ISMARA results: Mafa

Project

GSE49485: Hypoxia transcriptome sequencing of rat brain.

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Results for Mafa

Z-value: 0.40

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Transcription factors associated with Mafa

Gene Symbol	Gene ID	Gene Info
Mafa NCBI RGD Ensembl	ENSRNOG00000007668	MAF bZIP transcription factor A

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Mafa	rn6_v1_chr7_-_116781766_116781766	-0.24	7.0e-01	Click!

Activity profile of Mafa motif

Sorted Z-values of Mafa motif

Top targets:

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_-_145931583 Show fit	0.17	ENSRNOT00000016433	Cfap161 NCBI RGD Ensembl Show fit	cilia and flagella associated protein 161
chr10_+_14828597 Show fit	0.16	ENSRNOT00000025434	Tekt4 NCBI RGD Ensembl Show fit	tektin 4
chr15_+_50891127 Show fit	0.13	ENSRNOT00000020728	Stc1 NCBI RGD Ensembl Show fit	stanniocalcin 1
chrX_-_111102464 Show fit	0.13	ENSRNOT00000084176	Ripply1 NCBI RGD Ensembl Show fit	ripply transcriptional repressor 1
chr10_-_46145548 Show fit	0.12	ENSRNOT00000033483	Pld6 NCBI RGD Ensembl Show fit	phospholipase D family, member 6
chr20_-_12938891 Show fit	0.12	ENSRNOT00000017141	RGD1564149 NCBI RGD Ensembl Show fit	similar to Protein C21orf58
chr2_-_187160373 Show fit	0.10	ENSRNOT00000018961	Ntrk1 NCBI RGD Ensembl Show fit	neurotrophic receptor tyrosine kinase 1
chr15_-_61873406 Show fit	0.09	ENSRNOT00000045115	LOC100360244 NCBI RGD Ensembl Show fit	LRRGT00053-like
chr6_+_102392828 Show fit	0.09	ENSRNOT00000089162	Rdh12 NCBI RGD Ensembl Show fit	retinol dehydrogenase 12 (all-trans/9-cis/11-cis)
chr1_-_254735548 Show fit	0.09	ENSRNOT00000025258	Ankrd1 NCBI RGD Ensembl Show fit	ankyrin repeat domain 1

Showing 1 to 10 of 80 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of Mafa

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Total log-likelihood	Term	Description
0.2	GO:0080154	regulation of fertilization(GO:0080154)
0.1	GO:0008358	oocyte construction(GO:0007308) oocyte axis specification(GO:0007309) oocyte anterior/posterior axis specification(GO:0007314) pole plasm assembly(GO:0007315) maternal determination of anterior/posterior axis, embryo(GO:0008358) P granule organization(GO:0030719)
0.1	GO:0033861	negative regulation of NAD(P)H oxidase activity(GO:0033861)
0.1	GO:0014707	branchiomeric skeletal muscle development(GO:0014707)
0.1	GO:0061368	behavioral response to chemical pain(GO:0061366) behavioral response to formalin induced pain(GO:0061368)
0.1	GO:1903596	regulation of gap junction assembly(GO:1903596)
0.1	GO:0034436	glycoprotein transport(GO:0034436)
0.1	GO:0032525	somite rostral/caudal axis specification(GO:0032525)
0.1	GO:0001886	endothelial cell morphogenesis(GO:0001886)
0.0	GO:0060672	epithelial cell differentiation involved in embryonic placenta development(GO:0060671) epithelial cell morphogenesis involved in placental branching(GO:0060672)

Showing 1 to 10 of 11 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:0016533	cyclin-dependent protein kinase 5 holoenzyme complex(GO:0016533)

Showing 1 to 1 of 1 entries

Gene overrepresentation in molecular function category:

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Total log-likelihood	Term	Description
0.1	GO:0031711	bradykinin receptor binding(GO:0031711) metallodipeptidase activity(GO:0070573)
0.1	GO:0005030	neurotrophin receptor activity(GO:0005030)
0.1	GO:0034437	glycoprotein transporter activity(GO:0034437)

Showing 1 to 3 of 3 entries

Results for Mafa

Z-value: 0.40

Motif logo

Transcription factors associated with Mafa

Activity-expression correlation:

Activity profile of Mafa motif

Sorted Z-values of Mafa motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of Mafa

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: