GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Rela Links NCBI RGD Ensembl	ENSRNOG00000030888	RELA proto-oncogene, NF-kB subunit
Rel Links NCBI RGD Ensembl	ENSRNOG00000054437	REL proto-oncogene, NF-kB subunit
Nfkb1 Links NCBI RGD Ensembl	ENSRNOG00000023258	nuclear factor kappa B subunit 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Nfkb1	rn6_v1_chr2_-_240866689_240866689	-0.73	1.6e-01	Click!
Rel	rn6_v1_chr14_-_108509892_108509892	-0.47	4.2e-01	Click!
Rela	rn6_v1_chr1_+_220992770_220992770	-0.23	7.1e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr6_-_76270457 Show fit	1.03	ENSRNOT00000009894	Nfkbia Links NCBI RGD Ensembl Show fit	NFKB inhibitor alpha
chr14_-_18745457 Show fit	0.43	ENSRNOT00000003778	Cxcl1 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine ligand 1
chr2_+_189955836 Show fit	0.35	ENSRNOT00000078351	S100a3 Links NCBI RGD Ensembl Show fit	S100 calcium binding protein A3
chr17_+_76002275 Show fit	0.33	ENSRNOT00000092665 ENSRNOT00000086701	Echdc3 Links NCBI RGD Ensembl Show fit	enoyl CoA hydratase domain containing 3
chr10_-_85947938 Show fit	0.29	ENSRNOT00000037318 ENSRNOT00000082427	Arl5c Links NCBI RGD Ensembl Show fit	ADP-ribosylation factor like GTPase 5C
chr1_+_163445527 Show fit	0.27	ENSRNOT00000020520	Lrrc32 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 32
chr20_-_4921348 Show fit	0.25	ENSRNOT00000082497 ENSRNOT00000041151	RT1-CE4 Links NCBI RGD Ensembl Show fit	RT1 class I, locus CE4
chr18_-_28516209 Show fit	0.25	ENSRNOT00000072580	Ecscr Links NCBI RGD Ensembl Show fit	endothelial cell surface expressed chemotaxis and apoptosis regulator
chr9_-_11114843 Show fit	0.24	ENSRNOT00000072031	Ebi3 Links NCBI RGD Ensembl Show fit	Epstein-Barr virus induced 3
chr11_+_47243342 Show fit	0.22	ENSRNOT00000041116	Nfkbiz Links NCBI RGD Ensembl Show fit	NFKB inhibitor zeta
chr20_+_5184515 Show fit	0.21	ENSRNOT00000089411	LOC103694381 Links NCBI RGD Ensembl Show fit	lymphotoxin-beta
chr20_-_4863011 Show fit	0.21	ENSRNOT00000079503	Ltb Links NCBI RGD Ensembl Show fit	lymphotoxin beta
chr5_-_169017295 Show fit	0.20	ENSRNOT00000067481	Camta1 Links NCBI RGD Ensembl Show fit	calmodulin binding transcription activator 1
chr5_-_153924896 Show fit	0.20	ENSRNOT00000065247	Grhl3 Links NCBI RGD Ensembl Show fit	grainyhead-like transcription factor 3
chr3_-_11417546 Show fit	0.19	ENSRNOT00000018776	Lcn2 Links NCBI RGD Ensembl Show fit	lipocalin 2
chr7_-_11648322 Show fit	0.19	ENSRNOT00000026871	Gadd45b Links NCBI RGD Ensembl Show fit	growth arrest and DNA-damage-inducible, beta
chr9_+_9842585 Show fit	0.18	ENSRNOT00000070806	Cd70 Links NCBI RGD Ensembl Show fit	Cd70 molecule
chr4_+_171250818 Show fit	0.17	ENSRNOT00000040576	Ptpro Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, O
chr1_-_80744831 Show fit	0.17	ENSRNOT00000025913	Bcl3 Links NCBI RGD Ensembl Show fit	B-cell CLL/lymphoma 3
chr17_-_13393243 Show fit	0.17	ENSRNOT00000018252	Gadd45g Links NCBI RGD Ensembl Show fit	growth arrest and DNA-damage-inducible, gamma
chr14_-_18733391 Show fit	0.16	ENSRNOT00000003745	Cxcl2 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine ligand 2
chr7_-_28711761 Show fit	0.16	ENSRNOT00000006249	Parpbp Links NCBI RGD Ensembl Show fit	PARP1 binding protein
chr4_-_157266018 Show fit	0.16	ENSRNOT00000019570	LOC100911713 Links NCBI RGD Ensembl Show fit	protein C10-like
chr17_+_56109549 Show fit	0.16	ENSRNOT00000022190	Map3k8 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase kinase kinase 8
chr5_+_135562034 Show fit	0.15	ENSRNOT00000056967	Ccdc163 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 163
chr20_-_3439983 Show fit	0.15	ENSRNOT00000080822 ENSRNOT00000001099	Ier3 Links NCBI RGD Ensembl Show fit	immediate early response 3
chr5_-_167999853 Show fit	0.15	ENSRNOT00000087402	Park7 Links NCBI RGD Ensembl Show fit	Parkinsonism associated deglycase
chr3_+_2643610 Show fit	0.14	ENSRNOT00000037169	Fut7 Links NCBI RGD Ensembl Show fit	fucosyltransferase 7
chr7_+_54247460 Show fit	0.14	ENSRNOT00000005361	Phlda1 Links NCBI RGD Ensembl Show fit	pleckstrin homology-like domain, family A, member 1
chr1_+_80135391 Show fit	0.14	ENSRNOT00000021893	Gpr4 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 4
chr20_-_4863198 Show fit	0.14	ENSRNOT00000001108	Ltb Links NCBI RGD Ensembl Show fit	lymphotoxin beta
