GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Plag1 Links NCBI RGD Ensembl	ENSRNOG00000008846	PLAG1 zinc finger

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Plag1	rn6_v1_chr5_-_16799776_16799776	-0.38	5.3e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr6_+_135856218 Show fit	0.36	ENSRNOT00000066715	RGD1560608 Links NCBI RGD Ensembl Show fit	similar to novel protein
chr5_-_151709877 Show fit	0.30	ENSRNOT00000080602	Trnp1 Links NCBI RGD Ensembl Show fit	TMF1-regulated nuclear protein 1
chr5_-_156811650 Show fit	0.19	ENSRNOT00000068065	Fam43b Links NCBI RGD Ensembl Show fit	family with sequence similarity 43, member B
chr7_+_120580743 Show fit	0.19	ENSRNOT00000017181	Maff Links NCBI RGD Ensembl Show fit	MAF bZIP transcription factor F
chr7_+_142912316 Show fit	0.19	ENSRNOT00000010171	Nr4a1 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 4, group A, member 1
chr1_+_81372650 Show fit	0.19	ENSRNOT00000088829	Zfp428 Links NCBI RGD Ensembl Show fit	zinc finger protein 428
chr13_+_52887649 Show fit	0.19	ENSRNOT00000048033	Ascl5 Links NCBI RGD Ensembl Show fit	achaete-scute family bHLH transcription factor 5
chr1_+_221792221 Show fit	0.18	ENSRNOT00000054828	Nrxn2 Links NCBI RGD Ensembl Show fit	neurexin 2
chr1_-_80544825 Show fit	0.18	ENSRNOT00000057802 ENSRNOT00000040060 ENSRNOT00000067049 ENSRNOT00000052387 ENSRNOT00000073352	Relb Links NCBI RGD Ensembl Show fit	RELB proto-oncogene, NF-kB subunit
chr8_+_59344083 Show fit	0.18	ENSRNOT00000031175	Crabp1 Links NCBI RGD Ensembl Show fit	cellular retinoic acid binding protein 1
chrX_-_138148967 Show fit	0.17	ENSRNOT00000033968	Frmd7 Links NCBI RGD Ensembl Show fit	FERM domain containing 7
chr3_-_13435979 Show fit	0.17	ENSRNOT00000029600	Pbx3 Links NCBI RGD Ensembl Show fit	PBX homeobox 3
chr20_+_5049496 Show fit	0.17	ENSRNOT00000088251 ENSRNOT00000001118	Ddah2 Links NCBI RGD Ensembl Show fit	dimethylarginine dimethylaminohydrolase 2
chr3_+_110982553 Show fit	0.16	ENSRNOT00000030754	LOC691418 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC691418
chr19_-_25961666 Show fit	0.16	ENSRNOT00000004091	Calr Links NCBI RGD Ensembl Show fit	calreticulin
chr3_-_72289310 Show fit	0.16	ENSRNOT00000038250	Rtn4rl2 Links NCBI RGD Ensembl Show fit	reticulon 4 receptor-like 2
chr12_+_47193964 Show fit	0.16	ENSRNOT00000001552 ENSRNOT00000039281	Cabp1 Links NCBI RGD Ensembl Show fit	calcium binding protein 1
chr8_-_33661049 Show fit	0.15	ENSRNOT00000068037	Fli1 Links NCBI RGD Ensembl Show fit	Fli-1 proto-oncogene, ETS transcription factor
chr10_-_17075139 Show fit	0.14	ENSRNOT00000039398	Neurl1b Links NCBI RGD Ensembl Show fit	neuralized E3 ubiquitin protein ligase 1B
chr11_-_36479868 Show fit	0.14	ENSRNOT00000075762	LOC100911295 Links NCBI RGD Ensembl Show fit	non-histone chromosomal protein HMG-14-like
chr15_-_34469746 Show fit	0.13	ENSRNOT00000027719	Adcy4 Links NCBI RGD Ensembl Show fit	adenylate cyclase 4
chr1_+_80135391 Show fit	0.13	ENSRNOT00000021893	Gpr4 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 4
chr7_+_70364813 Show fit	0.13	ENSRNOT00000084012 ENSRNOT00000031230	Agap2 Links NCBI RGD Ensembl Show fit	ArfGAP with GTPase domain, ankyrin repeat and PH domain 2
chr7_-_12424367 Show fit	0.13	ENSRNOT00000060698	Midn Links NCBI RGD Ensembl Show fit	midnolin
chr3_-_160853650 Show fit	0.13	ENSRNOT00000018844	Matn4 Links NCBI RGD Ensembl Show fit	matrilin 4
chr20_+_7136007 Show fit	0.13	ENSRNOT00000000580	Hmga1 Links NCBI RGD Ensembl Show fit	high mobility group AT-hook 1
chr18_-_28454756 Show fit	0.13	ENSRNOT00000040091	Spata24 Links NCBI RGD Ensembl Show fit	spermatogenesis associated 24
chr6_-_135939534 Show fit	0.12	ENSRNOT00000052237	Diras3 Links NCBI RGD Ensembl Show fit	DIRAS family GTPase 3
chr5_-_148355406 Show fit	0.12	ENSRNOT00000018674	Hcrtr1 Links NCBI RGD Ensembl Show fit	hypocretin receptor 1
chr1_+_276659542 Show fit	0.12	ENSRNOT00000019681	Tcf7l2 Links NCBI RGD Ensembl Show fit	transcription factor 7 like 2
chr6_-_138093643 Show fit	0.12	ENSRNOT00000045874	Igh-6 Links NCBI RGD Ensembl Show fit	immunoglobulin heavy chain 6
chr1_+_101783621 Show fit	0.11	ENSRNOT00000067679	Lmtk3 Links NCBI RGD Ensembl Show fit	lemur tyrosine kinase 3
