GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Hes1 Links NCBI RGD Ensembl	ENSRNOG00000001720	hes family bHLH transcription factor 1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Hes1	rn6_v1_chr11_-_74315248_74315248	0.69	2.0e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr5_-_156811650 Show fit	0.77	ENSRNOT00000068065	Fam43b Links NCBI RGD Ensembl Show fit	family with sequence similarity 43, member B
chr4_-_117296082 Show fit	0.50	ENSRNOT00000021097	Egr4 Links NCBI RGD Ensembl Show fit	early growth response 4
chr3_+_147585947 Show fit	0.44	ENSRNOT00000006833	Scrt2 Links NCBI RGD Ensembl Show fit	scratch family transcriptional repressor 2
chr5_+_156810991 Show fit	0.23	ENSRNOT00000055904	AABR07050222.1 Links NCBI RGD Ensembl Show fit
chr6_-_42473738 Show fit	0.20	ENSRNOT00000033327	Kcnf1 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel modifier subfamily F member 1
chr15_+_51756978 Show fit	0.19	ENSRNOT00000024067	Egr3 Links NCBI RGD Ensembl Show fit	early growth response 3
chr17_-_23923792 Show fit	0.19	ENSRNOT00000018739	Gfod1 Links NCBI RGD Ensembl Show fit	glucose-fructose oxidoreductase domain containing 1
chr4_+_32373641 Show fit	0.17	ENSRNOT00000076086	Dlx6 Links NCBI RGD Ensembl Show fit	distal-less homeobox 6
chr3_+_154395187 Show fit	0.16	ENSRNOT00000050810	Vstm2l Links NCBI RGD Ensembl Show fit	V-set and transmembrane domain containing 2 like
chr8_-_115981910 Show fit	0.16	ENSRNOT00000019867	Dock3 Links NCBI RGD Ensembl Show fit	dedicator of cyto-kinesis 3
chr7_+_12764993 Show fit	0.16	ENSRNOT00000017064	Grin3b Links NCBI RGD Ensembl Show fit	glutamate ionotropic receptor NMDA type subunit 3B
chr7_-_70452675 Show fit	0.16	ENSRNOT00000090498	AC114111.1 Links NCBI RGD Ensembl Show fit
chr2_+_124400679 Show fit	0.16	ENSRNOT00000058495 ENSRNOT00000067034	Spry1 Links NCBI RGD Ensembl Show fit	sprouty RTK signaling antagonist 1
chr11_-_36479868 Show fit	0.15	ENSRNOT00000075762	LOC100911295 Links NCBI RGD Ensembl Show fit	non-histone chromosomal protein HMG-14-like
chr4_+_148139528 Show fit	0.15	ENSRNOT00000092594 ENSRNOT00000015620 ENSRNOT00000092613	Washc2c Links NCBI RGD Ensembl Show fit	WASH complex subunit 2C
chr6_+_136720582 Show fit	0.15	ENSRNOT00000086868	Kif26a Links NCBI RGD Ensembl Show fit	kinesin family member 26A
chr15_-_61564695 Show fit	0.15	ENSRNOT00000068216	Rgcc Links NCBI RGD Ensembl Show fit	regulator of cell cycle
chr10_-_29450644 Show fit	0.14	ENSRNOT00000087937	Adra1b Links NCBI RGD Ensembl Show fit	adrenoceptor alpha 1B
chr10_+_17209212 Show fit	0.14	ENSRNOT00000073675	Sh3pxd2b Links NCBI RGD Ensembl Show fit	SH3 and PX domains 2B
chr11_-_38420032 Show fit	0.14	ENSRNOT00000002209 ENSRNOT00000080681	C2cd2 Links NCBI RGD Ensembl Show fit	C2 calcium-dependent domain containing 2
chr3_+_13838304 Show fit	0.14	ENSRNOT00000025067	Hspa5 Links NCBI RGD Ensembl Show fit	heat shock protein family A member 5
chr19_+_10519493 Show fit	0.13	ENSRNOT00000030229	Ccdc102a Links NCBI RGD Ensembl Show fit	coiled-coil domain containing 102A
chr18_-_56115593 Show fit	0.13	ENSRNOT00000045041	Tcof1 Links NCBI RGD Ensembl Show fit	treacle ribosome biogenesis factor 1
chr7_+_11215328 Show fit	0.13	ENSRNOT00000061194	LOC690617 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC690617
chr15_-_34198921 Show fit	0.13	ENSRNOT00000024991	Nrl Links NCBI RGD Ensembl Show fit	neural retina leucine zipper
chr3_-_38277440 Show fit	0.12	ENSRNOT00000037857	Stam2 Links NCBI RGD Ensembl Show fit	signal transducing adaptor molecule 2
chr15_+_24078280 Show fit	0.12	ENSRNOT00000015511 ENSRNOT00000063807	Mapk1ip1l Links NCBI RGD Ensembl Show fit	mitogen-activated protein kinase 1 interacting protein 1-like
chr6_+_136720266 Show fit	0.12	ENSRNOT00000018278	Kif26a Links NCBI RGD Ensembl Show fit	kinesin family member 26A
