GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Gmeb2 Links NCBI RGD Ensembl	ENSRNOG00000013339	glucocorticoid modulatory element binding protein 2

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Gmeb2	rn6_v1_chr3_-_176781040_176781040	0.70	1.9e-01	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr6_+_26390689 Show fit	0.04	ENSRNOT00000079762 ENSRNOT00000091528	Ift172 Links NCBI RGD Ensembl Show fit	intraflagellar transport 172
chr7_-_141307233 Show fit	0.03	ENSRNOT00000071885	Racgap1 Links NCBI RGD Ensembl Show fit	Rac GTPase-activating protein 1
chr14_+_42714315 Show fit	0.03	ENSRNOT00000084095 ENSRNOT00000091449	Phox2b Links NCBI RGD Ensembl Show fit	paired-like homeobox 2b
chr6_+_8346704 Show fit	0.02	ENSRNOT00000092218	AC111831.2 Links NCBI RGD Ensembl Show fit
chr1_-_190370499 Show fit	0.02	ENSRNOT00000084389	AABR07005618.1 Links NCBI RGD Ensembl Show fit
chr11_+_47243342 Show fit	0.02	ENSRNOT00000041116	Nfkbiz Links NCBI RGD Ensembl Show fit	NFKB inhibitor zeta
chr5_+_57291156 Show fit	0.02	ENSRNOT00000060692 ENSRNOT00000060691	Nfx1 Links NCBI RGD Ensembl Show fit	nuclear transcription factor, X-box binding 1
chr7_-_119768082 Show fit	0.02	ENSRNOT00000009612	Sstr3 Links NCBI RGD Ensembl Show fit	somatostatin receptor 3
chr10_+_90230441 Show fit	0.02	ENSRNOT00000082722	Tmub2 Links NCBI RGD Ensembl Show fit	transmembrane and ubiquitin-like domain containing 2
chr19_+_55300395 Show fit	0.02	ENSRNOT00000092169	Ctu2 Links NCBI RGD Ensembl Show fit	cytosolic thiouridylase subunit 2
chr19_+_16415636 Show fit	0.02	ENSRNOT00000089975	Irx5 Links NCBI RGD Ensembl Show fit	iroquois homeobox 5
chr3_+_33641616 Show fit	0.02	ENSRNOT00000051953	Epc2 Links NCBI RGD Ensembl Show fit	enhancer of polycomb homolog 2
chr5_+_148320438 Show fit	0.01	ENSRNOT00000018742	Pef1 Links NCBI RGD Ensembl Show fit	penta-EF hand domain containing 1
chr4_+_199916 Show fit	0.01	ENSRNOT00000009317	Htr5a Links NCBI RGD Ensembl Show fit	5-hydroxytryptamine receptor 5A
chr4_-_176789304 Show fit	0.01	ENSRNOT00000018057	Kcnj8 Links NCBI RGD Ensembl Show fit	potassium voltage-gated channel subfamily J member 8
chr19_+_37668693 Show fit	0.01	ENSRNOT00000084970	Pard6a Links NCBI RGD Ensembl Show fit	par-6 family cell polarity regulator alpha
chr13_-_73704480 Show fit	0.01	ENSRNOT00000005296	Tor1aip1 Links NCBI RGD Ensembl Show fit	torsin 1A interacting protein 1
chr14_+_79261092 Show fit	0.01	ENSRNOT00000029191	LOC680039 Links NCBI RGD Ensembl Show fit	hypothetical protein LOC680039
chr3_+_164986421 Show fit	0.01	ENSRNOT00000039403	Mocs3 Links NCBI RGD Ensembl Show fit	molybdenum cofactor synthesis 3
chr10_-_71837851 Show fit	0.01	ENSRNOT00000000258	Aatf Links NCBI RGD Ensembl Show fit	apoptosis antagonizing transcription factor
chr5_+_22392732 Show fit	0.01	ENSRNOT00000087182	Clvs1 Links NCBI RGD Ensembl Show fit	clavesin 1
chr9_+_88110731 Show fit	0.01	ENSRNOT00000088677	Rhbdd1 Links NCBI RGD Ensembl Show fit	rhomboid domain containing 1
chr11_-_71419223 Show fit	0.01	ENSRNOT00000002407	Tfrc Links NCBI RGD Ensembl Show fit	transferrin receptor
chr8_+_79660657 Show fit	0.01	ENSRNOT00000090970	Ccpg1 Links NCBI RGD Ensembl Show fit	cell cycle progression 1
chr10_-_56289882 Show fit	0.01	ENSRNOT00000090762 ENSRNOT00000056903	Tnfsf13 Links NCBI RGD Ensembl Show fit	tumor necrosis factor superfamily member 13
