Project
GSE49485: Hypoxia transcriptome sequencing of rat brain.
Navigation
Downloads
Results for Meis2
Z-value: 0.39
Motif logo
Transcription factors associated with Meis2
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Meis2 | rn6_v1_chr3_-_107760550_107760589 | 0.94 | 1.8e-02 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr13_-_52266100 Show fit | 0.27 |
ENSRNOT00000087532
|
|
|
| chr11_-_88180542 Show fit | 0.17 |
ENSRNOT00000002539
|
yippee-like 1 |
|
| chr2_-_178521038 Show fit | 0.16 |
ENSRNOT00000033107
|
relaxin/insulin-like family peptide receptor 1 |
|
| chr7_+_20462081 Show fit | 0.16 |
ENSRNOT00000088383
|
|
|
| chr13_+_113373578 Show fit | 0.14 |
ENSRNOT00000009900
|
plexin A2 |
|
| chr5_+_8459660 Show fit | 0.13 |
ENSRNOT00000007491
|
carboxypeptidase A6 |
|
| chr5_+_118574801 Show fit | 0.12 |
ENSRNOT00000035949
|
ubiquitin-conjugating enzyme E2U (putative) |
|
| chr11_+_45888221 Show fit | 0.11 |
ENSRNOT00000071932
ENSRNOT00000066008 ENSRNOT00000060802 |
leukemia NUP98 fusion partner 1 |
|
| chr13_-_82129989 Show fit | 0.11 |
ENSRNOT00000078963
|
|
|
| chr7_+_20262680 Show fit | 0.11 |
ENSRNOT00000046378
|
similar to hypothetical protein 4930509O22 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Meis2
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.2 | GO:0002380 | immunoglobulin secretion involved in immune response(GO:0002380) |
| 0.0 | 0.1 | GO:1901423 | response to benzene(GO:1901423) |
| 0.0 | 0.1 | GO:0071529 | cementum mineralization(GO:0071529) |
| 0.0 | 0.1 | GO:0071350 | monocyte extravasation(GO:0035696) interleukin-12-mediated signaling pathway(GO:0035722) interleukin-15-mediated signaling pathway(GO:0035723) cellular response to interleukin-12(GO:0071349) cellular response to interleukin-15(GO:0071350) |
| 0.0 | 0.1 | GO:0071314 | cellular response to cocaine(GO:0071314) |
| 0.0 | 0.1 | GO:2000418 | positive regulation of eosinophil migration(GO:2000418) |
| 0.0 | 0.1 | GO:0060174 | limb bud formation(GO:0060174) |
| 0.0 | 0.1 | GO:0006880 | intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577) |
| 0.0 | 0.1 | GO:0061590 | calcium activated phospholipid scrambling(GO:0061588) calcium activated phosphatidylcholine scrambling(GO:0061590) calcium activated galactosylceramide scrambling(GO:0061591) |
| 0.0 | 0.1 | GO:1903575 | cornified envelope assembly(GO:1903575) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0033503 | HULC complex(GO:0033503) |
| 0.0 | 0.1 | GO:1990682 | CSF1-CSF1R complex(GO:1990682) |
| 0.0 | 0.1 | GO:0000120 | RNA polymerase I transcription factor complex(GO:0000120) |
| 0.0 | 0.0 | GO:0044302 | dentate gyrus mossy fiber(GO:0044302) |
| 0.0 | 0.0 | GO:0032937 | SREBP-SCAP-Insig complex(GO:0032937) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0001641 | group II metabotropic glutamate receptor activity(GO:0001641) |
| 0.0 | 0.1 | GO:0004995 | tachykinin receptor activity(GO:0004995) |
| 0.0 | 0.1 | GO:0042015 | interleukin-20 binding(GO:0042015) |
| 0.0 | 0.1 | GO:0051431 | corticotropin-releasing hormone receptor 2 binding(GO:0051431) |
| 0.0 | 0.1 | GO:0005173 | stem cell factor receptor binding(GO:0005173) |
| 0.0 | 0.1 | GO:0046976 | histone methyltransferase activity (H3-K27 specific)(GO:0046976) |
| 0.0 | 0.0 | GO:0016748 | succinyltransferase activity(GO:0016748) |
| 0.0 | 0.0 | GO:0008481 | sphinganine kinase activity(GO:0008481) |
| 0.0 | 0.0 | GO:0015141 | succinate transmembrane transporter activity(GO:0015141) |
| 0.0 | 0.0 | GO:0004830 | tryptophan-tRNA ligase activity(GO:0004830) |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |