GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Nr1i2 Links NCBI RGD Ensembl	ENSRNOG00000002906	nuclear receptor subfamily 1, group I, member 2

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Nr1i2	rn6_v1_chr11_+_65022100_65022100	-0.69	2.0e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr10_-_58771908 Show fit	0.27	ENSRNOT00000018808	RGD1304728 Links NCBI RGD Ensembl Show fit	similar to 4933427D14Rik protein
chr8_-_84506328 Show fit	0.21	ENSRNOT00000064754	Mlip Links NCBI RGD Ensembl Show fit	muscular LMNA-interacting protein
chr9_-_14599594 Show fit	0.19	ENSRNOT00000018138	Treml1 Links NCBI RGD Ensembl Show fit	triggering receptor expressed on myeloid cells-like 1
chr8_+_26652121 Show fit	0.18	ENSRNOT00000009342	Eepd1 Links NCBI RGD Ensembl Show fit	endonuclease/exonuclease/phosphatase family domain containing 1
chrX_+_156873849 Show fit	0.18	ENSRNOT00000085410	Arhgap4 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 4
chr1_+_141767940 Show fit	0.18	ENSRNOT00000064034	Zfp710 Links NCBI RGD Ensembl Show fit	zinc finger protein 710
chr6_+_29518416 Show fit	0.16	ENSRNOT00000078660	AABR07063346.1 Links NCBI RGD Ensembl Show fit
chr13_-_111948753 Show fit	0.16	ENSRNOT00000048074	Hsd11b1 Links NCBI RGD Ensembl Show fit	hydroxysteroid 11-beta dehydrogenase 1
chr8_-_119889661 Show fit	0.15	ENSRNOT00000011780	Stac Links NCBI RGD Ensembl Show fit	SH3 and cysteine rich domain
chr1_+_166125474 Show fit	0.15	ENSRNOT00000091822	Fchsd2 Links NCBI RGD Ensembl Show fit	FCH and double SH3 domains 2
chr17_+_9236249 Show fit	0.14	ENSRNOT00000015878	Tifab Links NCBI RGD Ensembl Show fit	TIFA inhibitor
chr13_-_86671515 Show fit	0.14	ENSRNOT00000082869	AABR07021704.1 Links NCBI RGD Ensembl Show fit
chr20_+_28572242 Show fit	0.14	ENSRNOT00000072485	Sh3rf3 Links NCBI RGD Ensembl Show fit	SH3 domain containing ring finger 3
chr5_-_147635789 Show fit	0.13	ENSRNOT00000037106	Zbtb8b Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 8b
chr1_-_90520344 Show fit	0.13	ENSRNOT00000078598	Kctd15 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 15
chr2_-_207300854 Show fit	0.12	ENSRNOT00000018061	Mov10 Links NCBI RGD Ensembl Show fit	Mov10 RISC complex RNA helicase
chr4_-_169999873 Show fit	0.12	ENSRNOT00000011697	Grin2b Links NCBI RGD Ensembl Show fit	glutamate ionotropic receptor NMDA type subunit 2B
chr2_+_189714754 Show fit	0.12	ENSRNOT00000086285	Gatad2b Links NCBI RGD Ensembl Show fit	GATA zinc finger domain containing 2B
chr6_+_112203679 Show fit	0.12	ENSRNOT00000031205	Nrxn3 Links NCBI RGD Ensembl Show fit	neurexin 3
chr7_-_2961873 Show fit	0.12	ENSRNOT00000067441	Rps15-ps2 Links NCBI RGD Ensembl Show fit	ribosomal protein S15, pseudogene 2
chr2_+_235596907 Show fit	0.12	ENSRNOT00000071463 ENSRNOT00000075728	Col25a1 Links NCBI RGD Ensembl Show fit	collagen type XXV alpha 1 chain
chr11_+_82848853 Show fit	0.12	ENSRNOT00000073743	Thpo Links NCBI RGD Ensembl Show fit	thrombopoietin
chr2_-_247988462 Show fit	0.12	ENSRNOT00000022387	Pdlim5 Links NCBI RGD Ensembl Show fit	PDZ and LIM domain 5
chrX_-_106607352 Show fit	0.11	ENSRNOT00000082858	AABR07040624.1 Links NCBI RGD Ensembl Show fit
chr10_-_36419926 Show fit	0.11	ENSRNOT00000004902	Znf354b Links NCBI RGD Ensembl Show fit	zinc finger protein 354B
chr1_-_167911961 Show fit	0.11	ENSRNOT00000025097	Olr59 Links NCBI RGD Ensembl Show fit	olfactory receptor 59
chr3_+_58632476 Show fit	0.11	ENSRNOT00000010630	Rapgef4 Links NCBI RGD Ensembl Show fit	Rap guanine nucleotide exchange factor 4
chr12_-_39396042 Show fit	0.11	ENSRNOT00000001746	P2rx7 Links NCBI RGD Ensembl Show fit	purinergic receptor P2X 7
chr7_+_34533543 Show fit	0.10	ENSRNOT00000007412 ENSRNOT00000084185	Ntn4 Links NCBI RGD Ensembl Show fit	netrin 4
chr4_-_155563249 Show fit	0.10	ENSRNOT00000011298	Slc2a3 Links NCBI RGD Ensembl Show fit	solute carrier family 2 member 3
chr10_+_86795787 Show fit	0.10	ENSRNOT00000029021	Wipf2 Links NCBI RGD Ensembl Show fit	WAS/WASL interacting protein family, member 2
chr10_-_64642292 Show fit	0.10	ENSRNOT00000084670	Abr Links NCBI RGD Ensembl Show fit	active BCR-related
chr4_-_27473150 Show fit	0.10	ENSRNOT00000032505	Krit1 Links NCBI RGD Ensembl Show fit	KRIT1, ankyrin repeat containing
chr2_+_234375315 Show fit	0.10	ENSRNOT00000071270	LOC102549542 Links NCBI RGD Ensembl Show fit	elongation of very long chain fatty acids protein 6-like
chr17_+_49417067 Show fit	0.10	ENSRNOT00000090024	Pou6f2 Links NCBI RGD Ensembl Show fit	POU domain, class 6, transcription factor 2
chr7_+_2529077 Show fit	0.09	ENSRNOT00000079383	Baz2a Links NCBI RGD Ensembl Show fit	bromodomain adjacent to zinc finger domain, 2A
chr13_-_105140473 Show fit	0.09	ENSRNOT00000087023	Tgfb2 Links NCBI RGD Ensembl Show fit	transforming growth factor, beta 2
chr18_+_30913842 Show fit	0.09	ENSRNOT00000026947	Pcdhgc3 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily C, 3
chr7_-_143966863 Show fit	0.09	ENSRNOT00000018828	Sp7 Links NCBI RGD Ensembl Show fit	Sp7 transcription factor
chr6_-_114476723 Show fit	0.09	ENSRNOT00000005162	Dio2 Links NCBI RGD Ensembl Show fit	deiodinase, iodothyronine, type II
chrX_-_70428364 Show fit	0.09	ENSRNOT00000045907	P2ry4 Links NCBI RGD Ensembl Show fit	pyrimidinergic receptor P2Y4
chr2_-_231521052 Show fit	0.09	ENSRNOT00000089534 ENSRNOT00000080470 ENSRNOT00000084756	Ank2 Links NCBI RGD Ensembl Show fit	ankyrin 2
chr5_-_136098013 Show fit	0.09	ENSRNOT00000089166	RGD1563714 Links NCBI RGD Ensembl Show fit	RGD1563714
chr11_+_69484293 Show fit	0.09	ENSRNOT00000049292	Kalrn Links NCBI RGD Ensembl Show fit	kalirin, RhoGEF kinase
chr5_+_140712583 Show fit	0.09	ENSRNOT00000019587	Trit1 Links NCBI RGD Ensembl Show fit	tRNA isopentenyltransferase 1
chr3_+_80556668 Show fit	0.09	ENSRNOT00000079118	Arhgap1 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 1
chr14_+_86652365 Show fit	0.09	ENSRNOT00000077428	Zmiz2 Links NCBI RGD Ensembl Show fit	zinc finger, MIZ-type containing 2
chr10_+_36715565 Show fit	0.09	ENSRNOT00000005048	Clk4 Links NCBI RGD Ensembl Show fit	CDC-like kinase 4
chr1_+_256382791 Show fit	0.09	ENSRNOT00000022549	Cyp26a1 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 26, subfamily a, polypeptide 1
chrX_+_111735820 Show fit	0.09	ENSRNOT00000086948	Frmpd3 Links NCBI RGD Ensembl Show fit	FERM and PDZ domain containing 3
chr16_-_15798974 Show fit	0.09	ENSRNOT00000046842 ENSRNOT00000065946	Nrg3 Links NCBI RGD Ensembl Show fit	neuregulin 3
chr7_+_72985495 Show fit	0.09	ENSRNOT00000008361	Matn2 Links NCBI RGD Ensembl Show fit	matrilin 2
chr7_-_123621102 Show fit	0.09	ENSRNOT00000046024	Cyp2d5 Links NCBI RGD Ensembl Show fit	cytochrome P450, family 2, subfamily d, polypeptide 5
chr13_-_103080920 Show fit	0.09	ENSRNOT00000034990	AABR07022022.1 Links NCBI RGD Ensembl Show fit
chr1_-_222350173 Show fit	0.09	ENSRNOT00000030625	Flrt1 Links NCBI RGD Ensembl Show fit	fibronectin leucine rich transmembrane protein 1
chr2_-_200003443 Show fit	0.09	ENSRNOT00000024900 ENSRNOT00000088041	Pde4dip Links NCBI RGD Ensembl Show fit	phosphodiesterase 4D interacting protein
chr17_+_22620721 Show fit	0.09	ENSRNOT00000019478	Adtrp Links NCBI RGD Ensembl Show fit	androgen-dependent TFPI-regulating protein
chr1_-_167700332 Show fit	0.09	ENSRNOT00000092890	Trim21 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 21
chr3_-_48372583 Show fit	0.09	ENSRNOT00000040482 ENSRNOT00000077788 ENSRNOT00000085426	Dpp4 Links NCBI RGD Ensembl Show fit	dipeptidylpeptidase 4
chr4_+_174692331 Show fit	0.09	ENSRNOT00000011770	Plekha5 Links NCBI RGD Ensembl Show fit	pleckstrin homology domain containing A5
chr16_+_39909270 Show fit	0.09	ENSRNOT00000081994	Wdr17 Links NCBI RGD Ensembl Show fit	WD repeat domain 17
chr19_+_10563423 Show fit	0.09	ENSRNOT00000021037	Dok4 Links NCBI RGD Ensembl Show fit	docking protein 4
chr5_-_79222687 Show fit	0.08	ENSRNOT00000010516	Akna Links NCBI RGD Ensembl Show fit	AT-hook transcription factor
chr2_-_62634785 Show fit	0.08	ENSRNOT00000017937	Pdzd2 Links NCBI RGD Ensembl Show fit	PDZ domain containing 2
chr10_-_54467956 Show fit	0.08	ENSRNOT00000065383	Usp43 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 43
chr11_+_61661310 Show fit	0.08	ENSRNOT00000093325	Zdhhc23 Links NCBI RGD Ensembl Show fit	zinc finger, DHHC-type containing 23
chr3_-_39596718 Show fit	0.08	ENSRNOT00000006784	Rprm Links NCBI RGD Ensembl Show fit	reprimo, TP53 dependent G2 arrest mediator candidate
chr8_+_115546712 Show fit	0.08	ENSRNOT00000079801	Dcaf1 Links NCBI RGD Ensembl Show fit	DDB1 and CUL4 associated factor 1
chr8_-_78655856 Show fit	0.08	ENSRNOT00000081185	Tcf12 Links NCBI RGD Ensembl Show fit	transcription factor 12
chr9_-_93404883 Show fit	0.08	ENSRNOT00000025024	Nmur1 Links NCBI RGD Ensembl Show fit	neuromedin U receptor 1
chr1_+_214562897 Show fit	0.08	ENSRNOT00000085125	Ap2a2 Links NCBI RGD Ensembl Show fit	adaptor-related protein complex 2, alpha 2 subunit
chr9_+_12114977 Show fit	0.08	ENSRNOT00000073673	AABR07066648.1 Links NCBI RGD Ensembl Show fit
chr5_-_57632177 Show fit	0.08	ENSRNOT00000080787 ENSRNOT00000092581	Ubap2 Links NCBI RGD Ensembl Show fit	ubiquitin-associated protein 2
chr11_+_61531416 Show fit	0.08	ENSRNOT00000093263	Atp6v1a Links NCBI RGD Ensembl Show fit	ATPase H+ transporting V1 subunit A
chr10_+_57218087 Show fit	0.08	ENSRNOT00000089853	Mink1 Links NCBI RGD Ensembl Show fit	misshapen-like kinase 1
chr2_-_22798214 Show fit	0.08	ENSRNOT00000016135	Papd4 Links NCBI RGD Ensembl Show fit	poly(A) RNA polymerase D4, non-canonical
chr20_-_8202924 Show fit	0.08	ENSRNOT00000071399	Tmem217 Links NCBI RGD Ensembl Show fit	transmembrane protein 217
chr11_-_62451149 Show fit	0.08	ENSRNOT00000093686 ENSRNOT00000081443	Zbtb20 Links NCBI RGD Ensembl Show fit	zinc finger and BTB domain containing 20
chr10_+_15183803 Show fit	0.07	ENSRNOT00000039777	Fbxl16 Links NCBI RGD Ensembl Show fit	F-box and leucine-rich repeat protein 16
chr1_+_66898946 Show fit	0.07	ENSRNOT00000074063	Zfp551 Links NCBI RGD Ensembl Show fit	zinc finger protein 551
chr9_+_118586179 Show fit	0.07	ENSRNOT00000022351	Dlgap1 Links NCBI RGD Ensembl Show fit	DLG associated protein 1
chr2_-_39003552 Show fit	0.07	ENSRNOT00000078884	Zswim6 Links NCBI RGD Ensembl Show fit	zinc finger, SWIM-type containing 6
chr10_-_70802782 Show fit	0.07	ENSRNOT00000045867	Ccl6 Links NCBI RGD Ensembl Show fit	chemokine (C-C motif) ligand 6
chr2_+_45668969 Show fit	0.07	ENSRNOT00000014761 ENSRNOT00000071353	Arl15 Links NCBI RGD Ensembl Show fit	ADP-ribosylation factor like GTPase 15
chr16_-_3139177 Show fit	0.07	ENSRNOT00000039311	Ccdc66 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 66
chr13_-_88642011 Show fit	0.07	ENSRNOT00000067037	LOC100361087 Links NCBI RGD Ensembl Show fit	hypothetical LOC100361087
chr4_-_119591817 Show fit	0.07	ENSRNOT00000048768	AC097129.1 Links NCBI RGD Ensembl Show fit
chr4_-_161681660 Show fit	0.07	ENSRNOT00000039086	Rhno1 Links NCBI RGD Ensembl Show fit	RAD9-HUS1-RAD1 interacting nuclear orphan 1
chrX_+_88298266 Show fit	0.07	ENSRNOT00000041508	AABR07039936.1 Links NCBI RGD Ensembl Show fit
chr14_-_3359300 Show fit	0.07	ENSRNOT00000080875	Lpcat2b Links NCBI RGD Ensembl Show fit	lysophosphatidylcholine acyltransferase 2b
chr5_-_147412705 Show fit	0.07	ENSRNOT00000010688	RGD1561149 Links NCBI RGD Ensembl Show fit	similar to mKIAA1522 protein
chr8_+_71167305 Show fit	0.07	ENSRNOT00000021337	Rbpms2 Links NCBI RGD Ensembl Show fit	RNA binding protein with multiple splicing 2
chr12_-_2555164 Show fit	0.07	ENSRNOT00000084460 ENSRNOT00000061821	Map2k7 Links NCBI RGD Ensembl Show fit	mitogen activated protein kinase kinase 7
chr9_+_2202511 Show fit	0.07	ENSRNOT00000017556	Satb1 Links NCBI RGD Ensembl Show fit	SATB homeobox 1
chr17_-_18590536 Show fit	0.07	ENSRNOT00000078992	Cap2 Links NCBI RGD Ensembl Show fit	CAP, adenylate cyclase-associated protein, 2 (yeast)
chr16_-_70705128 Show fit	0.07	ENSRNOT00000071258	Rnf170 Links NCBI RGD Ensembl Show fit	ring finger protein 170
chr19_+_21218465 Show fit	0.07	ENSRNOT00000049285	N4bp1 Links NCBI RGD Ensembl Show fit	Nedd4 binding protein 1
chr1_-_266074181 Show fit	0.07	ENSRNOT00000026378	Psd Links NCBI RGD Ensembl Show fit	pleckstrin and Sec7 domain containing
chr3_+_138398011 Show fit	0.07	ENSRNOT00000038865	Mgme1 Links NCBI RGD Ensembl Show fit	mitochondrial genome maintenance exonuclease 1
chr12_-_46889082 Show fit	0.07	ENSRNOT00000001525	Pla2g1b Links NCBI RGD Ensembl Show fit	phospholipase A2 group IB
chr2_-_234296145 Show fit	0.07	ENSRNOT00000014155	Elovl6 Links NCBI RGD Ensembl Show fit	ELOVL fatty acid elongase 6
chr7_-_140502441 Show fit	0.07	ENSRNOT00000089544	Kmt2d Links NCBI RGD Ensembl Show fit	lysine methyltransferase 2D