chr1_-_80599572 Show fit	0.11	ENSRNOT00000024832	Apoc4 Links NCBI RGD Ensembl Show fit	apolipoprotein C4
chr1_+_222519615 Show fit	0.11	ENSRNOT00000083585	Rcor2 Links NCBI RGD Ensembl Show fit	REST corepressor 2
chr9_+_82674202 Show fit	0.11	ENSRNOT00000027208	Tmem198 Links NCBI RGD Ensembl Show fit	transmembrane protein 198
chr4_+_99239115 Show fit	0.11	ENSRNOT00000009515	Cd8a Links NCBI RGD Ensembl Show fit	CD8a molecule
chr7_-_11777503 Show fit	0.10	ENSRNOT00000026220	Amh Links NCBI RGD Ensembl Show fit	anti-Mullerian hormone
chr12_-_22680630 Show fit	0.10	ENSRNOT00000041808	Vgf Links NCBI RGD Ensembl Show fit	VGF nerve growth factor inducible
chr11_+_31389514 Show fit	0.10	ENSRNOT00000000325	Olig2 Links NCBI RGD Ensembl Show fit	oligodendrocyte lineage transcription factor 2
chr2_+_188844073 Show fit	0.10	ENSRNOT00000028117	Kcnn3 Links NCBI RGD Ensembl Show fit	potassium calcium-activated channel subfamily N member 3
chr7_-_11648322 Show fit	0.10	ENSRNOT00000026871	Gadd45b Links NCBI RGD Ensembl Show fit	growth arrest and DNA-damage-inducible, beta
chr10_-_90393317 Show fit	0.10	ENSRNOT00000028563	Fam171a2 Links NCBI RGD Ensembl Show fit	family with sequence similarity 171, member A2
chr15_-_34469350 Show fit	0.10	ENSRNOT00000067536	Adcy4 Links NCBI RGD Ensembl Show fit	adenylate cyclase 4
chr1_-_84491466 Show fit	0.10	ENSRNOT00000034609	Map3k10 Links NCBI RGD Ensembl Show fit	mitogen activated protein kinase kinase kinase 10
chr8_+_71822129 Show fit	0.10	ENSRNOT00000089147	Dapk2 Links NCBI RGD Ensembl Show fit	death-associated protein kinase 2
chr15_-_4035064 Show fit	0.10	ENSRNOT00000012300	Fut11 Links NCBI RGD Ensembl Show fit	fucosyltransferase 11
chr1_+_101178104 Show fit	0.10	ENSRNOT00000028072	Pth2 Links NCBI RGD Ensembl Show fit	parathyroid hormone 2
chr6_-_25616995 Show fit	0.10	ENSRNOT00000077894	Fosl2 Links NCBI RGD Ensembl Show fit	FOS like 2, AP-1 transcription factor subunit
chr17_+_49417067 Show fit	0.10	ENSRNOT00000090024	Pou6f2 Links NCBI RGD Ensembl Show fit	POU domain, class 6, transcription factor 2
chr1_+_91152635 Show fit	0.09	ENSRNOT00000073438	LOC100912070 Links NCBI RGD Ensembl Show fit	dermokine-like
chr15_+_51756978 Show fit	0.09	ENSRNOT00000024067	Egr3 Links NCBI RGD Ensembl Show fit	early growth response 3
chr16_-_20486707 Show fit	0.09	ENSRNOT00000026470	Jund Links NCBI RGD Ensembl Show fit	JunD proto-oncogene, AP-1 transcription factor subunit
chr1_-_32362359 Show fit	0.09	ENSRNOT00000079987	Slc6a3 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 3
chr19_-_10620671 Show fit	0.09	ENSRNOT00000021842	Ccl17 Links NCBI RGD Ensembl Show fit	C-C motif chemokine ligand 17
chr18_-_325374 Show fit	0.09	ENSRNOT00000078032 ENSRNOT00000003638	Mtmr1 Links NCBI RGD Ensembl Show fit	myotubularin related protein 1
chr2_-_45518502 Show fit	0.09	ENSRNOT00000014627	Hspb3 Links NCBI RGD Ensembl Show fit	heat shock protein family B (small) member 3
chr6_-_60054279 Show fit	0.09	ENSRNOT00000005988	Scin Links NCBI RGD Ensembl Show fit	scinderin
chr19_-_37916813 Show fit	0.09	ENSRNOT00000026585	Lcat Links NCBI RGD Ensembl Show fit	lecithin cholesterol acyltransferase
chr2_-_198719202 Show fit	0.09	ENSRNOT00000028801	Polr3gl Links NCBI RGD Ensembl Show fit	RNA polymerase III subunit G like
chr3_-_164095878 Show fit	0.09	ENSRNOT00000079414	B4galt5 Links NCBI RGD Ensembl Show fit	beta-1,4-galactosyltransferase 5
chr20_+_4414276 Show fit	0.08	ENSRNOT00000000492	Atf6b Links NCBI RGD Ensembl Show fit	activating transcription factor 6 beta
chr6_-_46631983 Show fit	0.08	ENSRNOT00000045963	Sox11 Links NCBI RGD Ensembl Show fit	SRY box 11
chr10_+_75088422 Show fit	0.08	ENSRNOT00000081951	Mpo Links NCBI RGD Ensembl Show fit	myeloperoxidase
chr5_-_151396507 Show fit	0.08	ENSRNOT00000012710	Gpr3 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 3
chr10_-_108196217 Show fit	0.08	ENSRNOT00000075440	Cbx4 Links NCBI RGD Ensembl Show fit	chromobox 4
chr10_+_55687050 Show fit	0.08	ENSRNOT00000057136	Per1 Links NCBI RGD Ensembl Show fit	period circadian clock 1
chr10_+_86950557 Show fit	0.08	ENSRNOT00000014153	Igfbp4 Links NCBI RGD Ensembl Show fit	insulin-like growth factor binding protein 4
