GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Sox6 Links NCBI RGD Ensembl	ENSRNOG00000020514	SRY box 6
Sox9 Links NCBI RGD Ensembl	ENSRNOG00000002607	SRY box 9

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Sox9	rn6_v1_chr10_+_101288489_101288489	0.34	5.8e-01	Click!
Sox6	rn6_v1_chr1_+_185673177_185673177	0.24	6.9e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr18_-_26211445 Show fit	0.31	ENSRNOT00000027739	Nrep Links NCBI RGD Ensembl Show fit	neuronal regeneration related protein
chr17_-_57394985 Show fit	0.22	ENSRNOT00000019968	Epc1 Links NCBI RGD Ensembl Show fit	enhancer of polycomb homolog 1
chr3_+_155160481 Show fit	0.22	ENSRNOT00000021133	Ppp1r16b Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 16B
chr1_-_190965115 Show fit	0.20	ENSRNOT00000023483	AC103221.1 Links NCBI RGD Ensembl Show fit
chr8_+_5967463 Show fit	0.19	ENSRNOT00000086251	Tmem123 Links NCBI RGD Ensembl Show fit	transmembrane protein 123
chr4_+_84423653 Show fit	0.18	ENSRNOT00000012655	Chn2 Links NCBI RGD Ensembl Show fit	chimerin 2
chr8_-_68038533 Show fit	0.18	ENSRNOT00000018756	Skor1 Links NCBI RGD Ensembl Show fit	SKI family transcriptional corepressor 1
chr18_+_30562178 Show fit	0.15	ENSRNOT00000040998	LOC108348771 Links NCBI RGD Ensembl Show fit	protocadherin beta-16-like
chr18_+_30890869 Show fit	0.15	ENSRNOT00000060466	Pcdhgb6 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily B, 6
chr6_+_110624856 Show fit	0.13	ENSRNOT00000014017	Vash1 Links NCBI RGD Ensembl Show fit	vasohibin 1
chr7_+_99954492 Show fit	0.13	ENSRNOT00000005885	Trib1 Links NCBI RGD Ensembl Show fit	tribbles pseudokinase 1
chr10_+_14547172 Show fit	0.13	ENSRNOT00000092043	Unkl Links NCBI RGD Ensembl Show fit	unkempt family like zinc finger
chr1_-_277902279 Show fit	0.13	ENSRNOT00000078416	Ablim1 Links NCBI RGD Ensembl Show fit	actin-binding LIM protein 1
chr11_+_16826399 Show fit	0.13	ENSRNOT00000050701	Cxadr Links NCBI RGD Ensembl Show fit	coxsackie virus and adenovirus receptor
chr9_+_46657575 Show fit	0.12	ENSRNOT00000083322	Map4k4 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase kinase kinase 4
chr10_+_82823918 Show fit	0.12	ENSRNOT00000005519	Samd14 Links NCBI RGD Ensembl Show fit	sterile alpha motif domain containing 14
chr16_-_71319449 Show fit	0.12	ENSRNOT00000029284	Fgfr1 Links NCBI RGD Ensembl Show fit	Fibroblast growth factor receptor 1
chr8_-_6203515 Show fit	0.12	ENSRNOT00000087278 ENSRNOT00000031189 ENSRNOT00000008074 ENSRNOT00000085285 ENSRNOT00000007866	Yap1 Links NCBI RGD Ensembl Show fit	yes-associated protein 1
chr9_-_100253609 Show fit	0.12	ENSRNOT00000036061	Kif1a Links NCBI RGD Ensembl Show fit	kinesin family member 1A
chr3_+_103773459 Show fit	0.12	ENSRNOT00000079727	Slc12a6 Links NCBI RGD Ensembl Show fit	solute carrier family 12, member 6
chr1_+_236580034 Show fit	0.11	ENSRNOT00000074939	Gcnt1 Links NCBI RGD Ensembl Show fit	glucosaminyl (N-acetyl) transferase 1, core 2
chrX_-_73778595 Show fit	0.11	ENSRNOT00000076081 ENSRNOT00000075926 ENSRNOT00000003782	Rlim Links NCBI RGD Ensembl Show fit	ring finger protein, LIM domain interacting
chr6_+_147876237 Show fit	0.11	ENSRNOT00000056649	Tmem196 Links NCBI RGD Ensembl Show fit	transmembrane protein 196
chr18_+_30826260 Show fit	0.11	ENSRNOT00000065235	Pcdhgb1 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily B, 1
chr10_-_18131562 Show fit	0.10	ENSRNOT00000006676	Tlx3 Links NCBI RGD Ensembl Show fit	T-cell leukemia, homeobox 3
chr2_+_2729829 Show fit	0.10	ENSRNOT00000017068	Spata9 Links NCBI RGD Ensembl Show fit	spermatogenesis associated 9
chr3_-_9936352 Show fit	0.10	ENSRNOT00000011224 ENSRNOT00000042798	Fnbp1 Links NCBI RGD Ensembl Show fit	formin binding protein 1