chr9_+_10428853 Show fit	0.01	ENSRNOT00000074253	Lonp1 Links NCBI RGD Ensembl Show fit	lon peptidase 1, mitochondrial
chrX_-_105417323 Show fit	0.01	ENSRNOT00000015494	Gla Links NCBI RGD Ensembl Show fit	galactosidase, alpha
chr14_+_84211600 Show fit	0.01	ENSRNOT00000005996	Pes1 Links NCBI RGD Ensembl Show fit	pescadillo ribosomal biogenesis factor 1
chr5_+_122100099 Show fit	0.01	ENSRNOT00000007738	Pde4b Links NCBI RGD Ensembl Show fit	phosphodiesterase 4B
chr7_+_29282305 Show fit	0.01	ENSRNOT00000007623	Arl1 Links NCBI RGD Ensembl Show fit	ADP-ribosylation factor like GTPase 1
chr18_-_57515834 Show fit	0.01	ENSRNOT00000026098	Adrb2 Links NCBI RGD Ensembl Show fit	adrenoceptor beta 2
chr20_-_27308069 Show fit	0.01	ENSRNOT00000056047	Slc25a16 Links NCBI RGD Ensembl Show fit	solute carrier family 25 member 16
chr6_-_77243677 Show fit	0.01	ENSRNOT00000011419	Mbip Links NCBI RGD Ensembl Show fit	MAP3K12 binding inhibitory protein 1
chr12_+_37444072 Show fit	0.01	ENSRNOT00000077380 ENSRNOT00000092699 ENSRNOT00000001373 ENSRNOT00000092416	Eif2b1 Links NCBI RGD Ensembl Show fit	eukaryotic translation initiation factor 2B subunit 1 alpha
chr1_-_199865548 Show fit	0.01	ENSRNOT00000027463	Tial1 Links NCBI RGD Ensembl Show fit	Tia1 cytotoxic granule-associated RNA binding protein-like 1
chr1_+_154377447 Show fit	0.01	ENSRNOT00000084268 ENSRNOT00000092086 ENSRNOT00000091470 ENSRNOT00000025415	Picalm Links NCBI RGD Ensembl Show fit	phosphatidylinositol binding clathrin assembly protein
chr18_-_27749235 Show fit	0.01	ENSRNOT00000026696	Hspa9 Links NCBI RGD Ensembl Show fit	heat shock protein family A member 9
chr20_+_28027054 Show fit	0.01	ENSRNOT00000071386 ENSRNOT00000001044	Ranbp2 Links NCBI RGD Ensembl Show fit	RAN binding protein 2
chr6_+_52751106 Show fit	0.01	ENSRNOT00000014373	Twistnb Links NCBI RGD Ensembl Show fit	TWIST neighbor
chr1_+_167538263 Show fit	0.01	ENSRNOT00000074058	Rrm1 Links NCBI RGD Ensembl Show fit	ribonucleotide reductase catalytic subunit M1
chr12_-_50383496 Show fit	0.01	ENSRNOT00000000831	Tpst2 Links NCBI RGD Ensembl Show fit	tyrosylprotein sulfotransferase 2
chr6_-_50943488 Show fit	0.01	ENSRNOT00000068419	Dus4l Links NCBI RGD Ensembl Show fit	dihydrouridine synthase 4-like
chr1_-_189666440 Show fit	0.01	ENSRNOT00000019167	Dcun1d3 Links NCBI RGD Ensembl Show fit	defective in cullin neddylation 1 domain containing 3
chr8_+_104040934 Show fit	0.01	ENSRNOT00000081204	Tfdp2 Links NCBI RGD Ensembl Show fit	transcription factor Dp-2
chr5_+_144779681 Show fit	0.00	ENSRNOT00000016493	LOC100294508 Links NCBI RGD Ensembl Show fit	dyslexia susceptibility 2-like
chr5_-_151072766 Show fit	0.00	ENSRNOT00000078048 ENSRNOT00000017227 ENSRNOT00000085573	Stx12 Links NCBI RGD Ensembl Show fit	syntaxin 12
chr2_-_196456481 Show fit	0.00	ENSRNOT00000028677	Prune Links NCBI RGD Ensembl Show fit	prune exopolyphosphatase
chr8_+_117280705 Show fit	0.00	ENSRNOT00000085038	Usp19 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 19
chr20_-_32115310 Show fit	0.00	ENSRNOT00000067883 ENSRNOT00000081916	Vps26a Links NCBI RGD Ensembl Show fit	VPS26 retromer complex component A
chr12_+_11179329 Show fit	0.00	ENSRNOT00000001302	Zfp394 Links NCBI RGD Ensembl Show fit	zinc finger protein 394
chr14_-_86706626 Show fit	0.00	ENSRNOT00000082893	H2afv Links NCBI RGD Ensembl Show fit	H2A histone family, member V