chr4_-_77489535 Show fit	0.08	ENSRNOT00000008728	Pdia4 Links NCBI RGD Ensembl Show fit	protein disulfide isomerase family A, member 4
chr3_-_72171078 Show fit	0.08	ENSRNOT00000009817	Serping1 Links NCBI RGD Ensembl Show fit	serpin family G member 1
chr10_-_13580821 Show fit	0.08	ENSRNOT00000009735	Ntn3 Links NCBI RGD Ensembl Show fit	netrin 3
chr9_+_43331155 Show fit	0.08	ENSRNOT00000023036	Zap70 Links NCBI RGD Ensembl Show fit	zeta chain of T cell receptor associated protein kinase 70
chr10_-_50402616 Show fit	0.08	ENSRNOT00000004546	Hs3st3b1 Links NCBI RGD Ensembl Show fit	heparan sulfate-glucosamine 3-sulfotransferase 3B1
chr6_-_92760018 Show fit	0.08	ENSRNOT00000009560	Trim9 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 9
chrX_+_68782872 Show fit	0.08	ENSRNOT00000075995	Stard8 Links NCBI RGD Ensembl Show fit	StAR-related lipid transfer domain containing 8
chr1_+_256370850 Show fit	0.08	ENSRNOT00000030962	Cyp26c1 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 26, subfamily C, polypeptide 1
chr10_-_64657089 Show fit	0.08	ENSRNOT00000080703	Abr Links NCBI RGD Ensembl Show fit	active BCR-related
chr3_+_154395187 Show fit	0.08	ENSRNOT00000050810	Vstm2l Links NCBI RGD Ensembl Show fit	V-set and transmembrane domain containing 2 like
chr10_-_90030423 Show fit	0.07	ENSRNOT00000092150	Mpp2 Links NCBI RGD Ensembl Show fit	membrane palmitoylated protein 2
chr10_+_55927223 Show fit	0.07	ENSRNOT00000011523	Kcnab3 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily A regulatory beta subunit 3
chr13_-_89594738 Show fit	0.07	ENSRNOT00000004641	Tomm40l Links NCBI RGD Ensembl Show fit	translocase of outer mitochondrial membrane 40 like
chr4_+_58053041 Show fit	0.07	ENSRNOT00000072698	Mest Links NCBI RGD Ensembl Show fit	mesoderm specific transcript
chr4_+_7377563 Show fit	0.07	ENSRNOT00000084826	Kcnh2 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily H member 2
chr5_-_79222687 Show fit	0.07	ENSRNOT00000010516	Akna Links NCBI RGD Ensembl Show fit	AT-hook transcription factor
chr1_-_88989552 Show fit	0.07	ENSRNOT00000034001	Arhgap33 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 33
chr7_-_24668250 Show fit	0.07	ENSRNOT00000083806	Tmem263 Links NCBI RGD Ensembl Show fit	transmembrane protein 263
chr1_+_86873253 Show fit	0.07	ENSRNOT00000071239	Fbxo27 Links NCBI RGD Ensembl Show fit	F-box protein 27
chr20_-_4921348 Show fit	0.07	ENSRNOT00000082497 ENSRNOT00000041151	RT1-CE4 Links NCBI RGD Ensembl Show fit	RT1 class I, locus CE4
chr5_-_20189721 Show fit	0.07	ENSRNOT00000014661	Tox Links NCBI RGD Ensembl Show fit	thymocyte selection-associated high mobility group box
chr7_+_11054333 Show fit	0.07	ENSRNOT00000007202	Gna15 Links NCBI RGD Ensembl Show fit	guanine nucleotide binding protein, alpha 15
chr10_-_85517683 Show fit	0.07	ENSRNOT00000016070	Srcin1 Links NCBI RGD Ensembl Show fit	SRC kinase signaling inhibitor 1
chr15_-_14737704 Show fit	0.07	ENSRNOT00000011307	Synpr Links NCBI RGD Ensembl Show fit	synaptoporin
chr13_-_52197205 Show fit	0.07	ENSRNOT00000009712	Shisa4 Links NCBI RGD Ensembl Show fit	shisa family member 4
chr11_-_32508420 Show fit	0.07	ENSRNOT00000002717	Kcne1 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily E regulatory subunit 1
chrX_-_14890606 Show fit	0.07	ENSRNOT00000049864	RGD1560784 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA B630019K06
chr10_-_91302155 Show fit	0.07	ENSRNOT00000004371	Spata32 Links NCBI RGD Ensembl Show fit	spermatogenesis associated 32
chrX_-_78496847 Show fit	0.07	ENSRNOT00000003265	Itm2a Links NCBI RGD Ensembl Show fit	integral membrane protein 2A
chr17_+_26785029 Show fit	0.06	ENSRNOT00000022065	Eef1e1 Links NCBI RGD Ensembl Show fit	eukaryotic translation elongation factor 1 epsilon 1
chr11_-_87485833 Show fit	0.06	ENSRNOT00000079948	AABR07034751.1 Links NCBI RGD Ensembl Show fit
chr2_-_187771857 Show fit	0.06	ENSRNOT00000092517 ENSRNOT00000035383	Pmf1 Links NCBI RGD Ensembl Show fit	polyamine-modulated factor 1
chr1_+_247398598 Show fit	0.06	ENSRNOT00000087011	Jak2 Links NCBI RGD Ensembl Show fit	Janus kinase 2
chr3_-_2411544 Show fit	0.06	ENSRNOT00000012406	Tor4a Links NCBI RGD Ensembl Show fit	torsin family 4, member A
chr1_+_140601791 Show fit	0.06	ENSRNOT00000091588	Isg20 Links NCBI RGD Ensembl Show fit	interferon stimulated exonuclease gene 20
chr11_-_73678984 Show fit	0.06	ENSRNOT00000002355	Fam43a Links NCBI RGD Ensembl Show fit	family with sequence similarity 43, member A
chr1_-_199037267 Show fit	0.06	ENSRNOT00000078779	Ccdc189 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 189
chr1_+_101410019 Show fit	0.06	ENSRNOT00000042039	Lhb Links NCBI RGD Ensembl Show fit	luteinizing hormone beta polypeptide
chr6_+_28382962 Show fit	0.06	ENSRNOT00000016976	Pomc Links NCBI RGD Ensembl Show fit	proopiomelanocortin
chr13_-_81214494 Show fit	0.06	ENSRNOT00000004950 ENSRNOT00000082385	Prrx1 Links NCBI RGD Ensembl Show fit	paired related homeobox 1
chr3_-_148932878 Show fit	0.06	ENSRNOT00000013881	Nol4l Links NCBI RGD Ensembl Show fit	nucleolar protein 4-like
chr1_-_199655147 Show fit	0.06	ENSRNOT00000026979	LOC103691238 Links NCBI RGD Ensembl Show fit	zinc finger protein 239-like
chr20_-_5533448 Show fit	0.06	ENSRNOT00000000568	Cuta Links NCBI RGD Ensembl Show fit	cutA divalent cation tolerance homolog
chr5_+_139038134 Show fit	0.06	ENSRNOT00000078155	Hivep3 Links NCBI RGD Ensembl Show fit	human immunodeficiency virus type I enhancer binding protein 3
chr5_-_139227196 Show fit	0.06	ENSRNOT00000050941	Foxo6 Links NCBI RGD Ensembl Show fit	forkhead box O6
chr20_-_5533600 Show fit	0.06	ENSRNOT00000072319	Cuta Links NCBI RGD Ensembl Show fit	cutA divalent cation tolerance homolog
chr6_-_132958546 Show fit	0.06	ENSRNOT00000041903	Begain Links NCBI RGD Ensembl Show fit	brain-enriched guanylate kinase-associated
chr9_+_82647071 Show fit	0.06	ENSRNOT00000027135	Asic4 Links NCBI RGD Ensembl Show fit	acid sensing ion channel subunit family member 4
chr8_-_78233430 Show fit	0.06	ENSRNOT00000083220	Cgnl1 Links NCBI RGD Ensembl Show fit	cingulin-like 1
chr19_+_56220755 Show fit	0.06	ENSRNOT00000023452	Tubb3 Links NCBI RGD Ensembl Show fit	tubulin, beta 3 class III
chr1_-_88066101 Show fit	0.06	ENSRNOT00000079473 ENSRNOT00000027893	Ryr1 Links NCBI RGD Ensembl Show fit	ryanodine receptor 1
chr19_-_56037077 Show fit	0.06	ENSRNOT00000021968	Spata2L Links NCBI RGD Ensembl Show fit	spermatogenesis associated 2-like
chr14_-_84393421 Show fit	0.06	ENSRNOT00000006911	Ccdc157 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 157
chr2_+_198303168 Show fit	0.06	ENSRNOT00000056262	Mtmr11 Links NCBI RGD Ensembl Show fit	myotubularin related protein 11
chr13_-_72890841 Show fit	0.06	ENSRNOT00000093726	RGD1304622 Links NCBI RGD Ensembl Show fit	similar to 6820428L09 protein
chr8_-_115358046 Show fit	0.06	ENSRNOT00000017607	Grm2 Links NCBI RGD Ensembl Show fit	glutamate metabotropic receptor 2
chr20_-_5931417 Show fit	0.06	ENSRNOT00000092383	Slc26a8 Links NCBI RGD Ensembl Show fit	solute carrier family 26 member 8
chr19_-_25288335 Show fit	0.06	ENSRNOT00000050214	Nanos3 Links NCBI RGD Ensembl Show fit	nanos C2HC-type zinc finger 3
chr17_+_49516429 Show fit	0.06	ENSRNOT00000048929	Tgif2-ps1 Links NCBI RGD Ensembl Show fit	TGFB-induced factor homeobox 2, pseudogene 1
chr20_+_5374985 Show fit	0.06	ENSRNOT00000052270	RT1-A2 Links NCBI RGD Ensembl Show fit	RT1 class Ia, locus A2
chr1_-_222189604 Show fit	0.06	ENSRNOT00000028704	Kcnk4 Links NCBI RGD Ensembl Show fit	potassium two pore domain channel subfamily K member 4
chr1_-_77893509 Show fit	0.06	ENSRNOT00000015059	Gltscr1 Links NCBI RGD Ensembl Show fit	glioma tumor suppressor candidate region gene 1
chr1_+_141767940 Show fit	0.06	ENSRNOT00000064034	Zfp710 Links NCBI RGD Ensembl Show fit	zinc finger protein 710
chr4_-_56786754 Show fit	0.06	ENSRNOT00000050795	Kcp Links NCBI RGD Ensembl Show fit	kielin/chordin-like protein
chr1_-_82580761 Show fit	0.06	ENSRNOT00000028131 ENSRNOT00000028132	Axl Links NCBI RGD Ensembl Show fit	Axl receptor tyrosine kinase
chr1_-_153752541 Show fit	0.06	ENSRNOT00000080927	Prss23 Links NCBI RGD Ensembl Show fit	protease, serine, 23
chr8_+_58870516 Show fit	0.06	ENSRNOT00000033900	Gldn Links NCBI RGD Ensembl Show fit	gliomedin
chr20_+_5535432 Show fit	0.06	ENSRNOT00000040859	Syngap1 Links NCBI RGD Ensembl Show fit	synaptic Ras GTPase activating protein 1
chr19_-_52499433 Show fit	0.05	ENSRNOT00000021954	Cotl1 Links NCBI RGD Ensembl Show fit	coactosin-like F-actin binding protein 1