chr3_+_48082935 Show fit	0.09	ENSRNOT00000087711 ENSRNOT00000067545	Slc4a10 Links NCBI RGD Ensembl Show fit	solute carrier family 4 member 10
chr6_+_106052212 Show fit	0.09	ENSRNOT00000010626	Sipa1l1 Links NCBI RGD Ensembl Show fit	signal-induced proliferation-associated 1 like 1
chr4_-_88565292 Show fit	0.09	ENSRNOT00000008948	Lancl2 Links NCBI RGD Ensembl Show fit	LanC like 2
chr19_-_26053762 Show fit	0.09	ENSRNOT00000004646	MAST1 Links NCBI RGD Ensembl Show fit	microtubule associated serine/threonine kinase 1
chr6_-_79306443 Show fit	0.09	ENSRNOT00000030706	Clec14a Links NCBI RGD Ensembl Show fit	C-type lectin domain family 14, member A
chr18_+_30435119 Show fit	0.09	ENSRNOT00000027190	Pcdhb8 Links NCBI RGD Ensembl Show fit	protocadherin beta 8
chr16_-_7538201 Show fit	0.09	ENSRNOT00000082172	Sh3bp5 Links NCBI RGD Ensembl Show fit	SH3-domain binding protein 5
chr4_+_145264462 Show fit	0.09	ENSRNOT00000011246	Brpf1 Links NCBI RGD Ensembl Show fit	bromodomain and PHD finger containing, 1
chr8_+_69971778 Show fit	0.09	ENSRNOT00000058007 ENSRNOT00000037941 ENSRNOT00000050649	Megf11 Links NCBI RGD Ensembl Show fit	multiple EGF-like-domains 11
chr5_+_21830882 Show fit	0.09	ENSRNOT00000008901	Chd7 Links NCBI RGD Ensembl Show fit	chromodomain helicase DNA binding protein 7
chr1_+_177093387 Show fit	0.09	ENSRNOT00000021858	Mical2 Links NCBI RGD Ensembl Show fit	microtubule associated monooxygenase, calponin and LIM domain containing 2
chr17_+_18151982 Show fit	0.09	ENSRNOT00000066447	Kif13a Links NCBI RGD Ensembl Show fit	kinesin family member 13A
chr7_-_114305896 Show fit	0.09	ENSRNOT00000067327 ENSRNOT00000038172	Trappc9 Links NCBI RGD Ensembl Show fit	trafficking protein particle complex 9
chr4_+_68656928 Show fit	0.09	ENSRNOT00000016232	Tas2r108 Links NCBI RGD Ensembl Show fit	taste receptor, type 2, member 108
chr10_+_23661013 Show fit	0.08	ENSRNOT00000076664	Ebf1 Links NCBI RGD Ensembl Show fit	early B-cell factor 1
chr5_-_153625869 Show fit	0.08	ENSRNOT00000024464	Clic4 Links NCBI RGD Ensembl Show fit	chloride intracellular channel 4
chr17_+_70684134 Show fit	0.08	ENSRNOT00000025731 ENSRNOT00000068354	Pfkfb3 Links NCBI RGD Ensembl Show fit	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr7_-_107768072 Show fit	0.08	ENSRNOT00000093189	Ndrg1 Links NCBI RGD Ensembl Show fit	N-myc downstream regulated 1
chr14_-_81399353 Show fit	0.08	ENSRNOT00000018340	Add1 Links NCBI RGD Ensembl Show fit	adducin 1
chr17_+_70684539 Show fit	0.08	ENSRNOT00000025700	Pfkfb3 Links NCBI RGD Ensembl Show fit	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr8_+_59457018 Show fit	0.08	ENSRNOT00000017900	Ireb2 Links NCBI RGD Ensembl Show fit	iron responsive element binding protein 2
chr4_-_123713319 Show fit	0.07	ENSRNOT00000012875 ENSRNOT00000086982	Slc6a6 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 6
chr9_+_14551758 Show fit	0.07	ENSRNOT00000017157	Nfya Links NCBI RGD Ensembl Show fit	nuclear transcription factor Y subunit alpha
chr1_+_31124825 Show fit	0.07	ENSRNOT00000092105	AABR07000989.1 Links NCBI RGD Ensembl Show fit
chr4_-_11610518 Show fit	0.07	ENSRNOT00000066643	Magi2 Links NCBI RGD Ensembl Show fit	membrane associated guanylate kinase, WW and PDZ domain containing 2
chr2_+_104744461 Show fit	0.07	ENSRNOT00000016083 ENSRNOT00000082627	Cp Links NCBI RGD Ensembl Show fit	ceruloplasmin
chr7_-_70467915 Show fit	0.07	ENSRNOT00000088995	Slc26a10 Links NCBI RGD Ensembl Show fit	solute carrier family 26, member 10
chr10_-_90393317 Show fit	0.07	ENSRNOT00000028563	Fam171a2 Links NCBI RGD Ensembl Show fit	family with sequence similarity 171, member A2
