GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Nr5a2 Links NCBI RGD Ensembl	ENSRNOG00000000653	nuclear receptor subfamily 5, group A, member 2

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Nr5a2	rn6_v1_chr13_-_53870428_53870428	0.15	8.1e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr2_-_198360678 Show fit	0.88	ENSRNOT00000051917	Hist2h2ac Links NCBI RGD Ensembl Show fit	histone cluster 2 H2A family member c
chr5_+_50381244 Show fit	0.49	ENSRNOT00000012385	Cga Links NCBI RGD Ensembl Show fit	glycoprotein hormones, alpha polypeptide
chr17_+_44520537 Show fit	0.48	ENSRNOT00000077985	hist1h2ail2 Links NCBI RGD Ensembl Show fit	histone cluster 1, H2ai-like2
chr3_+_147609095 Show fit	0.42	ENSRNOT00000041456	Srxn1 Links NCBI RGD Ensembl Show fit	sulfiredoxin 1
chr10_+_110139783 Show fit	0.38	ENSRNOT00000054939	Slc16a3 Links NCBI RGD Ensembl Show fit	solute carrier family 16 member 3
chr14_+_43694183 Show fit	0.37	ENSRNOT00000046342	RGD1563570 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S23
chr15_+_41069507 Show fit	0.36	ENSRNOT00000018533	C1qtnf9 Links NCBI RGD Ensembl Show fit	C1q and tumor necrosis factor related protein 9
chr1_+_276659542 Show fit	0.35	ENSRNOT00000019681	Tcf7l2 Links NCBI RGD Ensembl Show fit	transcription factor 7 like 2
chr1_+_72882806 Show fit	0.34	ENSRNOT00000024640	Tnni3 Links NCBI RGD Ensembl Show fit	troponin I3, cardiac type
chr17_-_44758170 Show fit	0.33	ENSRNOT00000091176	Hist1h2bo Links NCBI RGD Ensembl Show fit	histone cluster 1 H2B family member o
chr15_-_33656089 Show fit	0.33	ENSRNOT00000024186	Myh7 Links NCBI RGD Ensembl Show fit	myosin heavy chain 7
chr2_-_187742747 Show fit	0.30	ENSRNOT00000026530	Bglap Links NCBI RGD Ensembl Show fit	bone gamma-carboxyglutamate protein
chr4_-_123118186 Show fit	0.29	ENSRNOT00000038096	LOC100361898 Links NCBI RGD Ensembl Show fit	coiled-coil-helix-coiled-coil-helix domain containing 4
chr4_+_165732643 Show fit	0.29	ENSRNOT00000034403	LOC690326 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC690326
chr10_-_97582188 Show fit	0.29	ENSRNOT00000005076	Rgs9 Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 9
chr3_+_58164931 Show fit	0.29	ENSRNOT00000002078	Dlx1 Links NCBI RGD Ensembl Show fit	distal-less homeobox 1
chr20_-_5618254 Show fit	0.27	ENSRNOT00000092326 ENSRNOT00000000576	Bak1 Links NCBI RGD Ensembl Show fit	BCL2-antagonist/killer 1
chr7_+_12229379 Show fit	0.26	ENSRNOT00000060811	Adamtsl5 Links NCBI RGD Ensembl Show fit	ADAMTS-like 5
chr17_-_44834305 Show fit	0.25	ENSRNOT00000084303	Hist1h2bd Links NCBI RGD Ensembl Show fit	histone cluster 1, H2bd
chr1_-_167005839 Show fit	0.24	ENSRNOT00000027261	Lrrc51 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing 51
chr6_+_55085313 Show fit	0.24	ENSRNOT00000005458	AABR07063901.1 Links NCBI RGD Ensembl Show fit
chr11_+_64472072 Show fit	0.22	ENSRNOT00000042756	RGD1563835 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein L27
chr8_-_128266639 Show fit	0.22	ENSRNOT00000064555 ENSRNOT00000066932	Scn5a Links NCBI RGD Ensembl Show fit	sodium voltage-gated channel alpha subunit 5
chr1_-_89258935 Show fit	0.22	ENSRNOT00000003180	LOC100361079 Links NCBI RGD Ensembl Show fit	ribosomal protein L36-like
chr12_+_47024442 Show fit	0.21	ENSRNOT00000001545	Cox6a1 Links NCBI RGD Ensembl Show fit	cytochrome c oxidase subunit 6A1
chr1_+_221773254 Show fit	0.21	ENSRNOT00000028646	Rasgrp2 Links NCBI RGD Ensembl Show fit	RAS guanyl releasing protein 2
chr10_+_64930023 Show fit	0.20	ENSRNOT00000071102	AABR07030053.1 Links NCBI RGD Ensembl Show fit
chr4_+_145427367 Show fit	0.20	ENSRNOT00000037788	Il17rc Links NCBI RGD Ensembl Show fit	interleukin 17 receptor C
chr9_+_43259709 Show fit	0.20	ENSRNOT00000022487	Cox5b Links NCBI RGD Ensembl Show fit	cytochrome c oxidase subunit 5B
chr7_-_121311565 Show fit	0.19	ENSRNOT00000092252	Rpl3 Links NCBI RGD Ensembl Show fit	ribosomal protein L3
