GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Nkx2-2 Links NCBI RGD Ensembl	ENSRNOG00000012728	NK2 homeobox 2

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Nkx2-2	rn6_v1_chr3_-_141411170_141411170	-0.62	2.7e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr7_+_28654733 Show fit	0.89	ENSRNOT00000006174	Pmch Links NCBI RGD Ensembl Show fit	pro-melanin-concentrating hormone
chr14_-_37770059 Show fit	0.15	ENSRNOT00000029721	Slc10a4 Links NCBI RGD Ensembl Show fit	solute carrier family 10, member 4
chr2_+_71753816 Show fit	0.14	ENSRNOT00000025809	AABR07008724.1 Links NCBI RGD Ensembl Show fit
chr20_-_22459025 Show fit	0.12	ENSRNOT00000000792	Egr2 Links NCBI RGD Ensembl Show fit	early growth response 2
chr14_+_88549947 Show fit	0.11	ENSRNOT00000086177	Hnrnpc Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein C
chr4_-_120414118 Show fit	0.11	ENSRNOT00000072795	LOC100911337 Links NCBI RGD Ensembl Show fit	40S ribosomal protein S25-like
chr10_-_13780283 Show fit	0.10	ENSRNOT00000084200	AC103090.1 Links NCBI RGD Ensembl Show fit
chr1_-_227047290 Show fit	0.10	ENSRNOT00000037226	Ms4a15 Links NCBI RGD Ensembl Show fit	membrane spanning 4-domains A15
chr4_-_129430251 Show fit	0.10	ENSRNOT00000067881	Fam19a4 Links NCBI RGD Ensembl Show fit	family with sequence similarity 19 member A4, C-C motif chemokine like
chr4_+_6903198 Show fit	0.10	ENSRNOT00000012285	Crygn Links NCBI RGD Ensembl Show fit	crystallin, gamma N
chr8_+_82288705 Show fit	0.10	ENSRNOT00000012409	Bcl2l10 Links NCBI RGD Ensembl Show fit	BCL2 like 10
chr6_+_133552821 Show fit	0.09	ENSRNOT00000006339	Dlk1 Links NCBI RGD Ensembl Show fit	delta like non-canonical Notch ligand 1
chr20_-_4366957 Show fit	0.08	ENSRNOT00000088244	Rnf5 Links NCBI RGD Ensembl Show fit	ring finger protein 5
chr20_-_48310175 Show fit	0.08	ENSRNOT00000000351	Timm10b Links NCBI RGD Ensembl Show fit	translocase of inner mitochondrial membrane 10B
chr6_+_3375476 Show fit	0.08	ENSRNOT00000045349	LOC102551744 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 1-like
chr17_+_27452638 Show fit	0.08	ENSRNOT00000038349	Cage1 Links NCBI RGD Ensembl Show fit	cancer antigen 1
chr10_+_14258380 Show fit	0.08	ENSRNOT00000021650	Nme3 Links NCBI RGD Ensembl Show fit	NME/NM23 nucleoside diphosphate kinase 3
chr5_-_155709215 Show fit	0.08	ENSRNOT00000018118	Cdc42 Links NCBI RGD Ensembl Show fit	cell division cycle 42
chr12_+_37668369 Show fit	0.07	ENSRNOT00000001419	Cdk2ap1 Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase 2 associated protein 1
chr9_+_94928489 Show fit	0.07	ENSRNOT00000087366 ENSRNOT00000085770 ENSRNOT00000024733	Sag Links NCBI RGD Ensembl Show fit	S-antigen visual arrestin
chr9_-_121972055 Show fit	0.07	ENSRNOT00000089735	AABR07068851.1 Links NCBI RGD Ensembl Show fit	clusterin-like protein 1
chr2_+_207350651 Show fit	0.07	ENSRNOT00000019129	St7l Links NCBI RGD Ensembl Show fit	suppression of tumorigenicity 7-like
chr5_-_61077627 Show fit	0.07	ENSRNOT00000015338	Shb Links NCBI RGD Ensembl Show fit	SH2 domain containing adaptor protein B
chr14_-_44375804 Show fit	0.07	ENSRNOT00000042825	LOC100362751 Links NCBI RGD Ensembl Show fit	ribosomal protein P2-like
chr5_+_10125070 Show fit	0.07	ENSRNOT00000085321	AABR07046866.1 Links NCBI RGD Ensembl Show fit
chr14_-_43992587 Show fit	0.07	ENSRNOT00000003425	Rhoh Links NCBI RGD Ensembl Show fit	ras homolog family member H
