GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Pax3 Links NCBI RGD Ensembl	ENSRNOG00000013670	paired box 3

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Pax3	rn6_v1_chr9_-_84101172_84101172	0.39	5.2e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr17_+_15845931 Show fit	0.09	ENSRNOT00000092083	Card19 Links NCBI RGD Ensembl Show fit	caspase recruitment domain family, member 19
chr1_-_124803363 Show fit	0.08	ENSRNOT00000066380	Klf13 Links NCBI RGD Ensembl Show fit	Kruppel-like factor 13
chr15_-_6587367 Show fit	0.06	ENSRNOT00000038449	Zfp385d Links NCBI RGD Ensembl Show fit	zinc finger protein 385D
chr17_-_32015071 Show fit	0.04	ENSRNOT00000070876	LOC100911107 Links NCBI RGD Ensembl Show fit	leukocyte elastase inhibitor A-like
chr9_-_79530821 Show fit	0.04	ENSRNOT00000085619	Mreg Links NCBI RGD Ensembl Show fit	melanoregulin
chr3_+_172195844 Show fit	0.03	ENSRNOT00000034915	Npepl1 Links NCBI RGD Ensembl Show fit	aminopeptidase-like 1
chr6_-_94932806 Show fit	0.03	ENSRNOT00000006346	Ccdc175 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 175
chr4_-_84131030 Show fit	0.03	ENSRNOT00000012196	Cpvl Links NCBI RGD Ensembl Show fit	carboxypeptidase, vitellogenic-like
chr2_+_208750356 Show fit	0.03	ENSRNOT00000041562	Chia Links NCBI RGD Ensembl Show fit	chitinase, acidic
chr2_-_206222248 Show fit	0.03	ENSRNOT00000026075	Olfml3 Links NCBI RGD Ensembl Show fit	olfactomedin-like 3
chr5_-_22799090 Show fit	0.03	ENSRNOT00000076426 ENSRNOT00000077044	Asph Links NCBI RGD Ensembl Show fit	aspartate-beta-hydroxylase
chr6_-_99843245 Show fit	0.02	ENSRNOT00000080270	Gpx2 Links NCBI RGD Ensembl Show fit	glutathione peroxidase 2
chr5_-_22799349 Show fit	0.02	ENSRNOT00000076204	Asph Links NCBI RGD Ensembl Show fit	aspartate-beta-hydroxylase
chr12_-_22021851 Show fit	0.02	ENSRNOT00000039280	Tsc22d4 Links NCBI RGD Ensembl Show fit	TSC22 domain family, member 4
chr15_+_28295368 Show fit	0.02	ENSRNOT00000013786	Slc39a2 Links NCBI RGD Ensembl Show fit	solute carrier family 39 member 2
chr15_-_28092023 Show fit	0.02	ENSRNOT00000090835	Eddm3b Links NCBI RGD Ensembl Show fit	epididymal protein 3B
chr14_+_44413636 Show fit	0.02	ENSRNOT00000003552	Smim14 Links NCBI RGD Ensembl Show fit	small integral membrane protein 14
chr9_-_85243001 Show fit	0.02	ENSRNOT00000020219	Scg2 Links NCBI RGD Ensembl Show fit	secretogranin II
chr12_+_16899025 Show fit	0.02	ENSRNOT00000001716	Psmg3 Links NCBI RGD Ensembl Show fit	proteasome assembly chaperone 3
chr13_+_71107465 Show fit	0.02	ENSRNOT00000003239	Rgs8 Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 8
chr19_-_41029206 Show fit	0.02	ENSRNOT00000023383	Vac14 Links NCBI RGD Ensembl Show fit	Vac14, PIKFYVE complex component
chr4_-_168656673 Show fit	0.02	ENSRNOT00000009341	Gpr19 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 19
chr1_-_65664767 Show fit	0.02	ENSRNOT00000026528 ENSRNOT00000088367	Rps5 Links NCBI RGD Ensembl Show fit	ribosomal protein S5
chr10_+_3225481 Show fit	0.01	ENSRNOT00000093598	Ntan1 Links NCBI RGD Ensembl Show fit	N-terminal asparagine amidase
chr16_-_20511818 Show fit	0.01	ENSRNOT00000026567	Lsm4 Links NCBI RGD Ensembl Show fit	LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
chr18_+_28409955 Show fit	0.01	ENSRNOT00000026989	Paip2 Links NCBI RGD Ensembl Show fit	poly(A) binding protein interacting protein 2