chr5_-_151397603 Show fit	0.19	ENSRNOT00000076866	Gpr3 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 3
chr17_+_44758460 Show fit	0.19	ENSRNOT00000089436	Hist1h2an Links NCBI RGD Ensembl Show fit	histone cluster 1, H2an
chr17_+_43627930 Show fit	0.18	ENSRNOT00000081719	LOC102549061 Links NCBI RGD Ensembl Show fit	histone H2B type 1-N-like
chr9_+_61692154 Show fit	0.18	ENSRNOT00000082300	Hspe1 Links NCBI RGD Ensembl Show fit	heat shock protein family E member 1
chr17_-_89163113 Show fit	0.17	ENSRNOT00000050445	LOC100360843 Links NCBI RGD Ensembl Show fit	ribosomal protein S19-like
chr14_+_73674753 Show fit	0.17	ENSRNOT00000040676	RGD1561694 Links NCBI RGD Ensembl Show fit	similar to High mobility group protein 2 (HMG-2)
chr5_+_64790186 Show fit	0.17	ENSRNOT00000078502	Zfp189 Links NCBI RGD Ensembl Show fit	zinc finger protein 189
chr1_-_222468896 Show fit	0.16	ENSRNOT00000028754	Cox8a Links NCBI RGD Ensembl Show fit	cytochrome c oxidase subunit 8A
chr11_+_70687500 Show fit	0.15	ENSRNOT00000037432	AC110981.1 Links NCBI RGD Ensembl Show fit
chr5_-_136002900 Show fit	0.15	ENSRNOT00000025197	Plk3 Links NCBI RGD Ensembl Show fit	polo-like kinase 3
chr8_+_118378059 Show fit	0.15	ENSRNOT00000043247	AABR07071482.1 Links NCBI RGD Ensembl Show fit
chr19_-_57699113 Show fit	0.15	ENSRNOT00000026767	Egln1 Links NCBI RGD Ensembl Show fit	egl-9 family hypoxia-inducible factor 1
chr5_+_173640780 Show fit	0.15	ENSRNOT00000027476	Perm1 Links NCBI RGD Ensembl Show fit	PPARGC1 and ESRR induced regulator, muscle 1
chr3_-_123702732 Show fit	0.15	ENSRNOT00000028859	RGD1311739 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 1700037H04
chrX_+_15273933 Show fit	0.14	ENSRNOT00000075082	LOC108348091 Links NCBI RGD Ensembl Show fit	erythroid transcription factor
chr17_-_44748188 Show fit	0.13	ENSRNOT00000081970	LOC103690190 Links NCBI RGD Ensembl Show fit	histone H2A type 1-E
chr5_-_150323063 Show fit	0.13	ENSRNOT00000014084	Oprd1 Links NCBI RGD Ensembl Show fit	opioid receptor, delta 1
chr6_-_6842758 Show fit	0.13	ENSRNOT00000006094	Kcng3 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel modifier subfamily G member 3
chr9_-_15628881 Show fit	0.13	ENSRNOT00000077318 ENSRNOT00000020950	Guca1b Links NCBI RGD Ensembl Show fit	guanylate cyclase activator 1B
chr2_-_186245771 Show fit	0.12	ENSRNOT00000066004 ENSRNOT00000079954	Dclk2 Links NCBI RGD Ensembl Show fit	doublecortin-like kinase 2
chr10_+_45289741 Show fit	0.12	ENSRNOT00000066190	Hist3h2ba Links NCBI RGD Ensembl Show fit	histone cluster 3, H2ba
chr2_+_206064179 Show fit	0.12	ENSRNOT00000025953	Syt6 Links NCBI RGD Ensembl Show fit	synaptotagmin 6
chr7_+_129860327 Show fit	0.12	ENSRNOT00000043461	Pim3 Links NCBI RGD Ensembl Show fit	Pim-3 proto-oncogene, serine/threonine kinase
chr5_+_64326733 Show fit	0.12	ENSRNOT00000065775	Tmeff1 Links NCBI RGD Ensembl Show fit	transmembrane protein with EGF-like and two follistatin-like domains 1
chrX_-_139916883 Show fit	0.12	ENSRNOT00000090442	Gpc3 Links NCBI RGD Ensembl Show fit	glypican 3
chr8_-_118378460 Show fit	0.11	ENSRNOT00000047247	RGD1563705 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S23
chr14_-_84937725 Show fit	0.11	ENSRNOT00000083839	Uqcr10 Links NCBI RGD Ensembl Show fit	ubiquinol-cytochrome c reductase, complex III subunit X
chr4_-_148845267 Show fit	0.11	ENSRNOT00000037397	Tmem72 Links NCBI RGD Ensembl Show fit	transmembrane protein 72
chr19_-_10653800 Show fit	0.11	ENSRNOT00000022128	Cx3cl1 Links NCBI RGD Ensembl Show fit	C-X3-C motif chemokine ligand 1
chr7_-_119158173 Show fit	0.11	ENSRNOT00000067483 ENSRNOT00000078528	Txn2 Links NCBI RGD Ensembl Show fit	thioredoxin 2
chr11_+_37798370 Show fit	0.11	ENSRNOT00000002679	Bace2 Links NCBI RGD Ensembl Show fit	beta-site APP-cleaving enzyme 2
chr13_-_85622314 Show fit	0.11	ENSRNOT00000005719	Mgst3 Links NCBI RGD Ensembl Show fit	microsomal glutathione S-transferase 3
chr16_-_7681576 Show fit	0.10	ENSRNOT00000026550	Colq Links NCBI RGD Ensembl Show fit	collagen like tail subunit of asymmetric acetylcholinesterase
