GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Ppard Links NCBI RGD Ensembl	ENSRNOG00000000503	peroxisome proliferator-activated receptor delta

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Ppard	rn6_v1_chr20_+_7821755_7821755	-0.58	3.1e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr10_+_11146359 Show fit	0.03	ENSRNOT00000006314	Pam16 Links NCBI RGD Ensembl Show fit	presequence translocase associated motor 16 homolog
chrX_-_113584459 Show fit	0.02	ENSRNOT00000025923	Kcne5 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily E regulatory subunit 5
chr6_+_26051396 Show fit	0.02	ENSRNOT00000006452	Rbks Links NCBI RGD Ensembl Show fit	ribokinase
chr3_-_60813869 Show fit	0.02	ENSRNOT00000058234	Atp5g3 Links NCBI RGD Ensembl Show fit	ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)
chr7_+_11490852 Show fit	0.02	ENSRNOT00000044484	Creb3l3 Links NCBI RGD Ensembl Show fit	cAMP responsive element binding protein 3-like 3
chr2_+_198965685 Show fit	0.02	ENSRNOT00000000107 ENSRNOT00000091578	Pdzk1 Links NCBI RGD Ensembl Show fit	PDZ domain containing 1
chr13_+_96219853 Show fit	0.02	ENSRNOT00000006154	Cox20 Links NCBI RGD Ensembl Show fit	COX20 cytochrome C oxidase assembly factor
chr13_+_89975267 Show fit	0.02	ENSRNOT00000006266 ENSRNOT00000000053	Cd244 Links NCBI RGD Ensembl Show fit	CD244 molecule
chr15_-_35113678 Show fit	0.02	ENSRNOT00000059677	Ctsg Links NCBI RGD Ensembl Show fit	cathepsin G
chr3_+_22640545 Show fit	0.01	ENSRNOT00000064507 ENSRNOT00000014452	Lhx2 Links NCBI RGD Ensembl Show fit	LIM homeobox 2
chr13_+_89774764 Show fit	0.01	ENSRNOT00000005619	Arhgap30 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 30
chr20_-_3819200 Show fit	0.01	ENSRNOT00000000542 ENSRNOT00000081486	Hsd17b8 Links NCBI RGD Ensembl Show fit	hydroxysteroid (17-beta) dehydrogenase 8
chr2_+_200452624 Show fit	0.01	ENSRNOT00000026121	Hmgcs2 Links NCBI RGD Ensembl Show fit	3-hydroxy-3-methylglutaryl-CoA synthase 2
chr8_+_117170620 Show fit	0.01	ENSRNOT00000075271	LOC498675 Links NCBI RGD Ensembl Show fit	hypothetical LOC498675
chr5_+_137257287 Show fit	0.01	ENSRNOT00000037160	Elovl1 Links NCBI RGD Ensembl Show fit	ELOVL fatty acid elongase 1
chr11_-_24294179 Show fit	0.01	ENSRNOT00000002116	Atp5j Links NCBI RGD Ensembl Show fit	ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6
chr5_+_137257637 Show fit	0.01	ENSRNOT00000093001	Elovl1 Links NCBI RGD Ensembl Show fit	ELOVL fatty acid elongase 1
chr8_+_117455262 Show fit	0.01	ENSRNOT00000027520	Slc25a20 Links NCBI RGD Ensembl Show fit	solute carrier family 25 member 20
chr19_+_49637016 Show fit	0.01	ENSRNOT00000016880	Bco1 Links NCBI RGD Ensembl Show fit	beta-carotene oxygenase 1
chr1_+_48273611 Show fit	0.01	ENSRNOT00000022254 ENSRNOT00000022068	Slc22a1 Links NCBI RGD Ensembl Show fit	solute carrier family 22 member 1
chr5_-_167244786 Show fit	0.01	ENSRNOT00000051309	Car6 Links NCBI RGD Ensembl Show fit	carbonic anhydrase 6
chr13_+_99004942 Show fit	0.01	ENSRNOT00000085390	Acbd3 Links NCBI RGD Ensembl Show fit	acyl-CoA binding domain containing 3
chr1_+_212558257 Show fit	0.01	ENSRNOT00000024912	Prap1 Links NCBI RGD Ensembl Show fit	proline-rich acidic protein 1
chr7_-_143793970 Show fit	0.01	ENSRNOT00000016205	Csad Links NCBI RGD Ensembl Show fit	cysteine sulfinic acid decarboxylase
chr7_-_117605141 Show fit	0.01	ENSRNOT00000035199	Fbxl6 Links NCBI RGD Ensembl Show fit	F-box and leucine-rich repeat protein 6
chr2_+_95045034 Show fit	0.01	ENSRNOT00000081305	Mrps28 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein S28