chr4_-_28437676 Show fit	0.07	ENSRNOT00000012995	Hepacam2 Links NCBI RGD Ensembl Show fit	HEPACAM family member 2
chr18_-_86279680 Show fit	0.07	ENSRNOT00000006169	LOC689166 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC689166
chr17_+_44763598 Show fit	0.07	ENSRNOT00000079880	Hist1h3b Links NCBI RGD Ensembl Show fit	histone cluster 1, H3b
chr1_+_227670159 Show fit	0.07	ENSRNOT00000072077	Ms4a6c Links NCBI RGD Ensembl Show fit	membrane-spanning 4-domains, subfamily A, member 6C
chr14_-_18531179 Show fit	0.06	ENSRNOT00000003703	Areg Links NCBI RGD Ensembl Show fit	amphiregulin
chr5_+_144031402 Show fit	0.06	ENSRNOT00000011694	Csf3r Links NCBI RGD Ensembl Show fit	colony stimulating factor 3 receptor
chr6_+_8669722 Show fit	0.06	ENSRNOT00000048550	Camkmt Links NCBI RGD Ensembl Show fit	calmodulin-lysine N-methyltransferase
chr17_+_85500113 Show fit	0.06	ENSRNOT00000091937	AABR07028768.1 Links NCBI RGD Ensembl Show fit
chr18_-_74151950 Show fit	0.06	ENSRNOT00000023101	Haus1 Links NCBI RGD Ensembl Show fit	HAUS augmin-like complex, subunit 1
chr1_+_169145445 Show fit	0.06	ENSRNOT00000034019	LOC499219 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC499219
chr2_-_98610368 Show fit	0.06	ENSRNOT00000011641	Zfhx4 Links NCBI RGD Ensembl Show fit	zinc finger homeobox 4
chr10_+_40247436 Show fit	0.06	ENSRNOT00000079830	Gpx3 Links NCBI RGD Ensembl Show fit	glutathione peroxidase 3
chr13_-_52136127 Show fit	0.06	ENSRNOT00000009398	Timm17a Links NCBI RGD Ensembl Show fit	translocase of inner mitochondrial membrane 17 homolog A (yeast)
chr4_-_120041238 Show fit	0.06	ENSRNOT00000073799	LOC100911337 Links NCBI RGD Ensembl Show fit	40S ribosomal protein S25-like
chr1_+_98398660 Show fit	0.06	ENSRNOT00000047473	Cd33 Links NCBI RGD Ensembl Show fit	CD33 molecule
chr8_+_79054237 Show fit	0.06	ENSRNOT00000077613	Mns1 Links NCBI RGD Ensembl Show fit	meiosis-specific nuclear structural 1
chr3_+_149466770 Show fit	0.06	ENSRNOT00000065104	Bpifa6 Links NCBI RGD Ensembl Show fit	BPI fold containing family A, member 6
chr19_+_56220755 Show fit	0.06	ENSRNOT00000023452	Tubb3 Links NCBI RGD Ensembl Show fit	tubulin, beta 3 class III
chr20_+_13827132 Show fit	0.06	ENSRNOT00000001664	Ddt Links NCBI RGD Ensembl Show fit	D-dopachrome tautomerase
chr14_+_88543630 Show fit	0.06	ENSRNOT00000060515	Hnrnpc Links NCBI RGD Ensembl Show fit	heterogeneous nuclear ribonucleoprotein C
chr20_-_4542947 Show fit	0.06	ENSRNOT00000086140	Cfb Links NCBI RGD Ensembl Show fit	complement factor B
chr2_+_207351051 Show fit	0.06	ENSRNOT00000084302	St7l Links NCBI RGD Ensembl Show fit	suppression of tumorigenicity 7-like
chr7_-_29949603 Show fit	0.06	ENSRNOT00000009419	LOC103692829 Links NCBI RGD Ensembl Show fit	60S ribosomal protein L9 pseudogene
chr1_+_175445088 Show fit	0.06	ENSRNOT00000036718	Adm Links NCBI RGD Ensembl Show fit	adrenomedullin
chr1_+_101410019 Show fit	0.05	ENSRNOT00000042039	Lhb Links NCBI RGD Ensembl Show fit	luteinizing hormone beta polypeptide
chr1_-_104202591 Show fit	0.05	ENSRNOT00000035512	E2f8 Links NCBI RGD Ensembl Show fit	E2F transcription factor 8
chr7_-_68512397 Show fit	0.05	ENSRNOT00000058036	Slc16a7 Links NCBI RGD Ensembl Show fit	solute carrier family 16 member 7
chr10_+_14062331 Show fit	0.05	ENSRNOT00000029652	Noxo1 Links NCBI RGD Ensembl Show fit	NADPH oxidase organizer 1
chr1_-_211956858 Show fit	0.05	ENSRNOT00000054886	Cfap46 Links NCBI RGD Ensembl Show fit	cilia and flagella associated protein 46
chr13_-_89433815 Show fit	0.05	ENSRNOT00000091541	Fcgr2b Links NCBI RGD Ensembl Show fit	Fc fragment of IgG receptor IIb
chr10_-_39405311 Show fit	0.05	ENSRNOT00000074616	Pdlim4 Links NCBI RGD Ensembl Show fit	PDZ and LIM domain 4
chr1_-_80716143 Show fit	0.05	ENSRNOT00000092048 ENSRNOT00000025829	Cblc Links NCBI RGD Ensembl Show fit	Cbl proto-oncogene C
chr1_-_44474674 Show fit	0.05	ENSRNOT00000078768	Tfb1m Links NCBI RGD Ensembl Show fit	transcription factor B1, mitochondrial
chr15_+_4850122 Show fit	0.05	ENSRNOT00000071133	Gng2 Links NCBI RGD Ensembl Show fit	G protein subunit gamma 2
chrX_+_78259409 Show fit	0.05	ENSRNOT00000049779	RGD1560455 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA A630033H20 gene
chr20_-_4391402 Show fit	0.05	ENSRNOT00000090518 ENSRNOT00000083489	Ppt2 Links NCBI RGD Ensembl Show fit	palmitoyl-protein thioesterase 2
chr6_-_22138286 Show fit	0.05	ENSRNOT00000007607	Yipf4 Links NCBI RGD Ensembl Show fit	Yip1 domain family, member 4
chr1_-_233140237 Show fit	0.05	ENSRNOT00000083372	Psat1 Links NCBI RGD Ensembl Show fit	phosphoserine aminotransferase 1
chr1_-_196883051 Show fit	0.05	ENSRNOT00000055034	Nsmce1 Links NCBI RGD Ensembl Show fit	NSE1 homolog, SMC5-SMC6 complex component
chr2_-_154763094 Show fit	0.05	ENSRNOT00000031015	Vom2r46 Links NCBI RGD Ensembl Show fit	vomeronasal 2 receptor, 46
chr19_-_9843673 Show fit	0.05	ENSRNOT00000015795	Gins3 Links NCBI RGD Ensembl Show fit	GINS complex subunit 3
chr1_+_7252349 Show fit	0.05	ENSRNOT00000030329	Plagl1 Links NCBI RGD Ensembl Show fit	PLAG1 like zinc finger 1
chr11_+_32450587 Show fit	0.05	ENSRNOT00000061235	Smim11 Links NCBI RGD Ensembl Show fit	small integral membrane protein 11
chr2_-_91497091 Show fit	0.05	ENSRNOT00000015185	Pcsk1 Links NCBI RGD Ensembl Show fit	proprotein convertase subtilisin/kexin type 1
chr2_-_147392062 Show fit	0.05	ENSRNOT00000021535	Tm4sf1 Links NCBI RGD Ensembl Show fit	transmembrane 4 L six family member 1
chr20_+_47911018 Show fit	0.05	ENSRNOT00000038842	LOC688390 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC688390
chr2_-_26870421 Show fit	0.05	ENSRNOT00000088791	AABR07007744.2 Links NCBI RGD Ensembl Show fit
chr18_+_81694808 Show fit	0.05	ENSRNOT00000020446	Cyb5a Links NCBI RGD Ensembl Show fit	cytochrome b5 type A
chrX_-_139229702 Show fit	0.05	ENSRNOT00000042507	AABR07041771.1 Links NCBI RGD Ensembl Show fit
chr10_+_85257876 Show fit	0.04	ENSRNOT00000014752	Mrpl45 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein L45
chr1_-_98570949 Show fit	0.04	ENSRNOT00000033648	Siglec5 Links NCBI RGD Ensembl Show fit	sialic acid binding Ig-like lectin 5
chrX_+_110404022 Show fit	0.04	ENSRNOT00000041044	Mum1l1 Links NCBI RGD Ensembl Show fit	MUM1 like 1
chr17_-_13393243 Show fit	0.04	ENSRNOT00000018252	Gadd45g Links NCBI RGD Ensembl Show fit	growth arrest and DNA-damage-inducible, gamma
chr17_-_43537293 Show fit	0.04	ENSRNOT00000091749	Slc17a3 Links NCBI RGD Ensembl Show fit	solute carrier family 17 member 3
chrX_-_138435391 Show fit	0.04	ENSRNOT00000043258	Mbnl3 Links NCBI RGD Ensembl Show fit	muscleblind-like splicing regulator 3
chr16_-_38063821 Show fit	0.04	ENSRNOT00000077452 ENSRNOT00000089533	Glra3 Links NCBI RGD Ensembl Show fit	glycine receptor, alpha 3
chr16_-_37908173 Show fit	0.04	ENSRNOT00000075026	Glra3 Links NCBI RGD Ensembl Show fit	glycine receptor, alpha 3