chr8_+_118333706 Show fit	0.12	ENSRNOT00000028278	Cspg5 Links NCBI RGD Ensembl Show fit	chondroitin sulfate proteoglycan 5
chr7_+_130474279 Show fit	0.12	ENSRNOT00000092388	Shank3 Links NCBI RGD Ensembl Show fit	SH3 and multiple ankyrin repeat domains 3
chr5_+_48290061 Show fit	0.12	ENSRNOT00000076508	Ube2j1 Links NCBI RGD Ensembl Show fit	ubiquitin-conjugating enzyme E2, J1
chr12_-_41485122 Show fit	0.11	ENSRNOT00000001859	Ddx54 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 54
chr8_+_70603249 Show fit	0.11	ENSRNOT00000067016 ENSRNOT00000072486	Igdcc4 Links NCBI RGD Ensembl Show fit	immunoglobulin superfamily, DCC subclass, member 4
chr2_+_95320283 Show fit	0.11	ENSRNOT00000015537	Hey1 Links NCBI RGD Ensembl Show fit	hes-related family bHLH transcription factor with YRPW motif 1
chr5_-_152589719 Show fit	0.11	ENSRNOT00000022522	Extl1 Links NCBI RGD Ensembl Show fit	exostosin-like glycosyltransferase 1
chr4_+_99239115 Show fit	0.11	ENSRNOT00000009515	Cd8a Links NCBI RGD Ensembl Show fit	CD8a molecule
chr10_-_108196217 Show fit	0.10	ENSRNOT00000075440	Cbx4 Links NCBI RGD Ensembl Show fit	chromobox 4
chr10_-_109821807 Show fit	0.10	ENSRNOT00000054949	Pycr1 Links NCBI RGD Ensembl Show fit	pyrroline-5-carboxylate reductase 1
chr2_-_211715311 Show fit	0.10	ENSRNOT00000027738	Prpf38b Links NCBI RGD Ensembl Show fit	pre-mRNA processing factor 38B
chr1_+_222519615 Show fit	0.10	ENSRNOT00000083585	Rcor2 Links NCBI RGD Ensembl Show fit	REST corepressor 2
chr15_+_27875911 Show fit	0.10	ENSRNOT00000013582	Pnp Links NCBI RGD Ensembl Show fit	purine nucleoside phosphorylase
chr4_-_132171153 Show fit	0.10	ENSRNOT00000015058 ENSRNOT00000015075	Prok2 Links NCBI RGD Ensembl Show fit	prokineticin 2
chr3_+_138504214 Show fit	0.09	ENSRNOT00000091529	Kat14 Links NCBI RGD Ensembl Show fit	lysine acetyltransferase 14
chr7_-_11330278 Show fit	0.09	ENSRNOT00000027730	Matk Links NCBI RGD Ensembl Show fit	megakaryocyte-associated tyrosine kinase
chr17_-_20364714 Show fit	0.08	ENSRNOT00000070962	Jarid2 Links NCBI RGD Ensembl Show fit	jumonji and AT-rich interaction domain containing 2
chr17_+_76079720 Show fit	0.08	ENSRNOT00000073933	Proser2 Links NCBI RGD Ensembl Show fit	proline and serine rich 2
chr1_-_125967756 Show fit	0.08	ENSRNOT00000031488	Fam189a1 Links NCBI RGD Ensembl Show fit	family with sequence similarity 189, member A1
chr2_-_235257464 Show fit	0.08	ENSRNOT00000093472	Gar1 Links NCBI RGD Ensembl Show fit	GAR1 ribonucleoprotein
chr11_+_39482408 Show fit	0.08	ENSRNOT00000075126	Hmgn1 Links NCBI RGD Ensembl Show fit	high mobility group nucleosome binding domain 1
chr14_-_78377825 Show fit	0.08	ENSRNOT00000068104	AABR07015812.1 Links NCBI RGD Ensembl Show fit
chr17_-_85141210 Show fit	0.08	ENSRNOT00000000162	Dnajc1 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member C1
chr1_+_248228496 Show fit	0.08	ENSRNOT00000015406	Uhrf2 Links NCBI RGD Ensembl Show fit	ubiquitin like with PHD and ring finger domains 2
chr7_-_126461658 Show fit	0.07	ENSRNOT00000081032	Wnt7b Links NCBI RGD Ensembl Show fit	wingless-type MMTV integration site family, member 7B
chr1_-_212633304 Show fit	0.07	ENSRNOT00000025611	Olr286 Links NCBI RGD Ensembl Show fit	olfactory receptor 286
chr1_+_82452469 Show fit	0.07	ENSRNOT00000028026	Exosc5 Links NCBI RGD Ensembl Show fit	exosome component 5
chr10_+_15620871 Show fit	0.07	ENSRNOT00000089435 ENSRNOT00000066430	Nprl3 Links NCBI RGD Ensembl Show fit	NPR3-like, GATOR1 complex subunit
chr13_+_52662996 Show fit	0.07	ENSRNOT00000047682	Tnnt2 Links NCBI RGD Ensembl Show fit	troponin T2, cardiac type
chr10_+_48773828 Show fit	0.07	ENSRNOT00000004113	Pigl Links NCBI RGD Ensembl Show fit	phosphatidylinositol glycan anchor biosynthesis, class L
chr20_-_31072469 Show fit	0.07	ENSRNOT00000082448	Eif4ebp2 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 4E binding protein 2
chr9_+_10013854 Show fit	0.07	ENSRNOT00000077653 ENSRNOT00000072033	Khsrp Links NCBI RGD Ensembl Show fit	KH-type splicing regulatory protein
chr13_-_102942863 Show fit	0.07	ENSRNOT00000003198	Mark1 Links NCBI RGD Ensembl Show fit	microtubule affinity regulating kinase 1
chr1_-_86948845 Show fit	0.06	ENSRNOT00000027212	Nfkbib Links NCBI RGD Ensembl Show fit	NFKB inhibitor beta
chr5_+_152681101 Show fit	0.06	ENSRNOT00000076052 ENSRNOT00000022574	Stmn1 Links NCBI RGD Ensembl Show fit	stathmin 1
chr8_+_82288705 Show fit	0.06	ENSRNOT00000012409	Bcl2l10 Links NCBI RGD Ensembl Show fit	BCL2 like 10
chr1_+_162320730 Show fit	0.06	ENSRNOT00000035743	Kctd21 Links NCBI RGD Ensembl Show fit	potassium channel tetramerization domain containing 21
chr15_+_19338175 Show fit	0.06	ENSRNOT00000075209	Ptger2 Links NCBI RGD Ensembl Show fit	prostaglandin E receptor 2
chr20_+_10930518 Show fit	0.06	ENSRNOT00000001589	Pdxk Links NCBI RGD Ensembl Show fit	pyridoxal (pyridoxine, vitamin B6) kinase
chr15_+_19603288 Show fit	0.06	ENSRNOT00000035491	LOC102552640 Links NCBI RGD Ensembl Show fit	REST corepressor 2-like
chr10_-_72142533 Show fit	0.06	ENSRNOT00000030885	Mrm1 Links NCBI RGD Ensembl Show fit	mitochondrial rRNA methyltransferase 1
chr12_+_47218969 Show fit	0.06	ENSRNOT00000081343 ENSRNOT00000038395	Unc119b Links NCBI RGD Ensembl Show fit	unc-119 lipid binding chaperone B
chr3_+_150910398 Show fit	0.06	ENSRNOT00000055310	Tp53inp2 Links NCBI RGD Ensembl Show fit	tumor protein p53 inducible nuclear protein 2
chr8_+_62723788 Show fit	0.06	ENSRNOT00000010620	Sema7a Links NCBI RGD Ensembl Show fit	semaphorin 7A (John Milton Hagen blood group)
chr2_-_210550490 Show fit	0.06	ENSRNOT00000081835 ENSRNOT00000025222 ENSRNOT00000086403	Csf1 Links NCBI RGD Ensembl Show fit	colony stimulating factor 1
chr10_+_47018974 Show fit	0.06	ENSRNOT00000079375	Smcr8 Links NCBI RGD Ensembl Show fit	Smith-Magenis syndrome chromosome region, candidate 8
chr10_+_103438303 Show fit	0.06	ENSRNOT00000085262	Cd300a Links NCBI RGD Ensembl Show fit	Cd300a molecule
chr11_+_34051993 Show fit	0.05	ENSRNOT00000076473 ENSRNOT00000064751	Morc3 Links NCBI RGD Ensembl Show fit	MORC family CW-type zinc finger 3
chr1_+_82480195 Show fit	0.05	ENSRNOT00000028051	Tgfb1 Links NCBI RGD Ensembl Show fit	transforming growth factor, beta 1
chr3_-_94419048 Show fit	0.05	ENSRNOT00000015775	Hipk3 Links NCBI RGD Ensembl Show fit	homeodomain interacting protein kinase 3
chr5_-_151117042 Show fit	0.05	ENSRNOT00000066549	Fam76a Links NCBI RGD Ensembl Show fit	family with sequence similarity 76, member A
chr5_+_135735825 Show fit	0.05	ENSRNOT00000068267	Zswim5 Links NCBI RGD Ensembl Show fit	zinc finger, SWIM-type containing 5
chr16_+_9486832 Show fit	0.05	ENSRNOT00000082208	Arhgap22 Links NCBI RGD Ensembl Show fit	Rho GTPase activating protein 22
chr10_+_102136283 Show fit	0.05	ENSRNOT00000003735	Sstr2 Links NCBI RGD Ensembl Show fit	somatostatin receptor 2
chr9_+_94310469 Show fit	0.05	ENSRNOT00000065743	Eif4e2 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 4E family member 2
chr10_-_15161938 Show fit	0.05	ENSRNOT00000026641	Fam173a Links NCBI RGD Ensembl Show fit	family with sequence similarity 173, member A
chr4_+_116968000 Show fit	0.05	ENSRNOT00000020786	Emx1 Links NCBI RGD Ensembl Show fit	empty spiracles homeobox 1
chr6_-_26855658 Show fit	0.05	ENSRNOT00000011635	Agbl5 Links NCBI RGD Ensembl Show fit	ATP/GTP binding protein-like 5
chr9_+_10428853 Show fit	0.05	ENSRNOT00000074253	Lonp1 Links NCBI RGD Ensembl Show fit	lon peptidase 1, mitochondrial
chr12_-_13998172 Show fit	0.05	ENSRNOT00000001476	Wipi2 Links NCBI RGD Ensembl Show fit	WD repeat domain, phosphoinositide interacting 2
chr3_-_4405194 Show fit	0.05	ENSRNOT00000072025	AABR07051266.1 Links NCBI RGD Ensembl Show fit
chr14_-_85350786 Show fit	0.05	ENSRNOT00000012634	LOC100912481 Links NCBI RGD Ensembl Show fit	RNA-binding protein EWS-like
chr1_+_198911911 Show fit	0.04	ENSRNOT00000055002	Prr14 Links NCBI RGD Ensembl Show fit	proline rich 14
chr8_+_59278262 Show fit	0.04	ENSRNOT00000017053	Dnaja4 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member A4
chr5_+_154205402 Show fit	0.04	ENSRNOT00000064925	Srsf10 Links NCBI RGD Ensembl Show fit	serine and arginine rich splicing factor 10
chr1_-_18058055 Show fit	0.04	ENSRNOT00000020988	Ptprk Links NCBI RGD Ensembl Show fit	protein tyrosine phosphatase, receptor type, K
chr5_-_154363329 Show fit	0.04	ENSRNOT00000064596	Eloa Links NCBI RGD Ensembl Show fit	elongin A
chrX_+_128416722 Show fit	0.04	ENSRNOT00000009336 ENSRNOT00000085110	Xiap Links NCBI RGD Ensembl Show fit	X-linked inhibitor of apoptosis
chr3_-_175479395 Show fit	0.04	ENSRNOT00000077308	Hrh3 Links NCBI RGD Ensembl Show fit	histamine receptor H3
chr10_+_14547172 Show fit	0.04	ENSRNOT00000092043	Unkl Links NCBI RGD Ensembl Show fit	unkempt family like zinc finger
chr7_-_2986935 Show fit	0.04	ENSRNOT00000081125 ENSRNOT00000006578	Pa2g4 Links NCBI RGD Ensembl Show fit	proliferation-associated 2G4
chr2_-_189400323 Show fit	0.04	ENSRNOT00000024364	Ubap2l Links NCBI RGD Ensembl Show fit	ubiquitin associated protein 2-like
chr17_-_89923990 Show fit	0.04	ENSRNOT00000071150	LOC100910957 Links NCBI RGD Ensembl Show fit	acyl-CoA-binding domain-containing protein 5-like
chr1_+_128199322 Show fit	0.04	ENSRNOT00000075131	Lysmd4 Links NCBI RGD Ensembl Show fit	LysM domain containing 4
chr5_+_150080072 Show fit	0.04	ENSRNOT00000047917	Tmem200b Links NCBI RGD Ensembl Show fit	transmembrane protein 200B
chr6_-_28464118 Show fit	0.04	ENSRNOT00000068214	Efr3b Links NCBI RGD Ensembl Show fit	EFR3 homolog B
chr17_-_89923423 Show fit	0.04	ENSRNOT00000076964	Acbd5 Links NCBI RGD Ensembl Show fit	acyl-CoA binding domain containing 5
chr12_-_39396042 Show fit	0.04	ENSRNOT00000001746	P2rx7 Links NCBI RGD Ensembl Show fit	purinergic receptor P2X 7
chr2_-_22385855 Show fit	0.04	ENSRNOT00000083531	Thbs4 Links NCBI RGD Ensembl Show fit	thrombospondin 4
chr6_+_93539271 Show fit	0.04	ENSRNOT00000078791	Tomm20l Links NCBI RGD Ensembl Show fit	translocase of outer mitochondrial membrane 20 homolog (yeast)-like
chr16_-_71237118 Show fit	0.04	ENSRNOT00000066974	Nsd3 Links NCBI RGD Ensembl Show fit	nuclear receptor binding SET domain protein 3
chr10_+_63803309 Show fit	0.03	ENSRNOT00000036666	Myo1c Links NCBI RGD Ensembl Show fit	myosin 1C
chrX_+_156716604 Show fit	0.03	ENSRNOT00000092207	Irak1 Links NCBI RGD Ensembl Show fit	interleukin-1 receptor-associated kinase 1
chr3_+_111013856 Show fit	0.03	ENSRNOT00000016854	Zfyve19 Links NCBI RGD Ensembl Show fit	zinc finger FYVE-type containing 19
chr5_-_163167299 Show fit	0.03	ENSRNOT00000022478	Tnfrsf1b Links NCBI RGD Ensembl Show fit	TNF receptor superfamily member 1B
chr20_-_5533600 Show fit	0.03	ENSRNOT00000072319	Cuta Links NCBI RGD Ensembl Show fit	cutA divalent cation tolerance homolog
chr2_-_235257731 Show fit	0.03	ENSRNOT00000078074	Gar1 Links NCBI RGD Ensembl Show fit	GAR1 ribonucleoprotein
chr14_-_85088523 Show fit	0.03	ENSRNOT00000010690	Nf2 Links NCBI RGD Ensembl Show fit	neurofibromin 2
chr20_-_5533448 Show fit	0.03	ENSRNOT00000000568	Cuta Links NCBI RGD Ensembl Show fit	cutA divalent cation tolerance homolog
chr1_-_167308827 Show fit	0.03	ENSRNOT00000027590 ENSRNOT00000027575	Nup98 Links NCBI RGD Ensembl Show fit	nucleoporin 98
chr1_+_214534284 Show fit	0.03	ENSRNOT00000064254	Ap2a2 Links NCBI RGD Ensembl Show fit	adaptor-related protein complex 2, alpha 2 subunit
chr3_+_160945359 Show fit	0.03	ENSRNOT00000019761	Pigt Links NCBI RGD Ensembl Show fit	phosphatidylinositol glycan anchor biosynthesis, class T
chr9_+_50247692 Show fit	0.03	ENSRNOT00000023029	Nck2 Links NCBI RGD Ensembl Show fit	NCK adaptor protein 2
chr5_-_144221263 Show fit	0.03	ENSRNOT00000013570	Thrap3 Links NCBI RGD Ensembl Show fit	thyroid hormone receptor associated protein 3
chr13_-_88061108 Show fit	0.03	ENSRNOT00000003774	Rgs4 Links NCBI RGD Ensembl Show fit	regulator of G-protein signaling 4
chr20_+_11168298 Show fit	0.03	ENSRNOT00000032240	Trappc10 Links NCBI RGD Ensembl Show fit	trafficking protein particle complex 10
chr2_-_250232295 Show fit	0.03	ENSRNOT00000082132	Lmo4 Links NCBI RGD Ensembl Show fit	LIM domain only 4
chr7_+_125833557 Show fit	0.03	ENSRNOT00000018155	Nup50 Links NCBI RGD Ensembl Show fit	nucleoporin 50
chr1_-_72727112 Show fit	0.03	ENSRNOT00000031172	Brsk1 Links NCBI RGD Ensembl Show fit	BR serine/threonine kinase 1
chr17_-_84830185 Show fit	0.03	ENSRNOT00000040697	Skida1 Links NCBI RGD Ensembl Show fit	SKI/DACH domain containing 1
chr16_+_48120864 Show fit	0.03	ENSRNOT00000068562	Stox2 Links NCBI RGD Ensembl Show fit	storkhead box 2
chr16_+_59564419 Show fit	0.03	ENSRNOT00000083434	Lonrf1 Links NCBI RGD Ensembl Show fit	LON peptidase N-terminal domain and ring finger 1
chr9_-_114709546 Show fit	0.03	ENSRNOT00000026177	Rab12 Links NCBI RGD Ensembl Show fit	RAB12, member RAS oncogene family
chr10_+_88459490 Show fit	0.03	ENSRNOT00000080231 ENSRNOT00000067559	Ttc25 Links NCBI RGD Ensembl Show fit	tetratricopeptide repeat domain 25
chr16_+_71787966 Show fit	0.03	ENSRNOT00000080084	Htra4 Links NCBI RGD Ensembl Show fit	HtrA serine peptidase 4
chr5_-_154319629 Show fit	0.03	ENSRNOT00000014415	Lypla2 Links NCBI RGD Ensembl Show fit	lysophospholipase II
chr4_+_168689163 Show fit	0.03	ENSRNOT00000049848	Cdkn1b Links NCBI RGD Ensembl Show fit	cyclin-dependent kinase inhibitor 1B
chr8_+_65733400 Show fit	0.03	ENSRNOT00000089126	Uaca Links NCBI RGD Ensembl Show fit	uveal autoantigen with coiled-coil domains and ankyrin repeats
chr3_-_176791960 Show fit	0.03	ENSRNOT00000018237	Gmeb2 Links NCBI RGD Ensembl Show fit	glucocorticoid modulatory element binding protein 2
chr2_-_22385676 Show fit	0.03	ENSRNOT00000065224	Thbs4 Links NCBI RGD Ensembl Show fit	thrombospondin 4
chr7_+_70452579 Show fit	0.03	ENSRNOT00000046099	B4galnt1 Links NCBI RGD Ensembl Show fit	beta-1,4-N-acetyl-galactosaminyl transferase 1
chr3_-_22952063 Show fit	0.03	ENSRNOT00000083850	Psmb7 Links NCBI RGD Ensembl Show fit	proteasome subunit beta 7
chr8_-_122402127 Show fit	0.02	ENSRNOT00000074238 ENSRNOT00000076548	Crtapl1 Links NCBI RGD Ensembl Show fit	cartilage associated protein-like 1
chr8_-_111850393 Show fit	0.02	ENSRNOT00000044956	Cdv3 Links NCBI RGD Ensembl Show fit	CDV3 homolog
chr10_-_105600913 Show fit	0.02	ENSRNOT00000068026	Rhbdf2 Links NCBI RGD Ensembl Show fit	rhomboid 5 homolog 2
chr10_+_57462447 Show fit	0.02	ENSRNOT00000041443	Rabep1 Links NCBI RGD Ensembl Show fit	rabaptin, RAB GTPase binding effector protein 1
chr2_+_113984646 Show fit	0.02	ENSRNOT00000016799	Tnik Links NCBI RGD Ensembl Show fit	TRAF2 and NCK interacting kinase
chr10_-_4910305 Show fit	0.02	ENSRNOT00000033122	Rmi2 Links NCBI RGD Ensembl Show fit	RecQ mediated genome instability 2
chr11_-_60613718 Show fit	0.02	ENSRNOT00000002906	Atg3 Links NCBI RGD Ensembl Show fit	autophagy related 3
chr9_-_42839837 Show fit	0.02	ENSRNOT00000038610	Neurl3 Links NCBI RGD Ensembl Show fit	neuralized E3 ubiquitin protein ligase 3
chr7_+_126939925 Show fit	0.02	ENSRNOT00000022746	Gramd4 Links NCBI RGD Ensembl Show fit	GRAM domain containing 4
chr10_+_108750620 Show fit	0.02	ENSRNOT00000005337	Rptor Links NCBI RGD Ensembl Show fit	regulatory associated protein of MTOR, complex 1
chr1_-_143535583 Show fit	0.02	ENSRNOT00000087785	Homer2 Links NCBI RGD Ensembl Show fit	homer scaffolding protein 2
chr4_-_66002444 Show fit	0.02	ENSRNOT00000018645	Zc3hav1l Links NCBI RGD Ensembl Show fit	zinc finger CCCH-type containing, antiviral 1 like
chr6_-_26771164 Show fit	0.02	ENSRNOT00000009090	Tcf23 Links NCBI RGD Ensembl Show fit	transcription factor 23
chr14_+_44413636 Show fit	0.02	ENSRNOT00000003552	Smim14 Links NCBI RGD Ensembl Show fit	small integral membrane protein 14
chr14_+_113968563 Show fit	0.02	ENSRNOT00000006085	Clhc1 Links NCBI RGD Ensembl Show fit	clathrin heavy chain linker domain containing 1
chrX_+_63343546 Show fit	0.02	ENSRNOT00000076315	Klhl15 Links NCBI RGD Ensembl Show fit	kelch-like family member 15
chr7_+_77899322 Show fit	0.02	ENSRNOT00000006195	Fzd6 Links NCBI RGD Ensembl Show fit	frizzled class receptor 6
chr10_-_76263866 Show fit	0.02	ENSRNOT00000003219	Scpep1 Links NCBI RGD Ensembl Show fit	serine carboxypeptidase 1
chr4_+_84854386 Show fit	0.02	ENSRNOT00000013620	Mturn Links NCBI RGD Ensembl Show fit	maturin, neural progenitor differentiation regulator homolog
chr19_-_39646693 Show fit	0.02	ENSRNOT00000019104	Psmd7 Links NCBI RGD Ensembl Show fit	proteasome 26S subunit, non-ATPase 7
chr7_+_12542713 Show fit	0.02	ENSRNOT00000080089	Med16 Links NCBI RGD Ensembl Show fit	mediator complex subunit 16
chr10_-_109757550 Show fit	0.02	ENSRNOT00000054957	Arhgdia Links NCBI RGD Ensembl Show fit	Rho GDP dissociation inhibitor alpha
chr16_+_20668971 Show fit	0.02	ENSRNOT00000027073	Uba52 Links NCBI RGD Ensembl Show fit	ubiquitin A-52 residue ribosomal protein fusion product 1
chr7_+_66595742 Show fit	0.02	ENSRNOT00000031191	Usp15 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 15
chr19_+_17290178 Show fit	0.01	ENSRNOT00000060865	Aktip Links NCBI RGD Ensembl Show fit	AKT interacting protein
chr7_-_119689938 Show fit	0.01	ENSRNOT00000000200	Tmprss6 Links NCBI RGD Ensembl Show fit	transmembrane protease, serine 6
chr5_-_39215102 Show fit	0.01	ENSRNOT00000050653	Klhl32 Links NCBI RGD Ensembl Show fit	kelch-like family member 32
chr20_+_2501252 Show fit	0.01	ENSRNOT00000079307 ENSRNOT00000084559	Trim39 Links NCBI RGD Ensembl Show fit	tripartite motif-containing 39
chr1_-_90000386 Show fit	0.01	ENSRNOT00000037519	Wtip Links NCBI RGD Ensembl Show fit	Wilms tumor 1 interacting protein
chr13_+_89797800 Show fit	0.01	ENSRNOT00000005811	Usf1 Links NCBI RGD Ensembl Show fit	upstream transcription factor 1
chr1_-_257498844 Show fit	0.01	ENSRNOT00000019056	Noc3l Links NCBI RGD Ensembl Show fit	NOC3-like DNA replication regulator
chr8_-_23482939 Show fit	0.01	ENSRNOT00000065367	Rp9 Links NCBI RGD Ensembl Show fit	retinitis pigmentosa 9
chr15_-_52029816 Show fit	0.01	ENSRNOT00000013067	Slc39a14 Links NCBI RGD Ensembl Show fit	solute carrier family 39 member 14
chr9_-_88357182 Show fit	0.01	ENSRNOT00000041176	Col4a4 Links NCBI RGD Ensembl Show fit	collagen type IV alpha 4 chain
chr14_+_86101277 Show fit	0.01	ENSRNOT00000018846	Aebp1 Links NCBI RGD Ensembl Show fit	AE binding protein 1
chr2_+_187893368 Show fit	0.01	ENSRNOT00000092031	Mex3a Links NCBI RGD Ensembl Show fit	mex-3 RNA binding family member A
chr1_-_188373571 Show fit	0.01	ENSRNOT00000075020	Knop1 Links NCBI RGD Ensembl Show fit	lysine-rich nucleolar protein 1
chr11_-_24641820 Show fit	0.01	ENSRNOT00000044081 ENSRNOT00000048854	App Links NCBI RGD Ensembl Show fit	amyloid beta precursor protein
chr12_+_49626871 Show fit	0.01	ENSRNOT00000082593	Grk3 Links NCBI RGD Ensembl Show fit	G protein-coupled receptor kinase 3
chr8_+_57964988 Show fit	0.01	ENSRNOT00000009497	Kdelc2 Links NCBI RGD Ensembl Show fit	KDEL motif containing 2
chr17_+_70684340 Show fit	0.01	ENSRNOT00000051067	Pfkfb3 Links NCBI RGD Ensembl Show fit	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
chr19_+_11473541 Show fit	0.01	ENSRNOT00000082066	Amfr Links NCBI RGD Ensembl Show fit	autocrine motility factor receptor
chr14_-_86297623 Show fit	0.01	ENSRNOT00000067162 ENSRNOT00000081607 ENSRNOT00000085265	Camk2b Links NCBI RGD Ensembl Show fit	calcium/calmodulin-dependent protein kinase II beta
chr7_+_78188912 Show fit	0.01	ENSRNOT00000043079	Rims2 Links NCBI RGD Ensembl Show fit	regulating synaptic membrane exocytosis 2
chr8_-_112807598 Show fit	0.01	ENSRNOT00000015344	Dnajc13 Links NCBI RGD Ensembl Show fit	DnaJ heat shock protein family (Hsp40) member C13
chr12_+_25036605 Show fit	0.01	ENSRNOT00000001996 ENSRNOT00000084427	Limk1 Links NCBI RGD Ensembl Show fit	LIM domain kinase 1
chr2_+_251634431 Show fit	0.01	ENSRNOT00000045016	Ddah1 Links NCBI RGD Ensembl Show fit	dimethylarginine dimethylaminohydrolase 1
chr19_-_11144641 Show fit	0.01	ENSRNOT00000081246	Slc12a3 Links NCBI RGD Ensembl Show fit	solute carrier family 12 member 3
chr10_+_104437648 Show fit	0.01	ENSRNOT00000035001	AC130970.1 Links NCBI RGD Ensembl Show fit
chr4_+_119997268 Show fit	0.01	ENSRNOT00000073429	Rpn1 Links NCBI RGD Ensembl Show fit	ribophorin I
chr20_-_13706205 Show fit	0.01	ENSRNOT00000038623	Derl3 Links NCBI RGD Ensembl Show fit	derlin 3
chr7_-_28040510 Show fit	0.01	ENSRNOT00000005674	Ascl1 Links NCBI RGD Ensembl Show fit	achaete-scute family bHLH transcription factor 1
chr3_-_112371664 Show fit	0.01	ENSRNOT00000079606 ENSRNOT00000012636	LOC100910478 Links NCBI RGD Ensembl Show fit	leucine-rich repeat-containing protein 57-like
chr16_+_20121352 Show fit	0.01	ENSRNOT00000025347	Insl3 Links NCBI RGD Ensembl Show fit	insulin-like 3
chr5_+_63050758 Show fit	0.01	ENSRNOT00000009452	Tgfbr1 Links NCBI RGD Ensembl Show fit	transforming growth factor, beta receptor 1
chr2_-_183487820 Show fit	0.00	ENSRNOT00000066477	Fhdc1 Links NCBI RGD Ensembl Show fit	FH2 domain containing 1
chr2_-_179704629 Show fit	0.00	ENSRNOT00000083361 ENSRNOT00000077941	Gria2 Links NCBI RGD Ensembl Show fit	glutamate ionotropic receptor AMPA type subunit 2
chr2_+_9578345 Show fit	0.00	ENSRNOT00000021756	Mblac2 Links NCBI RGD Ensembl Show fit	metallo-beta-lactamase domain containing 2
chr2_+_207108552 Show fit	0.00	ENSRNOT00000027234	Slc16a1 Links NCBI RGD Ensembl Show fit	solute carrier family 16 member 1
chr13_+_44475970 Show fit	0.00	ENSRNOT00000024602 ENSRNOT00000091645	Ccnt2 Links NCBI RGD Ensembl Show fit	cyclin T2

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0001560	regulation of cell growth by extracellular stimulus(GO:0001560)
0.1	0.2	GO:0060938	cardiac fibroblast cell differentiation(GO:0060935) cardiac fibroblast cell development(GO:0060936) epicardium-derived cardiac fibroblast cell differentiation(GO:0060938) epicardium-derived cardiac fibroblast cell development(GO:0060939)
0.0	0.1	GO:0003330	regulation of extracellular matrix constituent secretion(GO:0003330) positive regulation of extracellular matrix constituent secretion(GO:0003331)
0.0	0.1	GO:0001982	baroreceptor response to decreased systemic arterial blood pressure(GO:0001982) positive regulation of glycogen catabolic process(GO:0045819)
0.0	0.1	GO:0021589	hindbrain structural organization(GO:0021577) cerebellum structural organization(GO:0021589)
0.0	0.1	GO:0007468	regulation of rhodopsin gene expression(GO:0007468)
0.0	0.2	GO:2000813	negative regulation of barbed-end actin filament capping(GO:2000813)
0.0	0.1	GO:2000820	negative regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation(GO:2000820)
0.0	0.1	GO:0045065	cytotoxic T cell differentiation(GO:0045065)
0.0	0.1	GO:0055129	L-proline biosynthetic process(GO:0055129)
0.0	0.1	GO:0006738	nicotinamide riboside catabolic process(GO:0006738) urate biosynthetic process(GO:0034418) nicotinamide riboside metabolic process(GO:0046495) pyridine nucleoside metabolic process(GO:0070637) pyridine nucleoside catabolic process(GO:0070638)
0.0	0.1	GO:1904179	positive regulation of adipose tissue development(GO:1904179)
0.0	0.1	GO:0000720	pyrimidine dimer repair by nucleotide-excision repair(GO:0000720)
0.0	0.1	GO:0072054	renal outer medulla development(GO:0072054)