chr8_+_59164572 Show fit	0.00	ENSRNOT00000015102	Idh3a Links NCBI RGD Ensembl Show fit	isocitrate dehydrogenase 3 (NAD+) alpha
chr1_-_144601327 Show fit	0.00	ENSRNOT00000029244 ENSRNOT00000078144	Saxo2 Links NCBI RGD Ensembl Show fit	stabilizer of axonemal microtubules 2
chr9_+_64095978 Show fit	0.00	ENSRNOT00000021533	Maip1 Links NCBI RGD Ensembl Show fit	matrix AAA peptidase interacting protein 1
chr5_-_139931366 Show fit	0.00	ENSRNOT00000015250	Smap2 Links NCBI RGD Ensembl Show fit	small ArfGAP2
chr2_-_144323254 Show fit	0.00	ENSRNOT00000018780	Sertm1 Links NCBI RGD Ensembl Show fit	serine-rich and transmembrane domain containing 1
chr10_+_31508512 Show fit	0.00	ENSRNOT00000031580	Fam71b Links NCBI RGD Ensembl Show fit	family with sequence similarity 71, member B
chr3_+_81287242 Show fit	0.00	ENSRNOT00000086530	Pex16 Links NCBI RGD Ensembl Show fit	peroxisomal biogenesis factor 16
chr5_+_57738321 Show fit	0.00	ENSRNOT00000063849	Ubap1 Links NCBI RGD Ensembl Show fit	ubiquitin-associated protein 1
chr9_+_81783349 Show fit	0.00	ENSRNOT00000021548	Cnot9 Links NCBI RGD Ensembl Show fit	CCR4-NOT transcription complex subunit 9
chr2_+_211050360 Show fit	0.00	ENSRNOT00000026928	Psma5 Links NCBI RGD Ensembl Show fit	proteasome subunit alpha 5
chr3_-_161272460 Show fit	0.00	ENSRNOT00000020740	Acot8 Links NCBI RGD Ensembl Show fit	acyl-CoA thioesterase 8
chr7_-_143793774 Show fit	0.00	ENSRNOT00000079678	Csad Links NCBI RGD Ensembl Show fit	cysteine sulfinic acid decarboxylase
chr5_+_150032999 Show fit	0.00	ENSRNOT00000013301	Srsf4 Links NCBI RGD Ensembl Show fit	serine and arginine rich splicing factor 4
chr12_-_30566032 Show fit	0.00	ENSRNOT00000093378	Gbas Links NCBI RGD Ensembl Show fit	glioblastoma amplified sequence
chr1_-_219853329 Show fit	0.00	ENSRNOT00000026169	Lrfn4 Links NCBI RGD Ensembl Show fit	leucine rich repeat and fibronectin type III domain containing 4
chr12_+_47254484 Show fit	0.00	ENSRNOT00000001556	Acads Links NCBI RGD Ensembl Show fit	acyl-CoA dehydrogenase, C-2 to C-3 short chain
chr10_-_88107232 Show fit	0.00	ENSRNOT00000019330 ENSRNOT00000076770	Krt9 Links NCBI RGD Ensembl Show fit	keratin 9
chr14_-_84937725 Show fit	0.00	ENSRNOT00000083839	Uqcr10 Links NCBI RGD Ensembl Show fit	ubiquinol-cytochrome c reductase, complex III subunit X
chr6_+_110968061 Show fit	0.00	ENSRNOT00000014980	Cipc Links NCBI RGD Ensembl Show fit	CLOCK-interacting pacemaker
chr1_-_153096269 Show fit	0.00	ENSRNOT00000022578	Tmem135 Links NCBI RGD Ensembl Show fit	transmembrane protein 135
chr14_-_79464770 Show fit	0.00	ENSRNOT00000008932	Grpel1 Links NCBI RGD Ensembl Show fit	GrpE-like 1, mitochondrial
chr7_+_35069814 Show fit	0.00	ENSRNOT00000089228	Nr2c1 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 2, group C, member 1
chr6_-_26051229 Show fit	0.00	ENSRNOT00000005855	Bre Links NCBI RGD Ensembl Show fit	brain and reproductive organ-expressed (TNFRSF1A modulator)
chr5_+_76812931 Show fit	0.00	ENSRNOT00000059458	Hsdl2 Links NCBI RGD Ensembl Show fit	hydroxysteroid dehydrogenase like 2
chr5_+_57947716 Show fit	0.00	ENSRNOT00000067657	Dnai1 Links NCBI RGD Ensembl Show fit	dynein, axonemal, intermediate chain 1
chr1_-_222178725 Show fit	0.00	ENSRNOT00000028697	Esrra Links NCBI RGD Ensembl Show fit	estrogen related receptor, alpha
chr1_+_255842783 Show fit	0.00	ENSRNOT00000023562	March5 Links NCBI RGD Ensembl Show fit	membrane associated ring-CH-type finger 5

View svg image
View png image