chrX_+_14019961 Show fit	0.04	ENSRNOT00000004785	Sytl5 Links NCBI RGD Ensembl Show fit	synaptotagmin-like 5
chr18_+_30023828 Show fit	0.04	ENSRNOT00000079008	Pcdha4 Links NCBI RGD Ensembl Show fit	protocadherin alpha 4
chr5_-_164747083 Show fit	0.04	ENSRNOT00000010433	Plod1 Links NCBI RGD Ensembl Show fit	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1
chrX_+_78372257 Show fit	0.04	ENSRNOT00000046164	Gpr174 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 174
chr5_-_151895016 Show fit	0.04	ENSRNOT00000081841	Pigv Links NCBI RGD Ensembl Show fit	phosphatidylinositol glycan anchor biosynthesis, class V
chr2_+_92559929 Show fit	0.04	ENSRNOT00000033404	tGap1 Links NCBI RGD Ensembl Show fit	GTPase activating protein testicular GAP1
chr7_+_107413691 Show fit	0.04	ENSRNOT00000007587	Phf20l1 Links NCBI RGD Ensembl Show fit	PHD finger protein 20-like protein 1
chr7_-_54778848 Show fit	0.04	ENSRNOT00000005399	Glipr1 Links NCBI RGD Ensembl Show fit	GLI pathogenesis-related 1
chr3_+_15379109 Show fit	0.04	ENSRNOT00000036495	Morn5 Links NCBI RGD Ensembl Show fit	MORN repeat containing 5
chr14_+_7630482 Show fit	0.04	ENSRNOT00000091581	LOC498330 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein MGC26744
chr3_+_112950890 Show fit	0.04	ENSRNOT00000015472	Ccndbp1 Links NCBI RGD Ensembl Show fit	cyclin D1 binding protein 1
chr13_-_90814119 Show fit	0.04	ENSRNOT00000011208	Tagln2 Links NCBI RGD Ensembl Show fit	transgelin 2
chr1_-_163148948 Show fit	0.04	ENSRNOT00000046850	B3gnt6 Links NCBI RGD Ensembl Show fit	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6
chr1_+_93242050 Show fit	0.04	ENSRNOT00000013741	RGD1562402 Links NCBI RGD Ensembl Show fit	similar to 60S ribosomal protein L27a
chr18_+_35574002 Show fit	0.04	ENSRNOT00000093442 ENSRNOT00000070817 ENSRNOT00000093356	Myot Links NCBI RGD Ensembl Show fit	myotilin
chr9_+_95221474 Show fit	0.04	ENSRNOT00000066839	Ugt1a5 Links NCBI RGD Ensembl Show fit	UDP glucuronosyltransferase family 1 member A5
chr18_+_57654290 Show fit	0.04	ENSRNOT00000025892	Htr4 Links NCBI RGD Ensembl Show fit	5-hydroxytryptamine receptor 4
chr20_-_5112258 Show fit	0.04	ENSRNOT00000092222	Csnk2b Links NCBI RGD Ensembl Show fit	casein kinase 2 beta
chr7_+_129973480 Show fit	0.04	ENSRNOT00000050620 ENSRNOT00000042686	Mov10l1 Links NCBI RGD Ensembl Show fit	Mov10 RISC complex RNA helicase like 1
chr4_-_182600258 Show fit	0.04	ENSRNOT00000067970	Ergic2 Links NCBI RGD Ensembl Show fit	ERGIC and golgi 2
chr8_-_132919110 Show fit	0.04	ENSRNOT00000008747	Xcr1 Links NCBI RGD Ensembl Show fit	X-C motif chemokine receptor 1
chr8_-_39266959 Show fit	0.04	ENSRNOT00000046590	Ei24 Links NCBI RGD Ensembl Show fit	EI24, autophagy associated transmembrane protein
chr7_+_140781799 Show fit	0.04	ENSRNOT00000087932	Dnajc22 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member C22
chr12_-_22710674 Show fit	0.04	ENSRNOT00000050456	Mogat3 Links NCBI RGD Ensembl Show fit	monoacylglycerol O-acyltransferase 3
chr13_+_42220251 Show fit	0.04	ENSRNOT00000078185	AABR07020815.1 Links NCBI RGD Ensembl Show fit
chr6_+_129609375 Show fit	0.04	ENSRNOT00000083732	Papola Links NCBI RGD Ensembl Show fit	poly (A) polymerase alpha
chr2_-_93641497 Show fit	0.04	ENSRNOT00000013720	Chmp4c Links NCBI RGD Ensembl Show fit	charged multivesicular body protein 4C
chr3_-_133232322 Show fit	0.04	ENSRNOT00000034487	Esf1 Links NCBI RGD Ensembl Show fit	ESF1 nucleolar pre-rRNA processing protein homolog
chr10_-_56429748 Show fit	0.04	ENSRNOT00000020675 ENSRNOT00000092704	Spem1 Links NCBI RGD Ensembl Show fit	spermatid maturation 1
chr3_-_120011364 Show fit	0.04	ENSRNOT00000018922	Fahd2a Links NCBI RGD Ensembl Show fit	fumarylacetoacetate hydrolase domain containing 2A
chr8_-_115149419 Show fit	0.04	ENSRNOT00000016056 ENSRNOT00000077514	Abhd14a Links NCBI RGD Ensembl Show fit	abhydrolase domain containing 14A
chr19_+_26022849 Show fit	0.03	ENSRNOT00000014887	Dnase2 Links NCBI RGD Ensembl Show fit	deoxyribonuclease 2, lysosomal
chr14_-_11198194 Show fit	0.03	ENSRNOT00000003083	Enoph1 Links NCBI RGD Ensembl Show fit	enolase-phosphatase 1
chr11_+_74984613 Show fit	0.03	ENSRNOT00000035049	Atp13a5 Links NCBI RGD Ensembl Show fit	ATPase 13A5
chr4_-_140220487 Show fit	0.03	ENSRNOT00000009008	Sumf1 Links NCBI RGD Ensembl Show fit	sulfatase modifying factor 1
chr5_+_15043955 Show fit	0.03	ENSRNOT00000047093	Rp1 Links NCBI RGD Ensembl Show fit	retinitis pigmentosa 1
chr9_+_37727942 Show fit	0.03	ENSRNOT00000016511 ENSRNOT00000074276	LOC100912306 Links NCBI RGD Ensembl Show fit	myotilin-like
chr13_+_90116843 Show fit	0.03	ENSRNOT00000006306	Cd48 Links NCBI RGD Ensembl Show fit	Cd48 molecule
chr1_+_102924059 Show fit	0.03	ENSRNOT00000078137	AC099150.1 Links NCBI RGD Ensembl Show fit
chr9_+_91001828 Show fit	0.03	ENSRNOT00000080956	AABR07068214.1 Links NCBI RGD Ensembl Show fit
chr10_+_58613674 Show fit	0.03	ENSRNOT00000010975	Fam64a Links NCBI RGD Ensembl Show fit	family with sequence similarity 64, member A
chr10_-_66848388 Show fit	0.03	ENSRNOT00000018891	Omg Links NCBI RGD Ensembl Show fit	oligodendrocyte-myelin glycoprotein
chr11_-_78327282 Show fit	0.03	ENSRNOT00000002636	Tp63 Links NCBI RGD Ensembl Show fit	tumor protein p63
chr2_+_205568935 Show fit	0.03	ENSRNOT00000025248	Ampd1 Links NCBI RGD Ensembl Show fit	adenosine monophosphate deaminase 1
chr4_-_98593664 Show fit	0.03	ENSRNOT00000007927	Rpia Links NCBI RGD Ensembl Show fit	ribose 5-phosphate isomerase A
chr9_-_71852113 Show fit	0.03	ENSRNOT00000083263 ENSRNOT00000072983	AABR07067896.1 Links NCBI RGD Ensembl Show fit
chr1_+_125229469 Show fit	0.03	ENSRNOT00000021884	Mcee Links NCBI RGD Ensembl Show fit	methylmalonyl CoA epimerase
chr14_+_100135271 Show fit	0.03	ENSRNOT00000032965	Fbxo48 Links NCBI RGD Ensembl Show fit	F-box protein 48
chr8_+_99636749 Show fit	0.03	ENSRNOT00000086524	Plscr1 Links NCBI RGD Ensembl Show fit	phospholipid scramblase 1
chr1_+_101623308 Show fit	0.03	ENSRNOT00000029167	Mamstr Links NCBI RGD Ensembl Show fit	MEF2 activating motif and SAP domain containing transcriptional regulator
chr13_+_51218468 Show fit	0.03	ENSRNOT00000033636	LOC289035 Links NCBI RGD Ensembl Show fit	similar to UDP-N-acetylglucosamine:a-1,3-D-mannoside beta-1,4-N-acetylgluco
chrX_-_113228265 Show fit	0.03	ENSRNOT00000060001	RGD1566136 Links NCBI RGD Ensembl Show fit	similar to 40S ribosomal protein S9
chr2_-_250923744 Show fit	0.03	ENSRNOT00000084996	Clca1 Links NCBI RGD Ensembl Show fit	chloride channel accessory 1
chr1_-_190965115 Show fit	0.03	ENSRNOT00000023483	AC103221.1 Links NCBI RGD Ensembl Show fit
chr1_+_169562247 Show fit	0.03	ENSRNOT00000023124	Olr153 Links NCBI RGD Ensembl Show fit	olfactory receptor 153
chr1_+_101249522 Show fit	0.03	ENSRNOT00000033882	Slc6a16 Links NCBI RGD Ensembl Show fit	solute carrier family 6, member 16
