Project

GSE49485: Hypoxia transcriptome sequencing of rat brain.

Navigation
Downloads

Results for Lhx8

Z-value: 0.43

Motif logo

Transcription factors associated with Lhx8

Gene Symbol Gene ID Gene Info
ENSRNOG00000028348 LIM homeobox 8

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
Lhx8rn6_v1_chr2_-_260596777_260596777-0.474.3e-01Click!

Activity profile of Lhx8 motif

Sorted Z-values of Lhx8 motif

Promoter Log-likelihood Transcript Gene Gene Info
chr1_-_48891130 0.26 ENSRNOT00000083884

chr2_-_147819335 0.14 ENSRNOT00000057909
ankyrin repeat and ubiquitin domain containing 1
chr1_+_64740487 0.14 ENSRNOT00000081213
zinc finger protein 679-like
chr15_-_44442875 0.13 ENSRNOT00000017939
gonadotropin releasing hormone 1
chr5_+_6373583 0.13 ENSRNOT00000084749

chr7_-_82059247 0.11 ENSRNOT00000087177
R-spondin 2
chr1_-_49844547 0.11 ENSRNOT00000086127
ENSRNOT00000077423
ENSRNOT00000089439
ENSRNOT00000090521

chr7_-_40316532 0.10 ENSRNOT00000083347
similar to RIKEN cDNA C430008C19
chr2_-_170460754 0.10 ENSRNOT00000013009
SLIT and NTRK-like family, member 3
chr10_+_65552897 0.09 ENSRNOT00000056217
sperm associated antigen 5
chr7_-_129919946 0.09 ENSRNOT00000079976

chrM_+_9870 0.09 ENSRNOT00000044582
mitochondrially encoded NADH 4L dehydrogenase
chr9_-_38495126 0.09 ENSRNOT00000016933
ENSRNOT00000090385
RAB23, member RAS oncogene family
chr6_-_105160470 0.09 ENSRNOT00000008367
a disintegrin and metalloprotease domain 4
chr11_-_70499200 0.09 ENSRNOT00000002439
solute carrier family 12, member 8
chr16_+_18648866 0.09 ENSRNOT00000014862
DPY30 domain containing 1
chr15_-_45947030 0.08 ENSRNOT00000035888
integrator complex subunit 6
chr16_-_49820235 0.08 ENSRNOT00000029628
sorbin and SH3 domain containing 2
chr2_-_86475096 0.07 ENSRNOT00000075247
ENSRNOT00000075062
zinc finger protein 43-like
chr1_-_71373605 0.07 ENSRNOT00000034854
galanin-like peptide
chr4_-_159192526 0.07 ENSRNOT00000026731
potassium voltage-gated channel subfamily A member 1
chr11_+_38727048 0.07 ENSRNOT00000081537
zinc finger protein 260-like
chr2_+_235738416 0.07 ENSRNOT00000074209
ethanolamine-phosphate phospho-lyase
chr16_-_3765917 0.07 ENSRNOT00000088284
double homeobox B-like 1
chr4_-_150506557 0.07 ENSRNOT00000076927
zinc finger protein 248
chr3_+_48106099 0.06 ENSRNOT00000007218
solute carrier family 4 member 10
chr6_-_76608864 0.06 ENSRNOT00000010824
Ral GTPase activating protein catalytic alpha subunit 1
chr17_+_78915604 0.06 ENSRNOT00000057855
ribonuclease P/MRP 38 subunit
chr1_+_42169501 0.06 ENSRNOT00000025477
ENSRNOT00000092791
vasoactive intestinal peptide
chr5_-_164648328 0.06 ENSRNOT00000090811
zinc finger protein 933
chr12_-_5773036 0.06 ENSRNOT00000041365
FRY microtubule binding protein
chr16_-_54450426 0.06 ENSRNOT00000014623
platelet-derived growth factor receptor-like
chr2_+_211546560 0.06 ENSRNOT00000033443
AKNA domain containing 1
chr1_-_282492912 0.06 ENSRNOT00000047883