chr2_-_119140110 Show fit	0.10	ENSRNOT00000058810	AABR07009978.1 Links NCBI RGD Ensembl Show fit
chr7_+_121889157 Show fit	0.10	ENSRNOT00000024835	Fam83f Links NCBI RGD Ensembl Show fit	family with sequence similarity 83, member F
chr5_+_157423213 Show fit	0.10	ENSRNOT00000023431	Tmco4 Links NCBI RGD Ensembl Show fit	transmembrane and coiled-coil domains 4
chr1_+_197813963 Show fit	0.10	ENSRNOT00000045531	LOC100361060 Links NCBI RGD Ensembl Show fit	ribosomal protein L36-like
chr16_+_19874034 Show fit	0.09	ENSRNOT00000023579	Mrpl34 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein L34
chr10_+_109658032 Show fit	0.09	ENSRNOT00000054965	Mrpl12 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein L12
chr19_-_37427989 Show fit	0.09	ENSRNOT00000022863	Tppp3 Links NCBI RGD Ensembl Show fit	tubulin polymerization-promoting protein family member 3
chr6_+_126434226 Show fit	0.09	ENSRNOT00000090857	Chga Links NCBI RGD Ensembl Show fit	chromogranin A
chr7_+_35125424 Show fit	0.09	ENSRNOT00000085978 ENSRNOT00000010117	Ndufa12 Links NCBI RGD Ensembl Show fit	NADH:ubiquinone oxidoreductase subunit A12
chr2_-_198706428 Show fit	0.09	ENSRNOT00000085006	Polr3gl Links NCBI RGD Ensembl Show fit	RNA polymerase III subunit G like
chr8_+_117280705 Show fit	0.09	ENSRNOT00000085038	Usp19 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 19
chr5_-_157573183 Show fit	0.08	ENSRNOT00000064418	Minos1 Links NCBI RGD Ensembl Show fit	mitochondrial inner membrane organizing system 1
chr4_+_67378188 Show fit	0.08	ENSRNOT00000030892	Ndufb2 Links NCBI RGD Ensembl Show fit	NADH:ubiquinone oxidoreductase subunit B2
chr7_-_12424367 Show fit	0.08	ENSRNOT00000060698	Midn Links NCBI RGD Ensembl Show fit	midnolin
chr19_-_54245855 Show fit	0.08	ENSRNOT00000023855	Emc8 Links NCBI RGD Ensembl Show fit	ER membrane protein complex subunit 8
chr1_-_173764246 Show fit	0.08	ENSRNOT00000019690 ENSRNOT00000086944	Lmo1 Links NCBI RGD Ensembl Show fit	LIM domain only 1
chr8_-_130491998 Show fit	0.08	ENSRNOT00000064114	Higd1a Links NCBI RGD Ensembl Show fit	HIG1 hypoxia inducible domain family, member 1A
chr12_-_2545740 Show fit	0.08	ENSRNOT00000075527	Tgfbr3l Links NCBI RGD Ensembl Show fit	transforming growth factor beta receptor 3 like
chr19_+_26084903 Show fit	0.08	ENSRNOT00000004799	Prdx2 Links NCBI RGD Ensembl Show fit	peroxiredoxin 2
chr14_+_89314176 Show fit	0.08	ENSRNOT00000006765	Upp1 Links NCBI RGD Ensembl Show fit	uridine phosphorylase 1
chr7_+_2504695 Show fit	0.08	ENSRNOT00000003965	Atp5b Links NCBI RGD Ensembl Show fit	ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
chr1_-_218374619 Show fit	0.08	ENSRNOT00000017860	Rmt1 Links NCBI RGD Ensembl Show fit	mammary cancer associated protein RMT-1
chr3_-_79728879 Show fit	0.07	ENSRNOT00000012425	Ndufs3 Links NCBI RGD Ensembl Show fit	NADH dehydrogenase (ubiquinone) Fe-S protein 3
chr6_-_135412312 Show fit	0.07	ENSRNOT00000010610	Ankrd9 Links NCBI RGD Ensembl Show fit	ankyrin repeat domain 9
chr20_-_48294948 Show fit	0.07	ENSRNOT00000072716	LOC683897 Links NCBI RGD Ensembl Show fit	similar to Protein C6orf203
chr9_+_10471742 Show fit	0.07	ENSRNOT00000072276	Safb2 Links NCBI RGD Ensembl Show fit	scaffold attachment factor B2
chr8_+_116094851 Show fit	0.07	ENSRNOT00000084120	RGD1307461 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 6430571L13 gene; similar to g20 protein
chr5_-_160403373 Show fit	0.07	ENSRNOT00000018393	Ctrc Links NCBI RGD Ensembl Show fit	chymotrypsin C
chr10_+_67862054 Show fit	0.07	ENSRNOT00000031746	Cdk5r1 Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase 5 regulatory subunit 1
chr18_+_83777665 Show fit	0.07	ENSRNOT00000018682	Cbln2 Links NCBI RGD Ensembl Show fit	cerebellin 2 precursor
chr7_-_11330278 Show fit	0.07	ENSRNOT00000027730	Matk Links NCBI RGD Ensembl Show fit	megakaryocyte-associated tyrosine kinase
