GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Pbx1 Links NCBI RGD Ensembl	ENSRNOG00000004693	PBX homeobox 1
Pbx3 Links NCBI RGD Ensembl	ENSRNOG00000022162	PBX homeobox 3

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Pbx1	rn6_v1_chr13_-_86451002_86451002	-0.59	3.0e-01	Click!
Pbx3	rn6_v1_chr3_-_13525983_13525983	-0.13	8.4e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr19_+_55669626 Show fit	1.36	ENSRNOT00000033352	Cdh15 Links NCBI RGD Ensembl Show fit	cadherin 15
chr10_+_91830654 Show fit	0.41	ENSRNOT00000005176	Wnt3 Links NCBI RGD Ensembl Show fit	wingless-type MMTV integration site family, member 3
chr1_+_214454090 Show fit	0.33	ENSRNOT00000049448	Tspan4 Links NCBI RGD Ensembl Show fit	tetraspanin 4
chr1_+_99762253 Show fit	0.28	ENSRNOT00000065876	Klk6 Links NCBI RGD Ensembl Show fit	kallikrein related-peptidase 6
chrX_+_107496072 Show fit	0.27	ENSRNOT00000003283	Plp1 Links NCBI RGD Ensembl Show fit	proteolipid protein 1
chr1_+_33910912 Show fit	0.25	ENSRNOT00000044690	Irx1 Links NCBI RGD Ensembl Show fit	iroquois homeobox 1
chr3_+_111135021 Show fit	0.19	ENSRNOT00000018970	Dll4 Links NCBI RGD Ensembl Show fit	delta like canonical Notch ligand 4
chr6_+_55812747 Show fit	0.19	ENSRNOT00000008106	Sostdc1 Links NCBI RGD Ensembl Show fit	sclerostin domain containing 1
chr8_-_23000455 Show fit	0.18	ENSRNOT00000091027 ENSRNOT00000017493	Rgl3 Links NCBI RGD Ensembl Show fit	ral guanine nucleotide dissociation stimulator-like 3
chr6_+_8886591 Show fit	0.17	ENSRNOT00000091510 ENSRNOT00000089174	Six3 Links NCBI RGD Ensembl Show fit	SIX homeobox 3
chr1_-_33275540 Show fit	0.15	ENSRNOT00000017019	Irx2 Links NCBI RGD Ensembl Show fit	iroquois homeobox 2
chr7_+_11737293 Show fit	0.15	ENSRNOT00000046059	Lingo3 Links NCBI RGD Ensembl Show fit	leucine rich repeat and Ig domain containing 3
chr18_+_79326738 Show fit	0.14	ENSRNOT00000089879	Mbp Links NCBI RGD Ensembl Show fit	myelin basic protein
chr14_-_103321270 Show fit	0.14	ENSRNOT00000006157	Meis1 Links NCBI RGD Ensembl Show fit	Meis homeobox 1
chr12_+_52670898 Show fit	0.14	ENSRNOT00000056632	LOC100912590 Links NCBI RGD Ensembl Show fit	putative GTP-binding protein 6-like
chr6_-_99783047 Show fit	0.14	ENSRNOT00000009028	Sptb Links NCBI RGD Ensembl Show fit	spectrin, beta, erythrocytic
chr10_+_88245532 Show fit	0.14	ENSRNOT00000019863	Gast Links NCBI RGD Ensembl Show fit	gastrin
chr12_+_52637000 Show fit	0.13	ENSRNOT00000063905	Gtpbp6 Links NCBI RGD Ensembl Show fit	GTP binding protein 6 (putative)
chr19_+_37873515 Show fit	0.13	ENSRNOT00000026163 ENSRNOT00000089921	Pskh1 Links NCBI RGD Ensembl Show fit	protein serine kinase H1
chr19_-_52282877 Show fit	0.12	ENSRNOT00000021271	Kcng4 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel modifier subfamily G member 4
chr7_-_120967490 Show fit	0.11	ENSRNOT00000046399	Sun2 Links NCBI RGD Ensembl Show fit	Sad1 and UNC84 domain containing 2
chr9_-_78969013 Show fit	0.11	ENSRNOT00000019772 ENSRNOT00000057585	Fn1 Links NCBI RGD Ensembl Show fit	fibronectin 1
chr6_+_58468155 Show fit	0.10	ENSRNOT00000091263	Etv1 Links NCBI RGD Ensembl Show fit	ets variant 1
chr1_+_261229347 Show fit	0.10	ENSRNOT00000018485	Ubtd1 Links NCBI RGD Ensembl Show fit	ubiquitin domain containing 1
chr15_-_108898703 Show fit	0.10	ENSRNOT00000067577	Zic5 Links NCBI RGD Ensembl Show fit	Zic family member 5
chr3_+_11593655 Show fit	0.10	ENSRNOT00000074122	Pip5kl1 Links NCBI RGD Ensembl Show fit	phosphatidylinositol-4-phosphate 5-kinase-like 1
chr12_+_18516946 Show fit	0.09	ENSRNOT00000029485	Dhrsx Links NCBI RGD Ensembl Show fit	dehydrogenase/reductase X-linked
chr10_-_103816287 Show fit	0.09	ENSRNOT00000004477	Grin2c Links NCBI RGD Ensembl Show fit	glutamate ionotropic receptor NMDA type subunit 2C
chr3_+_171832500 Show fit	0.09	ENSRNOT00000007554	Vapb Links NCBI RGD Ensembl Show fit	VAMP associated protein B and C
