Project
GSE49485: Hypoxia transcriptome sequencing of rat brain.
Navigation
Downloads
Results for Gata5
Z-value: 0.44
Motif logo
Transcription factors associated with Gata5
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| Gata5 | rn6_v1_chr3_-_175709465_175709465 | -0.40 | 5.0e-01 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr1_-_164205222 Show fit | 0.22 |
ENSRNOT00000035774
|
monoacylglycerol O-acyltransferase 2 |
|
| chr1_-_213650247 Show fit | 0.20 |
ENSRNOT00000019679
|
cytochrome c oxidase, subunit VIIIb |
|
| chr3_+_138174054 Show fit | 0.17 |
ENSRNOT00000007946
|
barrier to autointegration factor 2 |
|
| chr1_-_155955173 Show fit | 0.14 |
ENSRNOT00000079345
|
|
|
| chr2_-_147819335 Show fit | 0.13 |
ENSRNOT00000057909
|
ankyrin repeat and ubiquitin domain containing 1 |
|
| chr7_+_121841855 Show fit | 0.11 |
ENSRNOT00000024673
|
GRB2-related adaptor protein 2 |
|
| chr10_-_38969501 Show fit | 0.10 |
ENSRNOT00000090691
ENSRNOT00000081309 ENSRNOT00000010029 |
interleukin 4 |
|
| chr13_-_82129989 Show fit | 0.10 |
ENSRNOT00000078963
|
|
|
| chr10_+_89539556 Show fit | 0.10 |
ENSRNOT00000028174
|
RAD52 motif containing 1 |
|
| chr10_-_102227554 Show fit | 0.10 |
ENSRNOT00000078035
|
|
Network of associatons between targets according to the STRING database.
First level regulatory network of Gata5
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.2 | GO:0006651 | diacylglycerol biosynthetic process(GO:0006651) |
| 0.0 | 0.2 | GO:0006123 | mitochondrial electron transport, cytochrome c to oxygen(GO:0006123) |
| 0.0 | 0.1 | GO:2000424 | T-helper 1 cell lineage commitment(GO:0002296) negative regulation of complement-dependent cytotoxicity(GO:1903660) regulation of eosinophil chemotaxis(GO:2000422) positive regulation of eosinophil chemotaxis(GO:2000424) |
| 0.0 | 0.1 | GO:0070949 | regulation of neutrophil mediated cytotoxicity(GO:0070948) regulation of neutrophil mediated killing of symbiont cell(GO:0070949) |
| 0.0 | 0.1 | GO:2000814 | positive regulation of barbed-end actin filament capping(GO:2000814) |
| 0.0 | 0.1 | GO:0046013 | regulation of T cell homeostatic proliferation(GO:0046013) |
| 0.0 | 0.1 | GO:0008292 | acetylcholine biosynthetic process(GO:0008292) acetate ester biosynthetic process(GO:1900620) |
| 0.0 | 0.0 | GO:0006059 | hexitol metabolic process(GO:0006059) |
| 0.0 | 0.0 | GO:0010903 | negative regulation of very-low-density lipoprotein particle remodeling(GO:0010903) |
| 0.0 | 0.0 | GO:0021526 | medial motor column neuron differentiation(GO:0021526) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:0005751 | mitochondrial respiratory chain complex IV(GO:0005751) |
| 0.0 | 0.1 | GO:0005947 | mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) |
| 0.0 | 0.1 | GO:0036195 | muscle cell projection(GO:0036194) muscle cell projection membrane(GO:0036195) |
| 0.0 | 0.1 | GO:0000220 | vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220) |
| 0.0 | 0.0 | GO:0045025 | mitochondrial degradosome(GO:0045025) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0003846 | 2-acylglycerol O-acyltransferase activity(GO:0003846) |
| 0.0 | 0.1 | GO:0005136 | interleukin-4 receptor binding(GO:0005136) |
| 0.0 | 0.1 | GO:0015321 | sodium-dependent phosphate transmembrane transporter activity(GO:0015321) |
| 0.0 | 0.1 | GO:0035650 | AP-1 adaptor complex binding(GO:0035650) |
| 0.0 | 0.0 | GO:0042895 | antibiotic transporter activity(GO:0042895) |
| 0.0 | 0.0 | GO:0070653 | high-density lipoprotein particle receptor binding(GO:0070653) |