GSE49485: Hypoxia transcriptome sequencing of rat brain.

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Expression table
• Download the whole report

Gene Symbol	Gene ID	Gene Info
Gata6 Links NCBI RGD Ensembl	ENSRNOG00000023433	GATA binding protein 6

Gene	Promoter	Pearson corr. coef.	P-value	Plot
Gata6	rn6_v1_chr18_+_2416552_2416552	-0.96	1.0e-02	Click!

Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr1_+_199720038 Show fit	0.05	ENSRNOT00000027297	Ahsp Links NCBI RGD Ensembl Show fit	alpha hemoglobin stabilizing protein
chr1_+_279798187 Show fit	0.04	ENSRNOT00000024065	Pnlip Links NCBI RGD Ensembl Show fit	pancreatic lipase
chr6_+_27328406 Show fit	0.03	ENSRNOT00000091159 ENSRNOT00000044278	Otof Links NCBI RGD Ensembl Show fit	otoferlin
chr1_-_261446570 Show fit	0.02	ENSRNOT00000020182	Sfrp5 Links NCBI RGD Ensembl Show fit	secreted frizzled-related protein 5
chr8_+_50525091 Show fit	0.02	ENSRNOT00000074357	Apoa1 Links NCBI RGD Ensembl Show fit	apolipoprotein A1
chr4_-_50312608 Show fit	0.02	ENSRNOT00000010019	Fezf1 Links NCBI RGD Ensembl Show fit	Fez family zinc finger 1
chr19_-_14945302 Show fit	0.02	ENSRNOT00000079391	AABR07042936.2 Links NCBI RGD Ensembl Show fit
chr11_-_35749464 Show fit	0.01	ENSRNOT00000078818 ENSRNOT00000078425	Erg Links NCBI RGD Ensembl Show fit	ERG, ETS transcription factor
chr1_+_175445088 Show fit	0.01	ENSRNOT00000036718	Adm Links NCBI RGD Ensembl Show fit	adrenomedullin
chr7_+_58814805 Show fit	0.01	ENSRNOT00000005909	Tspan8 Links NCBI RGD Ensembl Show fit	tetraspanin 8
chr2_-_77784522 Show fit	0.01	ENSRNOT00000030328	LOC310177 Links NCBI RGD Ensembl Show fit	similar to RIKEN cDNA 0610040D20
chr10_+_70262361 Show fit	0.01	ENSRNOT00000064625 ENSRNOT00000076973	Unc45b Links NCBI RGD Ensembl Show fit	unc-45 myosin chaperone B
chr4_+_119225040 Show fit	0.01	ENSRNOT00000012365	Bmp10 Links NCBI RGD Ensembl Show fit	bone morphogenetic protein 10
chr17_-_84247038 Show fit	0.01	ENSRNOT00000068553	Nebl Links NCBI RGD Ensembl Show fit	nebulette
chr7_+_11490852 Show fit	0.01	ENSRNOT00000044484	Creb3l3 Links NCBI RGD Ensembl Show fit	cAMP responsive element binding protein 3-like 3
chr2_-_100249811 Show fit	0.01	ENSRNOT00000086760	Hnf4g Links NCBI RGD Ensembl Show fit	hepatocyte nuclear factor 4, gamma
chr6_+_7961413 Show fit	0.01	ENSRNOT00000007638 ENSRNOT00000061871	Abcg8 Links NCBI RGD Ensembl Show fit	ATP binding cassette subfamily G member 8
chr19_+_27404712 Show fit	0.01	ENSRNOT00000023657	Mylk3 Links NCBI RGD Ensembl Show fit	myosin light chain kinase 3
chr16_-_49820235 Show fit	0.01	ENSRNOT00000029628	Sorbs2 Links NCBI RGD Ensembl Show fit	sorbin and SH3 domain containing 2
chr1_+_17602281 Show fit	0.01	ENSRNOT00000075461	LOC103690149 Links NCBI RGD Ensembl Show fit	jouberin-like
chr2_+_42726809 Show fit	0.00	ENSRNOT00000036860	AABR07008097.1 Links NCBI RGD Ensembl Show fit
chr10_-_15610826 Show fit	0.00	ENSRNOT00000027851	Hbz Links NCBI RGD Ensembl Show fit	hemoglobin subunit zeta
chr6_-_23291568 Show fit	0.00	ENSRNOT00000085708	Clip4 Links NCBI RGD Ensembl Show fit	CAP-GLY domain containing linker protein family, member 4
chr2_+_114423533 Show fit	0.00	ENSRNOT00000091221	Slc2a2 Links NCBI RGD Ensembl Show fit	solute carrier family 2 member 2
chr2_-_259382765 Show fit	0.00	ENSRNOT00000091407	St6galnac3 Links NCBI RGD Ensembl Show fit	ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
chr3_-_119247449 Show fit	0.00	ENSRNOT00000015238	Usp50 Links NCBI RGD Ensembl Show fit	ubiquitin specific peptidase 50
chr13_-_45040593 Show fit	0.00	ENSRNOT00000004908	Lct Links NCBI RGD Ensembl Show fit	lactase
chr7_-_82687130 Show fit	0.00	ENSRNOT00000006791	Tmem74 Links NCBI RGD Ensembl Show fit	transmembrane protein 74
chr9_-_88356716 Show fit	0.00	ENSRNOT00000077503	Col4a4 Links NCBI RGD Ensembl Show fit	collagen type IV alpha 4 chain

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Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0030492	hemoglobin binding(GO:0030492)