GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Hoxa3 Links NCBI RGD Ensembl	ENSRNOG00000006281	homeobox A3

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Hoxa3	rn6_v1_chr4_-_82141385_82141385	0.85	6.9e-02	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr2_+_145174876 Show fit	0.23	ENSRNOT00000040631	Mab21l1 Links NCBI RGD Ensembl Show fit	mab-21 like 1
chr2_-_185852759 Show fit	0.13	ENSRNOT00000049461	Mab21l2 Links NCBI RGD Ensembl Show fit	mab-21 like 2
chr12_-_45801842 Show fit	0.07	ENSRNOT00000078837	AABR07036513.1 Links NCBI RGD Ensembl Show fit
chr12_-_35979193 Show fit	0.03	ENSRNOT00000071104	Tmem132b Links NCBI RGD Ensembl Show fit	transmembrane protein 132B
chr5_-_168734296 Show fit	0.03	ENSRNOT00000066120	Camta1 Links NCBI RGD Ensembl Show fit	calmodulin binding transcription activator 1
chr4_+_147832136 Show fit	0.03	ENSRNOT00000064603	Rho Links NCBI RGD Ensembl Show fit	rhodopsin
chr3_-_104018861 Show fit	0.02	ENSRNOT00000008387	Chrm5 Links NCBI RGD Ensembl Show fit	cholinergic receptor, muscarinic 5
chr2_-_33025271 Show fit	0.02	ENSRNOT00000074941	NEWGENE_1310139 Links NCBI RGD Ensembl Show fit	microtubule associated serine/threonine kinase family member 4
chr6_+_80108655 Show fit	0.02	ENSRNOT00000006137	Gemin2 Links NCBI RGD Ensembl Show fit	gem (nuclear organelle) associated protein 2
chr1_-_220938814 Show fit	0.02	ENSRNOT00000028081	Ovol1 Links NCBI RGD Ensembl Show fit	ovo like transcriptional repressor 1
chr11_-_71136673 Show fit	0.01	ENSRNOT00000042240	Fyttd1 Links NCBI RGD Ensembl Show fit	forty-two-three domain containing 1
chr10_-_87286387 Show fit	0.01	ENSRNOT00000044206	Krt28 Links NCBI RGD Ensembl Show fit	keratin 28
chr4_-_18396035 Show fit	0.01	ENSRNOT00000034692	Sema3a Links NCBI RGD Ensembl Show fit	semaphorin 3A
chr18_+_16544508 Show fit	0.01	ENSRNOT00000020601	Elp2 Links NCBI RGD Ensembl Show fit	elongator acetyltransferase complex subunit 2
chr7_-_143016040 Show fit	0.01	ENSRNOT00000029697	Krt80 Links NCBI RGD Ensembl Show fit	keratin 80
chr1_-_101095594 Show fit	0.00	ENSRNOT00000027944	Fcgrt Links NCBI RGD Ensembl Show fit	Fc fragment of IgG receptor and transporter
chr3_-_90751055 Show fit	0.00	ENSRNOT00000040741	LOC499843 Links NCBI RGD Ensembl Show fit	LRRGT00091
chr2_+_266315036 Show fit	0.00	ENSRNOT00000055245	Wls Links NCBI RGD Ensembl Show fit	wntless Wnt ligand secretion mediator
chr3_-_160561741 Show fit	0.00	ENSRNOT00000018364	Kcns1 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel, modifier subfamily S, member 1
chr9_+_66058047 Show fit	0.00	ENSRNOT00000071819	Cdk15 Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase 15
chr4_-_170740274 Show fit	0.00	ENSRNOT00000012212	Gucy2c Links NCBI RGD Ensembl Show fit	guanylate cyclase 2C

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