chr8_-_130338325 Show fit	0.07	ENSRNOT00000071697	Sec22c Links NCBI RGD Ensembl Show fit	SEC22 homolog C, vesicle trafficking protein
chr1_-_13915594 Show fit	0.07	ENSRNOT00000015927	Arfgef3 Links NCBI RGD Ensembl Show fit	ARFGEF family member 3
chr12_-_37398329 Show fit	0.07	ENSRNOT00000083401	Tctn2 Links NCBI RGD Ensembl Show fit	tectonic family member 2
chr1_-_191651628 Show fit	0.07	ENSRNOT00000055048	Usp31 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 31
chr7_+_127964752 Show fit	0.06	ENSRNOT00000038168	RGD1560617 Links NCBI RGD Ensembl Show fit	hypothetical gene supported by NM_053561; AF062594
chr18_-_62614725 Show fit	0.06	ENSRNOT00000025223	Mc4r Links NCBI RGD Ensembl Show fit	melanocortin 4 receptor
chr12_+_45727112 Show fit	0.06	ENSRNOT00000001507	Srrm4 Links NCBI RGD Ensembl Show fit	serine/arginine repetitive matrix 4
chr3_+_161272385 Show fit	0.06	ENSRNOT00000021052	Zswim3 Links NCBI RGD Ensembl Show fit	zinc finger, SWIM-type containing 3
chr9_+_82718709 Show fit	0.06	ENSRNOT00000027256 ENSRNOT00000080524	Stk11ip Links NCBI RGD Ensembl Show fit	serine/threonine kinase 11 interacting protein
chr15_+_37171052 Show fit	0.06	ENSRNOT00000011684	Zmym2 Links NCBI RGD Ensembl Show fit	zinc finger MYM-type containing 2
chr7_-_70577147 Show fit	0.06	ENSRNOT00000008854	Mbd6 Links NCBI RGD Ensembl Show fit	methyl-CpG binding domain protein 6
chr1_-_90520012 Show fit	0.06	ENSRNOT00000028698	Kctd15 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 15
chr12_-_22245100 Show fit	0.06	ENSRNOT00000001912	Gigyf1 Links NCBI RGD Ensembl Show fit	GRB10 interacting GYF protein 1
chr14_+_1355004 Show fit	0.06	ENSRNOT00000043131	AABR07014114.1 Links NCBI RGD Ensembl Show fit
chr4_+_170518673 Show fit	0.06	ENSRNOT00000011803	Atf7ip Links NCBI RGD Ensembl Show fit	activating transcription factor 7 interacting protein
chr10_+_39875371 Show fit	0.06	ENSRNOT00000013481	Rapgef6 Links NCBI RGD Ensembl Show fit	Rap guanine nucleotide exchange factor 6
chr1_+_104635989 Show fit	0.06	ENSRNOT00000078477	Nav2 Links NCBI RGD Ensembl Show fit	neuron navigator 2
chr11_-_70833577 Show fit	0.06	ENSRNOT00000002428	Osbpl11 Links NCBI RGD Ensembl Show fit	oxysterol binding protein-like 11
chr17_-_80320681 Show fit	0.06	ENSRNOT00000023637	C1ql3 Links NCBI RGD Ensembl Show fit	complement C1q like 3
chr1_+_85162452 Show fit	0.06	ENSRNOT00000093347	Pak4 Links NCBI RGD Ensembl Show fit	p21 (RAC1) activated kinase 4
chr7_+_110031696 Show fit	0.06	ENSRNOT00000012753	Khdrbs3 Links NCBI RGD Ensembl Show fit	KH RNA binding domain containing, signal transduction associated 3
chr13_-_48286720 Show fit	0.06	ENSRNOT00000008976	Srgap2 Links NCBI RGD Ensembl Show fit	SLIT-ROBO Rho GTPase activating protein 2
chr13_-_39643361 Show fit	0.06	ENSRNOT00000003527	Dpp10 Links NCBI RGD Ensembl Show fit	dipeptidylpeptidase 10
chr7_+_11490852 Show fit	0.06	ENSRNOT00000044484	Creb3l3 Links NCBI RGD Ensembl Show fit	cAMP responsive element binding protein 3-like 3
chr5_+_150754021 Show fit	0.06	ENSRNOT00000017687	Ptafr Links NCBI RGD Ensembl Show fit	platelet-activating factor receptor
chr18_+_60496778 Show fit	0.06	ENSRNOT00000088624	Nedd4l Links NCBI RGD Ensembl Show fit	neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
chr9_+_81783349 Show fit	0.06	ENSRNOT00000021548	Cnot9 Links NCBI RGD Ensembl Show fit	CCR4-NOT transcription complex subunit 9
chr20_-_12820466 Show fit	0.06	ENSRNOT00000001699	Ftcd Links NCBI RGD Ensembl Show fit	formimidoyltransferase cyclodeaminase
chr3_+_103773459 Show fit	0.06	ENSRNOT00000079727	Slc12a6 Links NCBI RGD Ensembl Show fit	solute carrier family 12, member 6
chr9_+_18564927 Show fit	0.06	ENSRNOT00000061014	Runx2 Links NCBI RGD Ensembl Show fit	runt-related transcription factor 2
chr11_+_61321459 Show fit	0.06	ENSRNOT00000002759	Sidt1 Links NCBI RGD Ensembl Show fit	SID1 transmembrane family, member 1
chr4_+_158224000 Show fit	0.06	ENSRNOT00000084240 ENSRNOT00000078495	Ano2 Links NCBI RGD Ensembl Show fit	anoctamin 2
chr13_-_105141030 Show fit	0.06	ENSRNOT00000003313	Tgfb2 Links NCBI RGD Ensembl Show fit	transforming growth factor, beta 2
chr2_+_187893875 Show fit	0.05	ENSRNOT00000093014	Mex3a Links NCBI RGD Ensembl Show fit	mex-3 RNA binding family member A