chr1_+_221710670 0.06 ENSRNOT00000064798
mitogen activated protein kinase kinase kinase kinase 2
chr4_+_70252366 0.06 ENSRNOT00000073039
cell adhesion molecule L1-like
chrM_+_8599 0.05 ENSRNOT00000049683
mitochondrially encoded cytochrome C oxidase III
chr9_-_65442257 0.05 ENSRNOT00000037660
family with sequence similarity 126, member B
chr14_+_34354503 0.05 ENSRNOT00000002941
neuromedin U
chr8_-_48582353 0.05 ENSRNOT00000011582
PDZ domain containing 3
chr4_-_150506406 0.05 ENSRNOT00000076307
zinc finger protein 248
chr2_-_30634243 0.05 ENSRNOT00000077537
MARVEL domain containing 2
chr6_+_9790422 0.05 ENSRNOT00000020959
protein kinase C, epsilon
chrM_+_9451 0.05 ENSRNOT00000041241
mitochondrially encoded NADH dehydrogenase 3
chr5_-_168123030 0.05 ENSRNOT00000092747
period circadian clock 3
chr20_+_4043741 0.05 ENSRNOT00000000525
RT1 class II, locus Bb
chr4_+_123760743 0.05 ENSRNOT00000013498
coiled-coil domain containing 174
chr8_-_48597867 0.05 ENSRNOT00000077958
NLR family member X1
chr18_-_1828606 0.05 ENSRNOT00000033312
establishment of sister chromatid cohesion N-acetyltransferase 1
chr5_-_16140896 0.05 ENSRNOT00000029503
XK related 4
chr7_+_132378273 0.05 ENSRNOT00000010990
hypothetical protein LOC690142
chr7_-_15301382 0.05 ENSRNOT00000081512
zinc finger protein 763
chr17_+_34665872 0.04 ENSRNOT00000092101
ENSRNOT00000085704
exocyst complex component 2
chr3_+_51687809 0.04 ENSRNOT00000087242
sodium voltage-gated channel alpha subunit 2
chr11_-_71136673 0.04 ENSRNOT00000042240
forty-two-three domain containing 1
chr3_-_2584523 0.04 ENSRNOT00000017373
UDP-N-acetylglucosamine pyrophosphorylase 1 like 1
chr9_-_81772851 0.04 ENSRNOT00000032719
ubiquitin specific peptidase 37
chr2_-_22105710 0.04 ENSRNOT00000017705
zinc finger FYVE-type containing 16
chr1_-_73399377 0.04 ENSRNOT00000038898
leukocyte immunoglobulin like receptor B4
chr2_+_72006099 0.04 ENSRNOT00000034044
cadherin 12
chr7_+_29909120 0.04 ENSRNOT00000049362

chr7_+_2831004 0.04 ENSRNOT00000029778
ring finger protein 41
chr15_-_93868292 0.04 ENSRNOT00000093546
ENSRNOT00000014583
MYC binding protein 2, E3 ubiquitin protein ligase
chr2_+_200076054 0.04 ENSRNOT00000025327
SEC22 homolog B, vesicle trafficking protein
chr1_+_218466289 0.04 ENSRNOT00000017948
MAS related GPR family member F
chr10_-_52290657 0.04 ENSRNOT00000005293
mitogen activated protein kinase kinase 4
chr9_+_65110330 0.03 ENSRNOT00000033068
ENSRNOT00000092868
aldehyde oxidase 4
chr12_+_12649861 0.03 ENSRNOT00000092402
CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated
chr1_-_67094567 0.03 ENSRNOT00000073583

chr12_+_16899025 0.03 ENSRNOT00000001716
proteasome assembly chaperone 3
chr6_-_99870024 0.03 ENSRNOT00000010043
RAB15, member RAS oncogene family
chr1_-_263885169 0.03 ENSRNOT00000030782
conserved helix-loop-helix ubiquitous kinase
chr1_-_169456098 0.03 ENSRNOT00000030827
tripartite motif-containing 30C
chr1_+_22364551 0.03 ENSRNOT00000043157
trace amine-associated receptor 8a
chr1_+_204959174 0.03 ENSRNOT00000023257
zinc finger RANBP2-type containing 1
chr1_-_22404002 0.03 ENSRNOT00000044098
trace amine-associated receptor 8a
chr13_-_47154292 0.03 ENSRNOT00000005284
CD55 molecule, decay accelerating factor for complement
chr1_-_247476827 0.03 ENSRNOT00000021298
insulin-like 6
chr2_-_181531978 0.03 ENSRNOT00000072029
neuropeptide Y receptor Y2
chr8_+_13862651 0.03 ENSRNOT00000014605
TATA-box binding protein associated factor, RNA polymerase I subunit D
chr3_-_105470475 0.03 ENSRNOT00000011078
gap junction protein, delta 2
chr4_+_69386698 0.03 ENSRNOT00000091655
T cell receptor beta, variable 13-2
chr1_-_62114672 0.03 ENSRNOT00000072607

chr7_+_116671948 0.02 ENSRNOT00000077773
ENSRNOT00000029711
GLI family zinc finger 4
chr11_-_87977368 0.02 ENSRNOT00000002546
transmembrane protein 191C
chr2_-_38110567 0.02 ENSRNOT00000072212
importin 11
chr11_+_74834050 0.02 ENSRNOT00000002333
ATPase 13A4
chrX_-_915953 0.02 ENSRNOT00000075264
sperm acrosome associated 5
chr16_+_32457521 0.02 ENSRNOT00000083579
chloride voltage-gated channel 3
chrX_+_71540895 0.02 ENSRNOT00000004692
ENSRNOT00000082967
O-linked N-acetylglucosamine (GlcNAc) transferase
chr6_+_43234526 0.02 ENSRNOT00000086808
ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
chr6_+_136004214 0.02 ENSRNOT00000013695
eukaryotic translation initiation factor 5
chr5_+_144581427 0.02 ENSRNOT00000015227
claspin
chrX_-_13601069 0.02 ENSRNOT00000004686
ornithine carbamoyltransferase
chr7_-_130408187 0.02 ENSRNOT00000015374
choline kinase beta
chr1_-_167884690 0.02 ENSRNOT00000091372
olfactory receptor 61
chr9_+_79659251 0.02 ENSRNOT00000021656
X-ray repair cross complementing 5
chr12_-_38274036 0.02 ENSRNOT00000063990
kinetochore associated 1
chr7_-_15852930 0.02 ENSRNOT00000009270
similar to zinc finger protein 101
chr2_-_258997138 0.02 ENSRNOT00000045020
ENSRNOT00000042256
adhesion G protein-coupled receptor L2
chr2_-_18531210 0.02 ENSRNOT00000088313
versican
chr4_-_71227872 0.02 ENSRNOT00000050392
TRPM8 channel-associated factor 2
chr16_+_35934970 0.02 ENSRNOT00000084707
ENSRNOT00000016474
polypeptide N-acetylgalactosaminyltransferase 7
chrM_+_7919 0.02 ENSRNOT00000046108
mitochondrially encoded ATP synthase 6
chr2_-_57935334 0.02 ENSRNOT00000022319
ENSRNOT00000085599
ENSRNOT00000077790
ENSRNOT00000035821
solute carrier family 1 member 3
chr7_+_130308532 0.02 ENSRNOT00000011941
myo-inositol oxygenase
chr2_+_225570721 0.02 ENSRNOT00000017076
Rho GTPase activating protein 29
chr1_-_55895636 0.02 ENSRNOT00000029537
vomeronasal 2 receptor, 9
chr3_-_173944396 0.02 ENSRNOT00000079019
synaptonemal complex protein 2
chrX_-_29825439 0.02 ENSRNOT00000048155
gem (nuclear organelle) associated protein 8
chr4_+_2593876 0.02 ENSRNOT00000092992
ubiquitin protein ligase E3C
chr12_-_12782139 0.02 ENSRNOT00000001392
ENSRNOT00000079836
eukaryotic translation initiation factor 2 alpha kinase 1
chr7_+_121361415 0.02 ENSRNOT00000067904
TGF-beta activated kinase 1/MAP3K7 binding protein 1
chr13_+_82355471 0.02 ENSRNOT00000030677
selectin E
chr1_+_152072665 0.02 ENSRNOT00000022538
RAB38, member RAS oncogene family
chr5_+_113592919 0.02 ENSRNOT00000011336
intraflagellar transport 74
chr13_+_82355886 0.02 ENSRNOT00000076757
selectin E
chr18_+_27047382 0.02 ENSRNOT00000027691
ENSRNOT00000090264
APC, WNT signaling pathway regulator
chr10_+_90230711 0.02 ENSRNOT00000055185
transmembrane and ubiquitin-like domain containing 2
chr16_-_23156962 0.02 ENSRNOT00000018543
SH2 domain containing 4A
chr3_-_38090526 0.01 ENSRNOT00000059430
calcium voltage-gated channel auxiliary subunit beta 4
chr9_+_16702460 0.01 ENSRNOT00000061432
protein tyrosine kinase 7
chr3_+_17889972 0.01 ENSRNOT00000073021

chr18_+_86299463 0.01 ENSRNOT00000058152
CD226 molecule
chr6_+_28515025 0.01 ENSRNOT00000088033
ENSRNOT00000005317
ENSRNOT00000081141
DnaJ heat shock protein family (Hsp40) member C27
chr8_+_52127632 0.01 ENSRNOT00000079797
cell adhesion molecule 1
chr12_-_10335499 0.01 ENSRNOT00000071567
WAS protein family, member 3
chr1_-_204087001 0.01 ENSRNOT00000051853
carboxypeptidase X (M14 family), member 2
chr1_-_167893061 0.01 ENSRNOT00000049401
olfactory receptor 60
chr10_-_64341066 0.01 ENSRNOT00000082825
ENSRNOT00000010010
VPS53 GARP complex subunit
chr16_+_8211420 0.01 ENSRNOT00000079609
oxidoreductase NAD-binding domain containing 1
chr18_-_36579403 0.01 ENSRNOT00000025284
leucyl-tRNA synthetase
chr1_-_261371508 0.01 ENSRNOT00000019978
arginine vasopressin-induced 1
chrX_-_2657155 0.01 ENSRNOT00000005630
carbohydrate sulfotransferase 7
chr4_-_51598771 0.01 ENSRNOT00000008325
NADH:ubiquinone oxidoreductase subunit A5
chr10_-_13996565 0.01 ENSRNOT00000016221
ENSRNOT00000052138
tuberous sclerosis 2
chr2_+_60180215 0.01 ENSRNOT00000084624
prolactin receptor
chr18_+_63203063 0.01 ENSRNOT00000024144
PRELI domain containing 3A
chr10_-_45812641 0.01 ENSRNOT00000038951
zinc finger protein 867
chr4_-_130659697 0.01 ENSRNOT00000072374
rCG56280-like
chr14_-_87701884 0.01 ENSRNOT00000079338
motile sperm domain containing 1
chr3_-_9936352 0.01 ENSRNOT00000011224
ENSRNOT00000042798
formin binding protein 1
chr13_+_82072497 0.01 ENSRNOT00000063810
ENSRNOT00000085135
kinesin-associated protein 3
chr3_-_82757204 0.01 ENSRNOT00000012214
1-aminocyclopropane-1-carboxylate synthase homolog
chr6_+_95323579 0.01 ENSRNOT00000007369
pecanex homolog 4 (Drosophila)
chr1_+_1771710 0.01 ENSRNOT00000080138
ENSRNOT00000073528
nucleoporin 43
chrX_-_56765893 0.01 ENSRNOT00000076283
interleukin 1 receptor accessory protein-like 1
chr2_-_198834925 0.01 ENSRNOT00000089831
nudix hydrolase 17
chr4_+_160020472 0.01 ENSRNOT00000078802
poly (ADP-ribose) polymerase family, member 11
chr14_+_99529284 0.01 ENSRNOT00000006897
ENSRNOT00000067134
V-set and transmembrane domain containing 2A
chrX_+_31054394 0.01 ENSRNOT00000037439
similar to ribonucleic acid binding protein S1
chr10_+_10875983 0.01 ENSRNOT00000052265
similar to 60S ribosomal protein L37a
chr20_-_27782586 0.01 ENSRNOT00000001093
dermatan sulfate epimerase
chr15_-_47338976 0.01 ENSRNOT00000016562
similar to 4930578I06Rik protein
chr13_+_103300932 0.01 ENSRNOT00000085214
ENSRNOT00000038264
glutamyl-prolyl-tRNA synthetase
chr9_-_63641400 0.01 ENSRNOT00000087684
SATB homeobox 2
chr1_-_89094530 0.01 ENSRNOT00000031873
ets variant 2
chr7_+_40316639 0.01 ENSRNOT00000080150
similar to hypothetical protein FLJ35821
chr11_-_70207361 0.01 ENSRNOT00000002444
mucin 13, cell surface associated
chr17_-_45746753 0.01 ENSRNOT00000077475
similar to brain Zn-finger protein
chr2_+_62150493 0.00 ENSRNOT00000080241
zinc finger RNA binding protein
chr3_+_16846412 0.00 ENSRNOT00000074266

chr18_+_30424814 0.00 ENSRNOT00000073425
protocadherin beta 7
chrM_+_10160 0.00 ENSRNOT00000042928
mitochondrially encoded NADH dehydrogenase 4
chr5_+_138470069 0.00 ENSRNOT00000076343
ENSRNOT00000064073
zinc finger, MYND-type containing 12
chr1_-_147077568 0.00 ENSRNOT00000074040
synaptonemal complex protein 3-like
chr1_+_190229528 0.00 ENSRNOT00000088121
ATP-binding cassette, subfamily A (ABC1), member 16
chr10_+_106065712 0.00 ENSRNOT00000003690
SEC14-like lipid binding 1
chr7_-_114590119 0.00 ENSRNOT00000079599
protein tyrosine kinase 2
chr11_-_79703736 0.00 ENSRNOT00000044279
LIM domain containing preferred translocation partner in lipoma
chr8_-_87419564 0.00 ENSRNOT00000015365
filamin A interacting protein 1
chr4_-_168517177 0.00 ENSRNOT00000009151
dual specificity phosphatase 16

Network of associatons between targets according to the STRING database.

First level regulatory network of Lhx8

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0042489 negative regulation of odontogenesis of dentin-containing tooth(GO:0042489)
0.0 0.1 GO:2000354 regulation of ovarian follicle development(GO:2000354)
0.0 0.1 GO:1904428 negative regulation of tubulin deacetylation(GO:1904428)
0.0 0.1 GO:0050975 sensory perception of touch(GO:0050975)
0.0 0.1 GO:0051562 negative regulation of mitochondrial calcium ion concentration(GO:0051562)
0.0 0.0 GO:0002343 peripheral B cell selection(GO:0002343) B cell affinity maturation(GO:0002344)
0.0 0.0 GO:0034421 post-translational protein acetylation(GO:0034421)
0.0 0.0 GO:0010034 response to acetate(GO:0010034)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:1990005 granular vesicle(GO:1990005)
0.0 0.1 GO:0097441 basilar dendrite(GO:0097441)
0.0 0.1 GO:0061689 tricellular tight junction(GO:0061689)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.0 0.1 GO:0004699 calcium-independent protein kinase C activity(GO:0004699)
0.0 0.0 GO:0005128 erythropoietin receptor binding(GO:0005128)
0.0 0.1 GO:0001594 trace-amine receptor activity(GO:0001594)
0.0 0.0 GO:0008384 IkappaB kinase activity(GO:0008384)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 REACTOME HORMONE LIGAND BINDING RECEPTORS Genes involved in Hormone ligand-binding receptors