chr9_-_10170428 Show fit	0.01	ENSRNOT00000073048	LOC316124 Links NCBI RGD Ensembl Show fit	similar to gonadotropin-regulated long chain acyl-CoA synthetase
chr12_-_21761487 Show fit	0.01	ENSRNOT00000082910	LOC102550456 Links NCBI RGD Ensembl Show fit	TSC22 domain family protein 4-like
chr20_+_19325121 Show fit	0.01	ENSRNOT00000058151	Phyhipl Links NCBI RGD Ensembl Show fit	phytanoyl-CoA 2-hydroxylase interacting protein-like
chrY_-_1398030 Show fit	0.01	ENSRNOT00000088719	Usp9y Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 9, Y-linked
chr15_-_27798408 Show fit	0.01	ENSRNOT00000088981	Tep1 Links NCBI RGD Ensembl Show fit	telomerase associated protein 1
chr16_+_50152008 Show fit	0.01	ENSRNOT00000019237	Klkb1 Links NCBI RGD Ensembl Show fit	kallikrein B1
chr18_+_25962855 Show fit	0.01	ENSRNOT00000078822	Camk4 Links NCBI RGD Ensembl Show fit	calcium/calmodulin-dependent protein kinase IV
chr6_-_105316024 Show fit	0.01	ENSRNOT00000009483	Med6 Links NCBI RGD Ensembl Show fit	mediator complex subunit 6
chr15_-_27798839 Show fit	0.01	ENSRNOT00000079506	Tep1 Links NCBI RGD Ensembl Show fit	telomerase associated protein 1
chr10_-_35800120 Show fit	0.01	ENSRNOT00000004361	Maml1 Links NCBI RGD Ensembl Show fit	mastermind-like transcriptional coactivator 1
chr2_+_186685104 Show fit	0.01	ENSRNOT00000057022	Cd5l Links NCBI RGD Ensembl Show fit	Cd5 molecule-like
chr16_-_20534209 Show fit	0.01	ENSRNOT00000026601	Mk1 Links NCBI RGD Ensembl Show fit	Mk1 protein
chr6_-_138662365 Show fit	0.00	ENSRNOT00000066209 ENSRNOT00000084892	Ighm Links NCBI RGD Ensembl Show fit	immunoglobulin heavy constant mu
chr17_-_45746753 Show fit	0.00	ENSRNOT00000077475	RGD1564243 Links NCBI RGD Ensembl Show fit	similar to brain Zn-finger protein
chr7_-_116963281 Show fit	0.00	ENSRNOT00000082058 ENSRNOT00000012306	Tsta3 Links NCBI RGD Ensembl Show fit	tissue specific transplantation antigen P35B
chr2_+_201289357 Show fit	0.00	ENSRNOT00000067358	Tbx15 Links NCBI RGD Ensembl Show fit	T-box 15
chr16_+_70068378 Show fit	0.00	ENSRNOT00000073254	RGD1308750 Links NCBI RGD Ensembl Show fit	similar to DNA segment, Chr 19, Brigham & Womens Genetics 1357 expressed
chr11_-_78456200 Show fit	0.00	ENSRNOT00000067251 ENSRNOT00000036179	Tp63 Links NCBI RGD Ensembl Show fit	tumor protein p63
chr15_+_87722221 Show fit	0.00	ENSRNOT00000082688	Scel Links NCBI RGD Ensembl Show fit	sciellin
chr19_-_24487396 Show fit	0.00	ENSRNOT00000031614	Elmod2 Links NCBI RGD Ensembl Show fit	ELMO domain containing 2
chr1_-_80221710 Show fit	0.00	ENSRNOT00000091687	Fosb Links NCBI RGD Ensembl Show fit	FosB proto-oncogene, AP-1 transcription factor subunit
chr11_-_84037938 Show fit	0.00	ENSRNOT00000002327	Abcf3 Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily F member 3
chr12_+_17614632 Show fit	0.00	ENSRNOT00000031896	Prkar1b Links NCBI RGD Ensembl Show fit	protein kinase cAMP-dependent type 1 regulatory subunit beta
chr7_-_111722964 Show fit	0.00	ENSRNOT00000041802	Rps19l1 Links NCBI RGD Ensembl Show fit	ribosomal protein S19-like 1
chr1_-_224698514 Show fit	0.00	ENSRNOT00000024234	Slc22a25 Links NCBI RGD Ensembl Show fit	solute carrier family 22, member 25
chr15_+_57290849 Show fit	0.00	ENSRNOT00000014909	Cpb2 Links NCBI RGD Ensembl Show fit	carboxypeptidase B2

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