chr3_+_59819157 Show fit	0.05	ENSRNOT00000040114	LOC103695172 Links NCBI RGD Ensembl Show fit	uncharacterized LOC103695172
chr1_-_277355075 Show fit	0.05	ENSRNOT00000036321	Dclre1a Links NCBI RGD Ensembl Show fit	DNA cross-link repair 1A
chr18_+_30904498 Show fit	0.05	ENSRNOT00000026969	Pcdhga11 Links NCBI RGD Ensembl Show fit	protocadherin gamma subfamily A, 11
chr3_-_13525983 Show fit	0.05	ENSRNOT00000082036	Pbx3 Links NCBI RGD Ensembl Show fit	PBX homeobox 3
chr3_+_63379031 Show fit	0.05	ENSRNOT00000068199	Osbpl6 Links NCBI RGD Ensembl Show fit	oxysterol binding protein-like 6
chr8_+_50525091 Show fit	0.05	ENSRNOT00000074357	Apoa1 Links NCBI RGD Ensembl Show fit	apolipoprotein A1
chr7_-_84023316 Show fit	0.05	ENSRNOT00000005556	Kcnv1 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel modifier subfamily V member 1
chr19_-_56772904 Show fit	0.05	ENSRNOT00000024232	Abcb10 Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily B member 10
chr17_-_44640092 Show fit	0.05	ENSRNOT00000077628	Zfp184 Links NCBI RGD Ensembl Show fit	zinc finger protein 184
chr4_+_96562725 Show fit	0.05	ENSRNOT00000009094	Ndnf Links NCBI RGD Ensembl Show fit	neuron-derived neurotrophic factor
chr1_-_37726151 Show fit	0.05	ENSRNOT00000071842	RGD1308544 Links NCBI RGD Ensembl Show fit	LOC361192
chr19_-_22281778 Show fit	0.05	ENSRNOT00000049624	Phkb Links NCBI RGD Ensembl Show fit	phosphorylase kinase regulatory subunit beta
chr1_-_88112683 Show fit	0.05	ENSRNOT00000090615	Spred3 Links NCBI RGD Ensembl Show fit	sprouty-related, EVH1 domain containing 3
chr18_+_59748444 Show fit	0.05	ENSRNOT00000024752	St8sia3 Links NCBI RGD Ensembl Show fit	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
chr7_-_120770435 Show fit	0.05	ENSRNOT00000077000	Ddx17 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 17
chrX_+_124321551 Show fit	0.05	ENSRNOT00000074486	LOC100910807 Links NCBI RGD Ensembl Show fit	transcriptional regulator Kaiso-like
chr4_+_113101100 Show fit	0.05	ENSRNOT00000084897	AABR07061261.1 Links NCBI RGD Ensembl Show fit
chr7_+_27620458 Show fit	0.05	ENSRNOT00000059532	RGD1560034 Links NCBI RGD Ensembl Show fit	similar to FLJ25323 protein
chr4_-_150471806 Show fit	0.05	ENSRNOT00000008741 ENSRNOT00000076557	Bms1 Links NCBI RGD Ensembl Show fit	BMS1 ribosome biogenesis factor
chr14_-_114649173 Show fit	0.05	ENSRNOT00000083528	Sptbn1 Links NCBI RGD Ensembl Show fit	spectrin, beta, non-erythrocytic 1
chr7_+_15422479 Show fit	0.05	ENSRNOT00000066520	Zfp563 Links NCBI RGD Ensembl Show fit	zinc finger protein 563
chr1_+_197839430 Show fit	0.05	ENSRNOT00000025043	Rabep2 Links NCBI RGD Ensembl Show fit	rabaptin, RAB GTPase binding effector protein 2
chr17_-_52569036 Show fit	0.05	ENSRNOT00000019396	Gli3 Links NCBI RGD Ensembl Show fit	GLI family zinc finger 3
chr9_+_10471742 Show fit	0.05	ENSRNOT00000072276	Safb2 Links NCBI RGD Ensembl Show fit	scaffold attachment factor B2
chrX_+_35869538 Show fit	0.05	ENSRNOT00000058947	Ppef1 Links NCBI RGD Ensembl Show fit	protein phosphatase with EF-hand domain 1
chr7_-_104749552 Show fit	0.05	ENSRNOT00000079981	Asap1 Links NCBI RGD Ensembl Show fit	ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
chr3_+_54253949 Show fit	0.05	ENSRNOT00000010018	B3galt1 Links NCBI RGD Ensembl Show fit	Beta-1,3-galactosyltransferase 1
chr1_+_219144205 Show fit	0.05	ENSRNOT00000083942	Unc93b1 Links NCBI RGD Ensembl Show fit	unc-93 homolog B1 (C. elegans)
chr1_-_85317968 Show fit	0.05	ENSRNOT00000026891	Gmfg Links NCBI RGD Ensembl Show fit	glia maturation factor, gamma
chr18_-_56325095 Show fit	0.05	ENSRNOT00000025209	Slc6a7 Links NCBI RGD Ensembl Show fit	solute carrier family 6 member 7
chr11_+_57430166 Show fit	0.05	ENSRNOT00000093201	Phldb2 Links NCBI RGD Ensembl Show fit	pleckstrin homology-like domain, family B, member 2
chr6_+_73358112 Show fit	0.05	ENSRNOT00000041373	Arhgap5 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 5
chr12_-_36398206 Show fit	0.05	ENSRNOT00000090944 ENSRNOT00000058492	Tmem132b Links NCBI RGD Ensembl Show fit	transmembrane protein 132B
chr8_+_58120179 Show fit	0.05	ENSRNOT00000049076 ENSRNOT00000090114	Npat Links NCBI RGD Ensembl Show fit	nuclear protein, co-activator of histone transcription