chr1_+_86948918 Show fit	0.14	ENSRNOT00000084839	Sirt2 Links NCBI RGD Ensembl Show fit	sirtuin 2
chr19_-_55257876 Show fit	0.13	ENSRNOT00000017564	Cyba Links NCBI RGD Ensembl Show fit	cytochrome b-245 alpha chain
chr18_-_15540177 Show fit	0.13	ENSRNOT00000022113	Ttr Links NCBI RGD Ensembl Show fit	transthyretin
chr11_+_33909439 Show fit	0.13	ENSRNOT00000002310	Cbr3 Links NCBI RGD Ensembl Show fit	carbonyl reductase 3
chr9_+_20279938 Show fit	0.13	ENSRNOT00000075612	Grcc10 Links NCBI RGD Ensembl Show fit	gene rich cluster, C10 gene
chr19_+_561727 Show fit	0.13	ENSRNOT00000016259 ENSRNOT00000081547	Rrad Links NCBI RGD Ensembl Show fit	RRAD, Ras related glycolysis inhibitor and calcium channel regulator
chr8_+_133029625 Show fit	0.13	ENSRNOT00000008809	Ccr3 Links NCBI RGD Ensembl Show fit	C-C motif chemokine receptor 3
chr10_-_13081136 Show fit	0.12	ENSRNOT00000005718	Kremen2 Links NCBI RGD Ensembl Show fit	kringle containing transmembrane protein 2
chr5_+_168019058 Show fit	0.12	ENSRNOT00000077202	Tnfrsf9 Links NCBI RGD Ensembl Show fit	TNF receptor superfamily member 9
chr2_+_195603599 Show fit	0.12	ENSRNOT00000028263	C2cd4d Links NCBI RGD Ensembl Show fit	C2 calcium-dependent domain containing 4D
chr13_-_36022197 Show fit	0.12	ENSRNOT00000091280	Cfap221 Links NCBI RGD Ensembl Show fit	cilia and flagella associated protein 221
chr4_-_28953067 Show fit	0.11	ENSRNOT00000013989	Tfpi2 Links NCBI RGD Ensembl Show fit	tissue factor pathway inhibitor 2
chr1_-_86948845 Show fit	0.11	ENSRNOT00000027212	Nfkbib Links NCBI RGD Ensembl Show fit	NFKB inhibitor beta
chrX_-_32355296 Show fit	0.11	ENSRNOT00000081652 ENSRNOT00000065075	Ap1s2 Links NCBI RGD Ensembl Show fit	adaptor-related protein complex 1, sigma 2 subunit
chr1_+_211582077 Show fit	0.11	ENSRNOT00000023619	Pwwp2b Links NCBI RGD Ensembl Show fit	PWWP domain containing 2B
chr1_-_259357056 Show fit	0.11	ENSRNOT00000022000	Pdlim1 Links NCBI RGD Ensembl Show fit	PDZ and LIM domain 1
chr10_-_97582188 Show fit	0.11	ENSRNOT00000005076	Rgs9 Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 9
chr15_+_50891127 Show fit	0.11	ENSRNOT00000020728	Stc1 Links NCBI RGD Ensembl Show fit	stanniocalcin 1
chr1_+_82473737 Show fit	0.11	ENSRNOT00000028029	B9d2 Links NCBI RGD Ensembl Show fit	B9 protein domain 2
chr10_+_110139783 Show fit	0.11	ENSRNOT00000054939	Slc16a3 Links NCBI RGD Ensembl Show fit	solute carrier family 16 member 3
chr19_+_37229120 Show fit	0.11	ENSRNOT00000076335	Hsf4 Links NCBI RGD Ensembl Show fit	heat shock transcription factor 4
chr6_+_135866739 Show fit	0.11	ENSRNOT00000013460	Exoc3l4 Links NCBI RGD Ensembl Show fit	exocyst complex component 3-like 4
chr13_-_52088780 Show fit	0.11	ENSRNOT00000008754	Elf3 Links NCBI RGD Ensembl Show fit	E74-like factor 3
chr8_-_48850671 Show fit	0.11	ENSRNOT00000016580	Cxcr5 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine receptor 5
chr13_-_90814119 Show fit	0.10	ENSRNOT00000011208	Tagln2 Links NCBI RGD Ensembl Show fit	transgelin 2
chr5_-_137372993 Show fit	0.10	ENSRNOT00000092823	Tmem125 Links NCBI RGD Ensembl Show fit	transmembrane protein 125
chr10_+_86303727 Show fit	0.10	ENSRNOT00000037752	Ppp1r1b Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory (inhibitor) subunit 1B
chr20_+_14095914 Show fit	0.10	ENSRNOT00000093404	Gucd1 Links NCBI RGD Ensembl Show fit	guanylyl cyclase domain containing 1
chr14_+_17195014 Show fit	0.10	ENSRNOT00000031667	Cxcl11 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine ligand 11
chr8_+_23113048 Show fit	0.10	ENSRNOT00000029577	Cnn1 Links NCBI RGD Ensembl Show fit	calponin 1
chr10_+_14240219 Show fit	0.10	ENSRNOT00000020233	Igfals Links NCBI RGD Ensembl Show fit	insulin-like growth factor binding protein, acid labile subunit
chr14_-_34218961 Show fit	0.09	ENSRNOT00000072588	LOC686911 Links NCBI RGD Ensembl Show fit	similar to Exocyst complex component 1 (Exocyst complex component Sec3)
chr5_+_135029955 Show fit	0.09	ENSRNOT00000074860	LOC100911669 Links NCBI RGD Ensembl Show fit	uncharacterized LOC100911669
chr18_+_56071478 Show fit	0.09	ENSRNOT00000025344 ENSRNOT00000025354	Cd74 Links NCBI RGD Ensembl Show fit	CD74 molecule
chr20_-_3299580 Show fit	0.09	ENSRNOT00000050373	Gnl1 Links NCBI RGD Ensembl Show fit	G protein nucleolar 1
