+_90134193 0.01 ENSRNOT00000028375
glucose 6 phosphatase catalytic subunit 3
chr10_+_110346453 0.01 ENSRNOT00000054928
testis expressed 19.1
chr11_+_87435185 0.01 ENSRNOT00000002558
purinergic receptor P2X 6
chr18_-_24397551 0.01 ENSRNOT00000023032
solute carrier family 25, member 46
chr19_+_37260469 0.01 ENSRNOT00000021362
engulfment and cell motility 3
chr3_+_2462466 0.01 ENSRNOT00000014087
ring finger protein 208
chr12_+_2180150 0.01 ENSRNOT00000001322
syntaxin binding protein 2
chr13_+_35554964 0.01 ENSRNOT00000072632
transmembrane protein 185B
chr7_-_3315856 0.01 ENSRNOT00000010035
growth differentiation factor 11
chr18_+_1971506 0.01 ENSRNOT00000092027
mindbomb E3 ubiquitin protein ligase 1
chr18_+_74156553 0.01 ENSRNOT00000022892
ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
chr4_-_163227242 0.01 ENSRNOT00000091552
ENSRNOT00000077793
C-type lectin domain family 7, member A
chr2_+_41157823 0.01 ENSRNOT00000066384
phosphodiesterase 4D
chr3_-_59688692 0.01 ENSRNOT00000078752
Sp3 transcription factor
chr10_+_46818525 0.01 ENSRNOT00000088120
developmentally regulated GTP binding protein 2
chr5_+_159484370 0.01 ENSRNOT00000010593
succinate dehydrogenase complex iron sulfur subunit B
chr1_-_281101438 0.01 ENSRNOT00000012734
RAB11 family interacting protein 2
chr10_+_84986328 0.01 ENSRNOT00000085830
ENSRNOT00000067665
oxysterol binding protein-like 7
chr16_-_19376776 0.01 ENSRNOT00000020748
RAB8A, member RAS oncogene family
chr10_-_65437143 0.01 ENSRNOT00000017264
NIMA-related kinase 8
chr1_-_102970950 0.01 ENSRNOT00000018194
tumor susceptibility 101
chr5_-_127523089 0.01 ENSRNOT00000016954
carnitine palmitoyltransferase 2
chr3_-_52510507 0.01 ENSRNOT00000091259
sodium voltage-gated channel alpha subunit 1
chr1_+_221409271 0.01 ENSRNOT00000028462
synoviolin 1
chr1_+_261180007 0.01 ENSRNOT00000072181
zinc finger, DHHC-type containing 16
chr18_+_44716226 0.01 ENSRNOT00000086431
TNF alpha induced protein 8
chr4_+_56744561 0.01 ENSRNOT00000009737
ATPase H+ transporting V1 subunit F
chr2_+_196013799 0.01 ENSRNOT00000084023
pogo transposable element with ZNF domain
chr17_+_45078556 0.01 ENSRNOT00000088280
zinc finger protein 192
chr10_-_57275708 0.01 ENSRNOT00000005370
profilin 1
chr14_-_62646110 0.01 ENSRNOT00000002992
glucosamine-6-phosphate deaminase 2
chr5_-_136726358 0.01 ENSRNOT00000026739
DPH2 homolog
chr2_+_178389799 0.01 ENSRNOT00000013356
RGD1560010
chr2_+_93518806 0.01 ENSRNOT00000050987
sorting nexin 16
chrX_+_15155230 0.01 ENSRNOT00000073289
ENSRNOT00000051439
Wiskott-Aldrich syndrome
chr7_-_3246071 0.01 ENSRNOT00000044292
ORMDL sphingolipid biosynthesis regulator 2
chr4_-_168656673 0.01 ENSRNOT00000009341
G protein-coupled receptor 19
chr13_+_80125391 0.01 ENSRNOT00000044190
microRNA 199a-2
chr1_-_199064150 0.01 ENSRNOT00000044511
zinc finger protein 689
chr3_-_9807328 0.01 ENSRNOT00000064660
torsin family 1, member A
chr10_+_85608544 0.01 ENSRNOT00000092122
MLLT6, PHD finger domain containing
chr1_-_197997664 0.01 ENSRNOT00000025898
ceroid-lipofuscinosis, neuronal 3
chr12_+_19573909 0.01 ENSRNOT00000029279
late endosomal/lysosomal adaptor, MAPK and MTOR activator 4
chr10_+_93354003 0.01 ENSRNOT00000008140
methyltransferase like 2B
chr20_+_27129291 0.01 ENSRNOT00000031053

chr1_-_84168044 0.01 ENSRNOT00000084586
ENSRNOT00000028348
Sh3kbp1 binding protein 1
chr9_-_92616165 0.01 ENSRNOT00000056995
SP110 nuclear body protein
chr18_+_40586315 0.01 ENSRNOT00000041237
eukaryotic translation initiation factor 1A
chr3_+_72080630 0.01 ENSRNOT00000008911
mediator complex subunit 19
chr2_-_187854363 0.01 ENSRNOT00000092993
lamin A/C
chr4_-_60548021 0.01 ENSRNOT00000065546

chr19_+_43392085 0.01 ENSRNOT00000023854
splicing factor 3b, subunit 3
chr3_+_66673246 0.01 ENSRNOT00000081338
protein phosphatase 1, regulatory (inhibitor) subunit 1C
chr14_+_44413636 0.01 ENSRNOT00000003552
small integral membrane protein 14
chr5_+_137458691 0.01 ENSRNOT00000075464
ENSRNOT00000076895
probable rRNA-processing protein EBP2
chr7_-_93826665 0.01 ENSRNOT00000011344
TNF receptor superfamily member 11B
chr20_+_41266566 0.01 ENSRNOT00000000653
fyn-related Src family tyrosine kinase
chr10_+_11810926 0.01 ENSRNOT00000036205
ENSRNOT00000036189
NLR family, CARD domain containing 3
chr10_+_89174684 0.01 ENSRNOT00000043754
vacuolar protein sorting 25
chr6_-_98566966 0.01 ENSRNOT00000006755
protein phosphatase 2 regulatory subunit B', epsilon
chr10_+_89645973 0.01 ENSRNOT00000086892
DEAH-box helicase 8
chr14_-_106393670 0.01 ENSRNOT00000011429
malate dehydrogenase 1
chr20_-_45399694 0.01 ENSRNOT00000000715
adenosylmethionine decarboxylase 1
chr1_+_86972244 0.01 ENSRNOT00000036907
Ras and Rab interactor-like
chr14_-_64476796 0.01 ENSRNOT00000029104
glucosidase, beta, acid 3
chrX_-_1741701 0.01 ENSRNOT00000031115
ubiquitin-like modifier activating enzyme 1
chr8_+_59711549 0.01 ENSRNOT00000019539
ubiquitin conjugating enzyme E2 Q2
chr1_+_142060955 0.01 ENSRNOT00000017862
VPS33B, late endosome and lysosome associated
chr7_+_2458264 0.01 ENSRNOT00000003550
nascent polypeptide-associated complex alpha subunit
chr13_+_90467265 0.01 ENSRNOT00000008518
coatomer protein complex subunit alpha
chr12_-_21761487 0.01 ENSRNOT00000082910
TSC22 domain family protein 4-like
chr3_+_47578384 0.01 ENSRNOT00000082769
proteasome 26S subunit, non-ATPase 14
chr14_+_10854682 0.01 ENSRNOT00000091367
ENSRNOT00000003072
ENSRNOT00000033489
SEC31 homolog A, COPII coat complex component
chr18_+_3995921 0.01 ENSRNOT00000091424
tetratricopeptide repeat domain 39C
chr3_+_163570532 0.00 ENSRNOT00000010054
ADP ribosylation factor guanine nucleotide exchange factor 2
chr19_+_56136904 0.00 ENSRNOT00000022823
spire-type actin nucleation factor 2
chr12_+_45199577 0.00 ENSRNOT00000075646
SDS3 homolog, SIN3A corepressor complex component
chr3_-_151688149 0.00 ENSRNOT00000072945
NFS1 cysteine desulfurase
chr3_+_66673071 0.00 ENSRNOT00000034769
protein phosphatase 1, regulatory (inhibitor) subunit 1C
chr1_+_224939497 0.00 ENSRNOT00000025664
syntaxin 5
chr8_+_119382011 0.00 ENSRNOT00000056060
LRR binding FLII interacting protein 2
chr7_+_63922879 0.00 ENSRNOT00000043581
similar to Hypothetical protein LOC270802
chr7_+_98813040 0.00 ENSRNOT00000012616
NADH:ubiquinone oxidoreductase subunit B9
chr1_+_221735517 0.00 ENSRNOT00000028628
ENSRNOT00000044866
splicing factor 1
chr8_+_115546893 0.00 ENSRNOT00000018932
DDB1 and CUL4 associated factor 1
chr1_+_173532803 0.00 ENSRNOT00000021017
eukaryotic translation initiation factor 3, subunit F
chrX_+_10964067 0.00 ENSRNOT00000093181
ENSRNOT00000066480
mediator complex subunit 14
chr7_-_122581777 0.00 ENSRNOT00000025758
solute carrier family 25 member 17
chr3_-_111037166 0.00 ENSRNOT00000017070
protein phosphatase 1, regulatory (inhibitor) subunit 14D
chr10_+_59360765 0.00 ENSRNOT00000036278
zinc finger ZZ-type and EF-hand domain containing 1
chr12_-_48663143 0.00 ENSRNOT00000082809
FIC domain containing
chr10_-_12916784 0.00 ENSRNOT00000004589
zinc finger protein 13
chrX_+_124631881 0.00 ENSRNOT00000009329
ATPase Na+/K+ transporting family member beta 4
chr17_-_10001901 0.00 ENSRNOT00000082836
fibroblast growth factor receptor 4

Network of associatons between targets according to the STRING database.

First level regulatory network of Spdef

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.0 GO:0035696 monocyte extravasation(GO:0035696)
0.0 0.0 GO:0019086 late viral transcription(GO:0019086)
0.0 0.1 GO:1990086 lens fiber cell apoptotic process(GO:1990086)