chr5_-_57607725 Show fit	0.05	ENSRNOT00000080295	Ubap2 Links NCBI RGD Ensembl Show fit	ubiquitin-associated protein 2
chr2_-_22744407 Show fit	0.05	ENSRNOT00000073710	Cmya5 Links NCBI RGD Ensembl Show fit	cardiomyopathy associated 5
chr5_+_172881813 Show fit	0.05	ENSRNOT00000067227	AC130035.1 Links NCBI RGD Ensembl Show fit
chr8_+_71168097 Show fit	0.05	ENSRNOT00000081375	Rbpms2 Links NCBI RGD Ensembl Show fit	RNA binding protein with multiple splicing 2
chr13_+_110920830 Show fit	0.05	ENSRNOT00000077014 ENSRNOT00000076362	Kcnh1 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily H member 1
chr2_-_195678848 Show fit	0.05	ENSRNOT00000028303 ENSRNOT00000075569	Oaz3 Links NCBI RGD Ensembl Show fit	ornithine decarboxylase antizyme 3
chr11_-_87158597 Show fit	0.05	ENSRNOT00000002517	Vpreb2 Links NCBI RGD Ensembl Show fit	pre-B lymphocyte gene 2
chr1_+_256226179 Show fit	0.05	ENSRNOT00000054748	Exoc6 Links NCBI RGD Ensembl Show fit	exocyst complex component 6
chr9_-_70787913 Show fit	0.05	ENSRNOT00000072007 ENSRNOT00000017901	Klf7 Links NCBI RGD Ensembl Show fit Klf7 Links NCBI RGD Ensembl Show fit	Kruppel like factor 7 Kruppel like factor 7
chr1_+_7252349 Show fit	0.05	ENSRNOT00000030329	Plagl1 Links NCBI RGD Ensembl Show fit	PLAG1 like zinc finger 1
chrX_-_142248369 Show fit	0.05	ENSRNOT00000091330	Fgf13 Links NCBI RGD Ensembl Show fit	fibroblast growth factor 13
chr4_-_150829741 Show fit	0.05	ENSRNOT00000051846 ENSRNOT00000052017	Cacna1c Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel subunit alpha1 C
chr6_-_61405195 Show fit	0.04	ENSRNOT00000008655	Lrrn3 Links NCBI RGD Ensembl Show fit	leucine rich repeat neuronal 3
chr1_+_85192174 Show fit	0.04	ENSRNOT00000026966	Pak4 Links NCBI RGD Ensembl Show fit	p21 (RAC1) activated kinase 4
chr4_+_123801174 Show fit	0.04	ENSRNOT00000029055	RGD1560289 Links NCBI RGD Ensembl Show fit	similar to chromosome 3 open reading frame 20
chr2_-_199354793 Show fit	0.04	ENSRNOT00000023548	Bcl9 Links NCBI RGD Ensembl Show fit	B-cell CLL/lymphoma 9
chr3_+_33440191 Show fit	0.04	ENSRNOT00000034632 ENSRNOT00000092907	Mbd5 Links NCBI RGD Ensembl Show fit	methyl-CpG binding domain protein 5
chr14_+_42015347 Show fit	0.04	ENSRNOT00000044017	Atp8a1 Links NCBI RGD Ensembl Show fit	ATPase phospholipid transporting 8A1
chr5_+_123905166 Show fit	0.04	ENSRNOT00000082021	Dab1 Links NCBI RGD Ensembl Show fit	DAB1, reelin adaptor protein
chr4_+_157659147 Show fit	0.04	ENSRNOT00000048379	Iffo1 Links NCBI RGD Ensembl Show fit	intermediate filament family orphan 1
chr4_-_119131202 Show fit	0.04	ENSRNOT00000011675	Antxr1 Links NCBI RGD Ensembl Show fit	anthrax toxin receptor 1
chr12_-_24537313 Show fit	0.04	ENSRNOT00000001975	Baz1b Links NCBI RGD Ensembl Show fit	bromodomain adjacent to zinc finger domain, 1B
chr8_-_47339343 Show fit	0.04	ENSRNOT00000081007	Arhgef12 Links NCBI RGD Ensembl Show fit	Rho guanine nucleotide exchange factor 12
chr20_-_3374344 Show fit	0.04	ENSRNOT00000082999	Ppp1r18 Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 18
chr5_+_148200370 Show fit	0.04	ENSRNOT00000064948	Adgrb2 Links NCBI RGD Ensembl Show fit	adhesion G protein-coupled receptor B2
chr3_+_71114100 Show fit	0.04	ENSRNOT00000088549 ENSRNOT00000006961	Itgav Links NCBI RGD Ensembl Show fit	integrin subunit alpha V
chr9_-_10471009 Show fit	0.04	ENSRNOT00000072868	Safb Links NCBI RGD Ensembl Show fit	scaffold attachment factor B
chr3_+_80676820 Show fit	0.04	ENSRNOT00000084809	Ambra1 Links NCBI RGD Ensembl Show fit	autophagy and beclin 1 regulator 1
chr1_+_227757425 Show fit	0.04	ENSRNOT00000032937 ENSRNOT00000049574	Ms4a6bl Links NCBI RGD Ensembl Show fit	membrane-spanning 4-domains, subfamily A, member 6B-like
chr1_+_48433079 Show fit	0.04	ENSRNOT00000037369	Slc22a3 Links NCBI RGD Ensembl Show fit	solute carrier family 22 member 3

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0006713	glucocorticoid catabolic process(GO:0006713)
0.0	0.1	GO:1905006	positive regulation of activation-induced cell death of T cells(GO:0070237) negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation(GO:1905006)
0.0	0.1	GO:0007356	thorax and anterior abdomen determination(GO:0007356)