chr8_-_62987182 Show fit	0.07	ENSRNOT00000070885	Islr2 Links NCBI RGD Ensembl Show fit	immunoglobulin superfamily containing leucine-rich repeat 2
chr18_+_30913842 Show fit	0.07	ENSRNOT00000026947	Pcdhgc3 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily C, 3
chr13_-_70922245 Show fit	0.07	ENSRNOT00000064860	Dhx9 Links NCBI RGD Ensembl Show fit	DExH-box helicase 9
chr5_+_152606847 Show fit	0.07	ENSRNOT00000089070	Pafah2 Links NCBI RGD Ensembl Show fit	platelet-activating factor acetylhydrolase 2
chr14_+_17492081 Show fit	0.07	ENSRNOT00000003346	G3bp2 Links NCBI RGD Ensembl Show fit	G3BP stress granule assembly factor 2
chr3_-_156777999 Show fit	0.07	ENSRNOT00000032588 ENSRNOT00000091208	Zhx3 Links NCBI RGD Ensembl Show fit	zinc fingers and homeoboxes 3
chr5_-_86696388 Show fit	0.06	ENSRNOT00000007812	Megf9 Links NCBI RGD Ensembl Show fit	multiple EGF-like-domains 9
chr3_+_116899878 Show fit	0.06	ENSRNOT00000090802 ENSRNOT00000066101	Sema6d Links NCBI RGD Ensembl Show fit	semaphorin 6D
chr18_+_30869628 Show fit	0.06	ENSRNOT00000060470	Pcdhgb4 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily B, 4
chr12_+_38303624 Show fit	0.06	ENSRNOT00000001668	Zcchc8 Links NCBI RGD Ensembl Show fit	zinc finger CCHC-type containing 8
chr3_+_162357356 Show fit	0.06	ENSRNOT00000030119	Eya2 Links NCBI RGD Ensembl Show fit	EYA transcriptional coactivator and phosphatase 2
chr5_-_139748489 Show fit	0.06	ENSRNOT00000078741	Nfyc Links NCBI RGD Ensembl Show fit	nuclear transcription factor Y subunit gamma
chr18_+_15467870 Show fit	0.06	ENSRNOT00000091696	B4galt6 Links NCBI RGD Ensembl Show fit	beta-1,4-galactosyltransferase 6
chr9_+_6966908 Show fit	0.06	ENSRNOT00000072796	St6gal2 Links NCBI RGD Ensembl Show fit	ST6 beta-galactoside alpha-2,6-sialyltransferase 2
chr1_+_13595295 Show fit	0.06	ENSRNOT00000079250	Nhsl1 Links NCBI RGD Ensembl Show fit	NHS-like 1
chr4_-_180234804 Show fit	0.06	ENSRNOT00000070957	Bhlhe41 Links NCBI RGD Ensembl Show fit	basic helix-loop-helix family, member e41
chr9_-_85528860 Show fit	0.06	ENSRNOT00000063834 ENSRNOT00000088963	Wdfy1 Links NCBI RGD Ensembl Show fit	WD repeat and FYVE domain containing 1
chr6_-_42473738 Show fit	0.06	ENSRNOT00000033327	Kcnf1 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel modifier subfamily F member 1
chr14_+_11198896 Show fit	0.06	ENSRNOT00000079767	Hnrnpdl Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein D-like
chr16_-_71319052 Show fit	0.06	ENSRNOT00000050980	Fgfr1 Links NCBI RGD Ensembl Show fit	Fibroblast growth factor receptor 1
chr12_+_23473270 Show fit	0.06	ENSRNOT00000001935	Sh2b2 Links NCBI RGD Ensembl Show fit	SH2B adaptor protein 2
chr14_-_84106997 Show fit	0.06	ENSRNOT00000065501	Osbp2 Links NCBI RGD Ensembl Show fit	oxysterol binding protein 2
chr4_+_44774741 Show fit	0.06	ENSRNOT00000086902	Met Links NCBI RGD Ensembl Show fit	MET proto-oncogene, receptor tyrosine kinase
chr14_-_104960141 Show fit	0.06	ENSRNOT00000056944	Aftph Links NCBI RGD Ensembl Show fit	aftiphilin
chr15_-_3773340 Show fit	0.06	ENSRNOT00000063831	LOC103689945 Links NCBI RGD Ensembl Show fit	zinc finger SWIM domain-containing protein 8-like
chr14_-_82287108 Show fit	0.06	ENSRNOT00000023144	Fgfr3 Links NCBI RGD Ensembl Show fit	fibroblast growth factor receptor 3
chr18_+_30900291 Show fit	0.06	ENSRNOT00000060461	Pcdhgb7 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily B, 7
chr15_-_24374753 Show fit	0.05	ENSRNOT00000016274	Atg14 Links NCBI RGD Ensembl Show fit	autophagy related 14
chr7_+_141702038 Show fit	0.05	ENSRNOT00000086577	Dip2b Links NCBI RGD Ensembl Show fit	disco-interacting protein 2 homolog B
chr18_-_16497886 Show fit	0.05	ENSRNOT00000021624	Rprd1a Links NCBI RGD Ensembl Show fit	regulation of nuclear pre-mRNA domain containing 1A