chr2_-_232178533 Show fit	0.00	ENSRNOT00000082173 ENSRNOT00000055607	Ap1ar Links NCBI RGD Ensembl Show fit	adaptor-related protein complex 1 associated regulatory protein
chr17_+_26808330 Show fit	0.00	ENSRNOT00000022108	Bloc1s5 Links NCBI RGD Ensembl Show fit	biogenesis of lysosomal organelles complex 1 subunit 5
chr7_-_29282039 Show fit	0.00	ENSRNOT00000067777	RGD1561102 Links NCBI RGD Ensembl Show fit	similar to ribosomal protein S12
chr5_+_157848206 Show fit	0.00	ENSRNOT00000039663 ENSRNOT00000082138	Ubr4 Links NCBI RGD Ensembl Show fit	ubiquitin protein ligase E3 component n-recognin 4
chr5_-_173098816 Show fit	0.00	ENSRNOT00000023696	Mib2 Links NCBI RGD Ensembl Show fit	mindbomb E3 ubiquitin protein ligase 2
chr20_-_5455632 Show fit	0.00	ENSRNOT00000000552	Wdr46 Links NCBI RGD Ensembl Show fit	WD repeat domain 46
chr15_-_19733967 Show fit	0.00	ENSRNOT00000012036	Gnpnat1 Links NCBI RGD Ensembl Show fit	glucosamine-phosphate N-acetyltransferase 1
chr1_+_127802978 Show fit	0.00	ENSRNOT00000055877	Adamts17 Links NCBI RGD Ensembl Show fit	ADAM metallopeptidase with thrombospondin type 1 motif, 17
chr7_-_120780108 Show fit	0.00	ENSRNOT00000018185	Ddx17 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 17
chr6_+_96871625 Show fit	0.00	ENSRNOT00000012361	Snapc1 Links NCBI RGD Ensembl Show fit	small nuclear RNA activating complex, polypeptide 1
chr10_-_38642397 Show fit	0.00	ENSRNOT00000023628	Hspa4 Links NCBI RGD Ensembl Show fit	heat shock protein family A member 4
chr10_+_86724427 Show fit	0.00	ENSRNOT00000013204	Casc3 Links NCBI RGD Ensembl Show fit	cancer susceptibility candidate 3
chr10_+_90230711 Show fit	0.00	ENSRNOT00000055185	Tmub2 Links NCBI RGD Ensembl Show fit	transmembrane and ubiquitin-like domain containing 2
chr10_+_83636518 Show fit	0.00	ENSRNOT00000007352	Phospho1 Links NCBI RGD Ensembl Show fit	phosphoethanolamine/phosphocholine phosphatase 1
chr10_+_97647111 Show fit	0.00	ENSRNOT00000055062	Gna13 Links NCBI RGD Ensembl Show fit	G protein subunit alpha 13
chr14_+_2100106 Show fit	0.00	ENSRNOT00000000064	Gak Links NCBI RGD Ensembl Show fit	cyclin G associated kinase
chr8_+_61080103 Show fit	0.00	ENSRNOT00000022976	Hmg20a Links NCBI RGD Ensembl Show fit	high mobility group 20A
chr1_+_189665976 Show fit	0.00	ENSRNOT00000033673	Lyrm1 Links NCBI RGD Ensembl Show fit	LYR motif containing 1
chr9_+_114022137 Show fit	0.00	ENSRNOT00000007657	Map3k7 Links NCBI RGD Ensembl Show fit	mitogen activated protein kinase kinase kinase 7
chr20_-_32080088 Show fit	0.00	ENSRNOT00000080773	Supv3l1 Links NCBI RGD Ensembl Show fit	Suv3 like RNA helicase
chr3_-_133131192 Show fit	0.00	ENSRNOT00000055630	Tasp1 Links NCBI RGD Ensembl Show fit	taspase 1
chrX_+_159703578 Show fit	0.00	ENSRNOT00000001162	Cd40lg Links NCBI RGD Ensembl Show fit	CD40 ligand
chr7_-_120780641 Show fit	0.00	ENSRNOT00000076164	Ddx17 Links NCBI RGD Ensembl Show fit	DEAD-box helicase 17
chr8_+_116054465 Show fit	0.00	ENSRNOT00000040056	Cish Links NCBI RGD Ensembl Show fit	cytokine inducible SH2-containing protein
chr11_-_31805728 Show fit	0.00	ENSRNOT00000032162	Gart Links NCBI RGD Ensembl Show fit	phosphoribosylglycinamide formyltransferase

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Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:0044837	assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) actomyosin contractile ring assembly(GO:0000915) actomyosin contractile ring organization(GO:0044837)