chr1_+_29432152 Show fit	0.09	ENSRNOT00000019436 ENSRNOT00000083276	Trmt11 Links NCBI RGD Ensembl Show fit	tRNA methyltransferase 11 homolog
chr10_-_47724499 Show fit	0.08	ENSRNOT00000085011	Rnf112 Links NCBI RGD Ensembl Show fit	ring finger protein 112
chr10_+_15696824 Show fit	0.08	ENSRNOT00000079290	Il9r Links NCBI RGD Ensembl Show fit	interleukin 9 receptor
chr6_+_109710781 Show fit	0.08	ENSRNOT00000012895	Ttll5 Links NCBI RGD Ensembl Show fit	tubulin tyrosine ligase like 5
chr20_+_11393877 Show fit	0.08	ENSRNOT00000001625	Pfkl Links NCBI RGD Ensembl Show fit	phosphofructokinase, liver type
chr2_+_95320283 Show fit	0.08	ENSRNOT00000015537	Hey1 Links NCBI RGD Ensembl Show fit	hes-related family bHLH transcription factor with YRPW motif 1
chr5_-_59025631 Show fit	0.08	ENSRNOT00000049000 ENSRNOT00000022801	Tpm2 Links NCBI RGD Ensembl Show fit	tropomyosin 2, beta
chr4_+_153921115 Show fit	0.08	ENSRNOT00000018821	Slc6a12 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 12
chr12_-_13251112 Show fit	0.07	ENSRNOT00000044378	Grid2ip Links NCBI RGD Ensembl Show fit	Grid2 interacting protein
chr17_+_76002275 Show fit	0.07	ENSRNOT00000092665 ENSRNOT00000086701	Echdc3 Links NCBI RGD Ensembl Show fit	enoyl CoA hydratase domain containing 3
chr5_-_169017295 Show fit	0.07	ENSRNOT00000067481	Camta1 Links NCBI RGD Ensembl Show fit	calmodulin binding transcription activator 1
chr1_+_218076116 Show fit	0.07	ENSRNOT00000028374	Oraov1 Links NCBI RGD Ensembl Show fit	oral cancer overexpressed 1
chr3_+_148234193 Show fit	0.07	ENSRNOT00000010418	Cox4i2 Links NCBI RGD Ensembl Show fit	cytochrome c oxidase subunit 4i2
chr5_-_166926636 Show fit	0.06	ENSRNOT00000023287	Spsb1 Links NCBI RGD Ensembl Show fit	splA/ryanodine receptor domain and SOCS box containing 1
chr17_-_66511870 Show fit	0.06	ENSRNOT00000044662	Lgals8 Links NCBI RGD Ensembl Show fit	galectin 8
chr11_+_47188495 Show fit	0.06	ENSRNOT00000002188	Nxpe3 Links NCBI RGD Ensembl Show fit	neurexophilin and PC-esterase domain family, member 3
chr13_-_98530724 Show fit	0.06	ENSRNOT00000040203	Psen2 Links NCBI RGD Ensembl Show fit	presenilin 2
chr4_-_7113919 Show fit	0.06	ENSRNOT00000014082	Chpf2 Links NCBI RGD Ensembl Show fit	chondroitin polymerizing factor 2
chr1_+_264893162 Show fit	0.06	ENSRNOT00000021714	Tlx1 Links NCBI RGD Ensembl Show fit	T-cell leukemia, homeobox 1
chr11_-_60547201 Show fit	0.06	ENSRNOT00000093151	Btla Links NCBI RGD Ensembl Show fit	B and T lymphocyte associated
chr14_+_63095720 Show fit	0.06	ENSRNOT00000006071	Ppargc1a Links NCBI RGD Ensembl Show fit	PPARG coactivator 1 alpha
chr9_+_46840992 Show fit	0.06	ENSRNOT00000019415	Il1r2 Links NCBI RGD Ensembl Show fit	interleukin 1 receptor type 2
chr2_+_46980976 Show fit	0.06	ENSRNOT00000083668 ENSRNOT00000082990	Mocs2 Links NCBI RGD Ensembl Show fit	molybdenum cofactor synthesis 2
chr2_+_196334626 Show fit	0.05	ENSRNOT00000050914 ENSRNOT00000028645 ENSRNOT00000090729	Sema6c Links NCBI RGD Ensembl Show fit	semaphorin 6C
chr1_+_240908483 Show fit	0.05	ENSRNOT00000019367	Klf9 Links NCBI RGD Ensembl Show fit	Kruppel-like factor 9
chr8_+_132032944 Show fit	0.05	ENSRNOT00000089278	Kif15 Links NCBI RGD Ensembl Show fit	kinesin family member 15
chr4_-_56453563 Show fit	0.05	ENSRNOT00000060362	Prrt4 Links NCBI RGD Ensembl Show fit	proline-rich transmembrane protein 4
chr3_+_170252901 Show fit	0.05	ENSRNOT00000005871	Mc3r Links NCBI RGD Ensembl Show fit	melanocortin 3 receptor
chr8_+_94686938 Show fit	0.05	ENSRNOT00000013285	Ripply2 Links NCBI RGD Ensembl Show fit	ripply transcriptional repressor 2
chr2_+_78407414 Show fit	0.05	ENSRNOT00000084541 ENSRNOT00000087109	Zfp622 Links NCBI RGD Ensembl Show fit	zinc finger protein 622
chr1_+_248402980 Show fit	0.05	ENSRNOT00000043517	Chchd4 Links NCBI RGD Ensembl Show fit	coiled-coil-helix-coiled-coil-helix domain containing 4