0.0	0.2	GO:0098989	NMDA selective glutamate receptor signaling pathway(GO:0098989)
0.0	0.1	GO:0038163	thrombopoietin-mediated signaling pathway(GO:0038163)
0.0	0.1	GO:1900135	positive regulation of renin secretion into blood stream(GO:1900135)
0.0	0.1	GO:1904457	positive regulation of neuronal action potential(GO:1904457)
0.0	0.1	GO:0043132	phospholipid transfer to membrane(GO:0006649) NAD transport(GO:0043132) regulation of bleb assembly(GO:1904170)
0.0	0.1	GO:0043314	negative regulation of neutrophil degranulation(GO:0043314)
0.0	0.1	GO:0061744	motor behavior(GO:0061744)
0.0	0.1	GO:1990164	histone H2A phosphorylation(GO:1990164)
0.0	0.1	GO:0098795	mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795)
0.0	0.1	GO:0060060	post-embryonic retina morphogenesis in camera-type eye(GO:0060060)
0.0	0.2	GO:0034625	fatty acid elongation, monounsaturated fatty acid(GO:0034625)
0.0	0.1	GO:0036371	protein localization to M-band(GO:0036309) protein localization to T-tubule(GO:0036371)
0.0	0.1	GO:0034653	diterpenoid catabolic process(GO:0016103) retinoic acid catabolic process(GO:0034653)
0.0	0.1	GO:0021840	directional guidance of interneurons involved in migration from the subpallium to the cortex(GO:0021840) chemorepulsion involved in interneuron migration from the subpallium to the cortex(GO:0021842)
0.0	0.2	GO:0010764	negative regulation of fibroblast migration(GO:0010764)
0.0	0.1	GO:0003363	lamellipodium assembly involved in ameboidal cell migration(GO:0003363) extension of a leading process involved in cell motility in cerebral cortex radial glia guided migration(GO:0021816)
0.0	0.0	GO:0061366	behavioral response to chemical pain(GO:0061366) behavioral response to formalin induced pain(GO:0061368)
0.0	0.1	GO:0043313	regulation of neutrophil degranulation(GO:0043313)
0.0	0.1	GO:0019556	formate metabolic process(GO:0015942) histidine catabolic process to glutamate and formamide(GO:0019556) formamide metabolic process(GO:0043606)
0.0	0.1	GO:0071477	hypotonic salinity response(GO:0042539) cellular hypotonic salinity response(GO:0071477)
0.0	0.1	GO:0010903	negative regulation of very-low-density lipoprotein particle remodeling(GO:0010903)
0.0	0.1	GO:1903336	negative regulation of vacuolar transport(GO:1903336)
0.0	0.1	GO:0072709	cellular response to sorbitol(GO:0072709)
0.0	0.1	GO:1990743	protein sialylation(GO:1990743)
0.0	0.1	GO:0035426	extracellular matrix-cell signaling(GO:0035426)
0.0	0.1	GO:0060364	frontal suture morphogenesis(GO:0060364)
0.0	0.0	GO:1901726	negative regulation of histone deacetylase activity(GO:1901726)
0.0	0.0	GO:1902268	negative regulation of polyamine transmembrane transport(GO:1902268)
0.0	0.1	GO:0021564	vagus nerve development(GO:0021564)
0.0	0.0	GO:0014908	myotube differentiation involved in skeletal muscle regeneration(GO:0014908)
0.0	0.0	GO:0060399	positive regulation of growth hormone receptor signaling pathway(GO:0060399)
0.0	0.0	GO:0061092	regulation of phospholipid translocation(GO:0061091) positive regulation of phospholipid translocation(GO:0061092)
0.0	0.1	GO:0070318	positive regulation of G0 to G1 transition(GO:0070318)
0.0	0.1	GO:0034316	negative regulation of Arp2/3 complex-mediated actin nucleation(GO:0034316)
0.0	0.0	GO:0021812	hindbrain structural organization(GO:0021577) cerebellum structural organization(GO:0021589) neuronal-glial interaction involved in cerebral cortex radial glia guided migration(GO:0021812)
0.0	0.1	GO:2001288	positive regulation of caveolin-mediated endocytosis(GO:2001288)
0.0	0.1	GO:0098912	membrane depolarization during atrial cardiac muscle cell action potential(GO:0098912)
0.0	0.1	GO:0016479	negative regulation of transcription from RNA polymerase I promoter(GO:0016479)
0.0	0.1	GO:0060486	Clara cell differentiation(GO:0060486)
0.0	0.1	GO:0070842	aggresome assembly(GO:0070842)
0.0	0.1	GO:0060385	axonogenesis involved in innervation(GO:0060385)
0.0	0.0	GO:1902269	positive regulation of polyamine transmembrane transport(GO:1902269)
0.0	0.0	GO:2000295	regulation of hydrogen peroxide catabolic process(GO:2000295) regulation of peroxidase activity(GO:2000468)
0.0	0.0	GO:0045082	positive regulation of interleukin-10 biosynthetic process(GO:0045082)
0.0	0.1	GO:0001555	oocyte growth(GO:0001555)