chr1_+_202432366 Show fit	0.09	ENSRNOT00000027681	Plpp4 Links NCBI RGD Ensembl Show fit	phospholipid phosphatase 4
chr7_-_28932641 Show fit	0.09	ENSRNOT00000059487	Dram1 Links NCBI RGD Ensembl Show fit	DNA-damage regulated autophagy modulator 1
chr11_+_31694339 Show fit	0.09	ENSRNOT00000002779	Ifngr2 Links NCBI RGD Ensembl Show fit	interferon gamma receptor 2
chr14_-_18839595 Show fit	0.09	ENSRNOT00000078746	Cxcl3 Links NCBI RGD Ensembl Show fit	chemokine (C-X-C motif) ligand 3
chr5_-_147584038 Show fit	0.08	ENSRNOT00000010983	Zbtb8a Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 8a
chrX_+_74497262 Show fit	0.08	ENSRNOT00000003899	Zcchc13 Links NCBI RGD Ensembl Show fit	zinc finger CCHC-type containing 13
chr1_-_167347662 Show fit	0.08	ENSRNOT00000027641 ENSRNOT00000076592	Rhog Links NCBI RGD Ensembl Show fit	ras homolog family member G
chr10_-_10767389 Show fit	0.08	ENSRNOT00000066754	Smim22 Links NCBI RGD Ensembl Show fit	small integral membrane protein 22
chr5_-_166924136 Show fit	0.08	ENSRNOT00000085251	Spsb1 Links NCBI RGD Ensembl Show fit	splA/ryanodine receptor domain and SOCS box containing 1
chr19_-_6031655 Show fit	0.08	ENSRNOT00000092016	AABR07042733.2 Links NCBI RGD Ensembl Show fit
chr4_-_93406182 Show fit	0.08	ENSRNOT00000007437	AABR07060778.1 Links NCBI RGD Ensembl Show fit
chr4_-_30338679 Show fit	0.08	ENSRNOT00000012050	Pon3 Links NCBI RGD Ensembl Show fit	paraoxonase 3
chr1_+_225068009 Show fit	0.08	ENSRNOT00000026651	Ubxn1 Links NCBI RGD Ensembl Show fit	UBX domain protein 1
chr4_+_83713666 Show fit	0.08	ENSRNOT00000086473	Creb5 Links NCBI RGD Ensembl Show fit	cAMP responsive element binding protein 5
chr5_+_98469047 Show fit	0.08	ENSRNOT00000041374	Lurap1l Links NCBI RGD Ensembl Show fit	leucine rich adaptor protein 1-like
chr3_+_113415774 Show fit	0.08	ENSRNOT00000056151	Serf2 Links NCBI RGD Ensembl Show fit	small EDRK-rich factor 2
chr9_+_81644975 Show fit	0.08	ENSRNOT00000057480	Catip Links NCBI RGD Ensembl Show fit	ciliogenesis associated TTC17 interacting protein
chr1_+_84470829 Show fit	0.08	ENSRNOT00000025472	Ttc9b Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 9B
chr9_+_88918433 Show fit	0.07	ENSRNOT00000021730	Ccl20 Links NCBI RGD Ensembl Show fit	C-C motif chemokine ligand 20
chr10_+_77537340 Show fit	0.07	ENSRNOT00000003297	Tmem100 Links NCBI RGD Ensembl Show fit	transmembrane protein 100
chr6_+_135890931 Show fit	0.07	ENSRNOT00000042973	Tnfaip2 Links NCBI RGD Ensembl Show fit	TNF alpha induced protein 2
chr5_-_168000083 Show fit	0.07	ENSRNOT00000091206	Park7 Links NCBI RGD Ensembl Show fit	Parkinsonism associated deglycase
chr3_-_9738752 Show fit	0.07	ENSRNOT00000045993	Ptges Links NCBI RGD Ensembl Show fit	prostaglandin E synthase
chr4_+_78458625 Show fit	0.07	ENSRNOT00000049891	Tmem176a Links NCBI RGD Ensembl Show fit	transmembrane protein 176A
chr2_+_154604832 Show fit	0.07	ENSRNOT00000013777	Vom2r44 Links NCBI RGD Ensembl Show fit	vomeronasal 2 receptor 44
chr7_-_145154131 Show fit	0.07	ENSRNOT00000055271	Ppp1r1a Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory (inhibitor) subunit 1A
chrX_-_15761932 Show fit	0.07	ENSRNOT00000015641 ENSRNOT00000091146	Foxp3 Links NCBI RGD Ensembl Show fit	forkhead box P3
chr1_+_177569618 Show fit	0.07	ENSRNOT00000090042	Tead1 Links NCBI RGD Ensembl Show fit	TEA domain transcription factor 1
chr8_-_6076598 Show fit	0.07	ENSRNOT00000090774	Birc3 Links NCBI RGD Ensembl Show fit	baculoviral IAP repeat-containing 3
chr17_+_14469488 Show fit	0.07	ENSRNOT00000060670	AABR07027111.1 Links NCBI RGD Ensembl Show fit
chr17_-_1999596 Show fit	0.07	ENSRNOT00000072220	1190003K10Rik Links NCBI RGD Ensembl Show fit	RIKEN cDNA 1190003K10 gene
chr1_-_215553451 Show fit	0.07	ENSRNOT00000027407	Ctsd Links NCBI RGD Ensembl Show fit	cathepsin D
chr10_-_70744315 Show fit	0.07	ENSRNOT00000014865	Ccl5 Links NCBI RGD Ensembl Show fit	C-C motif chemokine ligand 5
chr4_-_157439507 Show fit	0.07	ENSRNOT00000081802	Ptms Links NCBI RGD Ensembl Show fit	parathymosin
chr10_-_88172910 Show fit	0.07	ENSRNOT00000046956	Krt42 Links NCBI RGD Ensembl Show fit	keratin 42
chr4_+_78080310 Show fit	0.07	ENSRNOT00000035906	Sspo Links NCBI RGD Ensembl Show fit	SCO-spondin
chr19_-_37912027 Show fit	0.07	ENSRNOT00000026462	Psmb10 Links NCBI RGD Ensembl Show fit	proteasome subunit beta 10
chr4_+_44321883 Show fit	0.06	ENSRNOT00000091095	Tes Links NCBI RGD Ensembl Show fit	testin LIM domain protein
chr4_+_145399913 Show fit	0.06	ENSRNOT00000012177	Jagn1 Links NCBI RGD Ensembl Show fit	jagunal homolog 1
chr7_+_116632506 Show fit	0.06	ENSRNOT00000009811	Gpihbp1 Links NCBI RGD Ensembl Show fit	glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
chr1_-_226657408 Show fit	0.06	ENSRNOT00000028102	Tkfc Links NCBI RGD Ensembl Show fit	triokinase and FMN cyclase
chr18_+_81694808 Show fit	0.06	ENSRNOT00000020446	Cyb5a Links NCBI RGD Ensembl Show fit	cytochrome b5 type A
chr2_-_204254699 Show fit	0.06	ENSRNOT00000021487	Mab21l3 Links NCBI RGD Ensembl Show fit	mab-21 like 3
chr6_+_28382962 Show fit	0.06	ENSRNOT00000016976	Pomc Links NCBI RGD Ensembl Show fit	proopiomelanocortin
chr20_-_3298835 Show fit	0.06	ENSRNOT00000083617	Gnl1 Links NCBI RGD Ensembl Show fit	G protein nucleolar 1
chr1_-_24190896 Show fit	0.06	ENSRNOT00000016121	Sgk1 Links NCBI RGD Ensembl Show fit	serum/glucocorticoid regulated kinase 1
chr17_+_80882666 Show fit	0.06	ENSRNOT00000024430	Vim Links NCBI RGD Ensembl Show fit	vimentin
chr1_-_3849080 Show fit	0.06	ENSRNOT00000045301	RGD1560633 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein L27a
chr9_+_82647071 Show fit	0.06	ENSRNOT00000027135	Asic4 Links NCBI RGD Ensembl Show fit	acid sensing ion channel subunit family member 4
chr12_+_27155587 Show fit	0.06	ENSRNOT00000044800	AABR07035916.1 Links NCBI RGD Ensembl Show fit
chr4_-_78458179 Show fit	0.06	ENSRNOT00000078473 ENSRNOT00000011327	Tmem176b Links NCBI RGD Ensembl Show fit	transmembrane protein 176B
chr4_-_157252104 Show fit	0.06	ENSRNOT00000082739	Ptpn6 Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, non-receptor type 6
chr7_-_71048383 Show fit	0.06	ENSRNOT00000005693	Gpr182 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 182
chr20_+_4966817 Show fit	0.06	ENSRNOT00000081527 ENSRNOT00000081265	Lsm2 Links NCBI RGD Ensembl Show fit	LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
chr1_+_41325462 Show fit	0.06	ENSRNOT00000081017 ENSRNOT00000078494 ENSRNOT00000088168	Esr1 Links NCBI RGD Ensembl Show fit	estrogen receptor 1
chr10_-_95934345 Show fit	0.06	ENSRNOT00000004349	Cacng1 Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel auxiliary subunit gamma 1
chr9_+_82053581 Show fit	0.06	ENSRNOT00000086375	Wnt10a Links NCBI RGD Ensembl Show fit	wingless-type MMTV integration site family, member 10A
chr1_+_240776969 Show fit	0.06	ENSRNOT00000049732	RGD1561453 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S12
chr3_-_175479034 Show fit	0.06	ENSRNOT00000086761	Hrh3 Links NCBI RGD Ensembl Show fit	histamine receptor H3
chr10_-_87407634 Show fit	0.06	ENSRNOT00000016657	Krt23 Links NCBI RGD Ensembl Show fit	keratin 23
chr1_-_85517360 Show fit	0.06	ENSRNOT00000026114	Eid2 Links NCBI RGD Ensembl Show fit	EP300 interacting inhibitor of differentiation 2
chr14_+_4362717 Show fit	0.06	ENSRNOT00000002887	Barhl2 Links NCBI RGD Ensembl Show fit	BarH-like homeobox 2
chr5_-_109651730 Show fit	0.06	ENSRNOT00000093032	Elavl2 Links NCBI RGD Ensembl Show fit	ELAV like RNA binding protein 2
chr7_-_144993652 Show fit	0.06	ENSRNOT00000087748	Itga5 Links NCBI RGD Ensembl Show fit	integrin subunit alpha 5
chr16_+_61954809 Show fit	0.05	ENSRNOT00000068011	Rbpms Links NCBI RGD Ensembl Show fit	RNA binding protein with multiple splicing
chr18_+_60745035 Show fit	0.05	ENSRNOT00000045098	LOC502176 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC502176
chr20_-_3978845 Show fit	0.05	ENSRNOT00000000532	Psmb9 Links NCBI RGD Ensembl Show fit	proteasome subunit beta 9
chr15_-_25505691 Show fit	0.05	ENSRNOT00000074488	LOC100911492 Links NCBI RGD Ensembl Show fit	homeobox protein OTX2-like
chr1_-_213811901 Show fit	0.05	ENSRNOT00000020265	Ifitm3 Links NCBI RGD Ensembl Show fit	interferon induced transmembrane protein 3
chr3_-_142752325 Show fit	0.05	ENSRNOT00000006200	Thbd Links NCBI RGD Ensembl Show fit	thrombomodulin
chr13_-_77959089 Show fit	0.05	ENSRNOT00000003586	Cacybp Links NCBI RGD Ensembl Show fit	calcyclin binding protein
chr5_+_156026911 Show fit	0.05	ENSRNOT00000046802	Rap1gap Links NCBI RGD Ensembl Show fit	Rap1 GTPase-activating protein
chr13_-_105684374 Show fit	0.05	ENSRNOT00000073142	Spata17 Links NCBI RGD Ensembl Show fit	spermatogenesis associated 17