chr14_+_2613406 Show fit	0.05	ENSRNOT00000000083	Tmed5 Links NCBI RGD Ensembl Show fit	transmembrane p24 trafficking protein 5
chr4_+_170518673 Show fit	0.05	ENSRNOT00000011803	Atf7ip Links NCBI RGD Ensembl Show fit	activating transcription factor 7 interacting protein
chr18_+_30880020 Show fit	0.05	ENSRNOT00000060468	Pcdhgb5 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily B, 5
chr6_-_125723732 Show fit	0.05	ENSRNOT00000084815	Fbln5 Links NCBI RGD Ensembl Show fit	fibulin 5
chr8_-_82533689 Show fit	0.05	ENSRNOT00000014124	Tmod2 Links NCBI RGD Ensembl Show fit	tropomodulin 2
chr7_-_117587103 Show fit	0.05	ENSRNOT00000035423	Scrt1 Links NCBI RGD Ensembl Show fit	scratch family transcriptional repressor 1
chr8_+_128824508 Show fit	0.05	ENSRNOT00000025343	Mobp Links NCBI RGD Ensembl Show fit	myelin-associated oligodendrocyte basic protein
chr3_+_14990652 Show fit	0.05	ENSRNOT00000090735	Dab2ip Links NCBI RGD Ensembl Show fit	DAB2 interacting protein
chr19_+_39543242 Show fit	0.05	ENSRNOT00000018837	Wwp2 Links NCBI RGD Ensembl Show fit	WW domain containing E3 ubiquitin protein ligase 2
chr12_-_13668515 Show fit	0.05	ENSRNOT00000086847	Fscn1 Links NCBI RGD Ensembl Show fit	fascin actin-bundling protein 1
chr1_-_89042176 Show fit	0.05	ENSRNOT00000080842	Kmt2b Links NCBI RGD Ensembl Show fit	lysine methyltransferase 2B
chr2_-_62634785 Show fit	0.05	ENSRNOT00000017937	Pdzd2 Links NCBI RGD Ensembl Show fit	PDZ domain containing 2
chr4_+_155321553 Show fit	0.05	ENSRNOT00000089614	Mfap5 Links NCBI RGD Ensembl Show fit	microfibrillar associated protein 5
chr8_+_129617812 Show fit	0.05	ENSRNOT00000079085	Ctnnb1 Links NCBI RGD Ensembl Show fit	catenin beta 1
chr5_+_78483893 Show fit	0.05	ENSRNOT00000059183 ENSRNOT00000059181	Rgs3 Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 3
chr12_+_40018937 Show fit	0.05	ENSRNOT00000001697	Cux2 Links NCBI RGD Ensembl Show fit	cut-like homeobox 2
chr3_+_148510779 Show fit	0.05	ENSRNOT00000012156	Xkr7 Links NCBI RGD Ensembl Show fit	XK related 7
chr10_+_109773890 Show fit	0.04	ENSRNOT00000071823	AC131537.1 Links NCBI RGD Ensembl Show fit
chrX_+_65271366 Show fit	0.04	ENSRNOT00000093499	Msn Links NCBI RGD Ensembl Show fit	moesin
chr9_+_62291809 Show fit	0.04	ENSRNOT00000090621	Plcl1 Links NCBI RGD Ensembl Show fit	phospholipase C-like 1
chr16_+_74237001 Show fit	0.04	ENSRNOT00000026039	Polb Links NCBI RGD Ensembl Show fit	DNA polymerase beta
chr4_+_118207862 Show fit	0.04	ENSRNOT00000085787 ENSRNOT00000023103	Tia1 Links NCBI RGD Ensembl Show fit	TIA1 cytotoxic granule-associated RNA binding protein
chr10_+_47930633 Show fit	0.04	ENSRNOT00000003515	Grap Links NCBI RGD Ensembl Show fit	GRB2-related adaptor protein
chr7_-_15301382 Show fit	0.04	ENSRNOT00000081512	Zfp763 Links NCBI RGD Ensembl Show fit	zinc finger protein 763
chr17_+_35435079 Show fit	0.04	ENSRNOT00000074800	Exoc2 Links NCBI RGD Ensembl Show fit	exocyst complex component 2
chr16_-_19791832 Show fit	0.04	ENSRNOT00000040393	Ushbp1 Links NCBI RGD Ensembl Show fit	USH1 protein network component harmonin binding protein 1
chrX_+_62727755 Show fit	0.04	ENSRNOT00000077055	Pcyt1b Links NCBI RGD Ensembl Show fit	phosphate cytidylyltransferase 1, choline, beta
chr9_-_28972835 Show fit	0.04	ENSRNOT00000086967 ENSRNOT00000079684	Rims1 Links NCBI RGD Ensembl Show fit	regulating synaptic membrane exocytosis 1
chr6_-_125723944 Show fit	0.04	ENSRNOT00000007004	Fbln5 Links NCBI RGD Ensembl Show fit	fibulin 5
chr1_+_264741911 Show fit	0.04	ENSRNOT00000019956	Sema4g Links NCBI RGD Ensembl Show fit	semaphorin 4G
chr2_+_198006316 Show fit	0.04	ENSRNOT00000081383 ENSRNOT00000056289	Aph1a Links NCBI RGD Ensembl Show fit	aph-1 homolog A, gamma secretase subunit
chr2_+_188087486 Show fit	0.04	ENSRNOT00000027455	Rit1 Links NCBI RGD Ensembl Show fit	Ras-like without CAAX 1
chr10_-_103340922 Show fit	0.04	ENSRNOT00000004191	Btbd17 Links NCBI RGD Ensembl Show fit	BTB domain containing 17
chr18_+_30875011 Show fit	0.04	ENSRNOT00000027009	Pcdhga8 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily A, 8
chr10_+_81913689 Show fit	0.04	ENSRNOT00000003780	Tob1 Links NCBI RGD Ensembl Show fit	transducer of ErbB-2.1
chr4_-_125929002 Show fit	0.04	ENSRNOT00000083271	Magi1 Links NCBI RGD Ensembl Show fit	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr1_-_174289647 Show fit	0.04	ENSRNOT00000064902	St5 Links NCBI RGD Ensembl Show fit	suppression of tumorigenicity 5
chr7_+_12144162 Show fit	0.04	ENSRNOT00000077122	Tcf3 Links NCBI RGD Ensembl Show fit	transcription factor 3
chr18_-_38088457 Show fit	0.04	ENSRNOT00000077814	Jakmip2 Links NCBI RGD Ensembl Show fit	janus kinase and microtubule interacting protein 2
chr4_+_158088505 Show fit	0.04	ENSRNOT00000026643	Vwf Links NCBI RGD Ensembl Show fit	von Willebrand factor
chr3_+_3767394 Show fit	0.04	ENSRNOT00000067840	Gpsm1 Links NCBI RGD Ensembl Show fit	G-protein signaling modulator 1
chr9_-_80167033 Show fit	0.03	ENSRNOT00000023530	Igfbp5 Links NCBI RGD Ensembl Show fit	insulin-like growth factor binding protein 5
chr2_-_187401786 Show fit	0.03	ENSRNOT00000025624	Hapln2 Links NCBI RGD Ensembl Show fit	hyaluronan and proteoglycan link protein 2
chr2_+_77868412 Show fit	0.03	ENSRNOT00000065897 ENSRNOT00000014022	Myo10 Links NCBI RGD Ensembl Show fit	myosin X
chr13_+_24823488 Show fit	0.03	ENSRNOT00000019907	Cdh20 Links NCBI RGD Ensembl Show fit	cadherin 20
chr5_+_113725717 Show fit	0.03	ENSRNOT00000032248	Tek Links NCBI RGD Ensembl Show fit	TEK receptor tyrosine kinase
chr3_-_72052990 Show fit	0.03	ENSRNOT00000064009 ENSRNOT00000081400	Ctnnd1 Links NCBI RGD Ensembl Show fit	catenin delta 1
chr18_+_79773608 Show fit	0.03	ENSRNOT00000088484	Zfp516 Links NCBI RGD Ensembl Show fit	zinc finger protein 516
chr10_-_35800120 Show fit	0.03	ENSRNOT00000004361	Maml1 Links NCBI RGD Ensembl Show fit	mastermind-like transcriptional coactivator 1
chr7_-_120490061 Show fit	0.03	ENSRNOT00000016247	Slc16a8 Links NCBI RGD Ensembl Show fit	solute carrier family 16 member 8
chr20_+_10123651 Show fit	0.03	ENSRNOT00000001559	Pde9a Links NCBI RGD Ensembl Show fit	phosphodiesterase 9A
chr2_-_165739874 Show fit	0.03	ENSRNOT00000014384	Kpna4 Links NCBI RGD Ensembl Show fit	karyopherin subunit alpha 4
chr18_+_30574627 Show fit	0.03	ENSRNOT00000060484	Pcdhb19 Links NCBI RGD Ensembl Show fit	protocadherin beta 19
chr12_-_29743705 Show fit	0.03	ENSRNOT00000001185	Caln1 Links NCBI RGD Ensembl Show fit	calneuron 1
chr14_+_84150908 Show fit	0.03	ENSRNOT00000005516	Dusp18 Links NCBI RGD Ensembl Show fit	dual specificity phosphatase 18
chr7_-_63407241 Show fit	0.03	ENSRNOT00000024679	Tbc1d30 Links NCBI RGD Ensembl Show fit	TBC1 domain family, member 30
chr18_+_30550877 Show fit	0.03	ENSRNOT00000027164	LOC108348201 Links NCBI RGD Ensembl Show fit	protocadherin beta-7-like
chr7_-_18612118 Show fit	0.03	ENSRNOT00000078122 ENSRNOT00000010197	Rab11b Links NCBI RGD Ensembl Show fit	RAB11B, member RAS oncogene family
chr5_+_104394119 Show fit	0.03	ENSRNOT00000093557 ENSRNOT00000093462	Adamtsl1 Links NCBI RGD Ensembl Show fit	ADAMTS-like 1
chr10_-_16731898 Show fit	0.03	ENSRNOT00000028186	Crebrf Links NCBI RGD Ensembl Show fit	CREB3 regulatory factor
chr15_+_41927241 Show fit	0.03	ENSRNOT00000012035	Trim13 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 13
chr18_+_30474947 Show fit	0.03	ENSRNOT00000027188	Pcdhb9 Links NCBI RGD Ensembl Show fit	protocadherin beta 9
chr12_+_30198822 Show fit	0.03	ENSRNOT00000041645	Gusb Links NCBI RGD Ensembl Show fit	glucuronidase, beta
chr20_-_38985036 Show fit	0.02	ENSRNOT00000001066	Serinc1 Links NCBI RGD Ensembl Show fit	serine incorporator 1
chr2_+_58448917 Show fit	0.02	ENSRNOT00000082562	Ranbp3l Links NCBI RGD Ensembl Show fit	RAN binding protein 3-like
chr2_-_104133985 Show fit	0.02	ENSRNOT00000088167 ENSRNOT00000067725	Pde7a Links NCBI RGD Ensembl Show fit	phosphodiesterase 7A
chr14_+_11199404 Show fit	0.02	ENSRNOT00000003106	Hnrnpdl Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein D-like
chr4_-_51199570 Show fit	0.02	ENSRNOT00000010788	Slc13a1 Links NCBI RGD Ensembl Show fit	solute carrier family 13 member 1
chr18_+_30909490 Show fit	0.02	ENSRNOT00000026967	Pcdhgb8 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily B, 8
chr4_+_78240385 Show fit	0.02	ENSRNOT00000011041	Zfp775 Links NCBI RGD Ensembl Show fit	zinc finger protein 775
chr6_-_105518725 Show fit	0.02	ENSRNOT00000009693 ENSRNOT00000083488	Map3k9 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase kinase 9
chr8_-_39551700 Show fit	0.02	ENSRNOT00000091894 ENSRNOT00000076025	Pknox2 Links NCBI RGD Ensembl Show fit	PBX/knotted 1 homeobox 2
chr4_-_184096806 Show fit	0.02	ENSRNOT00000055433	LOC100362344 Links NCBI RGD Ensembl Show fit	mKIAA1238 protein-like
chr19_-_43714418 Show fit	0.02	ENSRNOT00000047179	Wdr59 Links NCBI RGD Ensembl Show fit	WD repeat domain 59
chr4_-_115157263 Show fit	0.02	ENSRNOT00000015296	Tet3 Links NCBI RGD Ensembl Show fit	tet methylcytosine dioxygenase 3
chr13_-_72789841 Show fit	0.02	ENSRNOT00000004694	Mr1 Links NCBI RGD Ensembl Show fit	major histocompatibility complex, class I-related
chr1_+_65564173 Show fit	0.02	ENSRNOT00000038860	Zbtb45 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 45
chr5_-_124642569 Show fit	0.02	ENSRNOT00000010680	Prkaa2 Links NCBI RGD Ensembl Show fit	protein kinase AMP-activated catalytic subunit alpha 2
chr3_-_11417546 Show fit	0.02	ENSRNOT00000018776	Lcn2 Links NCBI RGD Ensembl Show fit	lipocalin 2
chr6_+_111180108 Show fit	0.02	ENSRNOT00000082027	Gstz1 Links NCBI RGD Ensembl Show fit	glutathione S-transferase zeta 1
chr10_+_36715565 Show fit	0.02	ENSRNOT00000005048	Clk4 Links NCBI RGD Ensembl Show fit	CDC-like kinase 4
chr8_-_111101416 Show fit	0.02	ENSRNOT00000084413	Cep63 Links NCBI RGD Ensembl Show fit	centrosomal protein 63
chr14_-_36208278 Show fit	0.02	ENSRNOT00000045050 ENSRNOT00000088448	Fip1l1 Links NCBI RGD Ensembl Show fit	factor interacting with PAPOLA and CPSF1
chr2_+_123617794 Show fit	0.02	ENSRNOT00000080632	RGD1307100 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA D630029K19
chr13_+_113692131 Show fit	0.02	ENSRNOT00000057160	Cd34 Links NCBI RGD Ensembl Show fit	CD34 molecule
chr1_+_221236773 Show fit	0.02	ENSRNOT00000051979	Slc25a45 Links NCBI RGD Ensembl Show fit	solute carrier family 25, member 45
chr6_+_134844676 Show fit	0.02	ENSRNOT00000007595	Ppp2r5c Links NCBI RGD Ensembl Show fit	protein phosphatase 2, regulatory subunit B', gamma
chr2_-_117454769 Show fit	0.02	ENSRNOT00000068381	Mecom Links NCBI RGD Ensembl Show fit	MDS1 and EVI1 complex locus
chr15_-_29369504 Show fit	0.02	ENSRNOT00000060297	AABR07017624.1 Links NCBI RGD Ensembl Show fit
chr1_-_126211439 Show fit	0.02	ENSRNOT00000014988	Tjp1 Links NCBI RGD Ensembl Show fit	tight junction protein 1
chr2_+_205553163 Show fit	0.02	ENSRNOT00000039572	Nras Links NCBI RGD Ensembl Show fit	neuroblastoma RAS viral oncogene homolog
chr7_+_66717267 Show fit	0.02	ENSRNOT00000005654	Mon2 Links NCBI RGD Ensembl Show fit	MON2 homolog, regulator of endosome-to-Golgi trafficking
