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GSE49485: Hypoxia transcriptome sequencing of rat brain.
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Results for Sox8
Z-value: 0.26
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Transcription factors associated with Sox8
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
Sox8
|
ENSRNOG00000018841 | SRY box 8 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Sox8 | rn6_v1_chr10_-_14937336_14937336 | 0.52 | 3.7e-01 | Click! |
Activity profile of Sox8 motif
Sorted Z-values of Sox8 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr18_+_15490717 | 0.08 |
ENSRNOT00000091557
|
B4galt6
|
beta-1,4-galactosyltransferase 6 |
| chr13_+_34400170 | 0.08 |
ENSRNOT00000061516
ENSRNOT00000061515 ENSRNOT00000061513 ENSRNOT00000084506 ENSRNOT00000086641 |
Clasp1
|
cytoplasmic linker associated protein 1 |
| chr1_+_99505677 | 0.08 |
ENSRNOT00000024645
|
Zfp719
|
zinc finger protein 719 |
| chr13_+_52976507 | 0.07 |
ENSRNOT00000090599
ENSRNOT00000011324 |
Kif21b
|
kinesin family member 21B |
| chr12_-_19254527 | 0.07 |
ENSRNOT00000089349
|
AABR07035541.3
|
|
| chr1_+_224882439 | 0.06 |
ENSRNOT00000024785
|
Chrm1
|
cholinergic receptor, muscarinic 1 |
| chr7_-_140437467 | 0.06 |
ENSRNOT00000087181
|
Fkbp11
|
FK506 binding protein 11 |
| chr16_-_18937562 | 0.05 |
ENSRNOT00000080387
|
Nwd1
|
NACHT and WD repeat domain containing 1 |
| chr2_+_22909569 | 0.05 |
ENSRNOT00000073871
|
Homer1
|
homer scaffolding protein 1 |
| chr1_-_80221417 | 0.05 |
ENSRNOT00000072149
|
Fosb
|
FosB proto-oncogene, AP-1 transcription factor subunit |
| chr17_+_53231343 | 0.05 |
ENSRNOT00000021703
|
Hecw1
|
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 |
| chr18_+_17403407 | 0.04 |
ENSRNOT00000045150
|
RGD1562608
|
similar to KIAA1328 protein |
| chr15_+_41937880 | 0.04 |
ENSRNOT00000032514
|
Kcnrg
|
potassium channel regulator |
| chr1_-_80221710 | 0.04 |
ENSRNOT00000091687
|
Fosb
|
FosB proto-oncogene, AP-1 transcription factor subunit |
| chr6_+_127282466 | 0.04 |
ENSRNOT00000012124
|
Otub2
|
OTU deubiquitinase, ubiquitin aldehyde binding 2 |
| chr9_-_75528644 | 0.04 |
ENSRNOT00000019283
|
Erbb4
|
erb-b2 receptor tyrosine kinase 4 |
| chr2_-_117454769 | 0.03 |
ENSRNOT00000068381
|
Mecom
|
MDS1 and EVI1 complex locus |
| chr17_-_52477575 | 0.03 |
ENSRNOT00000081290
|
Gli3
|
GLI family zinc finger 3 |
| chr1_+_88451958 | 0.03 |
ENSRNOT00000074301
|
LOC102549115
|
zinc finger protein 260-like |
| chr7_-_15821927 | 0.03 |
ENSRNOT00000050658
|
LOC691422
|
similar to zinc finger protein 101 |
| chr18_+_76559811 | 0.03 |
ENSRNOT00000084621
|
Pard6g
|
par-6 family cell polarity regulator gamma |
| chr20_+_27954433 | 0.02 |
ENSRNOT00000064288
|
Lims1
|
LIM zinc finger domain containing 1 |
| chr13_-_73055631 | 0.02 |
ENSRNOT00000081892
|
Xpr1
|
xenotropic and polytropic retrovirus receptor 1 |
| chr4_-_150485781 | 0.02 |
ENSRNOT00000008763
|
Zfp248
|
zinc finger protein 248 |
| chr16_-_20641908 | 0.02 |
ENSRNOT00000026846
|
Ell
|
elongation factor for RNA polymerase II |
| chr1_+_99486253 | 0.01 |
ENSRNOT00000074820
|
LOC102546648
|
uncharacterized LOC102546648 |
| chrX_+_77230180 | 0.01 |
ENSRNOT00000085879
|
Tlr13
|
toll-like receptor 13 |
| chr8_-_60752047 | 0.01 |
ENSRNOT00000048115
|
AABR07070238.2
|
|
| chr20_+_1787174 | 0.01 |
ENSRNOT00000072824
ENSRNOT00000041883 |
Olr1738
|
olfactory receptor 1738 |
| chr6_-_132972511 | 0.01 |
ENSRNOT00000082216
|
Begain
|
brain-enriched guanylate kinase-associated |
| chr8_-_33661049 | 0.00 |
ENSRNOT00000068037
|
Fli1
|
Fli-1 proto-oncogene, ETS transcription factor |
| chr9_+_65110330 | 0.00 |
ENSRNOT00000033068
ENSRNOT00000092868 |
Aox4
|
aldehyde oxidase 4 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Sox8
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0007207 | adenylate cyclase-inhibiting G-protein coupled acetylcholine receptor signaling pathway(GO:0007197) phospholipase C-activating G-protein coupled acetylcholine receptor signaling pathway(GO:0007207) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0031592 | centrosomal corona(GO:0031592) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0008489 | UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity(GO:0008489) |
| 0.0 | 0.1 | GO:0016907 | G-protein coupled acetylcholine receptor activity(GO:0016907) |
| 0.0 | 0.1 | GO:0031802 | type 5 metabotropic glutamate receptor binding(GO:0031802) |