chr10_-_15204143 Show fit	0.05	ENSRNOT00000026971	Rhbdl1 Links NCBI RGD Ensembl Show fit	rhomboid like 1
chr1_-_102255459 Show fit	0.05	ENSRNOT00000067392	Ush1c Links NCBI RGD Ensembl Show fit	USH1 protein network component harmonin
chr7_-_140356209 Show fit	0.05	ENSRNOT00000077856	Rnd1 Links NCBI RGD Ensembl Show fit	Rho family GTPase 1
chr1_-_215536980 Show fit	0.05	ENSRNOT00000027344	Ifitm10 Links NCBI RGD Ensembl Show fit	interferon induced transmembrane protein 10
chr1_-_129780356 Show fit	0.05	ENSRNOT00000077479	Arrdc4 Links NCBI RGD Ensembl Show fit	arrestin domain containing 4
chr7_-_11754508 Show fit	0.05	ENSRNOT00000026341	Oaz1 Links NCBI RGD Ensembl Show fit	ornithine decarboxylase antizyme 1
chrX_-_40086870 Show fit	0.05	ENSRNOT00000010027	Smpx Links NCBI RGD Ensembl Show fit	small muscle protein, X-linked
chr7_-_12918173 Show fit	0.05	ENSRNOT00000011010	Tpgs1 Links NCBI RGD Ensembl Show fit	tubulin polyglutamylase complex subunit 1
chr15_+_10120206 Show fit	0.05	ENSRNOT00000033048	Rarb Links NCBI RGD Ensembl Show fit	retinoic acid receptor, beta
chr12_+_24989298 Show fit	0.05	ENSRNOT00000032780	Eln Links NCBI RGD Ensembl Show fit	elastin
chr1_-_215536770 Show fit	0.05	ENSRNOT00000078030	Ifitm10 Links NCBI RGD Ensembl Show fit	interferon induced transmembrane protein 10
chrX_-_71121034 Show fit	0.05	ENSRNOT00000076590	Snx12 Links NCBI RGD Ensembl Show fit	sorting nexin 12
chr5_-_57267002 Show fit	0.05	ENSRNOT00000011455	Bag1 Links NCBI RGD Ensembl Show fit	Bcl2 associated athanogene 1
chr13_-_89433815 Show fit	0.05	ENSRNOT00000091541	Fcgr2b Links NCBI RGD Ensembl Show fit	Fc fragment of IgG receptor IIb
chr2_+_60131776 Show fit	0.05	ENSRNOT00000080786	Prlr Links NCBI RGD Ensembl Show fit	prolactin receptor
chr4_-_80313411 Show fit	0.05	ENSRNOT00000041621	RGD1565415 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein L27a
chr15_-_58711872 Show fit	0.05	ENSRNOT00000058204	Serp2 Links NCBI RGD Ensembl Show fit	stress-associated endoplasmic reticulum protein family member 2
chr19_+_58505811 Show fit	0.05	ENSRNOT00000031717	Map10 Links NCBI RGD Ensembl Show fit	microtubule-associated protein 10
chr14_-_10446909 Show fit	0.05	ENSRNOT00000002962	Mrps18c Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein S18C
chr7_-_144837395 Show fit	0.05	ENSRNOT00000089024	Cbx5 Links NCBI RGD Ensembl Show fit	chromobox 5
chr1_+_184299250 Show fit	0.05	ENSRNOT00000030540	Insc Links NCBI RGD Ensembl Show fit	inscuteable homolog (Drosophila)
chr4_+_172119331 Show fit	0.04	ENSRNOT00000010579	Mgst1 Links NCBI RGD Ensembl Show fit	microsomal glutathione S-transferase 1
chr10_+_39066716 Show fit	0.04	ENSRNOT00000010729	Il5 Links NCBI RGD Ensembl Show fit	interleukin 5
chr4_-_163049084 Show fit	0.04	ENSRNOT00000091644	Cd69 Links NCBI RGD Ensembl Show fit	Cd69 molecule
chrX_-_104932508 Show fit	0.04	ENSRNOT00000075325	Nox1 Links NCBI RGD Ensembl Show fit	NADPH oxidase 1
chr13_-_91228901 Show fit	0.04	ENSRNOT00000071728 ENSRNOT00000073643 ENSRNOT00000071897	LOC100911825 Links NCBI RGD Ensembl Show fit	low affinity immunoglobulin gamma Fc region receptor III-like
chr2_-_235852708 Show fit	0.04	ENSRNOT00000009046 ENSRNOT00000005772	Rpl34 Links NCBI RGD Ensembl Show fit	ribosomal protein L34
chr1_-_266086299 Show fit	0.04	ENSRNOT00000026609	Cuedc2 Links NCBI RGD Ensembl Show fit	CUE domain containing 2
chr11_+_72705129 Show fit	0.04	ENSRNOT00000073330	Apod Links NCBI RGD Ensembl Show fit	apolipoprotein D
chr3_+_110982553 Show fit	0.04	ENSRNOT00000030754	LOC691418 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC691418
chr7_-_12399910 Show fit	0.04	ENSRNOT00000021677	RGD1562114 Links NCBI RGD Ensembl Show fit	RGD1562114
chr13_-_50549981 Show fit	0.04	ENSRNOT00000003918 ENSRNOT00000080486	Golt1a Links NCBI RGD Ensembl Show fit	golgi transport 1A
chr12_-_22748860 Show fit	0.04	ENSRNOT00000001923	Cldn15 Links NCBI RGD Ensembl Show fit	claudin 15
chr20_-_5476193 Show fit	0.04	ENSRNOT00000044975	Tapbp Links NCBI RGD Ensembl Show fit	TAP binding protein
chr9_+_42871950 Show fit	0.04	ENSRNOT00000089673	Arid5a Links NCBI RGD Ensembl Show fit	AT-rich interaction domain 5A
chr4_-_10517832 Show fit	0.04	ENSRNOT00000039953 ENSRNOT00000083964	Gsap Links NCBI RGD Ensembl Show fit	gamma-secretase activating protein