chr5_+_150032999 Show fit	0.07	ENSRNOT00000013301	Srsf4 Links NCBI RGD Ensembl Show fit	serine and arginine rich splicing factor 4
chr2_-_140464607 Show fit	0.07	ENSRNOT00000058190	Ndufc1 Links NCBI RGD Ensembl Show fit	NADH:ubiquinone oxidoreductase subunit C1
chr13_+_52413241 Show fit	0.07	ENSRNOT00000035157	AABR07020999.1 Links NCBI RGD Ensembl Show fit
chr9_-_10471009 Show fit	0.07	ENSRNOT00000072868	Safb Links NCBI RGD Ensembl Show fit	scaffold attachment factor B
chr1_-_143535583 Show fit	0.07	ENSRNOT00000087785	Homer2 Links NCBI RGD Ensembl Show fit	homer scaffolding protein 2
chr3_+_94549180 Show fit	0.06	ENSRNOT00000016318	Cstf3 Links NCBI RGD Ensembl Show fit	cleavage stimulation factor subunit 3
chr9_+_17705212 Show fit	0.06	ENSRNOT00000026728	Tmem63b Links NCBI RGD Ensembl Show fit	transmembrane protein 63B
chr8_-_119157071 Show fit	0.06	ENSRNOT00000028963	Tmie Links NCBI RGD Ensembl Show fit	transmembrane inner ear
chr3_+_93495106 Show fit	0.06	ENSRNOT00000029922 ENSRNOT00000085760	Abtb2 Links NCBI RGD Ensembl Show fit	ankyrin repeat and BTB domain containing 2
chrX_+_68774699 Show fit	0.06	ENSRNOT00000081662	Stard8 Links NCBI RGD Ensembl Show fit	StAR-related lipid transfer domain containing 8
chr13_-_36101411 Show fit	0.06	ENSRNOT00000074471	Tmem37 Links NCBI RGD Ensembl Show fit	transmembrane protein 37
chr6_-_136145837 Show fit	0.06	ENSRNOT00000015122	Ckb Links NCBI RGD Ensembl Show fit	creatine kinase B
chr15_-_36114752 Show fit	0.06	ENSRNOT00000045209	Gzmbl3 Links NCBI RGD Ensembl Show fit	Granzyme B-like 3
chr2_-_183031214 Show fit	0.06	ENSRNOT00000013260	LOC679811 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA D930015E06
chr12_+_21767606 Show fit	0.06	ENSRNOT00000059602	LOC103691013 Links NCBI RGD Ensembl Show fit	neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1-like
chr12_+_25264192 Show fit	0.06	ENSRNOT00000079392	Gtf2ird1 Links NCBI RGD Ensembl Show fit	GTF2I repeat domain containing 1
chr7_+_110031696 Show fit	0.06	ENSRNOT00000012753	Khdrbs3 Links NCBI RGD Ensembl Show fit	KH RNA binding domain containing, signal transduction associated 3
chr1_-_222250980 Show fit	0.06	ENSRNOT00000028734	Nudt22 Links NCBI RGD Ensembl Show fit	nudix hydrolase 22
chr11_-_32088002 Show fit	0.06	ENSRNOT00000002732	Atp5o Links NCBI RGD Ensembl Show fit	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
chr3_+_4083864 Show fit	0.05	ENSRNOT00000006186	Fam69b Links NCBI RGD Ensembl Show fit	family with sequence similarity 69, member B
chr13_-_47831110 Show fit	0.05	ENSRNOT00000061070	Mapkapk2 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase-activated protein kinase 2
chr10_+_78168715 Show fit	0.05	ENSRNOT00000072294	Cox11 Links NCBI RGD Ensembl Show fit	COX11 cytochrome c oxidase copper chaperone
chr2_+_154556029 Show fit	0.05	ENSRNOT00000084238	Gmps Links NCBI RGD Ensembl Show fit	guanine monophosphate synthase
chr1_-_222350173 Show fit	0.05	ENSRNOT00000030625	Flrt1 Links NCBI RGD Ensembl Show fit	fibronectin leucine rich transmembrane protein 1
chr9_+_99998275 Show fit	0.05	ENSRNOT00000074395	Gpc1 Links NCBI RGD Ensembl Show fit	glypican 1
chr1_+_220325352 Show fit	0.05	ENSRNOT00000027258	LOC108348098 Links NCBI RGD Ensembl Show fit	breast cancer metastasis-suppressor 1 homolog
chr8_-_122402127 Show fit	0.05	ENSRNOT00000074238 ENSRNOT00000076548	Crtapl1 Links NCBI RGD Ensembl Show fit	cartilage associated protein-like 1
chr18_+_2416871 Show fit	0.05	ENSRNOT00000081399	Gata6 Links NCBI RGD Ensembl Show fit	GATA binding protein 6
chr4_-_78879294 Show fit	0.05	ENSRNOT00000084543	Igf2bp3 Links NCBI RGD Ensembl Show fit	insulin-like growth factor 2 mRNA binding protein 3
chr1_-_266074181 Show fit	0.05	ENSRNOT00000026378	Psd Links NCBI RGD Ensembl Show fit	pleckstrin and Sec7 domain containing
chr15_+_2631529 Show fit	0.05	ENSRNOT00000018897	Comtd1 Links NCBI RGD Ensembl Show fit	catechol-O-methyltransferase domain containing 1
chr18_-_27749235 Show fit	0.05	ENSRNOT00000026696	Hspa9 Links NCBI RGD Ensembl Show fit	heat shock protein family A member 9
