GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Hoxb4 Links NCBI RGD Ensembl	ENSRNOG00000008191	homeo box B4

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Hoxb4	rn6_v1_chr10_+_84167331_84167331	0.71	1.8e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr4_+_148782479 Show fit	0.32	ENSRNOT00000018133	LOC500300 Links NCBI RGD Ensembl Show fit	similar to hypothetical protein MGC6835
chrX_+_136460215 Show fit	0.18	ENSRNOT00000093538	Arhgap36 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 36
chr19_-_37427989 Show fit	0.16	ENSRNOT00000022863	Tppp3 Links NCBI RGD Ensembl Show fit	tubulin polymerization-promoting protein family member 3
chr1_+_40816107 Show fit	0.11	ENSRNOT00000060767	Akap12 Links NCBI RGD Ensembl Show fit	A-kinase anchoring protein 12
chr11_+_17538063 Show fit	0.08	ENSRNOT00000031889 ENSRNOT00000090878	Chodl Links NCBI RGD Ensembl Show fit	chondrolectin
chr7_+_79138925 Show fit	0.06	ENSRNOT00000047511	AABR07057586.1 Links NCBI RGD Ensembl Show fit
chr7_+_37812831 Show fit	0.06	ENSRNOT00000005910	Btg1 Links NCBI RGD Ensembl Show fit	BTG anti-proliferation factor 1
chr10_-_44147035 Show fit	0.05	ENSRNOT00000041113	Olr1424 Links NCBI RGD Ensembl Show fit	olfactory receptor 1424
chr7_-_29171783 Show fit	0.04	ENSRNOT00000079235	Mybpc1 Links NCBI RGD Ensembl Show fit	myosin binding protein C, slow type
chr10_+_34402482 Show fit	0.04	ENSRNOT00000072317	Tpcr12 Links NCBI RGD Ensembl Show fit	putative olfactory receptor
chr1_+_264507985 Show fit	0.04	ENSRNOT00000085811	Pax2 Links NCBI RGD Ensembl Show fit	paired box 2
chrX_-_136807885 Show fit	0.04	ENSRNOT00000010325	Igsf1 Links NCBI RGD Ensembl Show fit	immunoglobulin superfamily, member 1
chr2_+_212247451 Show fit	0.04	ENSRNOT00000027813	Vav3 Links NCBI RGD Ensembl Show fit	vav guanine nucleotide exchange factor 3
chr20_+_26999795 Show fit	0.03	ENSRNOT00000057872	Mypn Links NCBI RGD Ensembl Show fit	myopalladin
chr3_-_104018861 Show fit	0.02	ENSRNOT00000008387	Chrm5 Links NCBI RGD Ensembl Show fit	cholinergic receptor, muscarinic 5
chr1_-_215838209 Show fit	0.02	ENSRNOT00000050760	Igf2 Links NCBI RGD Ensembl Show fit	insulin-like growth factor 2
chr17_+_90696019 Show fit	0.01	ENSRNOT00000003438	Gpr137b Links NCBI RGD Ensembl Show fit	G protein-coupled receptor 137B
chr15_-_6587367 Show fit	0.01	ENSRNOT00000038449	Zfp385d Links NCBI RGD Ensembl Show fit	zinc finger protein 385D
chr1_+_167870452 Show fit	0.01	ENSRNOT00000025027	Olr63 Links NCBI RGD Ensembl Show fit	olfactory receptor 63
chr16_+_9486832 Show fit	0.01	ENSRNOT00000082208	Arhgap22 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 22
chr3_-_72171078 Show fit	0.01	ENSRNOT00000009817	Serping1 Links NCBI RGD Ensembl Show fit	serpin family G member 1
chr10_-_25910298 Show fit	0.00	ENSRNOT00000065633 ENSRNOT00000079646	Ccng1 Links NCBI RGD Ensembl Show fit	cyclin G1

View svg image
View png image

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:0035566	regulation of metanephros size(GO:0035566)
0.0	0.1	GO:0010739	positive regulation of protein kinase A signaling(GO:0010739)