chr1_-_101883744 Show fit	0.05	ENSRNOT00000028635	Syngr4 Links NCBI RGD Ensembl Show fit	synaptogyrin 4
chr4_+_113866804 Show fit	0.05	ENSRNOT00000081196	Loxl3 Links NCBI RGD Ensembl Show fit	lysyl oxidase-like 3
chr9_-_15214596 Show fit	0.05	ENSRNOT00000039102	Tfeb Links NCBI RGD Ensembl Show fit	transcription factor EB
chr18_+_36371041 Show fit	0.05	ENSRNOT00000025408	Sh3rf2 Links NCBI RGD Ensembl Show fit	SH3 domain containing ring finger 2
chr20_-_6500523 Show fit	0.05	ENSRNOT00000000629	Cpne5 Links NCBI RGD Ensembl Show fit	copine 5
chrX_+_15273933 Show fit	0.05	ENSRNOT00000075082	LOC108348091 Links NCBI RGD Ensembl Show fit	erythroid transcription factor
chr1_-_101351879 Show fit	0.05	ENSRNOT00000028142	Ppfia3 Links NCBI RGD Ensembl Show fit	PTPRF interacting protein alpha 3
chr11_-_83546674 Show fit	0.05	ENSRNOT00000044896	Ephb3 Links NCBI RGD Ensembl Show fit	Eph receptor B3
chr10_+_80953006 Show fit	0.05	ENSRNOT00000035567	Hnrnpa3 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein A3
chr9_+_82053581 Show fit	0.05	ENSRNOT00000086375	Wnt10a Links NCBI RGD Ensembl Show fit	wingless-type MMTV integration site family, member 10A
chrX_-_72133692 Show fit	0.05	ENSRNOT00000004263	Cited1 Links NCBI RGD Ensembl Show fit	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
chr2_+_187893875 Show fit	0.05	ENSRNOT00000093014	Mex3a Links NCBI RGD Ensembl Show fit	mex-3 RNA binding family member A
chr2_+_187512164 Show fit	0.05	ENSRNOT00000051394	Mef2d Links NCBI RGD Ensembl Show fit	myocyte enhancer factor 2D
chr7_+_12619774 Show fit	0.05	ENSRNOT00000015257	Med16 Links NCBI RGD Ensembl Show fit	mediator complex subunit 16
chr9_-_81469274 Show fit	0.05	ENSRNOT00000070827	Cxcr1 Links NCBI RGD Ensembl Show fit	C-X-C motif chemokine receptor 1
chr12_-_11265865 Show fit	0.05	ENSRNOT00000001315	Arpc1b Links NCBI RGD Ensembl Show fit	actin related protein 2/3 complex, subunit 1B
chr11_-_30428073 Show fit	0.05	ENSRNOT00000047741	Scaf4 Links NCBI RGD Ensembl Show fit	SR-related CTD-associated factor 4
chr3_-_155192806 Show fit	0.05	ENSRNOT00000051343	RGD1563145 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L13
chr3_-_162035614 Show fit	0.05	ENSRNOT00000047890	Zfp663 Links NCBI RGD Ensembl Show fit	zinc finger protein 663
chr12_+_23151180 Show fit	0.05	ENSRNOT00000059486	Cux1 Links NCBI RGD Ensembl Show fit	cut-like homeobox 1
chr5_-_161035368 Show fit	0.05	ENSRNOT00000091640	AABR07050321.2 Links NCBI RGD Ensembl Show fit
chr6_+_111180108 Show fit	0.05	ENSRNOT00000082027	Gstz1 Links NCBI RGD Ensembl Show fit	glutathione S-transferase zeta 1
chr5_-_172424081 Show fit	0.05	ENSRNOT00000019096	Plch2 Links NCBI RGD Ensembl Show fit	phospholipase C, eta 2
chr17_+_83221827 Show fit	0.05	ENSRNOT00000000155	Plxdc2 Links NCBI RGD Ensembl Show fit	plexin domain containing 2
chr19_+_25120128 Show fit	0.05	ENSRNOT00000081243	Samd1 Links NCBI RGD Ensembl Show fit	sterile alpha motif domain containing 1
chr7_-_70348780 Show fit	0.05	ENSRNOT00000072468	March9 Links NCBI RGD Ensembl Show fit	membrane associated ring-CH-type finger 9
chr1_-_86948845 Show fit	0.05	ENSRNOT00000027212	Nfkbib Links NCBI RGD Ensembl Show fit	NFKB inhibitor beta
chr8_+_44136496 Show fit	0.05	ENSRNOT00000087022	Scn3b Links NCBI RGD Ensembl Show fit	sodium voltage-gated channel beta subunit 3
chr13_+_24823488 Show fit	0.05	ENSRNOT00000019907	Cdh20 Links NCBI RGD Ensembl Show fit	cadherin 20
chr6_+_29977797 Show fit	0.05	ENSRNOT00000071784	Fkbp1b Links NCBI RGD Ensembl Show fit	FK506 binding protein 1B
chr12_+_47218969 Show fit	0.05	ENSRNOT00000081343 ENSRNOT00000038395	Unc119b Links NCBI RGD Ensembl Show fit	unc-119 lipid binding chaperone B
chr1_+_140602542 Show fit	0.05	ENSRNOT00000085570	Isg20 Links NCBI RGD Ensembl Show fit	interferon stimulated exonuclease gene 20
chr1_+_88113445 Show fit	0.05	ENSRNOT00000056955	Ggn Links NCBI RGD Ensembl Show fit	gametogenetin
chr1_+_72903257 Show fit	0.05	ENSRNOT00000086122	Ppp1r12c Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 12C
chr6_+_115170865 Show fit	0.05	ENSRNOT00000005671	Tshr Links NCBI RGD Ensembl Show fit	thyroid stimulating hormone receptor
chr12_-_41485122 Show fit	0.05	ENSRNOT00000001859	Ddx54 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 54