chr19_-_11326139 Show fit	0.05	ENSRNOT00000025669	Mt3 Links NCBI RGD Ensembl Show fit	metallothionein 3
chr2_+_119139717 Show fit	0.04	ENSRNOT00000016051	Ndufb5 Links NCBI RGD Ensembl Show fit	NADH:ubiquinone oxidoreductase subunit B5
chr4_+_66405166 Show fit	0.04	ENSRNOT00000077486 ENSRNOT00000067097	Clec2l Links NCBI RGD Ensembl Show fit	C-type lectin domain family 2, member L
chr5_-_173209768 Show fit	0.04	ENSRNOT00000045053	Atad3a Links NCBI RGD Ensembl Show fit	ATPase family, AAA domain containing 3A
chr3_+_11607225 Show fit	0.04	ENSRNOT00000072685	St6galnac4 Links NCBI RGD Ensembl Show fit	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
chr2_-_88113029 Show fit	0.04	ENSRNOT00000013354	Car2 Links NCBI RGD Ensembl Show fit	carbonic anhydrase 2
chr5_-_155772040 Show fit	0.04	ENSRNOT00000036788	Cela3b Links NCBI RGD Ensembl Show fit	chymotrypsin-like elastase family, member 3B
chr2_+_154555871 Show fit	0.04	ENSRNOT00000076292	Gmps Links NCBI RGD Ensembl Show fit	guanine monophosphate synthase
chr14_+_84953786 Show fit	0.04	ENSRNOT00000010332	Zmat5 Links NCBI RGD Ensembl Show fit	zinc finger, matrin type 5
chr3_+_113319456 Show fit	0.04	ENSRNOT00000051354	Ckmt1 Links NCBI RGD Ensembl Show fit	creatine kinase, mitochondrial 1
chr1_+_252375933 Show fit	0.04	ENSRNOT00000078405	Lipn Links NCBI RGD Ensembl Show fit	lipase, family member N
chr3_+_113318563 Show fit	0.04	ENSRNOT00000089230	Ckmt1 Links NCBI RGD Ensembl Show fit	creatine kinase, mitochondrial 1
chr9_+_81566074 Show fit	0.04	ENSRNOT00000074131 ENSRNOT00000046229 ENSRNOT00000090383	Pnkd Links NCBI RGD Ensembl Show fit	paroxysmal nonkinesigenic dyskinesia
chr19_+_52521809 Show fit	0.04	ENSRNOT00000081019	Klhl36 Links NCBI RGD Ensembl Show fit	kelch-like family member 36
chr6_+_128750795 Show fit	0.04	ENSRNOT00000005781	Glrx5 Links NCBI RGD Ensembl Show fit	glutaredoxin 5
chr3_+_133232432 Show fit	0.04	ENSRNOT00000006412	Ndufaf5 Links NCBI RGD Ensembl Show fit	NADH:ubiquinone oxidoreductase complex assembly factor 5
chr7_+_130308532 Show fit	0.04	ENSRNOT00000011941	Miox Links NCBI RGD Ensembl Show fit	myo-inositol oxygenase
chr14_-_43694584 Show fit	0.04	ENSRNOT00000041866	AABR07072400.1 Links NCBI RGD Ensembl Show fit
chr9_+_40975836 Show fit	0.04	ENSRNOT00000084470	Ptpn18 Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, non-receptor type 18
chr19_+_54245950 Show fit	0.04	ENSRNOT00000024033	Cox4i1 Links NCBI RGD Ensembl Show fit	cytochrome c oxidase subunit 4i1
chr14_+_86673775 Show fit	0.04	ENSRNOT00000091873 ENSRNOT00000079015	Ppia Links NCBI RGD Ensembl Show fit	peptidylprolyl isomerase A
chr7_-_120518653 Show fit	0.04	ENSRNOT00000016362	Baiap2l2 Links NCBI RGD Ensembl Show fit	BAI1-associated protein 2-like 2
chr7_+_11724962 Show fit	0.03	ENSRNOT00000026551	Lsm7 Links NCBI RGD Ensembl Show fit	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
chr1_-_175586802 Show fit	0.03	ENSRNOT00000071333	AABR07005027.1 Links NCBI RGD Ensembl Show fit
chrX_-_15707436 Show fit	0.03	ENSRNOT00000085907	Syp Links NCBI RGD Ensembl Show fit	synaptophysin
chr15_-_52134140 Show fit	0.03	ENSRNOT00000013390	Polr3d Links NCBI RGD Ensembl Show fit	RNA polymerase III subunit D
chr7_+_121311024 Show fit	0.03	ENSRNOT00000092260 ENSRNOT00000023066 ENSRNOT00000081377	Syngr1 Links NCBI RGD Ensembl Show fit	synaptogyrin 1
chr17_+_49714294 Show fit	0.03	ENSRNOT00000018190	Rala Links NCBI RGD Ensembl Show fit	RAS like proto-oncogene A
chr5_+_159484370 Show fit	0.03	ENSRNOT00000010593	Sdhb Links NCBI RGD Ensembl Show fit	succinate dehydrogenase complex iron sulfur subunit B
chr1_-_72674271 Show fit	0.03	ENSRNOT00000023744	Kmt5c Links NCBI RGD Ensembl Show fit	lysine methyltransferase 5C
chr17_-_43627629 Show fit	0.03	ENSRNOT00000022965	Hist1h2af Links NCBI RGD Ensembl Show fit	histone cluster 1, H2af
chr1_-_134870255 Show fit	0.03	ENSRNOT00000055829	Chd2 Links NCBI RGD Ensembl Show fit	chromodomain helicase DNA binding protein 2
chrX_+_105575759 Show fit	0.03	ENSRNOT00000088760	Armcx3 Links NCBI RGD Ensembl Show fit	armadillo repeat containing, X-linked 3
chr9_+_17911944 Show fit	0.03	ENSRNOT00000080940	Spats1 Links NCBI RGD Ensembl Show fit	spermatogenesis associated, serine-rich 1
chr10_-_15235740 Show fit	0.03	ENSRNOT00000027170	Mcrip2 Links NCBI RGD Ensembl Show fit	MAPK regulated co-repressor interacting protein 2
chr11_+_86890585 Show fit	0.03	ENSRNOT00000002579	Ranbp1 Links NCBI RGD Ensembl Show fit	RAN binding protein 1
chr4_-_157679962 Show fit	0.03	ENSRNOT00000050443	Gapdh Links NCBI RGD Ensembl Show fit	glyceraldehyde-3-phosphate dehydrogenase
chr1_+_142136452 Show fit	0.03	ENSRNOT00000016445	Hddc3 Links NCBI RGD Ensembl Show fit	HD domain containing 3
chr1_-_220467159 Show fit	0.03	ENSRNOT00000075365	Tmem151a Links NCBI RGD Ensembl Show fit	transmembrane protein 151A
chr1_+_224882439 Show fit	0.02	ENSRNOT00000024785	Chrm1 Links NCBI RGD Ensembl Show fit	cholinergic receptor, muscarinic 1
chr4_+_7260575 Show fit	0.02	ENSRNOT00000064893	Fastk Links NCBI RGD Ensembl Show fit	Fas-activated serine/threonine kinase
chr4_-_176720012 Show fit	0.02	ENSRNOT00000017965	Ldhb Links NCBI RGD Ensembl Show fit	lactate dehydrogenase B
chr16_+_16949232 Show fit	0.02	ENSRNOT00000047499	AABR07024795.1 Links NCBI RGD Ensembl Show fit
chr10_+_55675575 Show fit	0.02	ENSRNOT00000057295	Vamp2 Links NCBI RGD Ensembl Show fit	vesicle-associated membrane protein 2
chr7_-_117576737 Show fit	0.02	ENSRNOT00000039795	Dgat1 Links NCBI RGD Ensembl Show fit	diacylglycerol O-acyltransferase 1
chr10_+_39066716 Show fit	0.02	ENSRNOT00000010729	Il5 Links NCBI RGD Ensembl Show fit	interleukin 5
chr6_+_58388333 Show fit	0.02	ENSRNOT00000036337	LOC680646 Links NCBI RGD Ensembl Show fit	similar to 40S ribosomal protein S2
chr19_-_21492468 Show fit	0.02	ENSRNOT00000087660 ENSRNOT00000048345 ENSRNOT00000020770	Lonp2 Links NCBI RGD Ensembl Show fit	lon peptidase 2, peroxisomal
chr8_-_76239995 Show fit	0.02	ENSRNOT00000071321	LOC100912027 Links NCBI RGD Ensembl Show fit	60S ribosomal protein L27-like
chr9_-_46309451 Show fit	0.02	ENSRNOT00000018684	Rnf149 Links NCBI RGD Ensembl Show fit	ring finger protein 149
chr5_-_60658521 Show fit	0.02	ENSRNOT00000092866 ENSRNOT00000093024 ENSRNOT00000016875	Tomm5 Links NCBI RGD Ensembl Show fit Fbxo10 Links NCBI RGD Ensembl Show fit	translocase of outer mitochondrial membrane 5 F-box protein 10
chr3_-_141411170 Show fit	0.02	ENSRNOT00000017364	Nkx2-2 Links NCBI RGD Ensembl Show fit	NK2 homeobox 2
chr11_+_61661310 Show fit	0.02	ENSRNOT00000093325	Zdhhc23 Links NCBI RGD Ensembl Show fit	zinc finger, DHHC-type containing 23
chr11_-_72109964 Show fit	0.01	ENSRNOT00000058917	AABR07034445.1 Links NCBI RGD Ensembl Show fit
chr7_-_74735650 Show fit	0.01	ENSRNOT00000014407	Cox6c Links NCBI RGD Ensembl Show fit	cytochrome c oxidase subunit 6C
chr15_-_5894854 Show fit	0.01	ENSRNOT00000024427	Cd99l2 Links NCBI RGD Ensembl Show fit	CD99 molecule-like 2
chr4_+_9821541 Show fit	0.01	ENSRNOT00000015733	Slc26a5 Links NCBI RGD Ensembl Show fit	solute carrier family 26 member 5
chr12_-_30566032 Show fit	0.01	ENSRNOT00000093378	Gbas Links NCBI RGD Ensembl Show fit	glioblastoma amplified sequence
chr14_-_85318194 Show fit	0.01	ENSRNOT00000065135	Gas2l1 Links NCBI RGD Ensembl Show fit	growth arrest-specific 2 like 1
chr20_-_29029905 Show fit	0.01	ENSRNOT00000075682	Oit3 Links NCBI RGD Ensembl Show fit	oncoprotein induced transcript 3
chr13_-_51076852 Show fit	0.01	ENSRNOT00000078993	Adora1 Links NCBI RGD Ensembl Show fit	adenosine A1 receptor
chr5_+_140923914 Show fit	0.01	ENSRNOT00000020929	Heyl Links NCBI RGD Ensembl Show fit	hes-related family bHLH transcription factor with YRPW motif-like
chr15_-_35417273 Show fit	0.01	ENSRNOT00000083961 ENSRNOT00000041430	Gzmb Links NCBI RGD Ensembl Show fit	granzyme B
chr1_-_165606375 Show fit	0.01	ENSRNOT00000024290	Mrpl48 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein L48
chr19_+_22569999 Show fit	0.01	ENSRNOT00000022573	Dnaja2 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member A2
chr4_-_80333326 Show fit	0.01	ENSRNOT00000014058	LOC100363502 Links NCBI RGD Ensembl Show fit	cytochrome c, somatic-like
chr3_-_3476215 Show fit	0.01	ENSRNOT00000024352	Ubac1 Links NCBI RGD Ensembl Show fit	UBA domain containing 1
chr15_+_5265307 Show fit	0.01	ENSRNOT00000031807	LOC108348081 Links NCBI RGD Ensembl Show fit	CD99 antigen-like protein 2
chr2_-_210873024 Show fit	0.01	ENSRNOT00000026051	Ampd2 Links NCBI RGD Ensembl Show fit	adenosine monophosphate deaminase 2
chr20_+_21316826 Show fit	0.01	ENSRNOT00000000785	RGD1306739 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 1700040L02
chr4_+_145653602 Show fit	0.01	ENSRNOT00000038964	Tatdn2 Links NCBI RGD Ensembl Show fit	TatD DNase domain containing 2
chr8_-_116469915 Show fit	0.01	ENSRNOT00000024193	Sema3f Links NCBI RGD Ensembl Show fit	semaphorin 3F
chr18_-_56331991 Show fit	0.01	ENSRNOT00000085841 ENSRNOT00000091220	Slc6a7 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 7
chr9_-_100888107 Show fit	0.01	ENSRNOT00000024794	Thap4 Links NCBI RGD Ensembl Show fit	THAP domain containing 4

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0048619	regulation of heparan sulfate proteoglycan biosynthetic process(GO:0010908) positive regulation of heparan sulfate proteoglycan biosynthetic process(GO:0010909) embryonic hindgut morphogenesis(GO:0048619)
0.1	0.3	GO:0031444	slow-twitch skeletal muscle fiber contraction(GO:0031444) response to 3,3',5-triiodo-L-thyronine(GO:1905242) cellular response to 3,3',5-triiodo-L-thyronine(GO:1905243)
0.1	0.3	GO:0045041	protein import into mitochondrial intermembrane space(GO:0045041)
0.1	0.3	GO:0021882	regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment(GO:0021882) commitment of multipotent stem cells to neuronal lineage in forebrain(GO:0021898)
0.1	0.3	GO:0042776	mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.1	0.2	GO:2000777	positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia(GO:2000777)
0.0	0.3	GO:0048597	B cell selection(GO:0002339) post-embryonic camera-type eye morphogenesis(GO:0048597)
0.0	0.4	GO:0035879	plasma membrane lactate transport(GO:0035879)
0.0	0.1	GO:0060478	acrosomal vesicle exocytosis(GO:0060478)
0.0	0.1	GO:0051344	negative regulation of cyclic-nucleotide phosphodiesterase activity(GO:0051344)
0.0	0.4	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0	0.2	GO:0098912	membrane depolarization during Purkinje myocyte cell action potential(GO:0086047) membrane depolarization during atrial cardiac muscle cell action potential(GO:0098912)
0.0	0.1	GO:0030221	basophil differentiation(GO:0030221)
0.0	0.1	GO:0033132	negative regulation of glucokinase activity(GO:0033132) negative regulation of hexokinase activity(GO:1903300)
0.0	0.3	GO:0032571	response to vitamin K(GO:0032571)
0.0	0.1	GO:1901367	response to L-cysteine(GO:1901367)
0.0	0.5	GO:0046884	thyroid hormone generation(GO:0006590) follicle-stimulating hormone secretion(GO:0046884)
0.0	0.1	GO:1900738	positive regulation of phospholipase C-activating G-protein coupled receptor signaling pathway(GO:1900738)
0.0	0.1	GO:0061209	cell proliferation involved in mesonephros development(GO:0061209) mesenchymal cell proliferation involved in ureteric bud development(GO:0072138)
0.0	0.1	GO:0042985	negative regulation of amyloid precursor protein biosynthetic process(GO:0042985)
0.0	0.1	GO:0032914	positive regulation of transforming growth factor beta1 production(GO:0032914)
0.0	0.1	GO:0008582	regulation of synaptic growth at neuromuscular junction(GO:0008582)
0.0	0.1	GO:0001777	T cell homeostatic proliferation(GO:0001777) regulation of T cell homeostatic proliferation(GO:0046013)
0.0	0.1	GO:0006933	negative regulation of cell adhesion involved in substrate-bound cell migration(GO:0006933)
