GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Myog Links NCBI RGD Ensembl	ENSRNOG00000030743	myogenin
Tcf12 Links NCBI RGD Ensembl	ENSRNOG00000057754	transcription factor 12

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Tcf12	rn6_v1_chr8_-_78655856_78655856	0.78	1.2e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr7_-_115910522 Show fit	0.26	ENSRNOT00000076998 ENSRNOT00000067442	Arc Links NCBI RGD Ensembl Show fit	activity-regulated cytoskeleton-associated protein
chr19_-_55510460 Show fit	0.19	ENSRNOT00000019820	Cbfa2t3 Links NCBI RGD Ensembl Show fit	CBFA2/RUNX1 translocation partner 3
chr10_+_85301875 Show fit	0.17	ENSRNOT00000080935	Socs7 Links NCBI RGD Ensembl Show fit	suppressor of cytokine signaling 7
chr5_+_63781801 Show fit	0.17	ENSRNOT00000008302	Nr4a3 Links NCBI RGD Ensembl Show fit	nuclear receptor subfamily 4, group A, member 3
chr11_+_3119885 Show fit	0.16	ENSRNOT00000042316	Vgll3 Links NCBI RGD Ensembl Show fit	vestigial-like family member 3
chr7_+_130532435 Show fit	0.16	ENSRNOT00000092672 ENSRNOT00000092535	Shank3 Links NCBI RGD Ensembl Show fit	SH3 and multiple ankyrin repeat domains 3
chr2_-_231521052 Show fit	0.16	ENSRNOT00000089534 ENSRNOT00000080470 ENSRNOT00000084756	Ank2 Links NCBI RGD Ensembl Show fit	ankyrin 2
chr10_+_71278650 Show fit	0.16	ENSRNOT00000092020	Synrg Links NCBI RGD Ensembl Show fit	synergin, gamma
chr2_-_21698937 Show fit	0.15	ENSRNOT00000080165	AABR07007642.1 Links NCBI RGD Ensembl Show fit
chr18_+_56193978 Show fit	0.15	ENSRNOT00000041533 ENSRNOT00000080177	Camk2a Links NCBI RGD Ensembl Show fit	calcium/calmodulin-dependent protein kinase II alpha
chr6_-_65319527 Show fit	0.15	ENSRNOT00000005618	Stxbp6 Links NCBI RGD Ensembl Show fit	syntaxin binding protein 6
chr3_-_147865393 Show fit	0.14	ENSRNOT00000009852	Sox12 Links NCBI RGD Ensembl Show fit	SRY box 12
chr3_+_175144495 Show fit	0.14	ENSRNOT00000082601 ENSRNOT00000088026	Cdh4 Links NCBI RGD Ensembl Show fit	cadherin 4
chr17_-_10208360 Show fit	0.12	ENSRNOT00000087397	Unc5a Links NCBI RGD Ensembl Show fit	unc-5 netrin receptor A
chr4_-_159697207 Show fit	0.11	ENSRNOT00000086440	Ccnd2 Links NCBI RGD Ensembl Show fit	cyclin D2
chr10_+_11393103 Show fit	0.11	ENSRNOT00000076022	Adcy9 Links NCBI RGD Ensembl Show fit	adenylate cyclase 9
chr12_-_25638797 Show fit	0.11	ENSRNOT00000002033	Gatsl2 Links NCBI RGD Ensembl Show fit	GATS protein-like 2
chr9_+_49479023 Show fit	0.11	ENSRNOT00000050922 ENSRNOT00000077111	Pou3f3 Links NCBI RGD Ensembl Show fit	POU class 3 homeobox 3
chr5_-_58469399 Show fit	0.11	ENSRNOT00000013213	Pigo Links NCBI RGD Ensembl Show fit	phosphatidylinositol glycan anchor biosynthesis, class O
chr10_-_64642292 Show fit	0.10	ENSRNOT00000084670	Abr Links NCBI RGD Ensembl Show fit	active BCR-related
chr5_+_172364421 Show fit	0.10	ENSRNOT00000018769	Hes5 Links NCBI RGD Ensembl Show fit	hes family bHLH transcription factor 5
chr19_-_58735173 Show fit	0.10	ENSRNOT00000030077	Pcnx2 Links NCBI RGD Ensembl Show fit	pecanex homolog 2 (Drosophila)
chr15_-_33725188 Show fit	0.10	ENSRNOT00000083941	Zfhx2 Links NCBI RGD Ensembl Show fit	zinc finger homeobox 2
chr11_+_71151132 Show fit	0.10	ENSRNOT00000082594 ENSRNOT00000082435	Rubcn Links NCBI RGD Ensembl Show fit	RUN and cysteine rich domain containing beclin 1 interacting protein
chr12_+_28212333 Show fit	0.10	ENSRNOT00000001182	Auts2 Links NCBI RGD Ensembl Show fit	autism susceptibility candidate 2
chr17_+_13670520 Show fit	0.10	ENSRNOT00000019442	Shc3 Links NCBI RGD Ensembl Show fit	SHC adaptor protein 3
chr9_+_53627208 Show fit	0.10	ENSRNOT00000083487	Mfsd6 Links NCBI RGD Ensembl Show fit	major facilitator superfamily domain containing 6
chrX_+_105239840 Show fit	0.09	ENSRNOT00000039864	Drp2 Links NCBI RGD Ensembl Show fit	dystrophin related protein 2
chr3_+_11207542 Show fit	0.09	ENSRNOT00000013546	Prrc2b Links NCBI RGD Ensembl Show fit	proline-rich coiled-coil 2B
chr4_+_84597323 Show fit	0.09	ENSRNOT00000074054 ENSRNOT00000012755	Wipf3 Links NCBI RGD Ensembl Show fit	WAS/WASL interacting protein family, member 3
chr4_-_125929002 Show fit	0.09	ENSRNOT00000083271	Magi1 Links NCBI RGD Ensembl Show fit	membrane associated guanylate kinase, WW and PDZ domain containing 1
chr14_-_112946875 Show fit	0.09	ENSRNOT00000081981	LOC103690141 Links NCBI RGD Ensembl Show fit	coiled-coil domain-containing protein 85A-like
chr10_-_110101872 Show fit	0.09	ENSRNOT00000071893	Ccdc57 Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 57
chr10_-_62699723 Show fit	0.08	ENSRNOT00000086706	Coro6 Links NCBI RGD Ensembl Show fit	coronin 6
chr9_+_94425252 Show fit	0.08	ENSRNOT00000064965 ENSRNOT00000076099	Gigyf2 Links NCBI RGD Ensembl Show fit	GRB10 interacting GYF protein 2
chr1_+_192233910 Show fit	0.08	ENSRNOT00000016418 ENSRNOT00000016442	Prkcb Links NCBI RGD Ensembl Show fit	protein kinase C, beta
chr10_+_83231238 Show fit	0.08	ENSRNOT00000077625	Spop Links NCBI RGD Ensembl Show fit	speckle type BTB/POZ protein
chr7_-_97977135 Show fit	0.08	ENSRNOT00000008785	Wdyhv1 Links NCBI RGD Ensembl Show fit	WDYHV motif containing 1
chr9_+_82120059 Show fit	0.08	ENSRNOT00000057368	Cdk5r2 Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase 5 regulatory subunit 2
chr8_+_63600663 Show fit	0.08	ENSRNOT00000012644	Hcn4 Links NCBI RGD Ensembl Show fit	hyperpolarization activated cyclic nucleotide-gated potassium channel 4
chr20_+_18780605 Show fit	0.08	ENSRNOT00000000754	Bicc1 Links NCBI RGD Ensembl Show fit	BicC family RNA binding protein 1
chr5_+_144634143 Show fit	0.08	ENSRNOT00000075558	RGD1563072 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein FLJ38984
chr9_-_82699551 Show fit	0.08	ENSRNOT00000020673	Obsl1 Links NCBI RGD Ensembl Show fit	obscurin-like 1
chr13_-_88642011 Show fit	0.08	ENSRNOT00000067037	LOC100361087 Links NCBI RGD Ensembl Show fit	hypothetical LOC100361087
chr3_-_58181971 Show fit	0.08	ENSRNOT00000002076	Dlx2 Links NCBI RGD Ensembl Show fit	distal-less homeobox 2
chr4_-_19413484 Show fit	0.07	ENSRNOT00000009489	Sema3d Links NCBI RGD Ensembl Show fit	semaphorin 3D
chr4_+_6282278 Show fit	0.07	ENSRNOT00000010349	Kmt2c Links NCBI RGD Ensembl Show fit	lysine methyltransferase 2C
chr2_+_77868412 Show fit	0.07	ENSRNOT00000065897 ENSRNOT00000014022	Myo10 Links NCBI RGD Ensembl Show fit	myosin X
chr5_-_158439078 Show fit	0.07	ENSRNOT00000025517	Klhdc7a Links NCBI RGD Ensembl Show fit	kelch domain containing 7A
chr9_-_80166807 Show fit	0.07	ENSRNOT00000079493	Igfbp5 Links NCBI RGD Ensembl Show fit	insulin-like growth factor binding protein 5
chr16_-_20097287 Show fit	0.07	ENSRNOT00000025162	Unc13a Links NCBI RGD Ensembl Show fit	unc-13 homolog A
chr10_-_54467956 Show fit	0.07	ENSRNOT00000065383	Usp43 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 43
chr15_+_19547871 Show fit	0.07	ENSRNOT00000036235	Gpr137c Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 137C
chr7_+_11033317 Show fit	0.07	ENSRNOT00000007498	Gna11 Links NCBI RGD Ensembl Show fit	guanine nucleotide binding protein, alpha 11
chr7_-_114590119 Show fit	0.07	ENSRNOT00000079599	Ptk2 Links NCBI RGD Ensembl Show fit	protein tyrosine kinase 2
chr5_-_151117042 Show fit	0.07	ENSRNOT00000066549	Fam76a Links NCBI RGD Ensembl Show fit	family with sequence similarity 76, member A
chr10_+_103713045 Show fit	0.07	ENSRNOT00000004351	Slc9a3r1 Links NCBI RGD Ensembl Show fit	SLC9A3 regulator 1
chr18_-_80865584 Show fit	0.07	ENSRNOT00000021750	Tshz1 Links NCBI RGD Ensembl Show fit	teashirt zinc finger homeobox 1
chr9_+_111028824 Show fit	0.07	ENSRNOT00000041418 ENSRNOT00000056457	Pam Links NCBI RGD Ensembl Show fit	peptidylglycine alpha-amidating monooxygenase
chr2_+_210381829 Show fit	0.07	ENSRNOT00000024611	Alx3 Links NCBI RGD Ensembl Show fit	ALX homeobox 3
chr20_+_3558827 Show fit	0.07	ENSRNOT00000088130	Ddr1 Links NCBI RGD Ensembl Show fit	discoidin domain receptor tyrosine kinase 1
chr3_+_47677720 Show fit	0.07	ENSRNOT00000065340	Tbr1 Links NCBI RGD Ensembl Show fit	T-box, brain, 1
chr4_+_9966891 Show fit	0.07	ENSRNOT00000086609	Napepld Links NCBI RGD Ensembl Show fit	N-acyl phosphatidylethanolamine phospholipase D
chr10_-_14299167 Show fit	0.07	ENSRNOT00000042066	Mapk8ip3 Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase 8 interacting protein 3
chr4_-_182844291 Show fit	0.07	ENSRNOT00000064320	Tmtc1 Links NCBI RGD Ensembl Show fit	transmembrane and tetratricopeptide repeat containing 1
chr3_-_7422738 Show fit	0.07	ENSRNOT00000088339	Gtf3c4 Links NCBI RGD Ensembl Show fit	general transcription factor IIIC subunit 4
chr17_+_9639330 Show fit	0.07	ENSRNOT00000018232	Dok3 Links NCBI RGD Ensembl Show fit	docking protein 3
chr14_+_12218553 Show fit	0.06	ENSRNOT00000003237	Prkg2 Links NCBI RGD Ensembl Show fit	protein kinase, cGMP-dependent, type II
chr1_-_277768368 Show fit	0.06	ENSRNOT00000023113	Afap1l2 Links NCBI RGD Ensembl Show fit	actin filament associated protein 1-like 2
chr7_-_58587787 Show fit	0.06	ENSRNOT00000005814	Lgr5 Links NCBI RGD Ensembl Show fit	leucine rich repeat containing G protein coupled receptor 5
chr1_+_220353356 Show fit	0.06	ENSRNOT00000080189	Cd248 Links NCBI RGD Ensembl Show fit	CD248 molecule
chr7_+_58366192 Show fit	0.06	ENSRNOT00000081891	Zfc3h1 Links NCBI RGD Ensembl Show fit	zinc finger, C3H1-type containing
chr1_-_88920291 Show fit	0.06	ENSRNOT00000028306	Kirrel2 Links NCBI RGD Ensembl Show fit	kin of IRRE like 2 (Drosophila)
chr17_-_84488480 Show fit	0.06	ENSRNOT00000000158 ENSRNOT00000075983	Nebl Links NCBI RGD Ensembl Show fit	nebulette
chr3_-_122947075 Show fit	0.06	ENSRNOT00000082369	Pced1a Links NCBI RGD Ensembl Show fit	PC-esterase domain containing 1A
chr15_+_110114148 Show fit	0.06	ENSRNOT00000006264	Itgbl1 Links NCBI RGD Ensembl Show fit	integrin subunit beta like 1
chr4_+_157538303 Show fit	0.06	ENSRNOT00000086418	Zfp384 Links NCBI RGD Ensembl Show fit	zinc finger protein 384
chr18_-_57245666 Show fit	0.06	ENSRNOT00000080365	Ablim3 Links NCBI RGD Ensembl Show fit	actin binding LIM protein family, member 3
chr1_+_170262156 Show fit	0.06	ENSRNOT00000024077 ENSRNOT00000085395	Cckbr Links NCBI RGD Ensembl Show fit	cholecystokinin B receptor
chr17_+_81922329 Show fit	0.06	ENSRNOT00000031542	Cacnb2 Links NCBI RGD Ensembl Show fit	calcium voltage-gated channel auxiliary subunit beta 2
chr16_-_49820235 Show fit	0.06	ENSRNOT00000029628	Sorbs2 Links NCBI RGD Ensembl Show fit	sorbin and SH3 domain containing 2
chr1_-_190370499 Show fit	0.06	ENSRNOT00000084389	AABR07005618.1 Links NCBI RGD Ensembl Show fit
chr1_-_256013495 Show fit	0.06	ENSRNOT00000023342	Ide Links NCBI RGD Ensembl Show fit	insulin degrading enzyme
chrX_-_157013443 Show fit	0.06	ENSRNOT00000082711	Srpk3 Links NCBI RGD Ensembl Show fit	SRSF protein kinase 3
chr20_-_27083410 Show fit	0.06	ENSRNOT00000000432	Atoh7 Links NCBI RGD Ensembl Show fit	atonal bHLH transcription factor 7
chrX_+_53360839 Show fit	0.06	ENSRNOT00000091467 ENSRNOT00000034372 ENSRNOT00000081061	Dmd Links NCBI RGD Ensembl Show fit	dystrophin
chr12_-_36398206 Show fit	0.06	ENSRNOT00000090944 ENSRNOT00000058492	Tmem132b Links NCBI RGD Ensembl Show fit	transmembrane protein 132B
chr10_-_92476109 Show fit	0.06	ENSRNOT00000089029	Kansl1 Links NCBI RGD Ensembl Show fit	KAT8 regulatory NSL complex subunit 1
chr1_-_64446818 Show fit	0.05	ENSRNOT00000081980	Myadm Links NCBI RGD Ensembl Show fit	myeloid-associated differentiation marker
chr17_+_9596957 Show fit	0.05	ENSRNOT00000017349	Fam193b Links NCBI RGD Ensembl Show fit	family with sequence similarity 193, member B
chr13_-_51784639 Show fit	0.05	ENSRNOT00000089068	Ppp1r12b Links NCBI RGD Ensembl Show fit	protein phosphatase 1, regulatory subunit 12B
chr7_-_2712723 Show fit	0.05	ENSRNOT00000004363	Il23a Links NCBI RGD Ensembl Show fit	interleukin 23 subunit alpha
chr18_-_14016713 Show fit	0.05	ENSRNOT00000041125	Nol4 Links NCBI RGD Ensembl Show fit	nucleolar protein 4
chr13_-_76049363 Show fit	0.05	ENSRNOT00000075865 ENSRNOT00000007455	Brinp2 Links NCBI RGD Ensembl Show fit	BMP/retinoic acid inducible neural specific 2
chr1_+_220362064 Show fit	0.05	ENSRNOT00000074361	LOC108348067 Links NCBI RGD Ensembl Show fit	endosialin
chr1_+_101214593 Show fit	0.05	ENSRNOT00000028086	Tead2 Links NCBI RGD Ensembl Show fit	TEA domain transcription factor 2
chr1_+_79989019 Show fit	0.05	ENSRNOT00000020428	Dmpk Links NCBI RGD Ensembl Show fit	dystrophia myotonica-protein kinase
chr17_-_80320681 Show fit	0.05	ENSRNOT00000023637	C1ql3 Links NCBI RGD Ensembl Show fit	complement C1q like 3
chr15_+_120372 Show fit	0.05	ENSRNOT00000007828	Dlg5 Links NCBI RGD Ensembl Show fit	discs large MAGUK scaffold protein 5
chr10_-_4910305 Show fit	0.05	ENSRNOT00000033122	Rmi2 Links NCBI RGD Ensembl Show fit	RecQ mediated genome instability 2
chr10_-_31359699 Show fit	0.05	ENSRNOT00000081280	Cyfip2 Links NCBI RGD Ensembl Show fit	cytoplasmic FMR1 interacting protein 2
chr18_-_38088457 Show fit	0.05	ENSRNOT00000077814	Jakmip2 Links NCBI RGD Ensembl Show fit	janus kinase and microtubule interacting protein 2
chr5_+_48274477 Show fit	0.05	ENSRNOT00000075992 ENSRNOT00000041271	Ube2j1 Links NCBI RGD Ensembl Show fit	ubiquitin-conjugating enzyme E2, J1
chr1_+_80000165 Show fit	0.05	ENSRNOT00000084912	Six5 Links NCBI RGD Ensembl Show fit	SIX homeobox 5
chr3_+_41019898 Show fit	0.05	ENSRNOT00000007335	Kcnj3 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily J member 3
chrX_+_88298266 Show fit	0.05	ENSRNOT00000041508	AABR07039936.1 Links NCBI RGD Ensembl Show fit
chr10_-_62814520 Show fit	0.05	ENSRNOT00000019410	Ssh2 Links NCBI RGD Ensembl Show fit	slingshot protein phosphatase 2
chr16_+_20740826 Show fit	0.05	ENSRNOT00000038057	Crtc1 Links NCBI RGD Ensembl Show fit	CREB regulated transcription coactivator 1
chr8_+_68526093 Show fit	0.05	ENSRNOT00000011385	Aagab Links NCBI RGD Ensembl Show fit	alpha- and gamma-adaptin binding protein
chrX_+_80213332 Show fit	0.05	ENSRNOT00000042827	Sh3bgrl Links NCBI RGD Ensembl Show fit	SH3 domain binding glutamate-rich protein like
chr5_-_19559244 Show fit	0.05	ENSRNOT00000014289 ENSRNOT00000089666	Nsmaf Links NCBI RGD Ensembl Show fit	neutral sphingomyelinase activation associated factor
chr4_-_153593773 Show fit	0.05	ENSRNOT00000082982	Mical3 Links NCBI RGD Ensembl Show fit	microtubule associated monooxygenase, calponin and LIM domain containing 3
chr3_-_7796385 Show fit	0.05	ENSRNOT00000082489	Ntng2 Links NCBI RGD Ensembl Show fit	netrin G2
chr13_+_52662996 Show fit	0.05	ENSRNOT00000047682	Tnnt2 Links NCBI RGD Ensembl Show fit	troponin T2, cardiac type
chr7_-_121029754 Show fit	0.05	ENSRNOT00000004703	Nptxr Links NCBI RGD Ensembl Show fit	neuronal pentraxin receptor
chr1_-_215846911 Show fit	0.05	ENSRNOT00000089171	Igf2 Links NCBI RGD Ensembl Show fit	insulin-like growth factor 2
chr13_+_34400170 Show fit	0.05	ENSRNOT00000061516 ENSRNOT00000061515 ENSRNOT00000061513 ENSRNOT00000084506 ENSRNOT00000086641	Clasp1 Links NCBI RGD Ensembl Show fit	cytoplasmic linker associated protein 1
chr3_+_177164359 Show fit	0.05	ENSRNOT00000066837	RGD1561282 Links NCBI RGD Ensembl Show fit	RGD1561282
chr5_+_58505500 Show fit	0.05	ENSRNOT00000043216	Unc13b Links NCBI RGD Ensembl Show fit	unc-13 homolog B
chr2_-_31753528 Show fit	0.05	ENSRNOT00000075057	Pik3r1 Links NCBI RGD Ensembl Show fit	phosphoinositide-3-kinase regulatory subunit 1
chr15_-_37383277 Show fit	0.05	ENSRNOT00000011711	Gjb2 Links NCBI RGD Ensembl Show fit	gap junction protein, beta 2
chr11_+_45888221 Show fit	0.05	ENSRNOT00000071932 ENSRNOT00000066008 ENSRNOT00000060802	Lnp1 Links NCBI RGD Ensembl Show fit	leukemia NUP98 fusion partner 1
chr10_-_55965216 Show fit	0.05	ENSRNOT00000057058	Chd3 Links NCBI RGD Ensembl Show fit	chromodomain helicase DNA binding protein 3
chr2_+_11658568 Show fit	0.05	ENSRNOT00000076408 ENSRNOT00000076416 ENSRNOT00000076992 ENSRNOT00000075931 ENSRNOT00000076136 ENSRNOT00000076481 ENSRNOT00000076084 ENSRNOT00000076230 ENSRNOT00000076710 ENSRNOT00000076239	Mef2c Links NCBI RGD Ensembl Show fit	myocyte enhancer factor 2C
chr7_-_140580783 Show fit	0.05	ENSRNOT00000087327	Dhh Links NCBI RGD Ensembl Show fit	desert hedgehog
chr1_+_278557792 Show fit	0.05	ENSRNOT00000023414	Atrnl1 Links NCBI RGD Ensembl Show fit	attractin like 1
chr10_+_89339029 Show fit	0.05	ENSRNOT00000031208	Rundc1 Links NCBI RGD Ensembl Show fit	RUN domain containing 1
chr3_+_11392791 Show fit	0.04	ENSRNOT00000064792	Ciz1 Links NCBI RGD Ensembl Show fit	CDKN1A interacting zinc finger protein 1
chr16_+_32457521 Show fit	0.04	ENSRNOT00000083579	Clcn3 Links NCBI RGD Ensembl Show fit	chloride voltage-gated channel 3
chrX_-_159841072 Show fit	0.04	ENSRNOT00000001158	Arhgef6 Links NCBI RGD Ensembl Show fit	Rac/Cdc42 guanine nucleotide exchange factor 6
chr1_+_248228496 Show fit	0.04	ENSRNOT00000015406	Uhrf2 Links NCBI RGD Ensembl Show fit	ubiquitin like with PHD and ring finger domains 2
chr14_-_112946204 Show fit	0.04	ENSRNOT00000056813	LOC103690141 Links NCBI RGD Ensembl Show fit	coiled-coil domain-containing protein 85A-like
chr5_-_153625869 Show fit	0.04	ENSRNOT00000024464	Clic4 Links NCBI RGD Ensembl Show fit	chloride intracellular channel 4
chr1_-_281874456 Show fit	0.04	ENSRNOT00000084760 ENSRNOT00000050617	Cacul1 Links NCBI RGD Ensembl Show fit	CDK2-associated, cullin domain 1
chr19_-_53688597 Show fit	0.04	ENSRNOT00000074448	Zcchc14 Links NCBI RGD Ensembl Show fit	zinc finger CCHC-type containing 14
chr4_-_117268178 Show fit	0.04	ENSRNOT00000043201 ENSRNOT00000084049	Fbxo41 Links NCBI RGD Ensembl Show fit	F-box protein 41
chr1_-_141188031 Show fit	0.04	ENSRNOT00000044567	Polg Links NCBI RGD Ensembl Show fit	DNA polymerase gamma, catalytic subunit
chr10_+_47019326 Show fit	0.04	ENSRNOT00000006984	Smcr8 Links NCBI RGD Ensembl Show fit	Smith-Magenis syndrome chromosome region, candidate 8
chr6_-_138508753 Show fit	0.04	ENSRNOT00000006888	Ighm Links NCBI RGD Ensembl Show fit	immunoglobulin heavy constant mu
chrX_+_70596901 Show fit	0.04	ENSRNOT00000088114	Dlg3 Links NCBI RGD Ensembl Show fit	discs large MAGUK scaffold protein 3
chr2_+_149494330 Show fit	0.04	ENSRNOT00000074764 ENSRNOT00000089865	Med12l Links NCBI RGD Ensembl Show fit	mediator complex subunit 12-like
chr1_+_255185629 Show fit	0.04	ENSRNOT00000083002	Hectd2 Links NCBI RGD Ensembl Show fit	HECT domain E3 ubiquitin protein ligase 2
chrX_+_82143789 Show fit	0.04	ENSRNOT00000003724	Pou3f4 Links NCBI RGD Ensembl Show fit	POU class 3 homeobox 4
chr11_-_88273254 Show fit	0.04	ENSRNOT00000002533	Mapk1 Links NCBI RGD Ensembl Show fit	mitogen activated protein kinase 1
chr2_+_210977938 Show fit	0.04	ENSRNOT00000074725	Amigo1 Links NCBI RGD Ensembl Show fit	adhesion molecule with Ig like domain 1
chr16_+_46731403 Show fit	0.04	ENSRNOT00000017624	Tenm3 Links NCBI RGD Ensembl Show fit	teneurin transmembrane protein 3
chr15_+_23792931 Show fit	0.04	ENSRNOT00000092091	Samd4a Links NCBI RGD Ensembl Show fit	sterile alpha motif domain containing 4A
chr3_-_107760550 Show fit	0.04	ENSRNOT00000077091 ENSRNOT00000051638	Meis2 Links NCBI RGD Ensembl Show fit	Meis homeobox 2
chr4_+_120672152 Show fit	0.04	ENSRNOT00000077231	Mgll Links NCBI RGD Ensembl Show fit	monoglyceride lipase
chr12_+_7081895 Show fit	0.04	ENSRNOT00000047163	Hmgb1 Links NCBI RGD Ensembl Show fit	high mobility group box 1
chrX_-_123515720 Show fit	0.04	ENSRNOT00000092343	Nkrf Links NCBI RGD Ensembl Show fit	NFKB repressing factor
chr2_-_140618405 Show fit	0.04	ENSRNOT00000017736	Setd7 Links NCBI RGD Ensembl Show fit	SET domain containing (lysine methyltransferase) 7
chr12_+_6403940 Show fit	0.04	ENSRNOT00000083484	B3glct Links NCBI RGD Ensembl Show fit	beta 3-glucosyltransferase
chr19_+_54060622 Show fit	0.04	ENSRNOT00000023607	Gse1 Links NCBI RGD Ensembl Show fit	Gse1 coiled-coil protein
chr2_+_198772937 Show fit	0.04	ENSRNOT00000028812	Itga10 Links NCBI RGD Ensembl Show fit	integrin subunit alpha 10
chr10_-_67751002 Show fit	0.04	ENSRNOT00000000254	RGD1310429 Links NCBI RGD Ensembl Show fit	similar to Protein Njmu-R1
chr3_-_110556808 Show fit	0.04	ENSRNOT00000092158 ENSRNOT00000045362	RGD1565536 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein
chr3_+_81134505 Show fit	0.04	ENSRNOT00000067664	Phf21a Links NCBI RGD Ensembl Show fit	PHD finger protein 21A
chr5_-_16140896 Show fit	0.04	ENSRNOT00000029503	Xkr4 Links NCBI RGD Ensembl Show fit	XK related 4
chr10_+_74959285 Show fit	0.04	ENSRNOT00000010296	Rnf43 Links NCBI RGD Ensembl Show fit	ring finger protein 43
chr13_+_89718066 Show fit	0.04	ENSRNOT00000005147	Dedd Links NCBI RGD Ensembl Show fit	death effector domain-containing
chr8_-_44327551 Show fit	0.04	ENSRNOT00000083939	Gramd1b Links NCBI RGD Ensembl Show fit	GRAM domain containing 1B
chr5_-_79874671 Show fit	0.04	ENSRNOT00000084563	Tnc Links NCBI RGD Ensembl Show fit	tenascin C
chr15_-_33752665 Show fit	0.04	ENSRNOT00000034102	Zfhx2 Links NCBI RGD Ensembl Show fit	zinc finger homeobox 2
chr8_-_62616828 Show fit	0.04	ENSRNOT00000068340	Arid3b Links NCBI RGD Ensembl Show fit	AT-rich interaction domain 3B
chr7_+_11383116 Show fit	0.04	ENSRNOT00000066348	Nmrk2 Links NCBI RGD Ensembl Show fit	nicotinamide riboside kinase 2
chr13_+_44475970 Show fit	0.04	ENSRNOT00000024602 ENSRNOT00000091645	Ccnt2 Links NCBI RGD Ensembl Show fit	cyclin T2
chr16_+_10727571 Show fit	0.04	ENSRNOT00000084422	Mmrn2 Links NCBI RGD Ensembl Show fit	multimerin 2
chr4_-_83137527 Show fit	0.04	ENSRNOT00000039580	Jazf1 Links NCBI RGD Ensembl Show fit	JAZF zinc finger 1
chr15_-_90175802 Show fit	0.04	ENSRNOT00000013342	Spry2 Links NCBI RGD Ensembl Show fit	sprouty RTK signaling antagonist 2
chr1_+_78800754 Show fit	0.04	ENSRNOT00000084601	Dact3 Links NCBI RGD Ensembl Show fit	dishevelled-binding antagonist of beta-catenin 3
chr2_+_196334626 Show fit	0.04	ENSRNOT00000050914 ENSRNOT00000028645 ENSRNOT00000090729	Sema6c Links NCBI RGD Ensembl Show fit	semaphorin 6C
chr3_+_79918969 Show fit	0.04	ENSRNOT00000016306	Spi1 Links NCBI RGD Ensembl Show fit	Spi-1 proto-oncogene
chr1_-_219544328 Show fit	0.04	ENSRNOT00000025847	Grk2 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor kinase 2
chr5_+_1417478 Show fit	0.04	ENSRNOT00000008153 ENSRNOT00000085564	Jph1 Links NCBI RGD Ensembl Show fit	junctophilin 1
chr20_-_5865775 Show fit	0.04	ENSRNOT00000000612 ENSRNOT00000092641	Srpk1 Links NCBI RGD Ensembl Show fit	SRSF protein kinase 1
chr1_-_277939039 Show fit	0.04	ENSRNOT00000079579 ENSRNOT00000086726	Ablim1 Links NCBI RGD Ensembl Show fit	actin-binding LIM protein 1
chr5_+_151362019 Show fit	0.04	ENSRNOT00000077083 ENSRNOT00000067801	Wasf2 Links NCBI RGD Ensembl Show fit	WAS protein family, member 2
chr18_+_32594958 Show fit	0.04	ENSRNOT00000018511	Spry4 Links NCBI RGD Ensembl Show fit	sprouty RTK signaling antagonist 4
chr10_-_31419235 Show fit	0.03	ENSRNOT00000059496	Cyfip2 Links NCBI RGD Ensembl Show fit	cytoplasmic FMR1 interacting protein 2
chr8_+_39960542 Show fit	0.03	ENSRNOT00000013370	Msantd2 Links NCBI RGD Ensembl Show fit	Myb/SANT-like DNA-binding domain containing 2
chr10_-_85435016 Show fit	0.03	ENSRNOT00000079921	4933428G20Rik Links NCBI RGD Ensembl Show fit	RIKEN cDNA 4933428G20 gene
chr19_+_784618 Show fit	0.03	ENSRNOT00000014749	Cmtm4 Links NCBI RGD Ensembl Show fit	CKLF-like MARVEL transmembrane domain containing 4
chr12_+_47590154 Show fit	0.03	ENSRNOT00000045946	Git2 Links NCBI RGD Ensembl Show fit	GIT ArfGAP 2
chr3_-_156340913 Show fit	0.03	ENSRNOT00000021452	Mafb Links NCBI RGD Ensembl Show fit	MAF bZIP transcription factor B
chr2_-_186245163 Show fit	0.03	ENSRNOT00000089339	Dclk2 Links NCBI RGD Ensembl Show fit	doublecortin-like kinase 2
chr8_-_96132634 Show fit	0.03	ENSRNOT00000041655	Syncrip Links NCBI RGD Ensembl Show fit	synaptotagmin binding, cytoplasmic RNA interacting protein
chr10_-_67285617 Show fit	0.03	ENSRNOT00000019044	Utp6 Links NCBI RGD Ensembl Show fit	UTP6 small subunit processome component
chrX_+_1297099 Show fit	0.03	ENSRNOT00000013522	Elk1 Links NCBI RGD Ensembl Show fit	ELK1, ETS transcription factor
chr8_+_27777179 Show fit	0.03	ENSRNOT00000009825	B3gat1 Links NCBI RGD Ensembl Show fit	beta-1,3-glucuronyltransferase 1
chr13_-_73558912 Show fit	0.03	ENSRNOT00000093655	Cep350 Links NCBI RGD Ensembl Show fit	centrosomal protein 350
chr1_+_154377447 Show fit	0.03	ENSRNOT00000084268 ENSRNOT00000092086 ENSRNOT00000091470 ENSRNOT00000025415	Picalm Links NCBI RGD Ensembl Show fit	phosphatidylinositol binding clathrin assembly protein
chr20_-_2701637 Show fit	0.03	ENSRNOT00000049667	Hspa1a Links NCBI RGD Ensembl Show fit	heat shock protein family A (Hsp70) member 1A
chr17_+_44758460 Show fit	0.03	ENSRNOT00000089436	Hist1h2an Links NCBI RGD Ensembl Show fit	histone cluster 1, H2an
chr3_-_72289310 Show fit	0.03	ENSRNOT00000038250	Rtn4rl2 Links NCBI RGD Ensembl Show fit	reticulon 4 receptor-like 2
chr7_-_98098268 Show fit	0.03	ENSRNOT00000010361	Fbxo32 Links NCBI RGD Ensembl Show fit	F-box protein 32
chrX_+_68774699 Show fit	0.03	ENSRNOT00000081662	Stard8 Links NCBI RGD Ensembl Show fit	StAR-related lipid transfer domain containing 8
chr16_+_19686630 Show fit	0.03	ENSRNOT00000081321	Myo9b Links NCBI RGD Ensembl Show fit	myosin IXb
chr15_+_61069581 Show fit	0.03	ENSRNOT00000084333	Vwa8 Links NCBI RGD Ensembl Show fit	von Willebrand factor A domain containing 8
chr11_-_90406797 Show fit	0.03	ENSRNOT00000073049	Snai2 Links NCBI RGD Ensembl Show fit	snail family transcriptional repressor 2

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.4	GO:2000969	positive regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity(GO:2000969)
0.0	0.2	GO:1900625	regulation of mast cell cytokine production(GO:0032763) regulation of monocyte aggregation(GO:1900623) positive regulation of monocyte aggregation(GO:1900625)
0.0	0.2	GO:0036309	protein localization to M-band(GO:0036309) protein localization to T-tubule(GO:0036371)
0.0	0.1	GO:1900451	positive regulation of glutamate receptor signaling pathway(GO:1900451)
0.0	0.1	GO:0043314	negative regulation of neutrophil degranulation(GO:0043314)
0.0	0.1	GO:0042668	auditory receptor cell fate determination(GO:0042668) negative regulation of pro-B cell differentiation(GO:2000974) negative regulation of forebrain neuron differentiation(GO:2000978)
0.0	0.1	GO:1901097	negative regulation of autophagosome maturation(GO:1901097)
0.0	0.1	GO:2000620	positive regulation of histone H4-K16 acetylation(GO:2000620)
0.0	0.2	GO:0098953	receptor diffusion trapping(GO:0098953) postsynaptic neurotransmitter receptor diffusion trapping(GO:0098970) NMDA selective glutamate receptor signaling pathway(GO:0098989) neurotransmitter receptor diffusion trapping(GO:0099628)
0.0	0.1	GO:0032423	regulation of mismatch repair(GO:0032423)
0.0	0.1	GO:0035408	histone H3-T6 phosphorylation(GO:0035408)
0.0	0.1	GO:2001013	epithelial cell proliferation involved in renal tubule morphogenesis(GO:2001013)
0.0	0.1	GO:0072218	ascending thin limb development(GO:0072021) metanephric ascending thin limb development(GO:0072218)
0.0	0.1	GO:0021882	regulation of transcription from RNA polymerase II promoter involved in forebrain neuron fate commitment(GO:0021882) commitment of multipotent stem cells to neuronal lineage in forebrain(GO:0021898)
0.0	0.1	GO:0034635	glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.0	0.1	GO:0090038	negative regulation of protein kinase C signaling(GO:0090038)
0.0	0.1	GO:1990573	potassium ion import across plasma membrane(GO:1990573)
0.0	0.1	GO:0014722	regulation of skeletal muscle contraction by calcium ion signaling(GO:0014722)
0.0	0.1	GO:2001226	negative regulation of chloride transport(GO:2001226)
0.0	0.1	GO:1904722	positive regulation of mRNA cleavage(GO:0031439) positive regulation of endoribonuclease activity(GO:1902380) positive regulation of mRNA endonucleolytic cleavage involved in unfolded protein response(GO:1904722)
0.0	0.2	GO:1903715	regulation of aerobic respiration(GO:1903715)
0.0	0.1	GO:0021586	pons maturation(GO:0021586)
0.0	0.1	GO:0071691	cardiac muscle thin filament assembly(GO:0071691)
0.0	0.1	GO:0033564	anterior/posterior axon guidance(GO:0033564)
0.0	0.1	GO:0031179	peptide modification(GO:0031179)
0.0	0.1	GO:1904879	positive regulation of calcium ion transmembrane transport via high voltage-gated calcium channel(GO:1904879)
0.0	0.1	GO:1901143	insulin catabolic process(GO:1901143)
0.0	0.2	GO:0021942	radial glia guided migration of Purkinje cell(GO:0021942)
0.0	0.1	GO:2000328	regulation of memory T cell differentiation(GO:0043380) positive regulation of memory T cell differentiation(GO:0043382) regulation of NK T cell proliferation(GO:0051140) positive regulation of NK T cell proliferation(GO:0051142) regulation of T-helper 17 cell lineage commitment(GO:2000328)
0.0	0.1	GO:1904204	regulation of skeletal muscle hypertrophy(GO:1904204)
0.0	0.1	GO:2000041	regulation of midbrain dopaminergic neuron differentiation(GO:1904956) regulation of planar cell polarity pathway involved in axis elongation(GO:2000040) negative regulation of planar cell polarity pathway involved in axis elongation(GO:2000041)
0.0	0.1	GO:0007172	signal complex assembly(GO:0007172)
0.0	0.1	GO:1900275	negative regulation of phospholipase C activity(GO:1900275)
0.0	0.1	GO:1903999	negative regulation of eating behavior(GO:1903999)
0.0	0.1	GO:0035542	regulation of SNARE complex assembly(GO:0035542)
0.0	0.0	GO:0032972	regulation of muscle filament sliding speed(GO:0032972)
0.0	0.0	GO:0030908	intein-mediated protein splicing(GO:0016539) protein splicing(GO:0030908)
0.0	0.0	GO:0032298	positive regulation of DNA-dependent DNA replication initiation(GO:0032298)
0.0	0.1	GO:0099525	presynaptic dense core granule exocytosis(GO:0099525)
0.0	0.0	GO:1903760	regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization(GO:1903760)
0.0	0.0	GO:0000189	MAPK import into nucleus(GO:0000189) diadenosine polyphosphate biosynthetic process(GO:0015960) diadenosine tetraphosphate metabolic process(GO:0015965) diadenosine tetraphosphate biosynthetic process(GO:0015966)
0.0	0.1	GO:0071896	protein localization to adherens junction(GO:0071896)
0.0	0.1	GO:1902630	regulation of membrane hyperpolarization(GO:1902630)
0.0	0.0	GO:0060447	bud outgrowth involved in lung branching(GO:0060447)
0.0	0.0	GO:0019086	late viral transcription(GO:0019086)
0.0	0.0	GO:0090370	negative regulation of cholesterol efflux(GO:0090370)
0.0	0.1	GO:0090274	positive regulation of somatostatin secretion(GO:0090274)
0.0	0.1	GO:0060023	soft palate development(GO:0060023)
0.0	0.1	GO:0001661	conditioned taste aversion(GO:0001661)
0.0	0.0	GO:0097401	synaptic vesicle lumen acidification(GO:0097401)
0.0	0.0	GO:0000414	regulation of histone H3-K36 methylation(GO:0000414)
0.0	0.0	GO:0070563	cell migration involved in endocardial cushion formation(GO:0003273) negative regulation of vitamin D receptor signaling pathway(GO:0070563)
0.0	0.0	GO:1902809	regulation of skeletal muscle fiber differentiation(GO:1902809)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0099524	region of cytosol(GO:0099522) postsynaptic cytosol(GO:0099524)
0.0	0.1	GO:0016533	cyclin-dependent protein kinase 5 holoenzyme complex(GO:0016533)
0.0	0.1	GO:0098855	HCN channel complex(GO:0098855)
0.0	0.1	GO:0005943	phosphatidylinositol 3-kinase complex, class IA(GO:0005943)
0.0	0.1	GO:0044305	calyx of Held(GO:0044305)
0.0	0.1	GO:0071149	TEAD-2-YAP complex(GO:0071149)
0.0	0.0	GO:0005760	gamma DNA polymerase complex(GO:0005760)
0.0	0.2	GO:0030130	clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.0	0.1	GO:1990393	3M complex(GO:1990393)
0.0	0.0	GO:1990584	cardiac Troponin complex(GO:1990584)
0.0	0.0	GO:0031592	centrosomal corona(GO:0031592)
0.0	0.0	GO:0014701	junctional sarcoplasmic reticulum membrane(GO:0014701)
0.0	0.0	GO:0097025	MPP7-DLG1-LIN7 complex(GO:0097025)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0035403	histone kinase activity (H3-T6 specific)(GO:0035403)
0.0	0.1	GO:0051377	mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.0	0.1	GO:0060002	plus-end directed microfilament motor activity(GO:0060002)
0.0	0.1	GO:0031826	type 2A serotonin receptor binding(GO:0031826)
0.0	0.1	GO:0005042	netrin receptor activity(GO:0005042)
0.0	0.2	GO:0030160	GKAP/Homer scaffold activity(GO:0030160)
0.0	0.1	GO:0031249	denatured protein binding(GO:0031249)
0.0	0.1	GO:0016715	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen(GO:0016715) amidine-lyase activity(GO:0016842)
0.0	0.1	GO:0045159	myosin II binding(GO:0045159)
0.0	0.0	GO:0016230	sphingomyelin phosphodiesterase activator activity(GO:0016230)
0.0	0.1	GO:0019992	diacylglycerol binding(GO:0019992)
0.0	0.0	GO:0001847	opsonin receptor activity(GO:0001847)
0.0	0.2	GO:0009931	calcium-dependent protein serine/threonine kinase activity(GO:0009931)
0.0	0.0	GO:0072320	volume-sensitive chloride channel activity(GO:0072320)
0.0	0.1	GO:0043559	insulin binding(GO:0043559)
0.0	0.1	GO:0004690	cyclic nucleotide-dependent protein kinase activity(GO:0004690)
0.0	0.0	GO:0030172	troponin C binding(GO:0030172)
0.0	0.1	GO:0003680	AT DNA binding(GO:0003680)
0.0	0.1	GO:0008432	JUN kinase binding(GO:0008432)
0.0	0.1	GO:0070290	N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0	0.0	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.0	0.0	GO:0042799	histone methyltransferase activity (H4-K20 specific)(GO:0042799)
0.0	0.1	GO:0015467	G-protein activated inward rectifier potassium channel activity(GO:0015467)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	PID NETRIN PATHWAY	Netrin-mediated signaling events