GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Nfatc4 Links NCBI RGD Ensembl	ENSRNOG00000020482	nuclear factor of activated T-cells 4

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Nfatc4	rn6_v1_chr15_+_34493138_34493163	0.18	7.7e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr2_-_123851854 Show fit	0.04	ENSRNOT00000023327	Il2 Links NCBI RGD Ensembl Show fit	interleukin 2
chr4_-_159697207 Show fit	0.03	ENSRNOT00000086440	Ccnd2 Links NCBI RGD Ensembl Show fit	cyclin D2
chr10_-_38969501 Show fit	0.03	ENSRNOT00000090691 ENSRNOT00000081309 ENSRNOT00000010029	Il4 Links NCBI RGD Ensembl Show fit	interleukin 4
chr2_+_11658568 Show fit	0.03	ENSRNOT00000076408 ENSRNOT00000076416 ENSRNOT00000076992 ENSRNOT00000075931 ENSRNOT00000076136 ENSRNOT00000076481 ENSRNOT00000076084 ENSRNOT00000076230 ENSRNOT00000076710 ENSRNOT00000076239	Mef2c Links NCBI RGD Ensembl Show fit	myocyte enhancer factor 2C
chr3_-_431933 Show fit	0.01	ENSRNOT00000033653	Spopl Links NCBI RGD Ensembl Show fit	speckle type BTB/POZ protein like
chr20_-_4542947 Show fit	0.01	ENSRNOT00000086140	Cfb Links NCBI RGD Ensembl Show fit	complement factor B
chr9_-_32019205 Show fit	0.01	ENSRNOT00000016194	Adgrb3 Links NCBI RGD Ensembl Show fit	adhesion G protein-coupled receptor B3
chr3_+_72191533 Show fit	0.01	ENSRNOT00000044319	Ube2l6 Links NCBI RGD Ensembl Show fit	ubiquitin-conjugating enzyme E2L 6
chr2_-_247446882 Show fit	0.01	ENSRNOT00000021963	Bmpr1b Links NCBI RGD Ensembl Show fit	bone morphogenetic protein receptor type 1B
chr8_-_36374673 Show fit	0.01	ENSRNOT00000013763	Dcps Links NCBI RGD Ensembl Show fit	decapping enzyme, scavenger
chr10_-_32471454 Show fit	0.01	ENSRNOT00000003224	Sgcd Links NCBI RGD Ensembl Show fit	sarcoglycan, delta
chr15_+_24479761 Show fit	0.01	ENSRNOT00000016449	Ktn1 Links NCBI RGD Ensembl Show fit	kinectin 1
chr6_+_115170865 Show fit	0.01	ENSRNOT00000005671	Tshr Links NCBI RGD Ensembl Show fit	thyroid stimulating hormone receptor
chr1_-_270472866 Show fit	0.00	ENSRNOT00000015979	Sorcs1 Links NCBI RGD Ensembl Show fit	sortilin-related VPS10 domain containing receptor 1
chr2_+_149315189 Show fit	0.00	ENSRNOT00000082464	Med12l Links NCBI RGD Ensembl Show fit	mediator complex subunit 12-like
chr5_+_151362019 Show fit	0.00	ENSRNOT00000077083 ENSRNOT00000067801	Wasf2 Links NCBI RGD Ensembl Show fit	WAS protein family, member 2
chr7_+_35773928 Show fit	0.00	ENSRNOT00000034639	Cep83 Links NCBI RGD Ensembl Show fit	centrosomal protein 83
chr9_+_53013413 Show fit	0.00	ENSRNOT00000005313	Ankar Links NCBI RGD Ensembl Show fit	ankyrin and armadillo repeat containing
chr3_-_120157866 Show fit	0.00	ENSRNOT00000020367	LOC100909998 Links NCBI RGD Ensembl Show fit	zinc finger protein 2-like
chr2_-_184263564 Show fit	0.00	ENSRNOT00000015279	Fbxw7 Links NCBI RGD Ensembl Show fit	F-box and WD repeat domain containing 7
chr14_-_114692764 Show fit	0.00	ENSRNOT00000008210	Sptbn1 Links NCBI RGD Ensembl Show fit	spectrin, beta, non-erythrocytic 1
chr5_-_28130803 Show fit	0.00	ENSRNOT00000093186	Slc26a7 Links NCBI RGD Ensembl Show fit	solute carrier family 26 member 7

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:0046013	regulation of T cell homeostatic proliferation(GO:0046013)
0.0	0.0	GO:0002296	T-helper 1 cell lineage commitment(GO:0002296) negative regulation of complement-dependent cytotoxicity(GO:1903660) regulation of eosinophil chemotaxis(GO:2000422) positive regulation of eosinophil chemotaxis(GO:2000424)