0.0	1.7	GO:0006342	chromatin silencing(GO:0006342)
0.0	0.1	GO:0021586	pons maturation(GO:0021586)
0.0	0.2	GO:1900017	positive regulation of cytokine production involved in inflammatory response(GO:1900017)
0.0	0.1	GO:0030200	heparan sulfate proteoglycan catabolic process(GO:0030200)
0.0	0.3	GO:0001976	neurological system process involved in regulation of systemic arterial blood pressure(GO:0001976)
0.0	0.0	GO:1902037	negative regulation of hematopoietic stem cell differentiation(GO:1902037)
0.0	0.1	GO:0046133	pyrimidine ribonucleoside catabolic process(GO:0046133)
0.0	0.0	GO:2000295	cadmium ion homeostasis(GO:0055073) regulation of lysosomal membrane permeability(GO:0097213) positive regulation of lysosomal membrane permeability(GO:0097214) regulation of hydrogen peroxide catabolic process(GO:2000295)
0.0	0.1	GO:0002536	respiratory burst involved in inflammatory response(GO:0002536)
0.0	0.1	GO:0031284	positive regulation of guanylate cyclase activity(GO:0031284)
0.0	0.1	GO:0033088	negative regulation of immature T cell proliferation in thymus(GO:0033088)
0.0	0.0	GO:0009249	protein lipoylation(GO:0009249)
0.0	0.2	GO:0051085	chaperone mediated protein folding requiring cofactor(GO:0051085)
0.0	0.0	GO:2000474	regulation of opioid receptor signaling pathway(GO:2000474)
0.0	0.0	GO:0042938	dipeptide transport(GO:0042938)
0.0	0.1	GO:0007191	adenylate cyclase-activating dopamine receptor signaling pathway(GO:0007191)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:1990907	beta-catenin-TCF complex(GO:1990907)
0.1	0.3	GO:1990584	cardiac Troponin complex(GO:1990584)
0.0	0.6	GO:0005751	mitochondrial respiratory chain complex IV(GO:0005751)
0.0	2.5	GO:0000786	nucleosome(GO:0000786)
0.0	0.3	GO:0005859	muscle myosin complex(GO:0005859)
0.0	0.1	GO:0016533	cyclin-dependent protein kinase 5 holoenzyme complex(GO:0016533)
0.0	0.3	GO:0001527	microfibril(GO:0001527) fibril(GO:0043205)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0030172	troponin C binding(GO:0030172)
0.0	0.4	GO:0015129	lactate transmembrane transporter activity(GO:0015129)
0.0	0.2	GO:0086062	voltage-gated sodium channel activity involved in Purkinje myocyte action potential(GO:0086062)
0.0	0.3	GO:0070016	armadillo repeat domain binding(GO:0070016)
0.0	0.1	GO:0003922	GMP synthase activity(GO:0003921) GMP synthase (glutamine-hydrolyzing) activity(GO:0003922)
0.0	0.1	GO:0033743	peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.0	0.2	GO:0030368	interleukin-17 receptor activity(GO:0030368)
0.0	0.3	GO:0030898	actin-dependent ATPase activity(GO:0030898)
0.0	0.1	GO:0030250	cyclase activator activity(GO:0010853) guanylate cyclase activator activity(GO:0030250)
0.0	0.6	GO:0015002	cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0	0.1	GO:0004111	creatine kinase activity(GO:0004111)
0.0	0.1	GO:0031545	peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0	0.1	GO:0008379	thioredoxin peroxidase activity(GO:0008379)
0.0	0.3	GO:0051400	BH domain binding(GO:0051400)
0.0	0.2	GO:0008097	5S rRNA binding(GO:0008097)
0.0	0.3	GO:0015035	protein disulfide oxidoreductase activity(GO:0015035)
0.0	0.4	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors(GO:0016667)
0.0	0.1	GO:0070052	collagen V binding(GO:0070052)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.4	PID RHODOPSIN PATHWAY	Visual signal transduction: Rods
0.0	0.3	SA PROGRAMMED CELL DEATH	Programmed cell death, or apoptosis, eliminates damaged or unneeded cells.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.4	REACTOME RNA POL I PROMOTER OPENING	Genes involved in RNA Polymerase I Promoter Opening
0.1	0.5	REACTOME GLYCOPROTEIN HORMONES	Genes involved in Glycoprotein hormones
0.0	0.4	REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS	Genes involved in Bile salt and organic anion SLC transporters
0.0	1.0	REACTOME RESPIRATORY ELECTRON TRANSPORT	Genes involved in Respiratory electron transport
0.0	0.2	REACTOME RAP1 SIGNALLING	Genes involved in Rap1 signalling