chr9_+_92681078 Show fit	0.03	ENSRNOT00000034152	Sp100 Links NCBI RGD Ensembl Show fit	SP100 nuclear antigen
chr7_-_104556419 Show fit	0.03	ENSRNOT00000090784	Fam49b Links NCBI RGD Ensembl Show fit	family with sequence similarity 49, member B
chr13_-_89874008 Show fit	0.03	ENSRNOT00000051368	Ptma Links NCBI RGD Ensembl Show fit	prothymosin alpha
chr10_-_87437455 Show fit	0.03	ENSRNOT00000051080	Krt39 Links NCBI RGD Ensembl Show fit	keratin 39
chr12_-_2826378 Show fit	0.03	ENSRNOT00000061749	Clec4m Links NCBI RGD Ensembl Show fit	C-type lectin domain family 4 member M
chr5_-_6083083 Show fit	0.03	ENSRNOT00000072411	Sulf1 Links NCBI RGD Ensembl Show fit	sulfatase 1
chr8_-_108777717 Show fit	0.03	ENSRNOT00000034188	Il20rb Links NCBI RGD Ensembl Show fit	interleukin 20 receptor subunit beta
chr13_+_52887649 Show fit	0.03	ENSRNOT00000048033	Ascl5 Links NCBI RGD Ensembl Show fit	achaete-scute family bHLH transcription factor 5
chr12_-_19439977 Show fit	0.03	ENSRNOT00000060035	Nxpe5 Links NCBI RGD Ensembl Show fit	neurexophilin and PC-esterase domain family, member 5
chr8_+_113603533 Show fit	0.03	ENSRNOT00000017280	Mrpl3 Links NCBI RGD Ensembl Show fit	mitochondrial ribosomal protein L3
chr13_+_76962504 Show fit	0.03	ENSRNOT00000076581	Rfwd2 Links NCBI RGD Ensembl Show fit	ring finger and WD repeat domain 2
chr16_-_32439421 Show fit	0.03	ENSRNOT00000043100	Nek1 Links NCBI RGD Ensembl Show fit	NIMA-related kinase 1
chr7_+_133856101 Show fit	0.03	ENSRNOT00000038686	Pdzrn4 Links NCBI RGD Ensembl Show fit	PDZ domain containing RING finger 4
chr4_+_97657671 Show fit	0.03	ENSRNOT00000075400	Gng12 Links NCBI RGD Ensembl Show fit	G protein subunit gamma 12
chr3_+_133232432 Show fit	0.03	ENSRNOT00000006412	Ndufaf5 Links NCBI RGD Ensembl Show fit	NADH:ubiquinone oxidoreductase complex assembly factor 5
chr14_-_44225713 Show fit	0.03	ENSRNOT00000049161	LOC680579 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein L14
chr16_-_20873344 Show fit	0.03	ENSRNOT00000027381	Cope Links NCBI RGD Ensembl Show fit	coatomer protein complex, subunit epsilon
chr8_+_55603968 Show fit	0.03	ENSRNOT00000066848	Pou2af1 Links NCBI RGD Ensembl Show fit	POU class 2 associating factor 1
chr3_+_160467552 Show fit	0.03	ENSRNOT00000066657	Stk4 Links NCBI RGD Ensembl Show fit	serine/threonine kinase 4
chr14_+_33247274 Show fit	0.03	ENSRNOT00000075226	Spink2 Links NCBI RGD Ensembl Show fit	serine peptidase inhibitor, Kazal type 2
chr1_+_173252058 Show fit	0.03	ENSRNOT00000073421	LOC499229 Links NCBI RGD Ensembl Show fit	similar to very large inducible GTPase 1 isoform A
chr1_+_16478127 Show fit	0.03	ENSRNOT00000019076	Ahi1 Links NCBI RGD Ensembl Show fit	Abelson helper integration site 1
chr7_+_15621989 Show fit	0.02	ENSRNOT00000051928	Olr1095 Links NCBI RGD Ensembl Show fit	olfactory receptor 1095
chr3_+_11476883 Show fit	0.02	ENSRNOT00000072241	Naif1 Links NCBI RGD Ensembl Show fit	nuclear apoptosis inducing factor 1
chr11_-_46693565 Show fit	0.02	ENSRNOT00000044900	Impg2 Links NCBI RGD Ensembl Show fit	interphotoreceptor matrix proteoglycan 2
chr7_+_126736732 Show fit	0.02	ENSRNOT00000022012	Gtse1 Links NCBI RGD Ensembl Show fit	G-2 and S-phase expressed 1
chrX_+_74497262 Show fit	0.02	ENSRNOT00000003899	Zcchc13 Links NCBI RGD Ensembl Show fit	zinc finger CCHC-type containing 13
chr4_+_110699557 Show fit	0.02	ENSRNOT00000030588 ENSRNOT00000092261	Lrrtm4 Links NCBI RGD Ensembl Show fit	leucine rich repeat transmembrane neuronal 4
chr3_+_117421604 Show fit	0.02	ENSRNOT00000008860 ENSRNOT00000008857	Slc12a1 Links NCBI RGD Ensembl Show fit	solute carrier family 12 member 1
chr7_-_116920507 Show fit	0.02	ENSRNOT00000048363	Mroh6 Links NCBI RGD Ensembl Show fit	maestro heat-like repeat family member 6
chr2_+_205592182 Show fit	0.02	ENSRNOT00000081050	Dennd2c Links NCBI RGD Ensembl Show fit	DENN domain containing 2C
chr20_-_6195463 Show fit	0.02	ENSRNOT00000092474	Pxt1 Links NCBI RGD Ensembl Show fit	peroxisomal, testis specific 1
chr15_+_57290849 Show fit	0.02	ENSRNOT00000014909	Cpb2 Links NCBI RGD Ensembl Show fit	carboxypeptidase B2
chr3_+_38280489 Show fit	0.02	ENSRNOT00000011239	AABR07052130.1 Links NCBI RGD Ensembl Show fit
chr16_+_80729400 Show fit	0.02	ENSRNOT00000036383	Tdrp Links NCBI RGD Ensembl Show fit	testis development related protein
chr15_+_28319136 Show fit	0.02	ENSRNOT00000048723	Tppp2 Links NCBI RGD Ensembl Show fit	tubulin polymerization-promoting protein family member 2
chr6_+_109939345 Show fit	0.02	ENSRNOT00000013560	Ift43 Links NCBI RGD Ensembl Show fit	intraflagellar transport 43
chr15_-_49467174 Show fit	0.02	ENSRNOT00000019209	Adam7 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase domain 7
chr8_-_114766803 Show fit	0.02	ENSRNOT00000047563	Col6a4 Links NCBI RGD Ensembl Show fit	collagen, type VI, alpha 4
chr10_-_63219309 Show fit	0.02	ENSRNOT00000076357	Blmh Links NCBI RGD Ensembl Show fit	bleomycin hydrolase
chr13_-_35511020 Show fit	0.02	ENSRNOT00000003413	Ralb Links NCBI RGD Ensembl Show fit	RAS like proto-oncogene B
chr4_+_31333970 Show fit	0.02	ENSRNOT00000064866	LOC100911994 Links NCBI RGD Ensembl Show fit	coiled-coil domain-containing protein 132-like
chr6_-_99204590 Show fit	0.02	ENSRNOT00000041872 ENSRNOT00000007109	Esr2 Links NCBI RGD Ensembl Show fit	estrogen receptor 2
chr20_-_4390436 Show fit	0.02	ENSRNOT00000000497 ENSRNOT00000077655	Ppt2 Links NCBI RGD Ensembl Show fit	palmitoyl-protein thioesterase 2
chr4_-_23718047 Show fit	0.02	ENSRNOT00000011359	RGD1564345 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 4921511H03
chr2_+_243422811 Show fit	0.02	ENSRNOT00000014694	Trmt10a Links NCBI RGD Ensembl Show fit	tRNA methyltransferase 10A
chr1_+_198089446 Show fit	0.02	ENSRNOT00000026146	Sgf29 Links NCBI RGD Ensembl Show fit	SAGA complex associated factor 29
chr8_+_117126692 Show fit	0.02	ENSRNOT00000083046 ENSRNOT00000085609	Usp4 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 4
chr1_+_61095171 Show fit	0.02	ENSRNOT00000042702	Vom1r19 Links NCBI RGD Ensembl Show fit	vomeronasal 1 receptor 19
chr1_-_216750844 Show fit	0.02	ENSRNOT00000054862	Nap1l4 Links NCBI RGD Ensembl Show fit	nucleosome assembly protein 1-like 4
chr10_+_53595854 Show fit	0.02	ENSRNOT00000044116	Sco1 Links NCBI RGD Ensembl Show fit	SCO1 cytochrome c oxidase assembly protein
chr12_-_21450204 Show fit	0.02	ENSRNOT00000065866	LOC100910636 Links NCBI RGD Ensembl Show fit	zinc finger CW-type PWWP domain protein 1-like
chr4_+_119842013 Show fit	0.02	ENSRNOT00000057286	Hmces Links NCBI RGD Ensembl Show fit	5-hydroxymethylcytosine (hmC) binding, ES cell-specific
chr16_+_19973636 Show fit	0.02	ENSRNOT00000024413	Mvb12a Links NCBI RGD Ensembl Show fit	multivesicular body subunit 12A
chr7_-_12922112 Show fit	0.02	ENSRNOT00000010938	Madcam1 Links NCBI RGD Ensembl Show fit	mucosal vascular addressin cell adhesion molecule 1
chr10_-_110701137 Show fit	0.02	ENSRNOT00000074193	Znf750 Links NCBI RGD Ensembl Show fit	zinc finger protein 750
chr1_-_82004538 Show fit	0.02	ENSRNOT00000087572	Pou2f2 Links NCBI RGD Ensembl Show fit	POU class 2 homeobox 2
chr6_-_99273033 Show fit	0.02	ENSRNOT00000088808	Tex21 Links NCBI RGD Ensembl Show fit	testis expressed 21
chr20_-_32258286 Show fit	0.02	ENSRNOT00000082114	Ddx50 Links NCBI RGD Ensembl Show fit	DExD-box helicase 50
chr5_+_173340060 Show fit	0.02	ENSRNOT00000067841	Acap3 Links NCBI RGD Ensembl Show fit	ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
chr4_-_119591817 Show fit	0.02	ENSRNOT00000048768	AC097129.1 Links NCBI RGD Ensembl Show fit

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.9	GO:0032227	negative regulation of synaptic transmission, dopaminergic(GO:0032227)
0.0	0.1	GO:0021593	rhombomere morphogenesis(GO:0021593)
0.0	0.2	GO:0090367	negative regulation of mRNA modification(GO:0090367)
0.0	0.1	GO:0060661	submandibular salivary gland formation(GO:0060661) positive regulation of hair follicle cell proliferation(GO:0071338)
0.0	0.1	GO:0002884	negative regulation of hypersensitivity(GO:0002884)
0.0	0.0	GO:0010157	response to chlorate(GO:0010157)
0.0	0.1	GO:1900194	negative regulation of oocyte maturation(GO:1900194)
0.0	0.0	GO:0046947	hydroxylysine metabolic process(GO:0046946) hydroxylysine biosynthetic process(GO:0046947)
0.0	0.0	GO:0001928	regulation of exocyst assembly(GO:0001928)
0.0	0.1	GO:0032466	negative regulation of cytokinesis(GO:0032466)
0.0	0.1	GO:0060744	thelarche(GO:0042695) mammary gland branching involved in thelarche(GO:0060744)
0.0	0.1	GO:1901475	pyruvate transmembrane transport(GO:1901475)
0.0	0.1	GO:0006564	L-serine biosynthetic process(GO:0006564)
0.0	0.0	GO:1902044	regulation of Fas signaling pathway(GO:1902044)
0.0	0.0	GO:2000567	memory T cell activation(GO:0035709) regulation of memory T cell activation(GO:2000567) positive regulation of memory T cell activation(GO:2000568)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:1990826	nucleoplasmic periphery of the nuclear pore complex(GO:1990826)
0.0	0.1	GO:0016935	glycine-gated chloride channel complex(GO:0016935) GABA-ergic synapse(GO:0098982)
0.0	0.1	GO:0042719	mitochondrial intermembrane space protein transporter complex(GO:0042719)
0.0	0.1	GO:0000322	storage vacuole(GO:0000322)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0008508	bile acid:sodium symporter activity(GO:0008508)
0.0	0.1	GO:0022852	glycine-gated chloride ion channel activity(GO:0022852)
0.0	0.1	GO:0032427	GBD domain binding(GO:0032427)
0.0	0.9	GO:0071855	neuropeptide receptor binding(GO:0071855)
0.0	0.1	GO:0051916	granulocyte colony-stimulating factor binding(GO:0051916)
0.0	0.2	GO:1990247	N6-methyladenosine-containing RNA binding(GO:1990247)
0.0	0.1	GO:0089720	caspase binding(GO:0089720)
0.0	0.1	GO:0004167	dopachrome isomerase activity(GO:0004167)
0.0	0.1	GO:0002046	opsin binding(GO:0002046)
0.0	0.1	GO:0000179	rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.0	0.0	GO:0008475	procollagen-lysine 5-dioxygenase activity(GO:0008475) procollagen glucosyltransferase activity(GO:0033823)
0.0	0.0	GO:0034584	piRNA binding(GO:0034584)
0.0	0.1	GO:0050833	pyruvate transmembrane transporter activity(GO:0050833)
0.0	0.0	GO:0023030	MHC class Ib protein complex binding(GO:0023025) MHC class Ib protein binding, via antigen binding groove(GO:0023030)