0.0	0.0	GO:0060672	epithelial cell differentiation involved in embryonic placenta development(GO:0060671) epithelial cell morphogenesis involved in placental branching(GO:0060672)
0.0	0.0	GO:0032510	endosome to lysosome transport via multivesicular body sorting pathway(GO:0032510)
0.0	0.0	GO:1901748	leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750)
0.0	0.1	GO:0042447	phenol-containing compound catabolic process(GO:0019336) hormone catabolic process(GO:0042447)
0.0	0.1	GO:0030321	transepithelial chloride transport(GO:0030321)
0.0	0.1	GO:2000327	positive regulation of ligand-dependent nuclear receptor transcription coactivator activity(GO:2000327)
0.0	0.1	GO:0006863	purine nucleobase transport(GO:0006863) nucleobase transport(GO:0015851)
0.0	0.1	GO:0090086	negative regulation of protein deubiquitination(GO:0090086)
0.0	0.0	GO:0045715	negative regulation of low-density lipoprotein particle receptor biosynthetic process(GO:0045715)
0.0	0.0	GO:2000687	negative regulation of rubidium ion transport(GO:2000681) negative regulation of rubidium ion transmembrane transporter activity(GO:2000687)
0.0	0.1	GO:0070837	dehydroascorbic acid transport(GO:0070837)
0.0	0.1	GO:0048096	chromatin-mediated maintenance of transcription(GO:0048096)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0044316	cone cell pedicle(GO:0044316)
0.0	0.1	GO:0033553	rDNA heterochromatin(GO:0033553)
0.0	0.0	GO:0034686	integrin alphav-beta8 complex(GO:0034686)
0.0	0.1	GO:0071438	invadopodium membrane(GO:0071438)
0.0	0.1	GO:0032059	bleb(GO:0032059)
0.0	0.1	GO:0030015	CCR4-NOT core complex(GO:0030015)
0.0	0.1	GO:0030868	smooth endoplasmic reticulum membrane(GO:0030868) smooth endoplasmic reticulum part(GO:0097425)
0.0	0.1	GO:0097443	sorting endosome(GO:0097443)
0.0	0.1	GO:0034365	discoidal high-density lipoprotein particle(GO:0034365)
0.0	0.1	GO:0098839	postsynaptic density membrane(GO:0098839)
0.0	0.2	GO:0031091	platelet alpha granule(GO:0031091)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0003845	11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity(GO:0003845)
0.0	0.2	GO:0034714	type III transforming growth factor beta receptor binding(GO:0034714)
0.0	0.1	GO:0033222	xylose binding(GO:0033222)
0.0	0.1	GO:0099583	neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration(GO:0099583)
0.0	0.1	GO:0015065	uridine nucleotide receptor activity(GO:0015065) G-protein coupled pyrimidinergic nucleotide receptor activity(GO:0071553)
0.0	0.1	GO:0008401	retinoic acid 4-hydroxylase activity(GO:0008401)
0.0	0.1	GO:0015489	polyamine transmembrane transporter activity(GO:0015203) putrescine transmembrane transporter activity(GO:0015489)
0.0	0.1	GO:0070653	high-density lipoprotein particle receptor binding(GO:0070653)
0.0	0.1	GO:0043237	laminin-1 binding(GO:0043237)
0.0	0.1	GO:0003828	alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity(GO:0003828)
0.0	0.1	GO:0004652	polynucleotide adenylyltransferase activity(GO:0004652)
0.0	0.2	GO:0102338	fatty acid elongase activity(GO:0009922) 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0	0.1	GO:0004931	extracellular ATP-gated cation channel activity(GO:0004931) ATP-gated ion channel activity(GO:0035381)
0.0	0.1	GO:0004977	melanocortin receptor activity(GO:0004977)
0.0	0.1	GO:0001875	lipopolysaccharide receptor activity(GO:0001875)
0.0	0.1	GO:0035827	rubidium ion transmembrane transporter activity(GO:0035827)
0.0	0.1	GO:0086056	voltage-gated calcium channel activity involved in AV node cell action potential(GO:0086056)
0.0	0.1	GO:0008239	dipeptidyl-peptidase activity(GO:0008239)
0.0	0.1	GO:0031726	CCR1 chemokine receptor binding(GO:0031726)
0.0	0.1	GO:0001163	RNA polymerase I regulatory region sequence-specific DNA binding(GO:0001163) RNA polymerase I CORE element sequence-specific DNA binding(GO:0001164)
0.0	0.1	GO:0016841	ammonia-lyase activity(GO:0016841)
0.0	0.1	GO:0051033	nucleic acid transmembrane transporter activity(GO:0051032) RNA transmembrane transporter activity(GO:0051033)
0.0	0.0	GO:0042903	tubulin deacetylase activity(GO:0042903)
0.0	0.2	GO:0098641	cadherin binding involved in cell-cell adhesion(GO:0098641)
0.0	0.1	GO:0035184	histone threonine kinase activity(GO:0035184)