chr9_-_16795887 Show fit	0.02	ENSRNOT00000071609	Cd79al Links NCBI RGD Ensembl Show fit	Cd79a molecule-like
chr9_-_28973246 Show fit	0.02	ENSRNOT00000091865 ENSRNOT00000015453	Rims1 Links NCBI RGD Ensembl Show fit	regulating synaptic membrane exocytosis 1
chr18_+_76559811 Show fit	0.02	ENSRNOT00000084621	Pard6g Links NCBI RGD Ensembl Show fit	par-6 family cell polarity regulator gamma
chr10_+_19366793 Show fit	0.02	ENSRNOT00000050610	Fam196b Links NCBI RGD Ensembl Show fit	family with sequence similarity 196, member B
chr4_-_164051812 Show fit	0.02	ENSRNOT00000085719	AABR07062183.1 Links NCBI RGD Ensembl Show fit
chr1_-_167911961 Show fit	0.02	ENSRNOT00000025097	Olr59 Links NCBI RGD Ensembl Show fit	olfactory receptor 59
chr8_+_117620317 Show fit	0.02	ENSRNOT00000084220	Celsr3 Links NCBI RGD Ensembl Show fit	cadherin, EGF LAG seven-pass G-type receptor 3
chrX_+_65566047 Show fit	0.02	ENSRNOT00000092103	Heph Links NCBI RGD Ensembl Show fit	hephaestin
chr10_-_104482838 Show fit	0.02	ENSRNOT00000007246	Recql5 Links NCBI RGD Ensembl Show fit	RecQ like helicase 5
chr2_+_248715281 Show fit	0.02	ENSRNOT00000089648	Gtf2b Links NCBI RGD Ensembl Show fit	general transcription factor IIB
chr1_+_267359830 Show fit	0.02	ENSRNOT00000015495	Slk Links NCBI RGD Ensembl Show fit	STE20-like kinase
chr4_-_72143748 Show fit	0.01	ENSRNOT00000024428	Tcaf1 Links NCBI RGD Ensembl Show fit	TRPM8 channel-associated factor 1
chr15_-_2731462 Show fit	0.01	ENSRNOT00000018023	Samd8 Links NCBI RGD Ensembl Show fit	sterile alpha motif domain containing 8
chr4_-_77489535 Show fit	0.01	ENSRNOT00000008728	Pdia4 Links NCBI RGD Ensembl Show fit	protein disulfide isomerase family A, member 4
chr6_-_1622196 Show fit	0.01	ENSRNOT00000007492	Prkd3 Links NCBI RGD Ensembl Show fit	protein kinase D3
chr8_-_87158368 Show fit	0.01	ENSRNOT00000077071	Col12a1 Links NCBI RGD Ensembl Show fit	collagen type XII alpha 1 chain
chr5_-_79222687 Show fit	0.01	ENSRNOT00000010516	Akna Links NCBI RGD Ensembl Show fit	AT-hook transcription factor
chr16_-_71203609 Show fit	0.01	ENSRNOT00000088458	Nsd3 Links NCBI RGD Ensembl Show fit	nuclear receptor binding SET domain protein 3
chr9_-_15582556 Show fit	0.01	ENSRNOT00000020516	RGD1561662 Links NCBI RGD Ensembl Show fit	similar to AI661453 protein
chr6_+_147876557 Show fit	0.01	ENSRNOT00000080090	Tmem196 Links NCBI RGD Ensembl Show fit	transmembrane protein 196
chr1_+_13261876 Show fit	0.01	ENSRNOT00000090703	Reps1 Links NCBI RGD Ensembl Show fit	RALBP1 associated Eps domain containing 1
chr5_+_160095427 Show fit	0.01	ENSRNOT00000077609	AABR07050298.1 Links NCBI RGD Ensembl Show fit
chr1_-_185569190 Show fit	0.01	ENSRNOT00000090773	RGD1311703 Links NCBI RGD Ensembl Show fit	similar to sid2057p

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:1902309	negative regulation of peptidyl-serine dephosphorylation(GO:1902309)
0.1	0.2	GO:0035607	ventricular zone neuroblast division(GO:0021847) fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development(GO:0035607)
0.0	0.1	GO:0071477	hypotonic salinity response(GO:0042539) cellular hypotonic salinity response(GO:0071477)
0.0	0.1	GO:1900095	random inactivation of X chromosome(GO:0060816) regulation of dosage compensation by inactivation of X chromosome(GO:1900095)
0.0	0.1	GO:1901491	negative regulation of lymphangiogenesis(GO:1901491)
0.0	0.1	GO:1901421	positive regulation of response to alcohol(GO:1901421)
0.0	0.1	GO:0019417	sulfur oxidation(GO:0019417)
0.0	0.1	GO:0045658	regulation of neutrophil differentiation(GO:0045658)
0.0	0.1	GO:0031632	positive regulation of synaptic vesicle fusion to presynaptic membrane(GO:0031632)
0.0	0.1	GO:0060665	regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling(GO:0060665)
0.0	0.1	GO:0098904	regulation of AV node cell action potential(GO:0098904)
0.0	0.1	GO:0060449	bud elongation involved in lung branching(GO:0060449)
0.0	0.1	GO:1903608	protein localization to cytoplasmic stress granule(GO:1903608)
0.0	0.1	GO:1904798	positive regulation of core promoter binding(GO:1904798)
0.0	0.1	GO:0072383	plus-end-directed vesicle transport along microtubule(GO:0072383) plus-end-directed organelle transport along microtubule(GO:0072386)
0.0	0.1	GO:0016240	autophagosome docking(GO:0016240)
0.0	0.1	GO:1901552	positive regulation of endothelial cell development(GO:1901552) positive regulation of establishment of endothelial barrier(GO:1903142)
0.0	0.0	GO:0036324	vascular endothelial growth factor receptor-2 signaling pathway(GO:0036324)
0.0	0.1	GO:0034141	positive regulation of toll-like receptor 3 signaling pathway(GO:0034141)
0.0	0.2	GO:0043968	histone H2A acetylation(GO:0043968)
0.0	0.1	GO:0061144	alveolar secondary septum development(GO:0061144)
0.0	0.2	GO:0001675	acrosome assembly(GO:0001675)
0.0	0.1	GO:0003223	ventricular compact myocardium morphogenesis(GO:0003223) atrioventricular canal development(GO:0036302) semicircular canal morphogenesis(GO:0048752)
0.0	0.2	GO:0006003	fructose 2,6-bisphosphate metabolic process(GO:0006003)
0.0	0.0	GO:0048014	Tie signaling pathway(GO:0048014)
0.0	0.1	GO:0070940	dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0	0.1	GO:0060352	cell adhesion molecule production(GO:0060352)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0032777	Piccolo NuA4 histone acetyltransferase complex(GO:0032777)
0.0	0.1	GO:0071148	TEAD-1-YAP complex(GO:0071148)
0.0	0.1	GO:0097165	nuclear stress granule(GO:0097165)
0.0	0.1	GO:0016602	CCAAT-binding factor complex(GO:0016602)
0.0	0.1	GO:0071953	elastic fiber(GO:0071953)
0.0	0.0	GO:1990032	parallel fiber(GO:1990032)
0.0	0.0	GO:0097629	extrinsic component of omegasome membrane(GO:0097629)
0.0	0.1	GO:0097441	basilar dendrite(GO:0097441)
0.0	0.0	GO:1990907	Scrib-APC-beta-catenin complex(GO:0034750) beta-catenin-TCF complex(GO:1990907)
0.0	0.1	GO:0030121	AP-1 adaptor complex(GO:0030121)
0.0	0.0	GO:0044393	microspike(GO:0044393)
0.0	0.0	GO:0002193	MAML1-RBP-Jkappa- ICN1 complex(GO:0002193)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0001565	phorbol ester receptor activity(GO:0001565)
0.0	0.2	GO:0005007	fibroblast growth factor-activated receptor activity(GO:0005007)
0.0	0.1	GO:0035827	rubidium ion transmembrane transporter activity(GO:0035827)
0.0	0.1	GO:0030977	taurine binding(GO:0030977)
0.0	0.1	GO:0030350	iron-responsive element binding(GO:0030350)
0.0	0.1	GO:0071253	connexin binding(GO:0071253)
0.0	0.1	GO:0070699	type II activin receptor binding(GO:0070699)
0.0	0.1	GO:0008489	UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity(GO:0008489)
0.0	0.1	GO:0003835	beta-galactoside alpha-2,6-sialyltransferase activity(GO:0003835)
0.0	0.1	GO:0004322	ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.0	0.1	GO:0004111	creatine kinase activity(GO:0004111)
0.0	0.2	GO:0004331	6-phosphofructo-2-kinase activity(GO:0003873) fructose-2,6-bisphosphate 2-phosphatase activity(GO:0004331)
0.0	0.1	GO:0003847	1-alkyl-2-acetylglycerophosphocholine esterase activity(GO:0003847)
0.0	0.1	GO:0008527	taste receptor activity(GO:0008527)
0.0	0.0	GO:0060002	plus-end directed microfilament motor activity(GO:0060002)
0.0	0.1	GO:0034046	poly(G) binding(GO:0034046)
0.0	0.1	GO:0043426	MRF binding(GO:0043426)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	REACTOME SIGNALING BY FGFR3 MUTANTS	Genes involved in Signaling by FGFR3 mutants
0.0	0.2	REACTOME SIGNALING BY ACTIVATED POINT MUTANTS OF FGFR1	Genes involved in Signaling by activated point mutants of FGFR1