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GSE49485: Hypoxia transcriptome sequencing of rat brain.
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Results for Pou3f4
Z-value: 0.46
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Transcription factors associated with Pou3f4
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Pou3f4 | rn6_v1_chrX_+_82143789_82143789 | 0.85 | 6.7e-02 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr7_-_124929025 Show fit | 0.16 |
ENSRNOT00000015447
|
EF-hand calcium binding domain 6 |
|
| chr6_+_106052212 Show fit | 0.15 |
ENSRNOT00000010626
|
signal-induced proliferation-associated 1 like 1 |
|
| chr2_-_104461863 Show fit | 0.14 |
ENSRNOT00000016953
|
corticotropin releasing hormone |
|
| chr5_-_153840178 Show fit | 0.13 |
ENSRNOT00000025075
|
NIPA-like domain containing 3 |
|
| chr6_+_29518416 Show fit | 0.12 |
ENSRNOT00000078660
|
|
|
| chr1_+_151439409 Show fit | 0.11 |
ENSRNOT00000022060
ENSRNOT00000050639 |
glutamate metabotropic receptor 5 |
|
| chr7_-_93502571 Show fit | 0.11 |
ENSRNOT00000077033
ENSRNOT00000076080 |
sterile alpha motif domain containing 12 |
|
| chr7_+_120923274 Show fit | 0.11 |
ENSRNOT00000049247
|
GTP binding protein 1 |
|
| chr16_-_81880502 Show fit | 0.11 |
ENSRNOT00000079096
|
MCF.2 cell line derived transforming sequence-like |
|
| chr2_+_22909569 Show fit | 0.11 |
ENSRNOT00000073871
|
homer scaffolding protein 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Pou3f4
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0099553 | trans-synaptic signaling by lipid, modulating synaptic transmission(GO:0099552) trans-synaptic signaling by endocannabinoid, modulating synaptic transmission(GO:0099553) |
| 0.0 | 0.1 | GO:0008628 | hormone-mediated apoptotic signaling pathway(GO:0008628) negative regulation of glucagon secretion(GO:0070093) |
| 0.0 | 0.1 | GO:0070563 | negative regulation of vitamin D receptor signaling pathway(GO:0070563) |
| 0.0 | 0.1 | GO:1902595 | regulation of DNA replication origin binding(GO:1902595) |
| 0.0 | 0.1 | GO:0010982 | regulation of high-density lipoprotein particle clearance(GO:0010982) positive regulation of lipoprotein particle clearance(GO:0010986) |
| 0.0 | 0.1 | GO:0044268 | multicellular organismal protein metabolic process(GO:0044268) malonyl-CoA biosynthetic process(GO:2001295) |
| 0.0 | 0.1 | GO:0042078 | germ-line stem cell division(GO:0042078) male germ-line stem cell asymmetric division(GO:0048133) germline stem cell asymmetric division(GO:0098728) |
| 0.0 | 0.1 | GO:0051643 | endoplasmic reticulum localization(GO:0051643) |
| 0.0 | 0.1 | GO:0042262 | dGTP catabolic process(GO:0006203) DNA protection(GO:0042262) |
| 0.0 | 0.1 | GO:0016576 | histone dephosphorylation(GO:0016576) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0045203 | intrinsic component of cell outer membrane(GO:0031230) integral component of cell outer membrane(GO:0045203) |
| 0.0 | 0.1 | GO:0061673 | mitotic spindle astral microtubule(GO:0061673) |
| 0.0 | 0.1 | GO:0042642 | actomyosin, myosin complex part(GO:0042642) |
| 0.0 | 0.1 | GO:0034388 | Pwp2p-containing subcomplex of 90S preribosome(GO:0034388) |
| 0.0 | 0.1 | GO:0071439 | clathrin complex(GO:0071439) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0051431 | corticotropin-releasing hormone receptor 2 binding(GO:0051431) |
| 0.0 | 0.1 | GO:0099583 | neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration(GO:0099583) |
| 0.0 | 0.1 | GO:0031802 | type 5 metabotropic glutamate receptor binding(GO:0031802) |
| 0.0 | 0.1 | GO:0035539 | 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity(GO:0008413) 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity(GO:0035539) |
| 0.0 | 0.1 | GO:0003989 | acetyl-CoA carboxylase activity(GO:0003989) |
| 0.0 | 0.1 | GO:0035033 | histone deacetylase regulator activity(GO:0035033) |
| 0.0 | 0.1 | GO:0008970 | phosphatidylcholine 1-acylhydrolase activity(GO:0008970) |
| 0.0 | 0.0 | GO:0003976 | UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity(GO:0003976) |
| 0.0 | 0.0 | GO:0072320 | volume-sensitive chloride channel activity(GO:0072320) |
| 0.0 | 0.0 | GO:0004719 | protein-L-isoaspartate (D-aspartate) O-methyltransferase activity(GO:0004719) |