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GSE49485: Hypoxia transcriptome sequencing of rat brain.
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Results for Ikzf2
Z-value: 0.42
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Transcription factors associated with Ikzf2
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Ikzf2 | rn6_v1_chr9_-_76768770_76768806 | -0.40 | 5.0e-01 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr9_-_15274917 Show fit | 0.25 |
ENSRNOT00000019650
|
progastricsin |
|
| chr2_-_208225888 Show fit | 0.14 |
ENSRNOT00000054860
|
|
|
| chr9_+_40975836 Show fit | 0.14 |
ENSRNOT00000084470
|
protein tyrosine phosphatase, non-receptor type 18 |
|
| chr15_-_33250546 Show fit | 0.12 |
ENSRNOT00000017857
|
similar to RIKEN cDNA 4931414P19 |
|
| chr1_+_141767940 Show fit | 0.12 |
ENSRNOT00000064034
|
zinc finger protein 710 |
|
| chr12_-_51965779 Show fit | 0.11 |
ENSRNOT00000056733
|
replication protein A3-like |
|
| chr9_+_73433252 Show fit | 0.11 |
ENSRNOT00000092540
|
microtubule-associated protein 2 |
|
| chr1_-_131454689 Show fit | 0.11 |
ENSRNOT00000014152
|
nuclear receptor subfamily 2, group F, member 2 |
|
| chr5_+_58393233 Show fit | 0.10 |
ENSRNOT00000000142
|
DnaJ heat shock protein family (Hsp40) member B5 |
|
| chr4_-_117296082 Show fit | 0.10 |
ENSRNOT00000021097
|
early growth response 4 |
Network of associatons between targets according to the STRING database.
First level regulatory network of Ikzf2
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.2 | GO:0002803 | positive regulation of antimicrobial peptide production(GO:0002225) positive regulation of antibacterial peptide production(GO:0002803) |
| 0.0 | 0.1 | GO:0060838 | lymphatic endothelial cell fate commitment(GO:0060838) regulation of transcription involved in lymphatic endothelial cell fate commitment(GO:0060849) |
| 0.0 | 0.1 | GO:0035709 | memory T cell activation(GO:0035709) regulation of memory T cell activation(GO:2000567) positive regulation of memory T cell activation(GO:2000568) |
| 0.0 | 0.1 | GO:0033861 | negative regulation of NAD(P)H oxidase activity(GO:0033861) |
| 0.0 | 0.1 | GO:0090164 | asymmetric Golgi ribbon formation(GO:0090164) |
| 0.0 | 0.1 | GO:0060414 | aorta smooth muscle tissue morphogenesis(GO:0060414) |
| 0.0 | 0.1 | GO:0071899 | trachea submucosa development(GO:0061152) trachea gland development(GO:0061153) odontoblast differentiation(GO:0071895) regulation of estrogen receptor binding(GO:0071898) negative regulation of estrogen receptor binding(GO:0071899) |
| 0.0 | 0.1 | GO:0036394 | amylase secretion(GO:0036394) |
| 0.0 | 0.0 | GO:0032701 | negative regulation of interleukin-18 production(GO:0032701) |
| 0.0 | 0.0 | GO:0043974 | histone H3-K27 acetylation(GO:0043974) regulation of histone H3-K27 acetylation(GO:1901674) regulation of cellular response to drug(GO:2001038) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.1 | GO:1990907 | beta-catenin-TCF complex(GO:1990907) |
| 0.0 | 0.1 | GO:0097442 | CA3 pyramidal cell dendrite(GO:0097442) |
| 0.0 | 0.1 | GO:0000221 | vacuolar proton-transporting V-type ATPase, V1 domain(GO:0000221) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0004190 | aspartic-type endopeptidase activity(GO:0004190) |
| 0.0 | 0.1 | GO:0023025 | MHC class Ib protein complex binding(GO:0023025) MHC class Ib protein binding, via antigen binding groove(GO:0023030) |
| 0.0 | 0.1 | GO:0004726 | non-membrane spanning protein tyrosine phosphatase activity(GO:0004726) |
| 0.0 | 0.1 | GO:0016909 | JUN kinase activity(GO:0004705) SAP kinase activity(GO:0016909) |
| 0.0 | 0.0 | GO:0035727 | lysophosphatidic acid binding(GO:0035727) lysophosphatidic acid receptor activity(GO:0070915) |