chr10_+_86303727 Show fit	0.05	ENSRNOT00000037752	Ppp1r1b Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory (inhibitor) subunit 1B
chr20_+_27173213 Show fit	0.05	ENSRNOT00000073617	Hnrnph3 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein H3
chr1_-_56683731 Show fit	0.05	ENSRNOT00000014552	Thbs2 Links NCBI RGD Ensembl Show fit	thrombospondin 2
chr5_+_148320438 Show fit	0.05	ENSRNOT00000018742	Pef1 Links NCBI RGD Ensembl Show fit	penta-EF hand domain containing 1
chr1_+_222844144 Show fit	0.04	ENSRNOT00000032879	Pla2g16 Links NCBI RGD Ensembl Show fit	phospholipase A2, group XVI
chr20_+_8312792 Show fit	0.04	ENSRNOT00000083108	Cmtr1 Links NCBI RGD Ensembl Show fit	cap methyltransferase 1
chr5_+_147375350 Show fit	0.04	ENSRNOT00000010674	Yars Links NCBI RGD Ensembl Show fit	tyrosyl-tRNA synthetase
chr7_-_144778656 Show fit	0.04	ENSRNOT00000055290	Smug1 Links NCBI RGD Ensembl Show fit	single-strand-selective monofunctional uracil-DNA glycosylase 1
chr1_+_101055622 Show fit	0.04	ENSRNOT00000079189	Nosip Links NCBI RGD Ensembl Show fit	nitric oxide synthase interacting protein
chr4_+_168689163 Show fit	0.04	ENSRNOT00000049848	Cdkn1b Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase inhibitor 1B
chr2_+_174542667 Show fit	0.04	ENSRNOT00000076793	Fstl5 Links NCBI RGD Ensembl Show fit	follistatin-like 5
chr3_+_9822580 Show fit	0.04	ENSRNOT00000010786 ENSRNOT00000093718	Usp20 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 20
chr7_-_142050558 Show fit	0.04	ENSRNOT00000081327 ENSRNOT00000086751	Slc11a2 Links NCBI RGD Ensembl Show fit	solute carrier family 11 member 2
chr3_-_105512939 Show fit	0.04	ENSRNOT00000011773	Actc1 Links NCBI RGD Ensembl Show fit	actin, alpha, cardiac muscle 1
chr8_+_104106740 Show fit	0.04	ENSRNOT00000015015	Tfdp2 Links NCBI RGD Ensembl Show fit	transcription factor Dp-2
chr3_+_5709236 Show fit	0.04	ENSRNOT00000061201 ENSRNOT00000070887	Dbh Links NCBI RGD Ensembl Show fit	dopamine beta-hydroxylase
chr20_-_12870496 Show fit	0.04	ENSRNOT00000078412 ENSRNOT00000081903	Lss Links NCBI RGD Ensembl Show fit	lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)
chrX_-_64702441 Show fit	0.04	ENSRNOT00000051132	Amer1 Links NCBI RGD Ensembl Show fit	APC membrane recruitment protein 1
chr4_+_57034675 Show fit	0.04	ENSRNOT00000080223	Smo Links NCBI RGD Ensembl Show fit	smoothened, frizzled class receptor
chrX_+_156854594 Show fit	0.04	ENSRNOT00000083442	Renbp Links NCBI RGD Ensembl Show fit	renin binding protein
chr7_+_123578878 Show fit	0.04	ENSRNOT00000011316	Smdt1 Links NCBI RGD Ensembl Show fit	single-pass membrane protein with aspartate-rich tail 1
chr18_-_6782757 Show fit	0.04	ENSRNOT00000068150	Aqp4 Links NCBI RGD Ensembl Show fit	aquaporin 4
chr20_+_29558689 Show fit	0.04	ENSRNOT00000085229	Ascc1 Links NCBI RGD Ensembl Show fit	activating signal cointegrator 1 complex subunit 1
chr1_-_211956858 Show fit	0.04	ENSRNOT00000054886	Cfap46 Links NCBI RGD Ensembl Show fit	cilia and flagella associated protein 46
chr1_+_78933372 Show fit	0.04	ENSRNOT00000029810	Ccdc8 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 8
chr8_-_22785671 Show fit	0.04	ENSRNOT00000045384	Spc24 Links NCBI RGD Ensembl Show fit	SPC24, NDC80 kinetochore complex component
chr8_+_48569328 Show fit	0.04	ENSRNOT00000084030	Ccdc153 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 153
chr19_+_37229120 Show fit	0.04	ENSRNOT00000076335	Hsf4 Links NCBI RGD Ensembl Show fit	heat shock transcription factor 4
chr1_-_91042230 Show fit	0.04	ENSRNOT00000073107	LOC103690054 Links NCBI RGD Ensembl Show fit	DNA-directed RNA polymerase II subunit RPB9
chr2_-_210738378 Show fit	0.04	ENSRNOT00000025746	Gstm6 Links NCBI RGD Ensembl Show fit	glutathione S-transferase, mu 6
