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GSE49485: Hypoxia transcriptome sequencing of rat brain.
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Results for Meis1
Z-value: 0.41
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Transcription factors associated with Meis1
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Meis1 | rn6_v1_chr14_-_103321270_103321270 | -0.27 | 6.6e-01 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr17_+_43357888 Show fit | 0.48 |
ENSRNOT00000022329
|
secretagogin, EF-hand calcium binding protein |
|
| chr3_-_165039707 Show fit | 0.15 |
ENSRNOT00000081648
|
potassium voltage-gated channel modifier subfamily G member 1 |
|
| chr3_+_64190973 Show fit | 0.15 |
ENSRNOT00000011342
|
|
|
| chr7_+_133856101 Show fit | 0.13 |
ENSRNOT00000038686
|
PDZ domain containing RING finger 4 |
|
| chr7_-_124929025 Show fit | 0.12 |
ENSRNOT00000015447
|
EF-hand calcium binding domain 6 |
|
| chr7_-_95669809 Show fit | 0.12 |
ENSRNOT00000006423
|
syntrophin, beta 1 |
|
| chr7_+_20462081 Show fit | 0.11 |
ENSRNOT00000088383
|
|
|
| chr17_-_51912496 Show fit | 0.11 |
ENSRNOT00000019272
|
inhibin beta A subunit |
|
| chr17_-_89163113 Show fit | 0.11 |
ENSRNOT00000050445
|
ribosomal protein S19-like |
|
| chr1_-_166912524 Show fit | 0.10 |
ENSRNOT00000092952
|
inositol polyphosphate phosphatase-like 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Meis1
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:1902259 | regulation of delayed rectifier potassium channel activity(GO:1902259) |
| 0.0 | 0.2 | GO:0010248 | establishment or maintenance of transmembrane electrochemical gradient(GO:0010248) |
| 0.0 | 0.1 | GO:0060279 | positive regulation of ovulation(GO:0060279) |
| 0.0 | 0.1 | GO:0060066 | oviduct development(GO:0060066) |
| 0.0 | 0.1 | GO:0014739 | positive regulation of muscle hyperplasia(GO:0014739) |
| 0.0 | 0.1 | GO:0033364 | mast cell secretory granule organization(GO:0033364) |
| 0.0 | 0.1 | GO:0000821 | regulation of arginine metabolic process(GO:0000821) negative regulation of nitric oxide mediated signal transduction(GO:0010751) negative regulation of cellular amino acid metabolic process(GO:0045763) |
| 0.0 | 0.1 | GO:0034224 | cellular response to zinc ion starvation(GO:0034224) |
| 0.0 | 0.1 | GO:0060931 | sinoatrial node cell development(GO:0060931) |
| 0.0 | 0.1 | GO:1900158 | negative regulation of bone mineralization involved in bone maturation(GO:1900158) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:0043511 | inhibin complex(GO:0043511) |
| 0.0 | 0.1 | GO:1990682 | CSF1-CSF1R complex(GO:1990682) |
| 0.0 | 0.1 | GO:0005607 | laminin-2 complex(GO:0005607) |
| 0.0 | 0.0 | GO:0032937 | SREBP-SCAP-Insig complex(GO:0032937) |
| 0.0 | 0.0 | GO:1990907 | Scrib-APC-beta-catenin complex(GO:0034750) beta-catenin-TCF complex(GO:1990907) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0005391 | sodium:potassium-exchanging ATPase activity(GO:0005391) |
| 0.0 | 0.1 | GO:0070699 | type II activin receptor binding(GO:0070699) |
| 0.0 | 0.1 | GO:0004995 | tachykinin receptor activity(GO:0004995) |
| 0.0 | 0.1 | GO:0042015 | interleukin-20 binding(GO:0042015) |
| 0.0 | 0.1 | GO:0031433 | telethonin binding(GO:0031433) |
| 0.0 | 0.1 | GO:0050833 | pyruvate transmembrane transporter activity(GO:0050833) |
| 0.0 | 0.1 | GO:0030297 | transmembrane receptor protein tyrosine kinase activator activity(GO:0030297) |
| 0.0 | 0.1 | GO:0004445 | inositol-polyphosphate 5-phosphatase activity(GO:0004445) |
| 0.0 | 0.0 | GO:0004591 | oxoglutarate dehydrogenase (succinyl-transferring) activity(GO:0004591) |
| 0.0 | 0.0 | GO:0001011 | transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087) |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | REACTOME GLYCOPROTEIN HORMONES | Genes involved in Glycoprotein hormones |