chr6_+_27589657 Show fit	0.05	ENSRNOT00000038649	Hadha Links NCBI RGD Ensembl Show fit	hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit
chr9_+_97355924 Show fit	0.05	ENSRNOT00000026558	Ackr3 Links NCBI RGD Ensembl Show fit	atypical chemokine receptor 3
chr20_-_28814636 Show fit	0.05	ENSRNOT00000086030	Sept10 Links NCBI RGD Ensembl Show fit	septin 10
chr10_-_58973020 Show fit	0.05	ENSRNOT00000020379	Smtnl2 Links NCBI RGD Ensembl Show fit	smoothelin-like 2
chr3_+_80362858 Show fit	0.05	ENSRNOT00000021353 ENSRNOT00000086242	Lrp4 Links NCBI RGD Ensembl Show fit	LDL receptor related protein 4
chr10_-_11131548 Show fit	0.05	ENSRNOT00000005490	Vasn Links NCBI RGD Ensembl Show fit	vasorin
chr10_+_43768708 Show fit	0.04	ENSRNOT00000086218	Sh3bp5l Links NCBI RGD Ensembl Show fit	SH3 binding domain protein 5 like
chr7_+_18668692 Show fit	0.04	ENSRNOT00000009532	Kank3 Links NCBI RGD Ensembl Show fit	KN motif and ankyrin repeat domains 3
chr7_-_124620703 Show fit	0.04	ENSRNOT00000017727	Scube1 Links NCBI RGD Ensembl Show fit	signal peptide, CUB domain and EGF like domain containing 1
chr8_+_63286773 Show fit	0.04	ENSRNOT00000033397	RGD1562618 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 6030419C18 gene
chr16_+_61954590 Show fit	0.04	ENSRNOT00000017883	Rbpms Links NCBI RGD Ensembl Show fit	RNA binding protein with multiple splicing
chr19_-_39087880 Show fit	0.04	ENSRNOT00000070822	Chtf8 Links NCBI RGD Ensembl Show fit	chromosome transmission fidelity factor 8
chr14_+_83341851 Show fit	0.04	ENSRNOT00000086090	Pisd Links NCBI RGD Ensembl Show fit	phosphatidylserine decarboxylase
chr10_+_75087892 Show fit	0.04	ENSRNOT00000065910	Mpo Links NCBI RGD Ensembl Show fit	myeloperoxidase
chr1_+_212558257 Show fit	0.04	ENSRNOT00000024912	Prap1 Links NCBI RGD Ensembl Show fit	proline-rich acidic protein 1
chr20_-_5140304 Show fit	0.04	ENSRNOT00000092646	Prrc2a Links NCBI RGD Ensembl Show fit	proline-rich coiled-coil 2A
chr2_-_210873024 Show fit	0.04	ENSRNOT00000026051	Ampd2 Links NCBI RGD Ensembl Show fit	adenosine monophosphate deaminase 2
chr8_+_56179816 Show fit	0.04	ENSRNOT00000059078	Arhgap20 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 20
chr5_+_167109691 Show fit	0.04	ENSRNOT00000055536	Gpr157 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 157
chr8_+_93491761 Show fit	0.04	ENSRNOT00000014326	Tpbg Links NCBI RGD Ensembl Show fit	trophoblast glycoprotein
chr9_-_52238564 Show fit	0.04	ENSRNOT00000005073	Col5a2 Links NCBI RGD Ensembl Show fit	collagen type V alpha 2 chain
chr3_-_147487170 Show fit	0.04	ENSRNOT00000077580	Fam110a Links NCBI RGD Ensembl Show fit	family with sequence similarity 110, member A
chr8_-_119157071 Show fit	0.04	ENSRNOT00000028963	Tmie Links NCBI RGD Ensembl Show fit	transmembrane inner ear
chr3_-_175479034 Show fit	0.04	ENSRNOT00000086761	Hrh3 Links NCBI RGD Ensembl Show fit	histamine receptor H3
chr1_-_216663720 Show fit	0.04	ENSRNOT00000078944 ENSRNOT00000077409	Cdkn1c Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase inhibitor 1C
chr8_+_45797315 Show fit	0.04	ENSRNOT00000059997	AABR07070046.1 Links NCBI RGD Ensembl Show fit
chr8_-_3272306 Show fit	0.04	ENSRNOT00000040365	AABR07068955.1 Links NCBI RGD Ensembl Show fit
chr20_-_6257604 Show fit	0.04	ENSRNOT00000092489	Stk38 Links NCBI RGD Ensembl Show fit	serine/threonine kinase 38

View svg image
View png image

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0034653	diterpenoid catabolic process(GO:0016103) retinoic acid catabolic process(GO:0034653)
0.1	0.2	GO:0002397	MHC class I protein complex assembly(GO:0002397)
0.0	0.1	GO:0021530	spinal cord oligodendrocyte cell differentiation(GO:0021529) spinal cord oligodendrocyte cell fate specification(GO:0021530)
0.0	0.1	GO:0035986	senescence-associated heterochromatin focus assembly(GO:0035986)
0.0	0.1	GO:0002149	hypochlorous acid metabolic process(GO:0002148) hypochlorous acid biosynthetic process(GO:0002149)
0.0	0.1	GO:0010909	regulation of heparan sulfate proteoglycan biosynthetic process(GO:0010908) positive regulation of heparan sulfate proteoglycan biosynthetic process(GO:0010909) embryonic hindgut morphogenesis(GO:0048619)
0.0	0.1	GO:0000738	DNA catabolic process, exonucleolytic(GO:0000738)