0.0	0.1	GO:1904717	regulation of AMPA glutamate receptor clustering(GO:1904717)
0.0	0.1	GO:0000454	snoRNA guided rRNA pseudouridine synthesis(GO:0000454)
0.0	0.1	GO:0032972	regulation of muscle filament sliding speed(GO:0032972)
0.0	0.1	GO:0042822	pyridoxal phosphate metabolic process(GO:0042822)
0.0	0.1	GO:1903972	regulation of macrophage colony-stimulating factor signaling pathway(GO:1902226) regulation of response to macrophage colony-stimulating factor(GO:1903969) regulation of cellular response to macrophage colony-stimulating factor stimulus(GO:1903972) microglial cell migration(GO:1904124) regulation of microglial cell migration(GO:1904139)
0.0	0.1	GO:0060101	negative regulation of phagocytosis, engulfment(GO:0060101) negative regulation of eosinophil migration(GO:2000417)
0.0	0.1	GO:1900126	negative regulation of hyaluronan biosynthetic process(GO:1900126)
0.0	0.1	GO:0070495	regulation of thrombin receptor signaling pathway(GO:0070494) negative regulation of thrombin receptor signaling pathway(GO:0070495)
0.0	0.1	GO:0071603	endothelial cell-cell adhesion(GO:0071603)
0.0	0.0	GO:0043132	phospholipid transfer to membrane(GO:0006649) NAD transport(GO:0043132) regulation of bleb assembly(GO:1904170)
0.0	0.2	GO:0045586	regulation of gamma-delta T cell differentiation(GO:0045586) regulation of gamma-delta T cell activation(GO:0046643)
0.0	0.1	GO:0014029	neural crest formation(GO:0014029)
0.0	0.1	GO:0071051	U4 snRNA 3'-end processing(GO:0034475) DNA deamination(GO:0045006) polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.0	0.0	GO:1900748	positive regulation of vascular endothelial growth factor signaling pathway(GO:1900748)
0.0	0.0	GO:0090370	negative regulation of cholesterol efflux(GO:0090370)
0.0	0.1	GO:0070862	negative regulation of protein exit from endoplasmic reticulum(GO:0070862) negative regulation of retrograde protein transport, ER to cytosol(GO:1904153)
0.0	0.0	GO:0000973	posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.0	0.1	GO:0038170	somatostatin receptor signaling pathway(GO:0038169) somatostatin signaling pathway(GO:0038170)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0071203	WASH complex(GO:0071203)
0.0	0.1	GO:0090661	box H/ACA telomerase RNP complex(GO:0090661)
0.0	0.1	GO:1990682	CSF1-CSF1R complex(GO:1990682)
0.0	0.1	GO:1990584	cardiac Troponin complex(GO:1990584)
0.0	0.1	GO:1990130	Iml1 complex(GO:1990130)
0.0	0.1	GO:0034663	endoplasmic reticulum chaperone complex(GO:0034663)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0004937	alpha1-adrenergic receptor activity(GO:0004937)
0.0	0.1	GO:0035939	microsatellite binding(GO:0035939)
0.0	0.1	GO:0004735	pyrroline-5-carboxylate reductase activity(GO:0004735)
0.0	0.1	GO:0004731	purine nucleobase binding(GO:0002060) purine-nucleoside phosphorylase activity(GO:0004731)
0.0	0.1	GO:0001042	RNA polymerase I core binding(GO:0001042)
0.0	0.3	GO:0010314	phosphatidylinositol-5-phosphate binding(GO:0010314)
0.0	0.1	GO:1902379	chemoattractant activity involved in axon guidance(GO:1902379)
0.0	0.1	GO:0030160	GKAP/Homer scaffold activity(GO:0030160)
0.0	0.1	GO:0005157	macrophage colony-stimulating factor receptor binding(GO:0005157)
0.0	0.1	GO:0030172	troponin C binding(GO:0030172)
0.0	0.1	GO:0034513	box H/ACA snoRNA binding(GO:0034513)
0.0	0.1	GO:0089720	caspase binding(GO:0089720)
0.0	0.0	GO:0004176	ATP-dependent peptidase activity(GO:0004176)
0.0	0.1	GO:0034714	type III transforming growth factor beta receptor binding(GO:0034714)
0.0	0.0	GO:0004969	histamine receptor activity(GO:0004969)
0.0	0.1	GO:0004994	somatostatin receptor activity(GO:0004994)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.7	ST DIFFERENTIATION PATHWAY IN PC12 CELLS	Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	REACTOME ACTIVATION OF CHAPERONE GENES BY ATF6 ALPHA	Genes involved in Activation of Chaperone Genes by ATF6-alpha