chr18_-_6782996 Show fit	0.04	ENSRNOT00000090320	Aqp4 Links NCBI RGD Ensembl Show fit	aquaporin 4
chr10_-_14324170 Show fit	0.04	ENSRNOT00000035513 ENSRNOT00000090587	Hn1l Links NCBI RGD Ensembl Show fit	hematological and neurological expressed 1-like
chr19_-_43215077 Show fit	0.04	ENSRNOT00000082151	Aars Links NCBI RGD Ensembl Show fit	alanyl-tRNA synthetase
chr8_-_48802204 Show fit	0.04	ENSRNOT00000077364	AC105645.4 Links NCBI RGD Ensembl Show fit
chr5_-_77031120 Show fit	0.03	ENSRNOT00000022987	Inip Links NCBI RGD Ensembl Show fit	INTS3 and NABP interacting protein
chr19_-_43215281 Show fit	0.03	ENSRNOT00000025052	Aars Links NCBI RGD Ensembl Show fit	alanyl-tRNA synthetase
chr1_+_57345577 Show fit	0.03	ENSRNOT00000082790 ENSRNOT00000084017	Fam120b Links NCBI RGD Ensembl Show fit	family with sequence similarity 120B
chr6_+_8219385 Show fit	0.03	ENSRNOT00000040509	Ppm1b Links NCBI RGD Ensembl Show fit	protein phosphatase, Mg2+/Mn2+ dependent, 1B
chr7_-_9834670 Show fit	0.03	ENSRNOT00000075919 ENSRNOT00000076994	LOC102549817 Links NCBI RGD Ensembl Show fit	zinc finger protein 124-like
chrX_+_105911925 Show fit	0.03	ENSRNOT00000052422	LOC108348137 Links NCBI RGD Ensembl Show fit	armadillo repeat-containing X-linked protein 1
chr5_+_33580944 Show fit	0.03	ENSRNOT00000092054 ENSRNOT00000036050	Rmdn1 Links NCBI RGD Ensembl Show fit	regulator of microtubule dynamics 1
chr10_-_47018537 Show fit	0.03	ENSRNOT00000068351 ENSRNOT00000080083	Top3a Links NCBI RGD Ensembl Show fit	topoisomerase (DNA) III alpha
chrX_-_64715823 Show fit	0.03	ENSRNOT00000076297	Asb12 Links NCBI RGD Ensembl Show fit	ankyrin repeat and SOCS box-containing 12
chr7_-_25743537 Show fit	0.03	ENSRNOT00000083450	LOC100910996 Links NCBI RGD Ensembl Show fit	uncharacterized LOC100910996
chr2_+_187951344 Show fit	0.03	ENSRNOT00000027123	Ssr2 Links NCBI RGD Ensembl Show fit	signal sequence receptor, beta
chr7_+_142239035 Show fit	0.03	ENSRNOT00000006239	Dazap2 Links NCBI RGD Ensembl Show fit	DAZ associated protein 2
chr4_+_181027212 Show fit	0.03	ENSRNOT00000002502	Stk38l Links NCBI RGD Ensembl Show fit	serine/threonine kinase 38 like
chr6_-_33691301 Show fit	0.03	ENSRNOT00000008008	Rhob Links NCBI RGD Ensembl Show fit	ras homolog family member B
chr8_-_33017854 Show fit	0.03	ENSRNOT00000011386	Barx2 Links NCBI RGD Ensembl Show fit	BARX homeobox 2
chr10_-_104637823 Show fit	0.03	ENSRNOT00000010826	Wbp2 Links NCBI RGD Ensembl Show fit	WW domain binding protein 2
chr2_+_122877286 Show fit	0.03	ENSRNOT00000033080	Arse Links NCBI RGD Ensembl Show fit	arylsulfatase E
chr8_+_131845696 Show fit	0.03	ENSRNOT00000005440	Tcaim Links NCBI RGD Ensembl Show fit	T cell activation inhibitor, mitochondrial
chr2_-_143104412 Show fit	0.03	ENSRNOT00000058116	Ufm1 Links NCBI RGD Ensembl Show fit	ubiquitin-fold modifier 1
chr4_+_170766900 Show fit	0.03	ENSRNOT00000044446	H2afj Links NCBI RGD Ensembl Show fit	H2A histone family, member J
chr7_-_59587382 Show fit	0.03	ENSRNOT00000091427 ENSRNOT00000066396	Cnot2 Links NCBI RGD Ensembl Show fit	CCR4-NOT transcription complex, subunit 2
chr11_+_89511191 Show fit	0.03	ENSRNOT00000002510	Mcm4 Links NCBI RGD Ensembl Show fit	minichromosome maintenance complex component 4
chr20_+_18493538 Show fit	0.03	ENSRNOT00000000749	Cisd1 Links NCBI RGD Ensembl Show fit	CDGSH iron sulfur domain 1
chr9_+_10885560 Show fit	0.03	ENSRNOT00000072870	Mydgf Links NCBI RGD Ensembl Show fit	myeloid-derived growth factor
chr14_-_86047162 Show fit	0.03	ENSRNOT00000018227	Pgam2 Links NCBI RGD Ensembl Show fit	phosphoglycerate mutase 2
chr1_-_79816450 Show fit	0.03	ENSRNOT00000018495	Ccdc61 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 61
chr5_+_162808646 Show fit	0.03	ENSRNOT00000021155	Dhrs3 Links NCBI RGD Ensembl Show fit	dehydrogenase/reductase 3
chr7_+_80750725 Show fit	0.03	ENSRNOT00000079962	Oxr1 Links NCBI RGD Ensembl Show fit	oxidation resistance 1
chr3_-_172566010 Show fit	0.03	ENSRNOT00000071913	Atp5e Links NCBI RGD Ensembl Show fit	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
chr15_+_33108671 Show fit	0.02	ENSRNOT00000015468	Lrp10 Links NCBI RGD Ensembl Show fit	LDL receptor related protein 10
chr4_-_156427755 Show fit	0.02	ENSRNOT00000085675 ENSRNOT00000014030	LOC103690024 Links NCBI RGD Ensembl Show fit	peroxisomal targeting signal 1 receptor-like
chr10_-_10908776 Show fit	0.02	ENSRNOT00000065907	AABR07072078.1 Links NCBI RGD Ensembl Show fit
chr1_-_134871167 Show fit	0.02	ENSRNOT00000076300	Chd2 Links NCBI RGD Ensembl Show fit	chromodomain helicase DNA binding protein 2
chr14_+_42401706 Show fit	0.02	ENSRNOT00000090148	Bend4 Links NCBI RGD Ensembl Show fit	BEN domain containing 4
chr1_+_101427195 Show fit	0.02	ENSRNOT00000028271	Gys1 Links NCBI RGD Ensembl Show fit	glycogen synthase 1
chr4_+_61912210 Show fit	0.02	ENSRNOT00000013569	Bpgm Links NCBI RGD Ensembl Show fit	bisphosphoglycerate mutase
chr10_-_88355678 Show fit	0.02	ENSRNOT00000076625	Nt5c3b Links NCBI RGD Ensembl Show fit	5'-nucleotidase, cytosolic IIIB
chr6_-_109103999 Show fit	0.02	ENSRNOT00000009086 ENSRNOT00000080009	Acyp1 Links NCBI RGD Ensembl Show fit	acylphosphatase 1
chr16_+_1979191 Show fit	0.02	ENSRNOT00000014382	Ppif Links NCBI RGD Ensembl Show fit	peptidylprolyl isomerase F
chrX_-_106558366 Show fit	0.02	ENSRNOT00000042126	Bex2 Links NCBI RGD Ensembl Show fit	brain expressed X-linked 2
chr8_-_13420439 Show fit	0.02	ENSRNOT00000051471	Izumo1r Links NCBI RGD Ensembl Show fit	IZUMO1 receptor, JUNO
chr17_+_36451058 Show fit	0.02	ENSRNOT00000071408	Cdkal1 Links NCBI RGD Ensembl Show fit	CDK5 regulatory subunit associated protein 1-like 1
chr7_-_144778339 Show fit	0.02	ENSRNOT00000082149	Smug1 Links NCBI RGD Ensembl Show fit	single-strand-selective monofunctional uracil-DNA glycosylase 1
chr3_+_11763706 Show fit	0.02	ENSRNOT00000078366	Sh2d3c Links NCBI RGD Ensembl Show fit	SH2 domain containing 3C
chr4_+_171748273 Show fit	0.02	ENSRNOT00000009998	Dera Links NCBI RGD Ensembl Show fit	deoxyribose-phosphate aldolase
chr15_-_46681467 Show fit	0.02	ENSRNOT00000015353	Tdh Links NCBI RGD Ensembl Show fit	L-threonine dehydrogenase
chrX_-_123486814 Show fit	0.02	ENSRNOT00000016993	RGD1564541 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein FLJ22965
chr10_+_73333119 Show fit	0.02	ENSRNOT00000004736	Tbx4 Links NCBI RGD Ensembl Show fit	T-box 4
chr1_-_229639187 Show fit	0.02	ENSRNOT00000016804	Zfp91 Links NCBI RGD Ensembl Show fit	zinc finger protein 91
chr10_+_89635675 Show fit	0.02	ENSRNOT00000028179	RGD1561590 Links NCBI RGD Ensembl Show fit	similar to SAP18
chr7_+_70580198 Show fit	0.02	ENSRNOT00000083472 ENSRNOT00000008941	Ddit3 Links NCBI RGD Ensembl Show fit	DNA-damage inducible transcript 3
chr10_-_20658100 Show fit	0.02	ENSRNOT00000010252	Rars Links NCBI RGD Ensembl Show fit	arginyl-tRNA synthetase
chr20_+_9948908 Show fit	0.02	ENSRNOT00000001541	Ubash3a Links NCBI RGD Ensembl Show fit	ubiquitin associated and SH3 domain containing, A
chr4_-_145370992 Show fit	0.02	ENSRNOT00000068001	Rpusd3 Links NCBI RGD Ensembl Show fit	RNA pseudouridylate synthase domain containing 3
chr4_-_157008947 Show fit	0.02	ENSRNOT00000073341	Pex5 Links NCBI RGD Ensembl Show fit	peroxisomal biogenesis factor 5
chr9_-_82699551 Show fit	0.02	ENSRNOT00000020673	Obsl1 Links NCBI RGD Ensembl Show fit	obscurin-like 1
chr17_-_20364714 Show fit	0.02	ENSRNOT00000070962	Jarid2 Links NCBI RGD Ensembl Show fit	jumonji and AT-rich interaction domain containing 2
chr5_+_165724027 Show fit	0.02	ENSRNOT00000018000	Casz1 Links NCBI RGD Ensembl Show fit	castor zinc finger 1
chr3_+_151126591 Show fit	0.02	ENSRNOT00000025859	Myh7b Links NCBI RGD Ensembl Show fit	myosin heavy chain 7B
chr1_+_282638017 Show fit	0.02	ENSRNOT00000079722 ENSRNOT00000082254	Ces2c Links NCBI RGD Ensembl Show fit	carboxylesterase 2C
chr4_-_138885556 Show fit	0.02	ENSRNOT00000008873	Crbn Links NCBI RGD Ensembl Show fit	cereblon
chr10_-_34961608 Show fit	0.02	ENSRNOT00000033056	LOC103689931 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein A/B
chr2_-_174413236 Show fit	0.02	ENSRNOT00000064588	Golim4 Links NCBI RGD Ensembl Show fit	golgi integral membrane protein 4
chr4_+_9966891 Show fit	0.02	ENSRNOT00000086609	Napepld Links NCBI RGD Ensembl Show fit	N-acyl phosphatidylethanolamine phospholipase D
chr17_-_77093308 Show fit	0.02	ENSRNOT00000024110	Ccdc3 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 3
chr17_-_75886523 Show fit	0.01	ENSRNOT00000046266	Usp6nl Links NCBI RGD Ensembl Show fit	USP6 N-terminal like
chr11_+_73078982 Show fit	0.01	ENSRNOT00000029549	Acap2 Links NCBI RGD Ensembl Show fit	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
chr14_+_83341851 Show fit	0.01	ENSRNOT00000086090	Pisd Links NCBI RGD Ensembl Show fit	phosphatidylserine decarboxylase
chr5_-_136748980 Show fit	0.01	ENSRNOT00000026844	Ipo13 Links NCBI RGD Ensembl Show fit	importin 13
chr7_-_124982566 Show fit	0.01	ENSRNOT00000075099	Sult4a1 Links NCBI RGD Ensembl Show fit	sulfotransferase family 4A, member 1
chr10_+_47018974 Show fit	0.01	ENSRNOT00000079375	Smcr8 Links NCBI RGD Ensembl Show fit	Smith-Magenis syndrome chromosome region, candidate 8
chrX_+_110016995 Show fit	0.01	ENSRNOT00000093542	Nrk Links NCBI RGD Ensembl Show fit	Nik related kinase
chr20_+_27212724 Show fit	0.01	ENSRNOT00000032600	Hnrnph3 Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein H3
chr18_+_86307646 Show fit	0.01	ENSRNOT00000091778	Cd226 Links NCBI RGD Ensembl Show fit	CD226 molecule
chr6_-_51257625 Show fit	0.01	ENSRNOT00000012004	Hbp1 Links NCBI RGD Ensembl Show fit	HMG-box transcription factor 1
chr20_-_3728844 Show fit	0.01	ENSRNOT00000074958	Psors1c2 Links NCBI RGD Ensembl Show fit	psoriasis susceptibility 1 candidate 2
chr14_-_7863664 Show fit	0.01	ENSRNOT00000061162	Ptpn13 Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, non-receptor type 13
chr4_+_98648545 Show fit	0.01	ENSRNOT00000008451	Eif2ak3 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 2 alpha kinase 3
chrX_+_106823491 Show fit	0.01	ENSRNOT00000045997	Bex3 Links NCBI RGD Ensembl Show fit	brain expressed X-linked 3
chr11_-_14741563 Show fit	0.01	ENSRNOT00000002152	Nrip1 Links NCBI RGD Ensembl Show fit	nuclear receptor interacting protein 1
chr3_+_45277348 Show fit	0.01	ENSRNOT00000059246	Pkp4 Links NCBI RGD Ensembl Show fit	plakophilin 4
chr8_-_132032971 Show fit	0.01	ENSRNOT00000005502	RGD1311745 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 1110059G10
chrX_-_64726210 Show fit	0.01	ENSRNOT00000076012 ENSRNOT00000086265	Asb12 Links NCBI RGD Ensembl Show fit	ankyrin repeat and SOCS box-containing 12
chr2_+_78262839 Show fit	0.01	ENSRNOT00000066879	LOC103689968 Links NCBI RGD Ensembl Show fit	protein FAM134B
chr15_-_28314459 Show fit	0.01	ENSRNOT00000042055 ENSRNOT00000040540	Ndrg2 Links NCBI RGD Ensembl Show fit	NDRG family member 2
chr15_-_28313841 Show fit	0.01	ENSRNOT00000085897	Ndrg2 Links NCBI RGD Ensembl Show fit	NDRG family member 2
chr20_-_2083688 Show fit	0.01	ENSRNOT00000001011	Znrd1as1 Links NCBI RGD Ensembl Show fit	ZNRD1 antisense RNA 1
chr3_-_120076788 Show fit	0.01	ENSRNOT00000047158	Kcnip3 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel interacting protein 3
chr1_-_101426852 Show fit	0.01	ENSRNOT00000028217	Ruvbl2 Links NCBI RGD Ensembl Show fit	RuvB-like AAA ATPase 2
chr2_-_186480278 Show fit	0.01	ENSRNOT00000031743	Kirrel Links NCBI RGD Ensembl Show fit	kin of IRRE like (Drosophila)
chr1_-_256914260 Show fit	0.01	ENSRNOT00000020620	Fra10ac1 Links NCBI RGD Ensembl Show fit	FRA10A associated CGG repeat 1
chr5_-_146973932 Show fit	0.01	ENSRNOT00000007761	Zfp362 Links NCBI RGD Ensembl Show fit	zinc finger protein 362
chr6_-_108488330 Show fit	0.01	ENSRNOT00000016076	Npc2 Links NCBI RGD Ensembl Show fit	NPC intracellular cholesterol transporter 2
chr1_-_88123643 Show fit	0.01	ENSRNOT00000027937	Psmd8 Links NCBI RGD Ensembl Show fit	proteasome 26S subunit, non-ATPase 8
chr3_+_160207913 Show fit	0.01	ENSRNOT00000014346	Wisp2 Links NCBI RGD Ensembl Show fit	WNT1 inducible signaling pathway protein 2
chr19_-_20508711 Show fit	0.01	ENSRNOT00000032408	LOC680913 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC680913
chrX_+_71324365 Show fit	0.01	ENSRNOT00000004911	Nono Links NCBI RGD Ensembl Show fit	non-POU domain containing, octamer-binding
chr19_+_27404712 Show fit	0.01	ENSRNOT00000023657	Mylk3 Links NCBI RGD Ensembl Show fit	myosin light chain kinase 3
chr3_-_176282211 Show fit	0.01	ENSRNOT00000013690	Bhlhe23 Links NCBI RGD Ensembl Show fit	basic helix-loop-helix family, member e23
chr11_-_71419223 Show fit	0.01	ENSRNOT00000002407	Tfrc Links NCBI RGD Ensembl Show fit	transferrin receptor
chr7_+_131330913 Show fit	0.01	ENSRNOT00000019672	Alg10 Links NCBI RGD Ensembl Show fit	ALG10, alpha-1,2-glucosyltransferase
chr20_-_11424324 Show fit	0.01	ENSRNOT00000049745	RGD1309594 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 1810043G02; DNA segment, Chr 10, Johns Hopkins University 13, expressed
chr1_+_142951094 Show fit	0.01	ENSRNOT00000077441	Slc28a1 Links NCBI RGD Ensembl Show fit	solute carrier family 28 member 1
chr4_-_150520774 Show fit	0.01	ENSRNOT00000009095	Zfp9 Links NCBI RGD Ensembl Show fit	zinc finger protein 9
chr9_-_19476646 Show fit	0.01	ENSRNOT00000013703	Enpp5 Links NCBI RGD Ensembl Show fit	ectonucleotide pyrophosphatase/phosphodiesterase 5
chr5_+_2632712 Show fit	0.01	ENSRNOT00000009431	Rpl7 Links NCBI RGD Ensembl Show fit	ribosomal protein L7

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:0060061	Spemann organizer formation(GO:0060061)
0.1	0.4	GO:0072268	specification of loop of Henle identity(GO:0072086) pattern specification involved in metanephros development(GO:0072268)
0.1	0.2	GO:1903588	negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis(GO:1903588)
0.1	0.2	GO:0060648	mammary gland bud morphogenesis(GO:0060648)
0.1	0.2	GO:0021797	neuroblast differentiation(GO:0014016) forebrain anterior/posterior pattern specification(GO:0021797)
0.0	0.1	GO:1904207	regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904207) positive regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904209) positive regulation of metalloendopeptidase activity(GO:1904685)
0.0	0.1	GO:2001201	calcium-independent cell-matrix adhesion(GO:0007161) interaction with other organism via secreted substance involved in symbiotic interaction(GO:0052047) regulation of transforming growth factor-beta secretion(GO:2001201)
0.0	0.1	GO:0033058	directional locomotion(GO:0033058)
0.0	0.1	GO:2000820	negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000820)
0.0	0.1	GO:0021817	nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration(GO:0021817) nuclear migration along microtubule(GO:0030473) nuclear matrix anchoring at nuclear membrane(GO:0090292)
0.0	0.1	GO:0044778	meiotic DNA integrity checkpoint(GO:0044778)
0.0	0.1	GO:2000182	cellular response to nitrite(GO:0071250) response to nitrite(GO:0080033) response to resveratrol(GO:1904638) regulation of progesterone biosynthetic process(GO:2000182)
0.0	0.1	GO:0060354	negative regulation of cell adhesion molecule production(GO:0060354)
0.0	0.1	GO:0009992	cellular water homeostasis(GO:0009992)
0.0	0.1	GO:2000660	negative regulation of interleukin-1-mediated signaling pathway(GO:2000660)
0.0	0.1	GO:0071387	cellular response to cortisol stimulus(GO:0071387)
0.0	0.3	GO:0042759	long-chain fatty acid biosynthetic process(GO:0042759)
0.0	0.1	GO:0046725	negative regulation by virus of viral protein levels in host cell(GO:0046725)
0.0	0.1	GO:0006419	alanyl-tRNA aminoacylation(GO:0006419)
0.0	0.1	GO:0045041	protein import into mitochondrial intermembrane space(GO:0045041)
0.0	0.1	GO:0071104	response to interleukin-9(GO:0071104)
0.0	0.1	GO:0002317	plasma cell differentiation(GO:0002317)
0.0	0.0	GO:1902527	positive regulation of protein monoubiquitination(GO:1902527)
0.0	0.0	GO:0015692	nickel cation transport(GO:0015675) vanadium ion transport(GO:0015676) lead ion transport(GO:0015692) nickel cation transmembrane transport(GO:0035444)
0.0	0.0	GO:0030240	skeletal muscle thin filament assembly(GO:0030240)
0.0	0.3	GO:0045745	positive regulation of G-protein coupled receptor protein signaling pathway(GO:0045745)
0.0	0.0	GO:0061113	positive regulation of hh target transcription factor activity(GO:0007228) pancreas morphogenesis(GO:0061113)
0.0	0.0	GO:0019262	N-acetylneuraminate catabolic process(GO:0019262)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0005945	6-phosphofructokinase complex(GO:0005945)
0.0	0.1	GO:0033269	internode region of axon(GO:0033269)
0.0	0.1	GO:0014731	spectrin-associated cytoskeleton(GO:0014731)
0.0	1.3	GO:0031594	neuromuscular junction(GO:0031594)
0.0	0.0	GO:0070826	paraferritin complex(GO:0070826)
0.0	0.1	GO:0030896	checkpoint clamp complex(GO:0030896)
0.0	0.0	GO:0034774	secretory granule lumen(GO:0034774)
0.0	0.1	GO:0005577	fibrinogen complex(GO:0005577)
0.0	0.1	GO:0034992	microtubule organizing center attachment site(GO:0034992) LINC complex(GO:0034993)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	GO:0019911	structural constituent of myelin sheath(GO:0019911)
0.0	0.2	GO:0008321	Ral guanyl-nucleotide exchange factor activity(GO:0008321)
0.0	0.1	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity(GO:0004809)
0.0	0.1	GO:0035939	microsatellite binding(GO:0035939)
0.0	0.4	GO:0048018	receptor agonist activity(GO:0048018)
0.0	0.1	GO:0033149	FFAT motif binding(GO:0033149)
0.0	0.1	GO:0000703	oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity(GO:0000703)
0.0	0.1	GO:0003872	6-phosphofructokinase activity(GO:0003872)
0.0	0.1	GO:0004813	alanine-tRNA ligase activity(GO:0004813)
0.0	0.0	GO:0031752	D5 dopamine receptor binding(GO:0031752)
0.0	0.1	GO:0045340	mercury ion binding(GO:0045340)
0.0	0.0	GO:0015639	cadmium ion transmembrane transporter activity(GO:0015086) lead ion transmembrane transporter activity(GO:0015094) nickel cation transmembrane transporter activity(GO:0015099) vanadium ion transmembrane transporter activity(GO:0015100) ferrous iron uptake transmembrane transporter activity(GO:0015639) chromium ion transmembrane transporter activity(GO:0070835)
0.0	0.0	GO:0031559	lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.0	0.1	GO:0004977	melanocortin receptor activity(GO:0004977)
0.0	0.1	GO:0005332	gamma-aminobutyric acid:sodium symporter activity(GO:0005332)
0.0	0.0	GO:0004082	bisphosphoglycerate mutase activity(GO:0004082) phosphoglycerate mutase activity(GO:0004619) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity(GO:0046538)
0.0	0.1	GO:0016308	1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0	0.0	GO:0016715	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen(GO:0016715)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	ST PAC1 RECEPTOR PATHWAY	PAC1 Receptor Pathway
0.0	0.4	PID WNT SIGNALING PATHWAY	Wnt signaling network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	1.4	REACTOME ADHERENS JUNCTIONS INTERACTIONS	Genes involved in Adherens junctions interactions
0.0	0.2	REACTOME SIGNALING BY NOTCH4	Genes involved in Signaling by NOTCH4
0.0	0.0	REACTOME PERK REGULATED GENE EXPRESSION	Genes involved in PERK regulated gene expression