chr9_+_65172194 Show fit	0.04	ENSRNOT00000040493	AC128084.1 Links NCBI RGD Ensembl Show fit
chr5_-_143120165 Show fit	0.04	ENSRNOT00000012314	Zc3h12a Links NCBI RGD Ensembl Show fit	zinc finger CCCH type containing 12A
chr4_+_71740532 Show fit	0.04	ENSRNOT00000023537	Zyx Links NCBI RGD Ensembl Show fit	zyxin
chr20_+_11489456 Show fit	0.04	ENSRNOT00000001632	Lrrc3 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 3
chr1_+_166433109 Show fit	0.04	ENSRNOT00000026428	Stard10 Links NCBI RGD Ensembl Show fit	StAR-related lipid transfer domain containing 10
chr20_-_3751994 Show fit	0.04	ENSRNOT00000072288	Pou5f1 Links NCBI RGD Ensembl Show fit	POU class 5 homeobox 1
chr7_-_144837583 Show fit	0.04	ENSRNOT00000055289	Cbx5 Links NCBI RGD Ensembl Show fit	chromobox 5
chr3_-_23297774 Show fit	0.04	ENSRNOT00000019162	Rpl35 Links NCBI RGD Ensembl Show fit	ribosomal protein L35
chr2_+_158097843 Show fit	0.04	ENSRNOT00000016541	Ptx3 Links NCBI RGD Ensembl Show fit	pentraxin 3
chr13_+_51240911 Show fit	0.04	ENSRNOT00000005551	Adipor1 Links NCBI RGD Ensembl Show fit	adiponectin receptor 1
chr2_+_147006830 Show fit	0.04	ENSRNOT00000080780	AABR07010672.1 Links NCBI RGD Ensembl Show fit
chr9_+_97355924 Show fit	0.04	ENSRNOT00000026558	Ackr3 Links NCBI RGD Ensembl Show fit	atypical chemokine receptor 3
chr18_-_29290447 Show fit	0.04	ENSRNOT00000025353	Pfdn1 Links NCBI RGD Ensembl Show fit	prefoldin subunit 1
chr14_-_18862407 Show fit	0.04	ENSRNOT00000003823	Cxcl6 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine ligand 6
chr1_+_282568287 Show fit	0.04	ENSRNOT00000015997	Ces2i Links NCBI RGD Ensembl Show fit	carboxylesterase 2I
chr9_-_66627007 Show fit	0.04	ENSRNOT00000049571	AABR07067829.1 Links NCBI RGD Ensembl Show fit
chr20_-_3299420 Show fit	0.04	ENSRNOT00000090999	Gnl1 Links NCBI RGD Ensembl Show fit	G protein nucleolar 1
chr10_-_72556564 Show fit	0.04	ENSRNOT00000048373	AABR07030162.1 Links NCBI RGD Ensembl Show fit
chr10_-_89088993 Show fit	0.04	ENSRNOT00000027458	Ccr10 Links NCBI RGD Ensembl Show fit	C-C motif chemokine receptor 10
chr10_-_70788309 Show fit	0.04	ENSRNOT00000029184	Ccl9 Links NCBI RGD Ensembl Show fit	chemokine (C-C motif) ligand 9
chr9_+_20213588 Show fit	0.04	ENSRNOT00000089341	LOC100911515 Links NCBI RGD Ensembl Show fit	triosephosphate isomerase-like
chr9_-_64096265 Show fit	0.04	ENSRNOT00000013502	Tyw5 Links NCBI RGD Ensembl Show fit	tRNA-yW synthesizing protein 5
chr14_-_86739335 Show fit	0.04	ENSRNOT00000078282	Purb Links NCBI RGD Ensembl Show fit	purine rich element binding protein B
chr9_-_3965939 Show fit	0.04	ENSRNOT00000088289	AABR07066144.1 Links NCBI RGD Ensembl Show fit
chr2_+_86951776 Show fit	0.04	ENSRNOT00000087275	AABR07009105.1 Links NCBI RGD Ensembl Show fit

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	1.1	GO:0007253	cytoplasmic sequestering of NF-kappaB(GO:0007253)
0.2	0.5	GO:0070949	regulation of neutrophil mediated cytotoxicity(GO:0070948) regulation of neutrophil mediated killing of symbiont cell(GO:0070949)
0.1	0.3	GO:1903093	regulation of protein K48-linked deubiquitination(GO:1903093) negative regulation of protein K48-linked deubiquitination(GO:1903094) negative regulation of ubiquitin-specific protease activity(GO:2000157)
0.1	0.1	GO:0033864	positive regulation of NAD(P)H oxidase activity(GO:0033864)
0.1	0.2	GO:0015688	iron chelate transport(GO:0015688) siderophore transport(GO:0015891)
0.1	0.2	GO:0045082	positive regulation of interleukin-10 biosynthetic process(GO:0045082)
0.0	0.1	GO:0045210	FasL biosynthetic process(GO:0045210)
0.0	0.1	GO:2000777	positive regulation of oocyte maturation(GO:1900195) positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia(GO:2000777)
0.0	0.1	GO:0042376	phylloquinone metabolic process(GO:0042374) phylloquinone catabolic process(GO:0042376) quinone catabolic process(GO:1901662)
0.0	0.1	GO:2001183	negative regulation of interleukin-12 secretion(GO:2001183)
0.0	0.2	GO:0045084	positive regulation of interleukin-12 biosynthetic process(GO:0045084)
0.0	0.2	GO:0003105	negative regulation of glomerular filtration(GO:0003105)
0.0	0.1	GO:0072144	glomerular mesangial cell development(GO:0072144)
0.0	0.3	GO:0046007	negative regulation of activated T cell proliferation(GO:0046007)
0.0	0.1	GO:0042222	interleukin-1 biosynthetic process(GO:0042222)