0.0	0.1	GO:0045065	cytotoxic T cell differentiation(GO:0045065)
0.0	0.1	GO:0070086	ubiquitin-dependent endocytosis(GO:0070086)
0.0	0.1	GO:0048162	preantral ovarian follicle growth(GO:0001546) multi-layer follicle stage(GO:0048162)
0.0	0.1	GO:1903300	negative regulation of glucokinase activity(GO:0033132) negative regulation of hexokinase activity(GO:1903300)
0.0	0.1	GO:2000424	regulation of eosinophil chemotaxis(GO:2000422) positive regulation of eosinophil chemotaxis(GO:2000424)
0.0	0.2	GO:0043435	response to corticotropin-releasing hormone(GO:0043435) cellular response to corticotropin-releasing hormone stimulus(GO:0071376)
0.0	0.1	GO:0035544	negative regulation of SNARE complex assembly(GO:0035544)
0.0	0.2	GO:0097116	gephyrin clustering involved in postsynaptic density assembly(GO:0097116)
0.0	0.1	GO:0003357	noradrenergic neuron differentiation(GO:0003357)
0.0	0.1	GO:0072144	glomerular mesangial cell development(GO:0072144)
0.0	0.1	GO:0043366	beta selection(GO:0043366)
0.0	0.1	GO:0043314	negative regulation of neutrophil degranulation(GO:0043314)
0.0	0.1	GO:1902303	negative regulation of potassium ion export(GO:1902303)
0.0	0.1	GO:1903575	cornified envelope assembly(GO:1903575)
0.0	0.1	GO:0097296	mineralocorticoid receptor signaling pathway(GO:0031959) interleukin-12-mediated signaling pathway(GO:0035722) positive regulation of growth hormone receptor signaling pathway(GO:0060399) cellular response to interleukin-12(GO:0071349) activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:0097296)
0.0	0.1	GO:0097167	circadian regulation of translation(GO:0097167)
0.0	0.1	GO:1903334	positive regulation of protein folding(GO:1903334)
0.0	0.1	GO:0071469	cellular response to alkaline pH(GO:0071469)
0.0	0.1	GO:2000328	regulation of T-helper 17 cell lineage commitment(GO:2000328)
0.0	0.1	GO:0098759	response to interleukin-8(GO:0098758) cellular response to interleukin-8(GO:0098759)
0.0	0.0	GO:0072054	renal outer medulla development(GO:0072054)
0.0	0.1	GO:0002317	plasma cell differentiation(GO:0002317)
0.0	0.1	GO:0010890	positive regulation of sequestering of triglyceride(GO:0010890)
0.0	0.0	GO:1905225	response to thyrotropin-releasing hormone(GO:1905225)
0.0	0.1	GO:0042420	dopamine catabolic process(GO:0042420)
0.0	0.1	GO:1902746	regulation of lens fiber cell differentiation(GO:1902746)
0.0	0.0	GO:0071461	cellular response to redox state(GO:0071461)
0.0	0.1	GO:2000669	negative regulation of dendritic cell apoptotic process(GO:2000669)
0.0	0.1	GO:0003340	negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis(GO:0003340)
0.0	0.0	GO:1902809	regulation of skeletal muscle fiber differentiation(GO:1902809)
0.0	0.1	GO:1901386	negative regulation of voltage-gated calcium channel activity(GO:1901386)
0.0	0.2	GO:0006527	arginine catabolic process(GO:0006527)
0.0	0.0	GO:1904721	negative regulation of mRNA cleavage(GO:0031438) negative regulation of mRNA endonucleolytic cleavage involved in unfolded protein response(GO:1904721)
0.0	0.0	GO:0010982	regulation of high-density lipoprotein particle clearance(GO:0010982) positive regulation of lipoprotein particle clearance(GO:0010986)
0.0	0.0	GO:0021564	vagus nerve development(GO:0021564)
0.0	0.0	GO:0019064	fusion of virus membrane with host plasma membrane(GO:0019064) membrane fusion involved in viral entry into host cell(GO:0039663) multi-organism membrane fusion(GO:0044800) susceptibility to T cell mediated cytotoxicity(GO:0060370)
0.0	0.0	GO:1903847	regulation of aorta morphogenesis(GO:1903847) positive regulation of aorta morphogenesis(GO:1903849)
0.0	0.2	GO:0002087	regulation of respiratory gaseous exchange by neurological system process(GO:0002087)
0.0	0.1	GO:0001661	conditioned taste aversion(GO:0001661)
0.0	0.0	GO:0031444	slow-twitch skeletal muscle fiber contraction(GO:0031444)
0.0	0.1	GO:0060158	phospholipase C-activating dopamine receptor signaling pathway(GO:0060158)
0.0	0.0	GO:0097104	postsynaptic membrane assembly(GO:0097104)
0.0	0.1	GO:2000852	regulation of corticosterone secretion(GO:2000852)
0.0	0.1	GO:0048664	neuron fate determination(GO:0048664)
0.0	0.2	GO:0022038	corpus callosum development(GO:0022038)
0.0	0.1	GO:0006477	protein sulfation(GO:0006477)
0.0	0.1	GO:0042989	sequestering of actin monomers(GO:0042989)
0.0	0.0	GO:0071579	regulation of zinc ion transport(GO:0071579)
0.0	0.1	GO:0034370	triglyceride-rich lipoprotein particle remodeling(GO:0034370) very-low-density lipoprotein particle remodeling(GO:0034372)
0.0	0.0	GO:0071929	alpha-tubulin acetylation(GO:0071929)
0.0	0.1	GO:0031274	positive regulation of pseudopodium assembly(GO:0031274)
0.0	0.1	GO:2000774	positive regulation of cellular senescence(GO:2000774)
0.0	0.0	GO:0060931	sinoatrial node cell development(GO:0060931)
0.0	0.0	GO:1903225	negative regulation of endodermal cell differentiation(GO:1903225)
0.0	0.1	GO:0006572	tyrosine catabolic process(GO:0006572)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:1990907	beta-catenin-TCF complex(GO:1990907)
0.0	0.1	GO:0042571	immunoglobulin complex, circulating(GO:0042571)
0.0	0.2	GO:0033018	sarcoplasmic reticulum lumen(GO:0033018)
0.0	0.2	GO:0033256	I-kappaB/NF-kappaB complex(GO:0033256)
0.0	0.1	GO:0035976	AP1 complex(GO:0035976)
0.0	0.1	GO:0000444	MIS12/MIND type complex(GO:0000444)
0.0	0.1	GO:0035985	senescence-associated heterochromatin focus(GO:0035985)
0.0	0.1	GO:0016600	flotillin complex(GO:0016600)
0.0	0.0	GO:0005853	eukaryotic translation elongation factor 1 complex(GO:0005853)
0.0	0.0	GO:0005588	collagen type V trimer(GO:0005588)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0016403	dimethylargininase activity(GO:0016403)
0.0	0.2	GO:0097109	neuroligin family protein binding(GO:0097109)
0.0	0.1	GO:0008401	retinoic acid 4-hydroxylase activity(GO:0008401)
0.0	0.1	GO:0004706	JUN kinase kinase kinase activity(GO:0004706)
0.0	0.1	GO:0005330	dopamine:sodium symporter activity(GO:0005330)
0.0	0.1	GO:0051575	5'-deoxyribose-5-phosphate lyase activity(GO:0051575)
0.0	0.1	GO:0008310	single-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008310)
0.0	0.1	GO:0001641	group II metabotropic glutamate receptor activity(GO:0001641)
0.0	0.1	GO:0097603	temperature-gated ion channel activity(GO:0097603)
0.0	0.1	GO:0034186	apolipoprotein A-I binding(GO:0034186)
0.0	0.1	GO:0004918	interleukin-8 receptor activity(GO:0004918)
0.0	0.2	GO:0035256	G-protein coupled glutamate receptor binding(GO:0035256)
0.0	0.1	GO:0052629	phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0	0.1	GO:0046920	alpha-(1->3)-fucosyltransferase activity(GO:0046920)
0.0	0.1	GO:0005143	interleukin-12 receptor binding(GO:0005143)
0.0	0.1	GO:0070996	type 1 melanocortin receptor binding(GO:0070996)
0.0	0.1	GO:1902282	voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization(GO:1902282)
0.0	0.0	GO:0016508	long-chain-enoyl-CoA hydratase activity(GO:0016508) long-chain-3-hydroxyacyl-CoA dehydrogenase activity(GO:0016509)
0.0	0.1	GO:0005219	ryanodine-sensitive calcium-release channel activity(GO:0005219)
0.0	0.2	GO:0001972	retinoic acid binding(GO:0001972)
0.0	0.1	GO:0003836	beta-galactoside (CMP) alpha-2,3-sialyltransferase activity(GO:0003836)
0.0	0.1	GO:0051032	nucleic acid transmembrane transporter activity(GO:0051032) RNA transmembrane transporter activity(GO:0051033)
0.0	0.1	GO:0008467	[heparan sulfate]-glucosamine 3-sulfotransferase 1 activity(GO:0008467)
0.0	0.1	GO:0016286	small conductance calcium-activated potassium channel activity(GO:0016286)
0.0	0.1	GO:0070016	armadillo repeat domain binding(GO:0070016)
0.0	0.0	GO:1902379	chemoattractant activity involved in axon guidance(GO:1902379)
0.0	0.1	GO:0004720	protein-lysine 6-oxidase activity(GO:0004720)
0.0	0.0	GO:0035614	snRNA stem-loop binding(GO:0035614)
0.0	0.0	GO:0004609	phosphatidylserine decarboxylase activity(GO:0004609)
0.0	0.0	GO:0003876	AMP deaminase activity(GO:0003876) adenosine-phosphate deaminase activity(GO:0047623)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	REACTOME APOBEC3G MEDIATED RESISTANCE TO HIV1 INFECTION	Genes involved in APOBEC3G mediated resistance to HIV-1 infection
0.0	0.2	REACTOME N GLYCAN TRIMMING IN THE ER AND CALNEXIN CALRETICULIN CYCLE	Genes involved in N-glycan trimming in the ER and Calnexin/Calreticulin cycle
0.0	0.2	REACTOME ADENYLATE CYCLASE ACTIVATING PATHWAY	Genes involved in Adenylate cyclase activating pathway
0.0	0.1	REACTOME PEPTIDE HORMONE BIOSYNTHESIS	Genes involved in Peptide hormone biosynthesis