0.0	0.0	GO:0071298	cellular response to L-ascorbic acid(GO:0071298)
0.0	0.0	GO:0002434	immune complex clearance(GO:0002434)
0.0	0.1	GO:0002458	peripheral T cell tolerance induction(GO:0002458) peripheral tolerance induction(GO:0002465) negative regulation of interferon-gamma biosynthetic process(GO:0045077)
0.0	0.1	GO:0042509	CD8-positive, alpha-beta T cell extravasation(GO:0035697) regulation of tyrosine phosphorylation of STAT protein(GO:0042509) positive regulation of tyrosine phosphorylation of STAT protein(GO:0042531)
0.0	0.1	GO:1990375	baculum development(GO:1990375)
0.0	0.1	GO:0010986	positive regulation of lipoprotein particle clearance(GO:0010986)
0.0	0.4	GO:1900745	positive regulation of p38MAPK cascade(GO:1900745)
0.0	0.3	GO:0051601	exocyst localization(GO:0051601)
0.0	0.1	GO:0007181	transforming growth factor beta receptor complex assembly(GO:0007181)
0.0	0.1	GO:0002901	mature B cell apoptotic process(GO:0002901) regulation of mature B cell apoptotic process(GO:0002905) negative regulation of mature B cell apoptotic process(GO:0002906)
0.0	0.0	GO:0010730	negative regulation of hydrogen peroxide biosynthetic process(GO:0010730)
0.0	0.1	GO:1990792	response to glial cell derived neurotrophic factor(GO:1990790) cellular response to glial cell derived neurotrophic factor(GO:1990792)
0.0	0.0	GO:1902268	negative regulation of polyamine transmembrane transport(GO:1902268)
0.0	0.1	GO:2000402	negative regulation of lymphocyte migration(GO:2000402)
0.0	0.1	GO:0038158	granulocyte colony-stimulating factor signaling pathway(GO:0038158)
0.0	0.1	GO:0009804	coumarin metabolic process(GO:0009804) negative regulation of superoxide anion generation(GO:0032929)
0.0	0.2	GO:2000042	negative regulation of double-strand break repair via homologous recombination(GO:2000042)
0.0	0.1	GO:0039534	negative regulation of MDA-5 signaling pathway(GO:0039534)
0.0	0.1	GO:0036135	Schwann cell migration(GO:0036135) regulation of Schwann cell migration(GO:1900147)
0.0	0.1	GO:0033277	abortive mitotic cell cycle(GO:0033277)
0.0	0.1	GO:0007621	negative regulation of female receptivity(GO:0007621)
0.0	0.1	GO:0070327	thyroid hormone transport(GO:0070327)
0.0	0.1	GO:0002361	CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation(GO:0002361)
0.0	0.2	GO:0090179	planar cell polarity pathway involved in neural tube closure(GO:0090179)
0.0	0.0	GO:0002397	MHC class I protein complex assembly(GO:0002397)
0.0	0.1	GO:1901423	response to benzene(GO:1901423)
0.0	0.0	GO:0100012	regulation of heart induction by regulation of canonical Wnt signaling pathway(GO:0090081) regulation of heart induction(GO:0090381) regulation of heart induction by canonical Wnt signaling pathway(GO:0100012)
0.0	0.0	GO:0052203	modulation of catalytic activity in other organism involved in symbiotic interaction(GO:0052203) modulation by host of symbiont catalytic activity(GO:0052422) regulation of exo-alpha-sialidase activity(GO:1903015)
0.0	0.0	GO:0030221	basophil differentiation(GO:0030221)
0.0	0.1	GO:1902177	positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway(GO:1902177)
0.0	0.0	GO:0044211	CTP salvage(GO:0044211)
0.0	0.0	GO:0015864	pyrimidine nucleoside transport(GO:0015864)
0.0	0.0	GO:2000562	negative regulation of CD4-positive, alpha-beta T cell proliferation(GO:2000562)
0.0	0.0	GO:0097029	mature conventional dendritic cell differentiation(GO:0097029)
0.0	0.1	GO:0035879	plasma membrane lactate transport(GO:0035879)
0.0	0.1	GO:0030222	eosinophil differentiation(GO:0030222)
0.0	0.2	GO:1901029	negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway(GO:1901029)
0.0	0.0	GO:1903413	cellular response to bile acid(GO:1903413)
0.0	0.0	GO:0035964	COPI-coated vesicle budding(GO:0035964)
0.0	0.6	GO:0070098	chemokine-mediated signaling pathway(GO:0070098)
0.0	0.0	GO:0033123	positive regulation of purine nucleotide catabolic process(GO:0033123)
0.0	0.1	GO:0043402	glucocorticoid mediated signaling pathway(GO:0043402)
0.0	0.0	GO:0032902	nerve growth factor production(GO:0032902) positive regulation of eating behavior(GO:1904000)
0.0	0.0	GO:0046968	cytosol to ER transport(GO:0046967) peptide antigen transport(GO:0046968)
0.0	0.1	GO:1904970	brush border assembly(GO:1904970)
0.0	0.1	GO:1904706	negative regulation of vascular smooth muscle cell proliferation(GO:1904706)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.2	GO:0033256	I-kappaB/NF-kappaB complex(GO:0033256)
0.0	0.1	GO:0035692	macrophage migration inhibitory factor receptor complex(GO:0035692)
0.0	0.1	GO:0071148	TEAD-1-YAP complex(GO:0071148)
0.0	0.2	GO:0043020	NADPH oxidase complex(GO:0043020)
0.0	0.1	GO:1990111	spermatoproteasome complex(GO:1990111)
0.0	0.3	GO:0042612	MHC class I protein complex(GO:0042612)
0.0	0.1	GO:0033010	paranodal junction(GO:0033010)
0.0	0.1	GO:0005927	muscle tendon junction(GO:0005927)
0.0	0.1	GO:0042567	insulin-like growth factor ternary complex(GO:0042567)
0.0	0.1	GO:0045098	type III intermediate filament(GO:0045098)
0.0	0.1	GO:0005641	nuclear envelope lumen(GO:0005641)
0.0	0.1	GO:0000015	phosphopyruvate hydratase complex(GO:0000015)
0.0	0.0	GO:0060187	cell pole(GO:0060187)
0.0	0.1	GO:0042825	TAP complex(GO:0042825)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0036478	tyrosine 3-monooxygenase activator activity(GO:0036470) L-dopa decarboxylase activator activity(GO:0036478)
0.1	0.3	GO:0043120	tumor necrosis factor binding(GO:0043120)
0.1	0.7	GO:0045236	CXCR chemokine receptor binding(GO:0045236)
0.0	0.1	GO:0042903	tubulin deacetylase activity(GO:0042903)
0.0	0.1	GO:0000253	3-keto sterol reductase activity(GO:0000253)
0.0	1.0	GO:0008139	nuclear localization sequence binding(GO:0008139)
0.0	0.1	GO:0031752	D5 dopamine receptor binding(GO:0031752)
0.0	0.1	GO:0046573	lactonohydrolase activity(GO:0046573) acyl-L-homoserine-lactone lactonohydrolase activity(GO:0102007)
0.0	0.1	GO:0046920	alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.0	0.1	GO:0050220	prostaglandin-E synthase activity(GO:0050220)
0.0	0.1	GO:0001605	adrenomedullin receptor activity(GO:0001605)
0.0	0.2	GO:0016494	C-X-C chemokine receptor activity(GO:0016494)
0.0	0.2	GO:0016175	superoxide-generating NADPH oxidase activity(GO:0016175)
0.0	0.2	GO:0019957	C-C chemokine binding(GO:0019957)
0.0	0.1	GO:0004920	interleukin-10 receptor activity(GO:0004920)
0.0	0.0	GO:0008073	ornithine decarboxylase inhibitor activity(GO:0008073)
0.0	0.1	GO:0031798	type 1 metabotropic glutamate receptor binding(GO:0031798)
0.0	0.0	GO:0030023	extracellular matrix constituent conferring elasticity(GO:0030023)
0.0	0.1	GO:0036435	K48-linked polyubiquitin binding(GO:0036435)
0.0	0.0	GO:0004925	prolactin receptor activity(GO:0004925)
0.0	0.1	GO:0070996	type 1 melanocortin receptor binding(GO:0070996)
0.0	0.1	GO:0042289	MHC class II protein binding(GO:0042289)
0.0	0.1	GO:0015129	lactate transmembrane transporter activity(GO:0015129)
0.0	0.1	GO:0004969	histamine receptor activity(GO:0004969)
0.0	0.2	GO:0019864	IgG binding(GO:0019864)
0.0	0.1	GO:0035614	snRNA stem-loop binding(GO:0035614)
0.0	0.1	GO:0035473	lipase binding(GO:0035473)
0.0	0.0	GO:0004807	triose-phosphate isomerase activity(GO:0004807)
0.0	0.0	GO:0032422	purine-rich negative regulatory element binding(GO:0032422)
0.0	0.1	GO:1990254	keratin filament binding(GO:1990254)
0.0	0.1	GO:0046979	TAP binding(GO:0046977) TAP1 binding(GO:0046978) TAP2 binding(GO:0046979)
0.0	0.1	GO:0004634	phosphopyruvate hydratase activity(GO:0004634)
0.0	0.1	GO:0031726	CCR1 chemokine receptor binding(GO:0031726) receptor antagonist activity(GO:0048019)
0.0	0.1	GO:0070324	thyroid hormone binding(GO:0070324)
0.0	0.0	GO:0004668	protein-arginine deiminase activity(GO:0004668)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.3	PID NFKAPPAB ATYPICAL PATHWAY	Atypical NF-kappaB pathway
0.0	0.3	PID IL27 PATHWAY	IL27-mediated signaling events
0.0	0.1	ST GRANULE CELL SURVIVAL PATHWAY	Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway.
0.0	0.2	PID TCR JNK PATHWAY	JNK signaling in the CD4+ TCR pathway
0.0	0.4	PID P38 MKK3 6PATHWAY	p38 MAPK signaling pathway
0.0	0.3	PID IL23 PATHWAY	IL23-mediated signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.0	REACTOME NFKB IS ACTIVATED AND SIGNALS SURVIVAL	Genes involved in NF-kB is activated and signals survival
0.0	1.2	REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES	Genes involved in Chemokine receptors bind chemokines
0.0	0.0	REACTOME ACTIVATED TAK1 MEDIATES P38 MAPK ACTIVATION	Genes involved in activated TAK1 mediates p38 MAPK activation
0.0	0.1	REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION	Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression